Cristian Chaparro

Bioinformaticien Laboratoire Interactions Hôte-Pathogènes-Environnement (IHPE) UMR5244
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Publications

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Transcriptomic plasticity in hybrid schistosomes can contribute to their zoonotic potential

Nelia Luviano Aparicio , Eglantine Mathieu-Bégné , Julien Kincaid-Smith , Olivier Rey , Marion A.L. Picard et al.

Philosophical Transactions of the Royal Society B: Biological Sciences, 2026, 381 (1941), pp.20240534. ⟨10.1098/rstb.2024.0534⟩

Article dans une revue hal-05469047v1
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Unveiling the hemolymphatic miRNome composition of the schistosomiasis vector snail Biomphalaria glabrata

Sarah Dametto , Benjamin Gourbal , Cristian Chaparro , Silvain Pinaud , David Duval

Current Research in Parasitology & Vector-Borne Diseases, 2025, 7, 100262 [14 p.]. ⟨10.1016/j.crpvbd.2025.100262⟩

Article dans une revue hal-05520725v1
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Introduction of epigenetic variation contribute to resistance against the human parasite Schistosoma mansoni

Nelia Luviano-Aparicio , Marie Lopez , Bart Haegeman , Pierick Mouginot , Cristian Chaparro et al.

Epigenetics & Chromatin, 2025, 18 (1), pp.43. ⟨10.1186/s13072-025-00607-4⟩

Article dans une revue hal-05172481v1
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Subtelomeric plasticity contributes to gene family expansion in the human parasitic flatworm Schistosoma mansoni

T Brann , A Beltramini , Cristian Chaparro , M Berriman , S R Doyle et al.

BMC Genomics, 2024, 25, pp.217. ⟨10.1186/s12864-024-10032-8⟩

Article dans une revue hal-04575780v1

Epigenetic memory of temperature sensed during somatic embryo maturation in 2-yr-old maritime pine trees

Jean-François Trontin , Mamadou Dia Sow , Alain Delaunay , Ines Modesto , Caroline Teyssier et al.

Plant Physiology, 2024, 197 (2), pp.kiae600. ⟨10.1093/plphys/kiae600⟩

Article dans une revue hal-04911770v1
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Schistosoma haematobium and Schistosoma bovis first generation hybrids undergo gene expressions changes consistent with species compatibility and heterosis

Eglantine Mathieu-Bégné , Julien Kincaid-Smith , Cristian Chaparro , Jean-François Allienne , Olivier REY et al.

PLoS Neglected Tropical Diseases, 2024, 18 (7), pp.e0012267. ⟨10.1371/journal.pntd.0012267⟩

Article dans une revue hal-04639136v1
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Transcriptomic responses of Antarctic clam Laternula elliptica to nanoparticles, at single and combined exposures reveal ecologically relevant biomarkers

Rodolfo Rondon , Catalina Valdés , Celine Cosseau , Elisa Bergami , César Antonio Cárdenas et al.

Ecotoxicology and Environmental Safety, 2024, 280, pp.116523. ⟨10.1016/j.ecoenv.2024.116523⟩

Article dans une revue hal-04615510v1
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Combining a transcriptomic approach and a targeted metabolomics approach for deciphering the molecular bases of compatibility phenotype in the snail Biomphalaria glabrata toward Schistosoma mansoni.

Elodie Simphor , Anne Rognon , Emmanuel Vignal , Sylvain Henry , Jean-François Allienne et al.

Acta Tropica, 2024, 255, pp.107212. ⟨10.1016/j.actatropica.2024.107212⟩

Article dans une revue hal-04555554v1
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Targeted insertion and reporter transgene activity at a gene safe harbor of the human blood fluke, Schistosoma mansoni

Wannaporn Ittiprasert , Max F Moescheid , Cristian Chaparro , Victoria H Mann , Rutchanee Rodpai et al.

Cell Reports Methods, 2023, 3 (7), pp.100535. ⟨10.1016/j.crmeth.2023.100535⟩

Article dans une revue hal-04181018v1
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Cooperation and cheating orchestrate Vibrio assemblages and polymicrobial synergy in oysters infected with OsHV-1 virus

Daniel Oyanedel , Arnaud Lagorce , Maxime Bruto , Philippe Haffner , Amandine Morot et al.

Proceedings of the National Academy of Sciences of the United States of America, 2023, 120 (40), pp.e2305195120. ⟨10.1073/pnas.2305195120⟩

Article dans une revue hal-04219877v1
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Hit-and-Run Epigenetic Editing for Vectors of Snail-Borne Parasitic Diseases

Nelia Luviano , David Duval , Wannaporn Ittiprasert , Jean-François Allienne , Geneviève Tavernier et al.

Frontiers in Cell and Developmental Biology, 2022, 10, pp.794650. ⟨10.3389/fcell.2022.794650⟩

Article dans une revue hal-03608918v1
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From methylome to integrative analysis of tissue specificity

Thomas Duge de Bernonville , Christian Daviaud , Cristian Chaparro , Jörg Tost , Stéphane Maury

Methods in Molecular Biology, 2022, Catharanthus roseus Methods and Protocols, 2505, pp.223-240. ⟨10.1007/978-1-0716-2349-7_16⟩

Article dans une revue cea-04346942v1
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Single cell RNA sequencing reveals hemocyte heterogeneity in Biomphalaria glabrata: Plasticity over diversity

Remi Pichon , Silvain Pinaud , Emmanuel Vignal , Cristian Chaparro , Marine Pratlong et al.

Frontiers in Immunology, 2022, 13, pp.956871. ⟨10.3389/fimmu.2022.956871⟩

Article dans une revue hal-03772193v1
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Automated ChIPmentation procedure on limited biological material of the human blood fluke Schistosoma mansoni

Chrystelle Lasica , Ronaldo de Carvalho Augusto , Hélène Moné , Gabriel Mouahid , Cristian Chaparro et al.

Wellcome Open Research, 2022, 7, pp.133. ⟨10.12688/wellcomeopenres.17779.1⟩

Article dans une revue hal-03255320v2
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Early life microbial exposures shape the Crassostrea gigas immune system for lifelong and intergenerational disease protection

Manon Fallet , C. Montagnani , Bruno Petton , Luc Dantan , Julien de Lorgeril et al.

Microbiome, 2022, 10, pp.85. ⟨10.1186/s40168-022-01280-5⟩

Article dans une revue hal-03635473v2
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New insights into biomphalysin gene family diversification in the vector snail Biomphalaria glabrata

Silvain Pinaud , Guillaume Tetreau , Pierre Poteaux , Richard Galinier , Cristian Chaparro et al.

Frontiers in Immunology, 2021, 12, pp.635131. ⟨10.3389/fimmu.2021.635131⟩

Article dans une revue hal-03219003v1
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RNAi suppression of DNA methylation affects the drought stress response and genome integrity in transgenic poplar

Mamadou D. Sow , Anne‐laure Le Gac , Régis Fichot , Sophie Lanciano , Alain Delaunay et al.

New Phytologist, 2021, 232 (1), pp.80-97. ⟨10.1111/nph.17555⟩

Article dans une revue hal-03292338v1
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The methylome of Biomphalaria glabrata and other mollusks: enduring modification of epigenetic landscape and phenotypic traits by a new DNA methylation inhibitor

Nelia Luviano , Marie Lopez , Fleur Gawehns , Cristian Chaparro , Paola B Arimondo et al.

Epigenetics & Chromatin, 2021, 14 (1), pp.48. ⟨10.1186/s13072-021-00422-7⟩

Article dans une revue pasteur-03427775v2
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No pre-zygotic isolation mechanisms between Schistosoma haematobium and Schistosoma bovis parasites: From mating interactions to differential gene expression

Julien Kincaid-Smith , Eglantine Mathieu-Bégné , Cristian Chaparro , Marta Reguera-Gomez , Stephen Mulero et al.

PLoS Neglected Tropical Diseases, 2021, 15 (5), pp.e0009363. ⟨10.1371/journal.pntd.0009363⟩

Article dans une revue hal-03255515v1
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Satellite-like W Elements: repetitive, transcribed, and putative mobile genetic factors with potential roles for biology and evolution of Schistosoma mansoni

Maria Stitz , Cristian Chaparro , Zhigang Lu , V Janett Janett Olzog , Christina E Weinberg et al.

Genome Biology and Evolution, 2021, 13 (10), pp.evab204. ⟨10.1093/gbe/evab204⟩

Article dans une revue hal-03333536v1
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A simple ATAC-seq protocol for population epigenetics

Ronaldo de Carvalho Augusto , Olivier REY , Céline Cosseau , Cristian Chaparro , Jeremie Vidal-Dupiol et al.

Wellcome Open Research, 2021, 5, pp.121. ⟨10.12688/wellcomeopenres.15552.2⟩

Article dans une revue hal-03145575v2
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Diverging patterns of introgression from Schistosoma bovis across S. haematobium African lineages

Olivier REY , Eve Toulza , Jérôme Boissier , Cristian Chaparro , Jean-François Allienne et al.

PLoS Pathogens, 2021, 17 (2), pp.e1009313. ⟨10.1371/journal.ppat.1009313⟩

Article dans une revue hal-03176500v1
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Morphological and genomic characterisation of the Schistosoma hybrid infecting humans in Europe reveals admixture between Schistosoma haematobium and Schistosoma bovis

Julien Kincaid-Smith , Alan Tracey , Ronaldo de Carvalho Augusto , Ingo Bulla , Nancy Holroyd et al.

PLoS Neglected Tropical Diseases, 2021, 15 (12), pp.e0010062. ⟨10.1371/journal.pntd.0010062⟩

Article dans une revue hal-03508340v2
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Developmental Methylome of the Medicinal Plant Catharanthus roseus Unravels the Tissue-Specific Control of the Monoterpene Indole Alkaloid Pathway by DNA Methylation

Thomas Dugé de Bernonville , Stéphane Maury , Alain Delaunay , Christian Daviaud , Cristian Chaparro et al.

International Journal of Molecular Sciences, 2020, 21 (17), ⟨10.3390/ijms21176028⟩

Article dans une revue hal-02957413v1
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A Sustained Immune Response Supports Long-Term Antiviral Immune Priming in the Pacific Oyster, Crassostrea gigas

Maxime Lafont , Agnès Vergnes , Jeremie Vidal-Dupiol , Julien de Lorgeril , Yannick Guéguen et al.

mBio, 2020, 11 (2), pp.e02777-19. ⟨10.1128/mBio.02777-19⟩

Article dans une revue hal-02527469v1
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Contribution of Viral Genomic Diversity to Oyster Susceptibility in the Pacific Oyster Mortality Syndrome

Jean Delmotte , Cristian Chaparro , Richard Galinier , Julien de Lorgeril , Bruno Petton et al.

Frontiers in Microbiology, 2020, 11, pp.1579. ⟨10.3389/fmicb.2020.01579⟩

Article dans une revue hal-02915023v1
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Natural resistance to Fasciola hepatica (Trematoda) in Pseudosuccinea columella snails: A review from literature and insights from comparative “omic” analyses

Annia Alba , Guillaume Tetreau , Cristian Chaparro , Jorge Sánchez , Antonio Vázquez et al.

Developmental and Comparative Immunology, 2019, 101, pp.103463. ⟨10.1016/j.dci.2019.103463⟩

Article dans une revue hal-02279394v1
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On the Importance to Acknowledge Transposable Elements in Epigenomic Analyses

Emmanuelle Lerat , Josep Casacuberta , Cristian Chaparro , Cristina Vieira

Genes, 2019, 10 (4), pp.258. ⟨10.3390/genes10040258⟩

Article dans une revue hal-02093613v1
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Sympatric versus allopatric evolutionary contexts shape differential immune response in Biomphalaria / Schistosoma interaction

Anaïs Portet , Silvain Pinaud , Cristian Chaparro , Richard Galinier , Nolwenn M. Dheilly et al.

PLoS Pathogens, 2019, 15 (3), pp.e1007647. ⟨10.1371/journal.ppat.1007647⟩

Article dans une revue hal-02076267v1
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Species-specific mechanisms of cytotoxicity toward immune cells determine the successful outcome of Vibrio infections

Tristan Rubio , Daniel Oyanedel , Yannick Labreuche , Eve Toulza , Xing Luo et al.

Proceedings of the National Academy of Sciences of the United States of America, 2019, 116 (28), pp.14238-14247. ⟨10.1073/pnas.1905747116⟩

Article dans une revue hal-02163271v1
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The phylogeny of the genus Indoplanorbis (Gastropoda, Planorbidae) from Africa and the French West Indies

Gabriel Mouahid , Camille Clerissi , Jean-François Allienne , Cristian Chaparro , Salem Al Yafae et al.

Zoologica Scripta, 2018, 47 (5), pp.558-564. ⟨10.1111/zsc.12297⟩

Article dans une revue hal-01838840v1
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Immune-suppression by OsHV-1 viral infection causes fatal bacteraemia in Pacific oysters

Julien de Lorgeril , Aude Lucasson , Bruno Petton , Eve Toulza , Caroline Montagnani et al.

Nature Communications, 2018, 9 (1), pp.4215. ⟨10.1038/s41467-018-06659-3⟩

Article dans une revue hal-01898110v1
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Histone methylation changes are required for life cycle progression in the human parasite Schistosoma mansoni

David Roquis , Aaron Taudt , Kathrin P Geyer , Gilda Padalino , Karl F Hoffmann et al.

PLoS Pathogens, 2018, 14 (5), pp.e1007066. ⟨10.1371/journal.ppat.1007066⟩

Article dans une revue hal-01808531v1
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Notos -a galaxy tool to analyze CpN observed expected ratios for inferring DNA methylation types

Ingo Bulla , Benoît Aliaga , Virginia Lacal , Jan Bulla , Christoph Grunau et al.

BMC Bioinformatics, 2018, 19, pp.105. ⟨10.1186/s12859-018-2115-4⟩

Article dans une revue hal-01746203v1
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The anti-fecundity effect of 5-azacytidine (5-AzaC) on Schistosoma mansoni is linked to dis-regulated transcription, translation and stem cell activities

Kathrin P Geyer , Sabrina P Munshi , Martin Vickers , Michael Squance , Toby Wilkinson et al.

International journal for parasitology. Drugs and drug resistance, 2018, 8 (2), pp.213 - 222. ⟨10.1016/j.ijpddr.2018.03.006⟩

Article dans une revue hal-01887430v1
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Effects of a parental exposure to diuron on Pacific oyster spat methylome

Rodolfo Rondon , Christoph Grunau , Manon Fallet , Nicolas Charlemagne , Rossana Sussarellu et al.

Environmental Epigenetics, 2017, 3 (1), pp.dvx004. ⟨10.1093/eep/dvx004⟩

Article dans une revue hal-01511486v1
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A multistrain approach to studying the mechanisms underlying compatibility in the interaction between Biomphalaria glabrata and Schistosoma mansoni

Richard Galinier , Emmanuel Roger , Yves Moné , David Duval , Anaïs Portet et al.

PLoS Neglected Tropical Diseases, 2017, 11 (3), pp.e0005398. ⟨10.1371/journal.pntd.0005398.s005⟩

Article dans une revue hal-01511153v1
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Frequency and mitotic heritability of epimutations in Schistosoma mansoni

David Roquis , Anne Rognon , Cristian Chaparro , Jérôme Boissier , Nathalie Arancibia et al.

Molecular Ecology, 2016, EPIGENETIC STUDIES IN ECOLOGY AND EVOLUTION, 25 (8), pp.1741-1758. ⟨10.1111/mec.13555⟩

Article dans une revue hal-01311089v1
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Terminal-repeat Retrotransposons with GAG domain (TR-GAG) in plant genomes: A new testimony on the complex world of transposable elements

Cristian Chaparro , Thomas Gayraud , Rogerio Fernandes de Souza , Douglas Silva Domingues , Sélastique Doffou Akaffou et al.

Genome Biology and Evolution, 2015, 7 (2), pp.493-504. ⟨10.1093/gbe/evv001⟩

Article dans une revue hal-01162666v2
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Abiotic stress and genome dynamics: specific genes and transposable elements response to iron excess in rice

Taciane Finatto , Antonio Costa de Oliveira , Cristian Chaparro , L.C. da Maia , D.R. Farias et al.

Rice, 2015, 8, pp.13. ⟨10.1186/s12284-015-0045-6⟩

Article dans une revue hal-01162622v1

Use of Next Generation Sequencing (NGS) Technologies for the Genome-Wide Detection of Transposition

Moaine Elbaidouri , Cristian Chaparro , Olivier Panaud

Methods in Molecular Biology, 2013, pp.265-274. ⟨10.1007/978-1-62703-568-2_19⟩

Article dans une revue hal-02102445v1
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XRN4 and LARP1 are required for a heat-triggered mRNA decay pathway involved in plant acclimation and survival during thermal stress.

Rémy Merret , Julie Descombin , Yu-Ting Juan , Jean-Jacques Favory , Marie-Christine Carpentier et al.

Cell Reports, 2013, 5 (5), pp.1279-93. ⟨10.1016/j.celrep.2013.11.019⟩

Article dans une revue hal-01217835v1
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Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida.

Jonas Collén , Betina Porcel , Wilfrid Carré , Steven G Ball , Cristian Chaparro et al.

Proceedings of the National Academy of Sciences of the United States of America, 2013, 110 (13), pp.5247-52. ⟨10.1073/pnas.1221259110⟩

Article dans une revue hal-01073830v1

Transpositional landscape of the rice genome revealed by paired-end mapping of high-throughput re-sequencing data

Francois Sabot , Nathalie Picault , Moaine El-Baidouri , Christel Llauro , Cristian Chaparro et al.

The Plant Journal, 2011, 66 (2), pp.241-246. ⟨10.1111/j.1365-313X.2011.04492.x⟩

Article dans une revue hal-02114338v1
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Long-Range and Targeted Ectopic Recombination between the Two Homeologous Chromosomes 11 and 12 in Oryza Species

J. Jacquemin , C. Chaparro , M. Laudie , Arjan Berger , Frédérick F. Gavory et al.

Molecular Biology and Evolution, 2011, 28 (11), pp.3139-3150. ⟨10.1093/molbev/msr144⟩

Article dans une revue hal-02114343v1
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Double-stranded RNA binding proteins DRB2 and DRB4 have an antagonistic impact on polymerase IV-dependent siRNA levels in Arabidopsis

Thierry Pelissier , Marion Clavel , Cristian Chaparro , Marie-Noelle Pouch-Pelissier , Herve Vaucheret et al.

RNA, 2011, 17 (8), pp.1502 - 1510. ⟨10.1261/rna.2680711⟩

Article dans une revue hal-01190246v1

The genome of Theobroma cacao.

Xavier Argout , Jerome Salse , Jean-Marc Aury , Mark J Guiltinan , Gaetan Droc et al.

Nature Genetics, 2011, 43 (2), pp.101-8. ⟨10.1038/ng.736⟩

Article dans une revue hal-00855922v1

Paleogenomic analysis of the short arm of chromosome 3 reveals the history of the African and Asian progenitors of cultivated rices.

Anne Roulin , Cristian Chaparro , Benoit Piegu , Scott Jackson , Olivier Panaud

Genome Biology and Evolution, 2010, 2, pp.132-9. ⟨10.1093/gbe/evq005⟩

Article dans une revue hal-00787403v1
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Detailed analysis of a contiguous 22-Mb region of the maize genome.

Fusheng Wei , Joshua C Stein , Chengzhi Liang , Jianwei Zhang , Robert S Fulton et al.

PLoS Genetics, 2009, 5 (11), pp.e1000728. ⟨10.1371/journal.pgen.1000728⟩

Article dans une revue hal-00736698v1
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Exceptional diversity, non-random distribution, and rapid evolution of retroelements in the B73 maize genome.

Regina S Baucom , James C Estill , Cristian Chaparro , Naadira Upshaw , Ansuya Jogi et al.

PLoS Genetics, 2009, 5 (11), pp.e1000732. ⟨10.1371/journal.pgen.1000732⟩

Article dans une revue hal-00736178v1

Identification of an active LTR retrotransposon in rice.

Nathalie Picault , Cristian Chaparro , Cristel Llauro , Benoit Piegu , Willfried Stenger et al.

The Plant Journal, 2009, 58 (5), pp.754-65. ⟨10.1111/j.1365-313X.2009.03813.x⟩

Article dans une revue hal-00685656v1
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The B73 maize genome: complexity, diversity, and dynamics.

Patrick S Schnable , Doreen Ware , Robert S Fulton , Joshua C Stein , Fusheng Wei et al.

Science, 2009, 326 (5956), pp.1112-5. ⟨10.1126/science.1178534⟩

Article dans une revue hal-00751527v1

The Rice Annotation Project Database (RAP-DB): 2008 update.

Tsuyoshi Tanaka , Baltazar A Antonio , Shoshi Kikuchi , Takashi Matsumoto , Yoshiaki Nagamura et al.

Nucleic Acids Research, 2008, 36 (Database issue), pp.D1028-33. ⟨10.1093/nar/gkm978⟩

Article dans une revue hal-00300215v1

Spip and Squiq, two novel rice non-autonomous LTR retro-element families related to RIRE3 and RIRE8

Clémentine Vitte , Cristian Chaparro , Hadi H. Quesneville , Olivier Panaud

Plant Science, 2007, 172 (1), pp.8-19. ⟨10.1016/j.plantsci.2006.07.008⟩

Article dans une revue istex hal-02114377v1

RetrOryza: a database of the rice LTR-retrotransposons.

Cristian Chaparro , Romain Guyot , Andrea Zuccolo , Benoit Piegu , Olivier Panaud

Nucleic Acids Research, 2007, 35 (Database issue), pp.D66-70. ⟨10.1093/nar/gkl780⟩

Article dans une revue hal-00164403v1

Deciphering the molecular dialogue between the trematode parasite Schistosoma mansoni and its intermediate host snail Biomphalaria glabrata

Sarah Dametto , David Duval , Benjamin Gourbal , Cristian Chaparro

REID 2025 : Réseau Ecologie des Interactions Durables, Réseau Ecologie des Interactions Durables, May 2025, Lyon, France

Communication dans un congrès hal-05090512v1

Exploring the diversity and evolution of a multigenic family of proteins involved in invertebrate immune response

Cyril Guillemot , Richard Galinier , Jean-François Allienne , Anne Rognon , Cristian Chaparro et al.

8e rencontres Bioinformatiques, IFREMER, Sep 2025, Sète, France

Communication dans un congrès hal-05307747v1

Unveiling the mysteries of mollusk epigenetics: a multiOmics approach to study the chromatin structure of the Pacific oyster Magallana gigas

Amélie Dellong , Francesco Calzaferri , Jean-François Allienne , Juliette Pouzadoux , Alejandro Valdivieso et al.

EPIMAR 2025, May 2025, Barcelone, Spain

Communication dans un congrès hal-05090427v1

Rendre MOFA accessible sous GALAXY

Anaïs Bugnard , Cristian Chaparro

Workshop Biologie des Systèmes/Intégration des données, UMR5244 IHPE, Jun 2024, Perpignan, France

Communication dans un congrès hal-04893858v1

Early life microbial exposures shape the Crassostrea gigas immune system for lifelong and intergenerational disease protection

Manon Fallet , C. Montagnani , Luc Dantan , Bruno Petton , Julien de Lorgeril et al.

Forum Labex TULIP, Labex TULIP, Nov 2022, Toulouse, France

Communication dans un congrès hal-04886617v1

Temperature-induced masculinisation of Nile tilapia: effects seen in the adult gonad

H. d'Cotta , R. Sissao , L. Rebordinos , Christoph Grunau , K. Belkhir et al.

14ht International Congress in the Biology of Fish, American Fisheries Society, Jun 2022, Montpellier, France

Communication dans un congrès hal-03976732v1

Temperature-induced Masculinisation of Nile Tilapia: Effects seen in the Adult Gonad

Helena d'Cotta , Rokyatou Sissao , Laureana Rebordinos , Christoph Grunau , Khalid Belkhir et al.

International Congress on The Biology of Fish (ICBF), The American Fisheries Society; Centre of Marine Biodiversity Exploitation and Conservation, Jun 2022, Montpellier, France. 1 p

Communication dans un congrès hal-05182866v1

Early life microbial exposures shape the Crassostrea gigas immune system for lifelong and intergenerational disease protection

Manon Fallet , C. Montagnani , Luc Dantan , Bruno Petton , Julien de Lorgeril et al.

6th International Symposium on Genomics in Aquaculture GIA 2022, May 2022, Grenade, Spain

Communication dans un congrès hal-04886439v1
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New insights into the role of DNA methylation in Biomphalaria glabrata infection susceptibility

Nelia Luviano , Marie Lopez , Fleur Gawehns , Cristian Chaparro , Paola B Arimondo et al.

XVI Symposium on Schistosomiasis, FIOCRUZ, Nov 2022, Ouro Preto, Brazil

Communication dans un congrès hal-03963335v1

Genotype-by-temperature interaction in shaping the male phenotype of Nile Tilapia: Epigenetic a transcriptome responses in adult gonads

Helena d'Cotta , Rokyatou Sissao , Laureana Rebordinos , Christoph Grunau , Khalid Belkhir et al.

European Symposium on Sex Determination in Vertebrates (ESSDV), Oct 2022, Giens, France. 1 p

Communication dans un congrès hal-05182868v1

Early life microbial exposures shape the Crassostrea gigas immune system for lifelong and intergenerational disease protection

Manon Fallet , C. Montagnani , Luc Dantan , Bruno Petton , Julien de Lorgeril et al.

MicrobiOccitanie 3e rencontre des laboratoires de microbiologie de la région Occitanie, Réseau des laboratoires de microbiologie de la région Occitanie, Jul 2022, Toulouse, France

Communication dans un congrès hal-04886721v1

Are cercarial emergence rhythms of the diurnal and nocturnal chronotypes of the parasite Schistosoma mansoni circadian ?

Chrystelle Lasica , Gabriel Mouahid , Chevalier F. , Winka Le Clec’h , Cristian Chaparro et al.

15th International Conference on Molecular Epidemiology and Evolutionary Genetics of Infectious Diseases (MEEGID), Nov 2021, Online, United States

Communication dans un congrès hal-03428124v1

A Single Cell RNA sequencing approach to characterize Biomphalaria glabrata hemocyte responses in innate immune memory process

Remi Pichon , Silvain Pinaud , Maud Laffitte , Cristian Chaparro , Emmanuel Vignal et al.

2021 International Congress on Invertebrate Pathology & Microbial Control + 53rd Annual Meeting of the SIP (Society for Invertebrate Pathology), Society for Invertebrate Pathology, Jun 2021, Online, France

Communication dans un congrès hal-04888716v1

Microbiota induced epigenetic memory shapes Crassostrea gigas for a lifelong and intergenerational immune protection

Manon Fallet , C. Montagnani , Bruno Petton , Julien de Lorgeril , Sébastien Comarmond et al.

Colloque GDR3E/REACTION Epigénétique en Ecologie, Evolution, Agronomie et Environnement, GDR3E : "Epigénétique en Ecologie et Evolution »; REacTION : "Réseau d'échange sur les mécanismes Épigénétiques, Oct 2021, Montpellier, France

Communication dans un congrès hal-04888190v1

The WEome of Schistosoma mansoni – a non-coding DNA resource shaping schistosome biology, variability, and evolution?

M. Stitz , Cristian Chaparro , Z Lu , Vj Olzog , Ce Weinberg et al.

BSP (British Society for Parasitology) Parasites online, British Society for Parasitology, Jun 2021, Online, France

Communication dans un congrès hal-04888550v1

Epigenetic and metabolomic changes in hemocytes underlie innate immune memory in the vector snail Biomphalaria glabrata

Remi Pichon , Silvain Pinaud , Manon Fallet , Celine Cosseau , Cristian Chaparro et al.

2021 International Congress on Invertebrate Pathology & Microbial Control + 53rd Annual Meeting of the SIP (Society for Invertebrate Pathology), Society for Invertebrate Pathology, Jun 2021, Online, France

Communication dans un congrès hal-04888598v1

Transgenerational response to early microbial exposure in the oyster Crassostrea gigas and positive impact on survival capacities to juvenile mortality syndrome

Manon Fallet , Bruno Petton , Julien de Lorgeril , Sébastien Comarmond , Cristian Chaparro et al.

REID + Immuninv 2019, Réseau Ecologie des Interactions Durables; Réseau Immunité des Invertébrés, May 2019, Montpellier, France

Communication dans un congrès hal-04890548v1

L’élimination des hémocytes détermine le succès parasitaire des Vibrio pathogènes de l’huitre Crassostrea gigas

Tristan Rubio , Daniel Oyanedel Trigo , Yannick Labreuche , Eve Toulza , Xiaoliang Luo et al.

REID + Immuninv 2019, Réseau Ecologie des Interactions Durables; Réseau Immunité des Invertébrés, May 2019, Montpellier, France

Communication dans un congrès hal-04890464v1

Transgenerational response to early microbial exposure in the oyster Crassostrea gigas and positive impact on survival capacities to juvenile mortality syndrome

Manon Fallet , Caroline Montagnani , Bruno Petton , Julien de Lorgeril , Cristian Chaparro et al.

EPIMAR 2020 Epigenetics in Marine biology, May 2020, Online, France. 35 p

Communication dans un congrès hal-04889202v1

Cracking the code of pacific oyster mortality syndrome

Julien de Lorgeril , Aude Lucasson , Bruno Petton , Eve Toulza , C. Montagnani et al.

REID + Immuninv 2019, Réseau Ecologie des Interactions Durables; Réseau Immunité des Invertébrés, May 2019, Montpellier, France

Communication dans un congrès hal-04890593v1

Characterization of OSHV-1 µVAR genotypic diversity during pacific oyster mortality outbreaks in two French aquaculture areas

Jean Delmotte , Richard Galinier , Julien de Lorgeril , Bruno Petton , Yannick Gueguen et al.

19th International Conference on Diseases of Fish and Shellfish EAFP Meeting, Sep 2019, Porto, Portugal

Communication dans un congrès hal-04891711v1

Rôle de la diversité génétique de l’herpèsvirus OsHV-1 dans les mortalités de l’huître du Pacifique

Jean Delmotte , Richard Galinier , Julien de Lorgeril , Guillaume Mitta , C. Montagnani et al.

21e Journées Francophones de virologie, Société Française de Virologie, Mar 2019, Lyon, France

Communication dans un congrès hal-04891687v1

How to strain your oyster? A story of immune shaping and priming in the pacific oyster, Crassostrea gigas

C. Montagnani , Maxime Lafont , Bruno Petton , Julien de Lorgeril , Manon Fallet et al.

Aqua 2018 14th International Symposium on Aquaculture Nutrition, Aug 2018, Montpellier, France

Communication dans un congrès hal-03965651v1

Cracking the code of Pacific oyster mortality syndrom

Guillaume Mitta , Julien de Lorgeril , Aude Lucasson , Bruno Petton , Eve Toulza et al.

Aqua 2018 14th International Symposium on Aquaculture Nutrition, Aug 2018, Montpellier, France

Communication dans un congrès hal-03965691v1

An integrative approach to decipher the summer mortality syndrome affecting Pacific oysters

Julien de Lorgeril , Aude Lucasson , Bruno Petton , Eve Toulza , Philippe Haffner et al.

Immuninv 2017, Jun 2017, Lyon, France

Communication dans un congrès hal-03966171v1

An integrative approach to decipher the mortality syndrome affecting juvenile Pacific oysters

Julien de Lorgeril , Aude Lucasson , Bruno Petton , Eve R Toulza , Philippe Haffner et al.

International Conference on Holobionts, Apr 2017, Paris, France

Communication dans un congrès hal-03965715v1

Recurrent bleaching inducing thermotolerance increases: a dive into the holobiont adaptability through (meta)genomic and epigenomic mechanisms

Jeremie Vidal-Dupiol , Eve R Toulza , Christoph Grunau , Cristian Chaparro , David R Roquis et al.

13th International Coral Reef Symposium, Jun 2016, Honolulu, United States. pp.357

Communication dans un congrès hal-03965822v1
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Transcriptomic plasticity in schistosome worms after host shift and adaptive introgression can contribute to their zoonotic potential

Nelia Luviano , Eglantine Mathieu-Bégné , Julien Kincaid-Smith , Olivier Rey , Marion A.L. Picard et al.

Parasite evolution and impact in action: assessing the importance of hybrid schistosomes in Africa, Feb 2025, Londres, United Kingdom.

Poster de conférence hal-04939728v1
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Innate immune memory process in Biomphalaria glabrata snails: a comparative multi-omic approach to decipher the function and role-played by the hemocyte immune cells against S. mansoni infections

Remi Pichon , Silvain Pinaud , Maud Laffitte , Cristian Chaparro , Emmanuel Vignal et al.

18th Ecology and Evolution of Infectious Diseases Meeting EEID2021, Jun 2021, Montpellier, France.

Poster de conférence hal-04887929v1
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Is the cercarial emission rhythm of the parasite Schistosoma mansoni circadian ?

Chrystelle Lasica , Gabriel Mouahid , Frédéric D Chevalier , Winka Le Clec’h , Cristian Chaparro et al.

18th Ecology and Evolution of Infectious Diseases Meeting (EEID 2021), Jun 2021, Montpellier, France.

Poster de conférence hal-04888027v1

Is the cercarial emission rhythm of the parasite Schistosoma mansoni circadian ?

Chrystelle Lasica , Gabriel Mouahid , Chevalier F.D. , Winka Le Clec’h , Cristian Chaparro et al.

18th Meeting of Ecology and Evolution of Infectious Diseases (EEID), Jun 2021, Montpellier, France

Poster de conférence hal-03428131v1

Is the cercarial emission rhythm of the parasite Schistosoma mansoni circadian?

Chrystelle Lasica , Gabriel Mouahid , Chevalier F.D. , Winka Le Clec’h , Cristian Chaparro et al.

86th Cold Spring Harbor Laboratory Symposium on Quantitative Biology: Biological Time Keeping, Jun 2021, Online, United States

Poster de conférence hal-03428135v1
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Killing or Cheating: two strategies to colonize an oyster

Daniel Oyanedel , Arnaud Lagorce , Maxime Bruto , Philippe Haffner , Marie-Agnes Travers et al.

18th Ecology and Evolution of Infectious Diseases Meeting EEID2021, Jun 2021, Montpellier, France. , 2021

Poster de conférence hal-04887973v1
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No pre-zygotic isolation mechanisms between Schistosoma haematobium and Schistosoma bovis parasites: from mating interactions to differential gene expression

Julien Kincaid-Smith , Eglantine Mathieu-Bégné , Cristian Chaparro , Marta Reguera-Gómez , Stephen Mulero et al.

13th European Multicolloquium of Parasitology EMOP2021, Oct 2021, Belgrade (on line), Serbia.

Poster de conférence hal-04887795v1

Pseudosuccinea columella – Fasciola hepatica interaction: on the mechanistic and immunobiological bases of the snail host resistance/susceptibility to its parasitic trematode

Annia Alba , J. Sanchez , Antonio Vazquez , David Duval , Cristian Chaparro et al.

REID + Immuninv 2019, May 2019, Montpellier, France.

Poster de conférence hal-04890610v1
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Species-specific mechanisms of cytotoxicity toward immune cells determine the successful outcome of vibrio infections in oysters

Tristan Rubio , Daniel Oyanedel , Yannick Labreuche , Eve Toulza , Xing Luo et al.

Conférences Jaques Monod CJM3-2019 : Immunologie intégrative des insectes : contrôle des infections, Jun 2019, Roscoff, France. , 116, pp.14238 - 14247, 2019

Poster de conférence hal-04891592v1

Transgenerational response to early microbial exposure in the oyster Crassostrea gigas and positive impact on survival capacities to juvenile mortality syndrome

Manon Fallet , Bruno Petton , Julien de Lorgeril , Sébastien Comarmond , Cristian Chaparro et al.

5. Journée d'Animation Scientifique du réseau épiPhase, Jun 2019, Toulouse, France. 35 p., 2019, épiPHASE

Poster de conférence hal-02736036v1
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Clarifying the role of DNA methylation in tree phenotypic plasticity

Mamadou Dia Sow , Anne-Laure Le Gac , Clément Lafon Placette , Alain Delaunay , Isabelle Le Jan et al.

43. FEBS Congress, Biochemistry Forever, Jul 2018, Prague, Czech Republic. FEBS Open Bio, 8 (supplément S1), 2018, Supplément 43rd FEBS Congress, Biochemistry Forever, Prague, Czech Republic, July 7‐12, 2018

Poster de conférence hal-02736952v1

Epigenetic and genetic mechanisms of trained adaptation to global warming in corals

Jeremie Vidal-Dupiol , Eve R Toulza , Christoph Grunau , Olivier Rey , David Roquis et al.

EVOLUTION 2018 - 2nd Joint Congress on Evolutionary Biology, Aug 2018, Montellier, France.

Poster de conférence hal-03969153v1
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Drought-induced acclimation of DNA-hypomethylated poplars

Anne-Laure Le Gac , Régis R. Fichot , Marie Mirouze , Vincent Segura , Alain Delaunay et al.

IUFRO Genomics and Forest Tree Genetics, May 2016, Arcachon, France. , 2016, IUFRO Genomics and Forest Tree Genetics. Abstract book

Poster de conférence hal-02742078v1
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Measuring histone modifications in the human parasite Schistosoma mansoni

Ronaldo de Carvalho Augusto , David Roquis , Marion Picard , Cristian Chaparro , Celine Cosseau et al.

David J. Timson. Schistosoma mansoni. Methods and Protocols, 2151, Springer, pp.93-107, 2020, Methods in Molecular Biology, 978-1-0716-0634-6. ⟨10.1007/978-1-0716-0635-3_9⟩

Chapitre d'ouvrage hal-03328481v1
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The histone code of love: epigenetics of maturation of gonads in the human blood fluke Schistosoma mansoni

Christoph Grunau , Zhigang Lu , Avril Coghlan , Max Moescheid , Thomas Quack et al.

2026

Pré-publication, Document de travail (preprint/prepublication) hal-05505724v1
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Benchmarking of Chromatin Immunoprecipitation (ChIP-Seq) methods in the Pacific oyster Magallana gigas

Amelie Dellong , Manon Fallet , Pierre-Louis Stenger , Cristian Chaparro , Jeremie Vidal-Dupiol et al.

2024

Pré-publication, Document de travail hal-04869413v1
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Epigenetic variation causes heritable variation in complex traits in the mollusk Biomphalaria glabrata, vector of the human parasite Schistosoma mansoni

Nelia Luviano , M. Lopez , Fleur Gawehns , Bart Haegeman , Pierick Mouginot et al.

2023

Pré-publication, Document de travail hal-04879747v1
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Targeted insertion of reporter transgene into a gene safe harbor in human blood fluke, Schistosoma mansoni

Wannaporn Ittiprasert Tanno , Max F Möscheid , Cristian Chaparro , Victoria H Mann , Thomas Quack et al.

2022

Pré-publication, Document de travail hal-03771118v1
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Hypomethylated poplars show higher tolerance to water deficit and highlight a dual role for DNA methylation in shoot meristem: regulation of stress response and genome integrity

M.D. D Sow , A-L Le Gac , Régis Fichot , S. Lanciano , A. Delaunay et al.

2021

Pré-publication, Document de travail hal-03239719v1
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Sequencing, de novo assembly and annotation of the genome of the scleractinian coral, Pocillopora acuta

Jeremie Vidal-Dupiol , Cristian Chaparro , Marine Pratlong , Pierre Pontarotti , Christoph Grunau et al.

2021

Pré-publication, Document de travail hal-03239739v1
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Chromatin structure changes in Daphnia populations upon exposure to environmental cues – or – The discovery of Wolterecks “Matrix”

Ronaldo de Carvalho Augusto , Aki Minoda , Olivier REY , Céline Cosseau , Cristian Chaparro et al.

2020

Pré-publication, Document de travail hal-02991174v1
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Whole genome sequencing and morphological analysis of the human-infecting schistosome emerging in Europe reveals a complex admixture between Schistosoma haematobium and Schistosoma bovis parasites

Julien Kincaid Smith , Alan Tracey , Ronaldo de Carvalho Augusto , Ingo Bulla , Nancy Holroyd et al.

2018

Pré-publication, Document de travail hal-03134801v1