Claire Kuchly

24
Documents
Affiliation actuelle
  • Génome et Transcriptome - Plateforme Génomique (GeT-PlaGe)

Publications

Publications

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Pig and quail CpG methylation datasets from short and long read sequencing technologies

Paul Terzian , Céline Vandecasteele , Joanna Lledo , Rémy-Félix Serre , Jules Sabban et al.
Scientific Data , 2025, 12 (1), pp.556. ⟨10.1038/s41597-025-04769-4⟩
Article dans une revue hal-05039144 v1
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Multi-genome comparisons reveal gain-and-loss evolution of anti-Mullerian hormone receptor type 2 as a candidate master sex-determining gene in Percidae

Heiner Kuhl , Peter Euclide , Christophe Klopp , Cédric Cabau , Margot Zahm et al.
BMC Biology, 2024, 22 (1), pp.141. ⟨10.1186/s12915-024-01935-9⟩
Article dans une revue hal-04638789 v1
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Massive detection of cryptic recessive genetic defects in dairy cattle mining millions of life histories

Florian Besnard , Ana Guintard , Cécile Grohs , Laurence Guzylack-Piriou , Margarita Cano et al.
Genome Biology, 2024, 25 (1), pp.248. ⟨10.1186/s13059-024-03384-7⟩
Article dans une revue hal-04714371 v1
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Large-scale detection and characterization of interchromosomal rearrangements in normozoospermic bulls using massive genotype and phenotype data sets

Jeanlin Jourdain , Harmonie Barasc , Thomas Faraut , Anne Calgaro , Nathalie Bonnet et al.
Genome Research, 2023, 33 (6), pp.957-971. ⟨10.1101/gr.277787.123⟩
Article dans une revue hal-04170739 v1
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A Bos taurus sequencing methods benchmark for assembly, haplotyping, and variant calling

Camille Eché , Carole Iampietro , Clément Birbes , Andreea Dréau , Claire Kuchly et al.
Scientific Data , 2023, 10 (1), pp.369. ⟨10.1038/s41597-023-02249-1⟩
Article dans une revue (data paper) hal-04122201 v1
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Comparison of two molecular barcodes for the study of equine strongylid communities with amplicon sequencing

Élise Courtot , Michel Boisseau , Sophie Dhorne-Pollet , Delphine Serreau , Amandine Gesbert et al.
PeerJ, 2023, 11, pp.e15124. ⟨10.7717/peerj.15124⟩
Article dans une revue hal-04078317 v1
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A supernumerary “B-sex” chromosome drives male sex determination in the Pachón cavefish, Astyanax mexicanus

Boudjema Imarazene , Kang Du , Séverine Beille , Elodie Jouanno , Romain Feron et al.
Current Biology, 2021, 31 (21), pp.4800-4809.e9. ⟨10.1016/j.cub.2021.08.030⟩
Article dans une revue hal-03337251 v1

Maintaining Two Mating Types: Structure of the Mating Type Locus and Its Role in Heterokaryosis in Podospora anserina

Pierre Grognet , Frédérique Bidard , Claire Kuchly , Laetitia Chan Ho Tong , Evelyne Coppin et al.
Genetics, 2014, 197 (1), pp.421-432. ⟨10.1534/genetics.113.159988⟩
Article dans une revue hal-03153569 v1

Genome-wide Translational Changes Induced by the Prion [PSI+]

Agnès Baudin-Baillieu , Rachel Legendre , Claire Kuchly , Isabelle Hatin , Stéphane Demais et al.
Cell Reports, 2014, 8 (2), pp.439-448. ⟨10.1016/j.celrep.2014.06.036⟩
Article dans une revue hal-04617983 v1

Detection of non-coding RNA in bacteria and archaea using the DETR'PROK Galaxy pipeline

Claire Toffano-Nioche , Yufei Luo , Claire Kuchly , Claire Wallon , Delphine D. Steinbach et al.
Methods, 2013, 63 (1), pp.60 - 65. ⟨10.1016/j.ymeth.2013.06.003⟩
Article dans une revue hal-02648776 v1
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Benchmarking of sequencing technologies for CpG methylation detection: applications to quail and pig

Céline Vandecasteele , Paul Terzian , Joanna Lledo , Rémy-Félix Serre , Jules Sabban et al.
London Calling 2024, May 2024, London, France
Poster de conférence hal-04638952 v1
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Major contribution to the bovine pangenome: whole genome sequences, SNPs, and structural variants of 154 bulls from 14 breeds

Amandine Suin , Camille Marcuzzo , Camille Eché , Andreea Dréau , Clément Birbes et al.
Plant and Genome San Diego 2024, Jan 2024, San Diego, United States
Poster de conférence hal-04432840 v1
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A Bos taurus sequencing methods benchmark for assembly, haplotyping, and variant calling

Camille Eché , Carole Iampietro , Clément Birbes , Andreea Dréau , Claire Kuchly et al.
Plant and Genome San Diego 2024, Jan 2024, San Diego (California), United States. 10, 2024
Poster de conférence hal-04432803 v1
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Volume reduction and automation of DNAprep libraries for low pass sequencing

Marcuzzo Camille , Cervin Guyomar , Amandine Suin , Adrien Castinel , Carole Iampietro et al.
Assemblée générale France Génomique, Jun 2023, Paris, France
Poster de conférence hal-04590691 v1
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Structural variants detection and de novo genome assembly of a maize line

Carole Iampietro , Camille Eché , Clément Birbes , Arnaud Di Franco , Andreea Dréau et al.
Plant & Animal Genome Conference (PAG) 2022, Jan 2022, San Diego, United States
Poster de conférence hal-03541379 v1
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Preliminary results from Nanopore Q20+ sequencing

Claire Kuchly , Jules Sabban , Eden Darnige , Camille Eché , Amandine Suin et al.
JOBIM 2022 : Journées Ouvertes Biologie Informatique Mathématiques, Jul 2022, RENNES, France. 2022
Poster de conférence hal-03719401 v1
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De novo assembly of 90 bovines genomes using PacBio CLR application comparison and optimization

Camille Marcuzzo , Amandine Suin , Camille Eché , Andreea Dreau , Clément Birbes et al.
Assemblée générale France Génomique, Jun 2022, Paris, France
Poster de conférence hal-04590746 v1
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Structural variants detection and de novo genome assembly of a Maize line

Camille Eché , Clement Birbes , Carole Iampietro , Arnaud Di Franco , Andreea Dreau et al.
SMRT Leiden 2021 – Young Investigator Virtual Conference, May 2021, virtuel, Netherlands
Poster de conférence hal-03541316 v1
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De novo assembling 19 maize inbred lines of the European germplasm

Carole Iampietro , Camille Eché , Clement Birbes , Andreea Dreau , Erwan Denis et al.
63rd Annual Maize Genetics Meeting, Mar 2021, virtuel, United States
Poster de conférence hal-03539396 v1
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De novo assembly of bovine genome using PacBio applications

Camille Eché , Clément Birbes , Carole Iampietro , Andreea Dréau , Claire Kuchly et al.
SMRT Leiden 2021 – Young Investigator Virtual Conference, May 2021, virtuel, Netherlands
Poster de conférence hal-03541224 v1
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A Long Read project to find optimal technologic combinations for genome assembly and variability, epigenetic marks detection and metagenomic analysis

Carole Iampietro , Camille Eché , Adrien Castinel , Rémy-Félix Serre , Christophe Klopp et al.
PAG XXVIII, Plant and Animal Genome, Jan 2020, San Diego, United States. 2020
Poster de conférence hal-02947690 v1
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Improvement of the Bos taurus Genome Assembly using New Sequencing Technologies

Camille Eché , Carole Iampietro , Clement Birbes , Andreea Dreau , Claire Kuchly et al.
Discoveries Roadshow 2023 - PacBio, PacBio, May 2023, Paris, France
Communication dans un congrès hal-04096124 v1

Dynamic stability of the cyathostomin – gut microbiota interactions in horses

Michel Boisseau , Sophie Dhorne-Pollet , David Bars , Elise Courtot , Delphine Serreau et al.
Journées d'Animation Scientifique de la FéRI 2022 - FéRi Scientific Days 2022, Fédération de Recherche en Infectiologie (FéRI), Centre Val de Loire, Jul 2022, Joué-Lès-Tours, France
Communication dans un congrès hal-03735407 v1