Delphine Charif

37
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Publications

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A transcriptomic dataset for investigating the Arabidopsis Unfolded Protein Response under chronic, proteotoxic endoplasmic reticulum stress

Amélie Ducloy , Marianne Azzopardi , Caroline Ivsic , Gwendal Cueff , Delphine Sourdeval et al.
Data in Brief, 2024, 53, pp.110243. ⟨10.1016/j.dib.2024.110243⟩
Article dans une revue (data paper) hal-04566255 v1
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Genome-wide specificity of plant genome editing by both CRISPR–Cas9 and TALEN

Nadia Bessoltane , Florence Charlot , Anouchka Guyon-Debast , Delphine Charif , Kostlend Mara et al.
Scientific Reports, 2022, 12 (1), ⟨10.1038/s41598-022-13034-2⟩
Article dans une revue hal-03726730 v1
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Datasets of seed mucilage traits for Arabidopsis thaliana natural accessions with atypical outer mucilage

Mireille Cambert , Adeline Berger , Christine Sallé , Stéphanie Esling , Delphine Charif et al.
Scientific Data , 2021, 8 (1), ⟨10.1038/s41597-021-00857-3⟩
Article dans une revue (data paper) hal-03185128 v1
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Corrigendum: FANCM Limits Meiotic Crossovers in Brassica Crops

Aurélien Blary , Adrián Gonzalo , Frédérique Eber , Aurélie Bérard , Hélène Bergès et al.
Frontiers in Plant Science, 2020, 11, pp.604728. ⟨10.3389/fpls.2020.604728⟩
Article dans une revue hal-03161790 v1

Rapid meiotic prophase chromosome movements in Arabidopsis thaliana are linked to essential reorganization at the nuclear envelope

Laurence Cromer , Mariana Tiscareno-Andrade , Sandrine Lefranc , Aurélie Chambon , Aurélie Hurel et al.
Nature Communications, 2020, 15 (1), pp.5964. ⟨10.1101/2023.11.13.566812⟩
Article dans une revue hal-04495019 v1
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Extensive nuclear reprogramming and endoreduplication in mature leaf during floral induction

Stefania del Prete , Anne Molitor , Delphine Charif , Nadia Bessoltane-Bentahar , Ludivine Soubigou-Taconnat et al.
BMC Plant Biology, 2019, 19, pp.135. ⟨10.1186/s12870-019-1738-6⟩
Article dans une revue hal-02618994 v1

Homoeologous exchanges cause extensive dosage-dependent gene expression changes in an allopolyploid crop

Andrew Lloyd , Aurélien Blary , Delphine Charif , Catherine Charpentier , Joseph Tran et al.
New Phytologist, 2018, 217 (1), pp.367-377. ⟨10.1111/nph.14836⟩
Article dans une revue hal-02624624 v1
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FANCM Limits Meiotic Crossovers in Brassica Crops

Aurélien Blary , Adrián Gonzalo , Frederique Eber , Aurélie Berard , Helene Berges et al.
Frontiers in Plant Science, 2018, 9, 13 p. ⟨10.3389/fpls.2018.00368⟩
Article dans une revue hal-02623280 v1
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Xyloglucan Metabolism Differentially Impacts the Cell Wall Characteristics of the Endosperm and Embryo during Arabidopsis Seed Germination

J. Sechet , A. Frey , D. Effroy-Cuzzi , A. Berger , F. Perreau et al.
Plant Physiology, 2016, 170 (3), pp.1367--80. ⟨10.1104/pp.15.01312⟩
Article dans une revue hal-01563909 v1
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Meiotic Gene Evolution: Can You Teach a New Dog New Tricks?

Andrew Lloyd , Marion Ranoux , Sonia S. Vautrin , Natasha Marie Glover , Joëlle Fourment et al.
Molecular Biology and Evolution, 2014, 31 (7), pp.1724-1727. ⟨10.1093/molbev/msu119⟩
Article dans une revue hal-02635778 v1
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A cryptic cytoplasmic male sterility unveils a possible gynodioecious past for [i]Arabidopsis thaliana[/i]

Nicolas Gobron , Cesary Waszczak , Matthieu Simon , Sophie Hiard , Stéphane Boivin et al.
PLoS ONE, 2013, 8 (4), ⟨10.1371/journal.pone.0062450⟩
Article dans une revue hal-01190571 v1
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Feminizing Wolbachia: a transcriptomics approach with insights on the immune response genes in Armadillidium vulgare

Frédéric Chevalier , Juline Herbinière-Gaboreau , Delphine Charif , Guillaume Mitta , Frédérick F. Gavory et al.
BMC Microbiology, 2012, 12 (suppl), pp.S1. ⟨10.1186/1471-2180-12-S1-S1⟩
Article dans une revue halsde-00661197 v1
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Influence of Wolbachia on host gene expression in an obligatory symbiosis.

Natacha Kremer , Delphine Charif , Hélène Henri , Frédérick F. Gavory , Patrick Wincker et al.
BMC Microbiology, 2012, 12 (Suppl 1), pp.1-16. ⟨10.1186/1471-2180-12-S1-S7⟩
Article dans une revue hal-00763438 v1
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Host gene response to endosymbiont and pathogen in the cereal weevil \textitSitophilus oryzae

A. Vigneron , Delphine Charif , C. Vincent-Monégat , A. Vallier , Frédérick F. Gavory et al.
BMC Microbiology, 2012, 12, pp.S14. ⟨10.1186/1471-2180-12-S1-S14⟩
Article dans une revue hal-02278586 v1

Comparative high-throughput transcriptome sequencing and development of SiESTa, the \textitSilene EST annotation database

N. Blavet , D. Charif , C. Oger-Desfeux , Gabriel Marais , A. Widmer
BMC Genomics, 2011, 12, pp.1-11. ⟨10.1186/1471-2164-12-376⟩
Article dans une revue hal-02303175 v1

Endosymbiont metacommunities, mtDNA diversity and the evolution of the Bemisia tabaci (Hemiptera: Aleyrodidae) species complex.

Gwénaelle Gueguen , Fabrice Vavre , Olivier Gnankine , Michel Peterschmitt , Delphine Charif et al.
Molecular Ecology, 2010, 19 (19), pp.4365-4378. ⟨10.1111/j.1365-294X.2010.04775.x⟩
Article dans une revue istex hal-00746855 v1

Do variable compensatory mechanisms explain the polymorphism of the dependence phenotype in the Asobara tabida-wolbachia association?

Natacha Kremer , Franck Dedeine , Delphine Charif , Cédric Finet , Roland Allemand et al.
Evolution - International Journal of Organic Evolution, 2010, 64 (10), pp.2969-79. ⟨10.1111/j.1558-5646.2010.01034.x⟩
Article dans une revue istex hal-00850365 v1

Molecular Detection Penetrance and Transmission of an Inherited Virus Responsible for Behavioral Manipulation of an Insect Parasitoid

S. Patot , D. Lepetit , D. Charif , Julien Varaldi , Frédéric Fleury
Applied and Environmental Microbiology, 2009, 75 (3), pp.703-710. ⟨10.1128/AEM.01778-08⟩
Article dans une revue hal-00428320 v1

Wolbachia interferes with ferritin expression and iron metabolism in insects.

Natacha Kremer , Denis Voronin , Delphine Charif , Patrick Mavingui , Bertrand Mollereau et al.
PLoS Pathogens, 2009, 5 (10), pp.e1000630. ⟨10.1371/journal.ppat.1000630⟩
Article dans une revue hal-00850400 v1

A new case of <i>Wolbachia</i> dependence in the genus <i>Asobara</i>: evidence for parthenogenesis induction in <i>Asobara japonica</i>

N. Kremer , D. Charif , H. Henri , M. Bataille , G. Prévost et al.
Heredity, 2009, 103 (3), pp.248-256. ⟨10.1038/hdy.2009.63⟩
Article dans une revue hal-00428410 v1
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Identification of the Weevil immune genes and their expression in the bacteriome tissue

C. Anselme , V. Perez-Brocal , A. Vallier , C. Vincent-Monégat , D. Charif et al.
BMC Biology, 2008, 6, pp.43-55. ⟨10.1186/1741-7007-6-43⟩
Article dans une revue hal-00391128 v1

MareyMap: an R-based tool with graphical interface for estimating recombination rates

C. Rezvoy , D. Charif , Laurent Guéguen , Gabriel Marais
Bioinformatics, 2007, 23, pp.2188-2189
Article dans une revue hal-00434645 v1

SeqinR 1.0-2: a contributed package to the R project for statistical computing devoted to biological sequences retrieval and analysis

D. Charif , J.R. Lobry
incollection, 2007, --, pp.207-232
Article dans une revue hal-00434576 v1

Interaction between host genotype and environmental conditions affects bacterial density in <i>Wolbachia</i> symbiosis

L. Mouton , H. Henri , D. Charif , M. Boulétreau , F. Vavre
Biology Letters, 2007, 3, pp.210-213
Article dans une revue hal-00434634 v1

A Survey of the Bacteriophage WO in the Endosymbiotic Bacteria <i>Wolbachia</i>

L. Gavotte , H. Henri , R. Stouthamer , D. Charif , S. Charlat et al.
Molecular Biology and Evolution, 2007, 24, pp.427-435
Article dans une revue hal-00434685 v1

Online synonymous codon usage analyses with the ade4 and seqinR packages

D. Charif , J. Thioulouse , J.R. Lobry , G. Perrière
Bioinformatics, 2005, 21, pp.545-547
Article dans une revue hal-00427727 v1

Identifying and isolating meiotic mutants in a polyploid brassica crop

Marina Pfalz , Adrián Gonzalo , Nicolas Christophorou , Aurélien Blary , Aurélie Berard et al.
Mónica Pradillo; Stefan Heckmann. Plant Meiosis : methods and protocols, 2061, Humana, 405 p., 2020, Methods in Molecular Biology, 978-1-4939-9817-3 ; 978-1-4939-9818-0. ⟨10.1007/978-1-4939-9818-0_21⟩
Chapitre d'ouvrage hal-02912375 v1

The contribution of mucilage to seed longevity and how the maternal environment influences it production

Isabelle Fabrissin , N Sano , Tudel Cadoret , Delphine Charif , Boris Collet et al.
International Society of Seed Science 6th workshop on the molecular aspects of seed dormancy and germination, International Society for Seed Science, Sep 2019, Volendam, Netherlands
Communication dans un congrès hal-03290786 v1

Translational research into meiotic recombination: more than mere validations

Adrian Gonzalo , Aurelien Blary , Nicolas Christophorou , Marina Pfalz , Nadia Bessoltane-Bentahar et al.
21th Crucifer Genetics Conference, Jul 2018, Saint Malo (FR), France
Communication dans un congrès hal-04507637 v1

Predicting the influence of climate induced temperature changes on the production of polysaccharides in Arabidopsis seed mucilage

H.M. North , M.C. Ralet , A. Berger , Tudel Cadoret , Christine Salle et al.
VIII Cell Wall Research Conference, Jun 2018, Asilomar, United States
Communication dans un congrès hal-02609211 v1

The contribution of mucilage to seed life expectancy and how the maternal environment influences its production

Isabelle Fabrissin , Tudel Cadoret , Delphine Charif , Boris Collet , N Sano et al.
France-Japan GDRI-Integrative Plant Biology, Oct 2017, Lyon, France
Communication dans un congrès hal-03284112 v1

Are there common host functions involved in insect symbioses ? A comparative transcriptomic approach

Fabrice Vavre , Delphine Charif , Patrick Mavingui , Didier Bouchon , Abdelaziz Heddi
COST Action FA0701 "Arthropod Symbioses: from fundamental studies to pest and disease management", European Cooperation in Science and Technology (COST). Bruxelles, BEL., Jan 2010, Funchal, Portugal. n. p
Communication dans un congrès hal-02818416 v1

Molecular and immune particularities of the weevil's bacteriome

Aurélien Vigneron , D. Charif , Severine Balmand , Abdelaziz Heddi
Immuninv 2009, 2009, France
Communication dans un congrès hal-00497061 v1