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Daniel Jacob
I am responsible for the design and/or adaptation of (bio)informatics tools facilitating the capture, storage and use of experimental data in the field of metabolomics and associated metadata. I am also responsible, through scientific monitoring of the field, for the development and/or adaptation of data processing methods (data processing & data mining), for the development and/or deployment of solutions allowing the exploration (data explorer), visualization (data visualization) and data accessibility (open data, FAIR).
40%
Open access
162
Documents
Current affiliations
- 1002364
- 1075986
Researcher identifiers
daniel-jacob65
-
0000-0002-6687-7169
- IdRef : 085566683
Presentation
Research domains
Skills
Data mining
Data management
Publications
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Combining phenotypic, metabolome and proteome data to study maize response to a mild nitrogen deficitJournées du Protéome Vert, Jun 2022, Gif-sur-Yette, France
Conference papers
hal-03878405v1
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RMN métabolomique, aliments & nutrition : quelques exemples de la plateforme Métabolome-MetaboHUB -BordeauxAnimation scientifique : La Résonance Magnétique Nucléaire dans tous ses états…., UR370 QuaPA et PF AgroResonance, INRAE, Jun 2021, distanciel, France
Conference papers
hal-03728319v1
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FAIR principles, an new opportunity to improve the data lifecycleado2019 : journée thématique sur les autorités de données, Pascal Dayre - CNRS ENSEEIHT-IRIT, Apr 2019, Toulouse, France
Conference papers
hal-02070883v1
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NMR-based metabolomics at Bordeaux Metabolome Facility: 4 short storiesA Franco-Israeli Symposium in Magnetic Resonance, Jan 2019, Rehovot, Israel
Conference papers
hal-02786826v1
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An overview of NMR applications in metabolite profiling of small molecules for plant metabolism studies2. International Plant Spectroscopy Conference (IPSC), Mar 2019, Berlin, Germany
Conference papers
hal-02786819v1
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An integrated fruit model toolkit: combining fruit biophysical processes with central carbon metabolismSymposium on Advanced Technologies and Management for Innovative Greenhouses: GreenSys2019, Jun 2019, Angers, France. pp.401-410, ⟨10.17660/ActaHortic.2020.1296.52⟩
Conference papers
hal-03125090v1
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NMR-based metabolomics workflow for quality and effect assessment of alternative plant-based diets in rainbow trout.11èmes JS du Réseau Francophone de Métabolomique et Fluxomique, May 2018, Liège, Belgium
Conference papers
hal-03058513v1
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Integrative and predictive biology outside the plant: linking computational tools to fleshy fruit systemsColloque Biologie synthétique et systémique, BioSynSys, Jun 2016, Bordeaux, France
Conference papers
hal-02739719v1
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Leaf marker metabolites for low nitrogen stress in maizePlant Biology Europe EPSO/FESPB 2016, Jun 2016, Prague, Czech Republic
Conference papers
hal-01605806v1
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Development of metabolomics approaches for quality assessment of plant-based diet in rainbow troutAquaculture Europe 2015, European Aquaculture Society (EAS). BEL., Oct 2015, Rotterdam, Netherlands
Conference papers
hal-02740877v1
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Development of Metabolomics Approaches for Quality Assessment of Plant-Based Diet in Rainbow TroutMeeting Abstracts, 2015, Rotterdam, NLD, Unknown Region. pp.252-253
Conference papers
hal-02139685v1
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PeakForest: a spectral reference database made from metabolomic experts for metabolomic analyses9. Journées scientifiques du RFMF, Réseau Francophone de Métabolomique et Fluxomique (RFMF). FRA., Jun 2015, Lille, France
Conference papers
hal-02742965v1
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Using developmental and diurnal compositional changes of tomato to study metabolism8. Journées Scientifiques du Réseau Français de Métabolomique et Fluxomique RFMF, May 2014, Lyon, France. 1 p
Conference papers
hal-02793195v1
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Ontology usage in Omics Standards Initiatives: Pros and Cons of enriching XML data formats with controlled vocabulary termsODLS 2014 – Ontologies and Data in Life Sciences, Aug 2014, Freibourg, Germany
Conference papers
hal-02797986v1
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La métabolomique : un outil de la génomique fonctionnelle au service de la biologie des systèmes8e Congrès Jeunes Chercheurs de la SFBV, Société Française de Biologie Végétale (SFBV). FRA., Jun 2014, Tours, France. 1 p
Conference papers
hal-02801036v1
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Deciphering ascorbic acid regulation in tomato fruit ripening18. EUCARPIA Meeting of the Tomato Working Group, Apr 2014, Avignon, France. 1 p
Conference papers
hal-02800985v1
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ERVA: a novel method of binning, allowing chemical information to be highlighted, from 1H-NMR metabolics data7. Journées scientifiques du Réseau Français de Métabolomique et Fluxomique, Jun 2013, Amiens, France. 1 p
Conference papers
hal-02805015v1
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MetaboHUB: a national infrastructure dedicated to metabolomics and fluxomics7. Journées scientifiques du Réseau Français de Métabolomique et de Fluxomique (RFMF), Jun 2013, Amiens, France
Conference papers
hal-01002241v1
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MetaboHUB: a french infrastructure dedicated to metabolomics and fluxomicsMetabolomics 2013 - 9. Annual conference of the Metabolomics Society, Jul 2013, Glasgow, United Kingdom
Conference papers
hal-01002247v1
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MetaboHUB: une infrastructure nationale au service de la métabolomiqueSéance thématique "La métabolomique : son application en recherche pharmaceutique et diagnostique", Académie Nationale de Pharmacie. FRA., Feb 2013, Paris, France
Conference papers
hal-01002248v1
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Diurnal compositional changes of tomato fruit and leafMetabolomics 2013, Jul 2013, Glasgow, United Kingdom. 1 p
Conference papers
hal-02803658v1
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Standardisation et stockage des données numériques de MetaboHub dans le contexte des initiatives européennes1. Journée scientifique de MétaboHUB, Oct 2012, Villevave d'Ornon, France
Conference papers
hal-02802257v1
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Can we trust untargeted metabolomics: results of the metabo-ring study2. African-European Conference on Chemometrics - Afrodata 2012, Nov 2012, Stellenbosch, South Africa
Conference papers
hal-01595486v1
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Peut-on faire confiance à la métabolomique: résultats de l'initiative MetaboRing6. Journées Scientifiques du Réseau Français de Métabolomique et Fluxomique (RFMF), May 2012, Nantes, France
Conference papers
hal-01594993v1
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WP3 Bioinformatics Framework1. Journée scientifique de MétaboHUB, Oct 2012
Conference papers
hal-02802614v1
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Développement d'outils informatiques pour le traitement et l'analyse des données en RMN-1H, dans un contexte d'expériences métabolomiques5. Journées scientifiques du Réseau Français de Métabolomique et Fluxomique, Labo/service de l'auteur, Ville service., May 2011, Paris, France
Conference papers
hal-02747402v1
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Tools and applications in plant metabolomics at Bordeaux Metabolome Fluxome Facility (PMFB; http://www.bordeaux.inra.fr/umr619/NMR.htm)5. Journées scientifiques du Réseau Français de Métabolomique et Fluxomique, Labo/service de l'auteur, Ville service., May 2011, Paris, France
Conference papers
hal-02749839v1
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PROTIC workshop: A bioinformatics environment for proteom |