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Delphine LALLIAS

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Are resistances to acute hyperthermia or hypoxia stress similar and consistent between early and late ages in rainbow trout using isogenic lines?

H. Lagarde , Florence Phocas , Simon Pouil , Lionel Goardon , M. Bideau
Aquaculture, 2023, 562, pp.738800. ⟨10.1016/j.aquaculture.2022.738800⟩
Journal articles hal-03778854v1

Genome-wide association study and genomic prediction of tolerance to acute hypoxia in rainbow trout

M Prchal , Jonathan D’ambrosio , Henri Lagarde , Delphine Lallias , P Patrice
Aquaculture, 2022, 565, pp.739068. ⟨10.1016/j.aquaculture.2022.739068⟩
Journal articles hal-03944462v1
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Combining Multiple Approaches and Models to Dissect the Genetic Architecture of Resistance to Infections in Fish

Clémence Fraslin , Edwige Quillet , Tatiana Rochat , Nicolas Dechamp , Jean François Bernardet
Frontiers in Genetics, 2020, 11, ⟨10.3389/fgene.2020.00677⟩
Journal articles hal-02927380v1
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Sources of variation of DNA methylation in rainbow trout: combined effects of temperature and genetic background

Delphine Lallias , Maria Bernard , Céline Ciobotaru , Nicolas Dechamp , Laurent Labbé
Journal articles hal-03003559v1
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Divergent national-scale trends of microbial and animal biodiversity revealed across diverse temperate soil ecosystems

Paul B. L. George , Delphine Lallias , Simon Creer , Fiona M. Seaton , John G. Kenny
Nature Communications, 2019, 10, ⟨10.1038/s41467-019-09031-1⟩
Journal articles hal-02622552v1
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Standardized IMGT® Nomenclature of Salmonidae IGH Genes, the Paradigm of Atlantic Salmon and Rainbow Trout: From Genomics to Repertoires

Susana Magadan , Aleksei Krasnov , Saida Hadi-Saljoqi , Sergey Afanasyev , Stanislas S. Mondot
Frontiers in Immunology, 2019, 10, ⟨10.3389/fimmu.2019.02541⟩
Journal articles hal-02867815v1
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Sample size effects on the assessment of eukaryotic diversity and community structure in aquatic sediments using high-throughput sequencing

Francisco J. A. Nascimento , Delphine Lallias , Holly M. Bik , Simon Creer
Scientific Reports, 2018, 8, pp.1-12. ⟨10.1038/s41598-018-30179-1⟩
Journal articles hal-02623380v1
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Annual time-series analysis of aqueous eDNA reveals ecologically relevant dynamics of lake ecosystem biodiversity

Iliana Bista , Gary R. Carvalho , Kerry Walsh , Mathew Seymour , Mehrdad Hajibabaei
Nature Communications, 2017, 8, pp.1-11. ⟨10.1038/ncomms14087⟩
Journal articles hal-01607796v1
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Genetic variability of environmental sensitivity revealed by phenotypic variation in body weight and (its) correlations to physiological and behavioral traits

Delphine Lallias , Edwige Quillet , Marie-Laure Bégout , Benoît Aupérin , Hooi Ling Khaw
PLoS ONE, 2017, 12 (12), pp.1-19. ⟨10.1371/journal.pone.0189943⟩
Journal articles hal-01674985v1
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New insights about the introduction of the Portuguese oyster, Crassostrea angulata, into the North East Atlantic from Asia based on a highly polymorphic mitochondrial region

Deborah M. Power , Jonathan W. King , Frederico M. Batista , Ana Grade , Hicham Chairi
Aquatic Living Resources, 2016, 29 (4), pp.404. ⟨10.1051/alr/2016035⟩
Journal articles hal-01483208v1

Invasion genetics of the Pacific oyster Crassostrea gigas in the British Isles inferred from microsatellite and mitochondrial markers

Delphine Lallias , Pierre Boudry , Frederico M. Batista , Andy Beaumont , Jonathan W. King
Biological Invasions, 2015, 17 (9), pp.2581 - 2595. ⟨10.1007/s10530-015-0896-1⟩
Journal articles hal-01535289v1

Convergence of multiple markers and analysis methods defines the genetic distinctiveness of cryptic pitvipers

- Mrinalini , Roger S. Thorpe , Simon Creer , Delphine Lallias , Louise Dawnay
Molecular Phylogenetics and Evolution, 2015, 92, pp.266-279. ⟨10.1016/j.ympev.2015.06.001⟩
Journal articles hal-02636436v1
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Environmental metabarcoding reveals heterogeneous drivers of microbial eukaryote diversity in contrasting estuarine ecosystems

Delphine Lallias , Jan G. Hiddink , Vera G. Fonseca , John M. Gaspar , Way Sung
ISME Journal, 2015, 9 (5), pp.1208-1221. ⟨10.1038/ismej.2014.213⟩
Journal articles hal-02632597v1
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Identification of marine fish egg predators using molecular probes

Clive J. Fox , Martin I. Taylor , Jeroen van Der Kooij , Natasha Taylor , Stephen P. Milligan
Marine Ecology Progress Series, 2012, 462, pp.205-218. ⟨10.3354/meps09748⟩
Journal articles hal-02647296v1
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Sample richness and genetic diversity as drivers of chimera formation in nSSU metagenetic analyses

V. G. Fonseca , B. Nichols , Delphine Lallias , C. Quince , G. R. Carvalho
Nucleic Acids Research, 2012, 40 (9), pp.1-9. ⟨10.1093/nar/gks002⟩
Journal articles hal-02647717v1

Relative quantification of the M and F mitochondrial DNA types in the blue mussel Mytilus edulis by real-time PCR

Federico M. Batista , Delphine Lallias , Nicolas Taris , Henrique Guedes-Pinto , Andy R. Beaumont
Journal of Molluscan Studies, 2011, 77 (1), pp.24-29. ⟨10.1093/mollus/eyq031⟩
Journal articles hal-01218839v1

Variance in the reproductive success of flat oyster Ostrea edulis L. assessed by parentage analyses in natural and experimental conditions

Delphine Lallias , Nicolas Taris , P. Boudry , F. Bonhomme , Sylvie Lapegue
Genetics Research, 2010, 92 (3), pp.175-187. ⟨10.1017/S0016672310000248⟩
Journal articles hal-02667005v1

Strategies for the retention of high genetic variability in European flat oyster (Ostrea edulis) restoration programmes

Delphine Lallias , Pierre Boudry , Sylvie Lapègue , Jon W. King , Andy R. Beaumont
Conservation Genetics, 2010, 11 (5), pp.1899-1910. ⟨10.1007/s10592-010-0081-0⟩
Journal articles hal-02668522v1

Combining two-stage testing and interval mapping strategies to detect QTL for resistance to Bonamiosis in the European flat oyster Ostrea edulis

Delphine Lallias , L. Gomez-Raya , C.S. Haley , I. Arzul , S. Heurtebise
Marine Biotechnology, 2009, 11 (5), pp.570-584. ⟨10.1007/s10126-008-9173-y⟩
Journal articles hal-02657151v1
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Characterization of 27 microsatellite loci in the European flat oyster Ostrea edulis

Delphine Lallias , Ruth Stockdale , Pierre Boudry , Andy R. Beaumont , Sylvie Lapegue
Molecular Ecology Resources, 2009, 9 (3), pp.960-963. ⟨10.1111/j.1755-0998.2009.02515.x⟩
Journal articles hal-02664373v1

Characterization of ten microsatellite loci in the blue mussel Mytilus edulis

Delphine Lallias , Ruth Stockdale , Pierre Boudry , Sylvie Lapegue , Andy R. Beaumont
Journal of Shellfish Research, 2009, 28 (3), pp.547-551. ⟨10.2983/035.028.0317⟩
Journal articles hal-02662402v1
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Bonamia ostreae-induced mortalities in one-year old European flat oysters Ostrea edulis: experimental infection by cohabitation challenge

Delphine Lallias , Isabelle Arzul , Serge Heurtebise , Sylvie Ferrand , Bruno Chollet
Aquatic Living Resources, 2008, 21 (4), pp.423-439. ⟨10.1051/alr:2008053⟩
Journal articles hal-02658197v1
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AFLP-based genetic linkage maps of the blue mussel (Mytilus edulis)

Delphine Lallias , S. Lapegue , C. Hecquet , P. Boudry , A.R. Beaumont
Animal Genetics, 2007, 38 (4), pp.340-349. ⟨10.1111/j.1365-2052.2007.01611.x⟩
Journal articles hal-02660403v1
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GENETIC PARAMETERS AND GENOME-WIDE ASSOCIATION STUDY OF RESISTANCE TO ACUTE HYPERTHERMIA IN RAINBOW TROUT

Henri Lagarde , Delphine Lallias , Pierre Patrice , Martin Prchal , Yoannah François
World Congress on Genetics Applied to Livestock Production, Jul 2022, Rotterdam, Netherlands
Conference papers hal-03779084v1
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A NEW 665K SNP ARRAY USED FOR DETECTING SIGNATURES OF POSITIVE SELECTION IN RAINBOW TROUT (ONCORHYNCHUS MYKISS)

Florence Phocas , Katy Paul , Audrey Dehaullon , Maria Bernard , Gwendal Restoux
International Symposium on Genetics in Aquaculture, Nov 2022, Puerto Varas, Chile
Conference papers hal-03778981v1
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UNDERSTANDING MOLECULAR MECHANISMS OF DISEASE RESISTANCE IN CONSTRASTED RAINBOW TROUT ISOGENIC LINES

Valentin Thomas , Thomas C. Clark , Audrey Laurent , Diego Perojil Morata , Mathieu Charles
International Symposium on Genetics in Aquaculture, Nov 2022, Puerto Varas, Chile
Conference papers hal-03778975v1
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IMPACT OF TEMPERATURE REGIME DURING EMBRYONIC DEVELOPMENT ON GENOMEWIDE PATTERNS OF DNA METHYLATION IN LIVER SAMPLES OF JUVENILE RAINBOW TROUT

Delphine Lallias , Anne Aubert-Frambourg , Aurélie Chaulot-Talmon , Luc Jouneau , Laurent Labbé
Aquaculture Europe 2021, Oct 2021, Funchal (Madeira), Portugal
Conference papers hal-03778951v1
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Relationship between early or late resistance to acute temperature or hypoxia stresses in six rainbow trout isogenic lines

Henri Lagarde , Martin Prchal , Simon Pouil , Lionel Goardon , Marjorie Bideau
Aquaculture Europe 2021, Oct 2021, Funchal (Madeira), Portugal
Conference papers hal-03778876v1
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GENOME-WIDE ASSOCIATION STUDY OF HYPOXIA STRESS TOLERANCE IN RAINBOW TROUT

Martin Prchal , Delphine Lallias , Henri Lagarde , Jonathan D’ambrosio , Pierre Patrice
Aquaculture Europe 2021, Oct 2021, Funchal (Madeira), Portugal
Conference papers hal-03778912v1

Sources de variation de la méthylation de l'ADN chez la truite arc-en-ciel : effets combinés de la température et du patrimoine génétique

Delphine Lallias , Aurélie Chaulot-Talmon , Anne Aubert-Frambourg , Luc Jouneau , Laurent Labbé
6ème journée d'animation scientifique autour de l'épigénétique (épiPHASE), Jun 2021, Zoom, France. pp.1031-1052, ⟨10.1080/15592294.2020.1834924⟩
Conference papers hal-03779185v1
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Analysis of genomewide patterns of DNA methylation in response to an early temperature stress in rainbow trout

Delphine Lallias , Edwige Quillet , Maria Bernard , Céline Ciobotaru , Nicolas Dechamp
Aquaculture Europe 2019, Oct 2019, Berlin, Germany
Conference papers hal-02950585v1
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Etude de la variabilité génétique de la méthylation de l'ADN en réponse à un stress de température précoce chez la truite arc-en-ciel

Delphine Lallias , Edwige Quillet , Nicolas Dechamp , Maria Bernard , Jean-Michel Le Calvez
4. Journée de Séminaires du Département Phase sur l'Epigénétique EpiPhase, May 2018, Nouzilly, France
Conference papers hal-02790958v1
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Analysis of genetic variability of global DNA methylation in response to an early temperature stress in rainbow trout

Delphine Lallias , Edwige Quillet , Nicolas Dechamp , Jean-Michel Le Calvez , Marjorie Bideau
World Aquaculture 2018, European Aquaculture Society (EAS). BEL., Aug 2018, Montpellier, France. 848 p
Conference papers hal-02734994v1
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Analysis of genetic variability of DNA methylation in response to an early temperature stress in rainbow trout

Delphine Lallias , Edwige Quillet , Maria Bernard , Nicolas Dechamp , Jean-Michel Le Calvez
13. International Symposium of Genetics in Aquaculture (ISGA XIII), Jul 2018, Cairns, Australia
Conference papers hal-02737362v1
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IMPROVING RESISTANCE TO ACUTE HYPERTHERMIA BY GENOMIC SELECTION TO ADAPT RAINBOW TROUT LINES TO CLIMATE CHANGE

Henri Lagarde , Delphine Lallias , Pierre Patrice , Martin Prchal , Yoannah François
International Symposium on Genetics in Aquaculture, Nov 2022, Puerto Varas, Chile.
Conference poster hal-03778988v1
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Testing fat content or feeding behaviour as indirect selection criteria for feed efficiency using trout isogenic lines

Simon Pouil , Thierry Kerneis , Edwige Quillet , Delphine Lallias , Laurent Labbé
World Congress on Genetics Applied to Livestock Production, Jul 2022, Rotterdam, Netherlands.
Conference poster hal-03778994v1
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Impact de la durée de stockage au froid des oeufs embryonnés de truite arc-en-ciel

Elodie Harte , Michael Marchand , Tina Terrenne , Lionel Goardon , Laurent Labbé
7. journée d'animation scientifique autour de l'épigénétique (épiPHASE), Jun 2022, Rennes, France. 2022
Conference poster hal-03779238v1
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Indirect criteria to improve feed efficiency in rainbow trout: Links with biochemistry and immune activity

Simon Pouil , Fany Blanc , Thierry Kerneis , Floriane Colon , Mathilde Dupont-Nivet
International Symposium on Genetics in Aquaculture, Nov 2022, Puerto Varas, Chile.
Conference poster hal-03779103v1
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Etude de la variabilité génétique de la méthylation de l'ADN en réponse à un stress de température précoce chez la truite arc-en-ciel

Delphine Lallias , A. Fricot , Jingwei Liu , Lucie Marandel , Nicolas Dechamp
5. Journée d'Animation Scientifique du réseau épiPhase, Jun 2019, Toulouse, France. 2019
Conference poster hal-02734890v1
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In-depth genomic characterization of a unique collection of rainbow trout isogenic lines

Delphine Lallias , Mekki Boussaha , Maria Bernard , Antoine Peigné , Céline Ciobotaru
Aquaculture Europe 2019, Oct 2019, Berlin, Germany
Conference poster hal-02950600v1
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In-depth genomic characterization of a unique collection of rainbow trout isogenic lines

Delphine Lallias , Mekki Boussaha , Maria Bernard , Céline Ciobotaru , Nicolas Dechamp
AQUA 2018, Aug 2018, Montpellier, France. , 2018, AQUA 2008 Abstracts Website
Conference poster hal-02735893v1

AMETHYST : Analyse de la METHYlation après un stress de température chez la truite

Delphine Lallias , Edwige Quillet , Mathilde Dupont-Nivet , Isabelle Leguen , Patrick Prunet
3. Journée de Séminaires du Département Phase sur l'Epigénétique EpiPhase, May 2017, Jouy-en-Josas, France. 2017
Conference poster hal-01605305v1

AMETHYST : Analyse de la METHYlation après un stress de température chez la truite

Delphine Lallias , Edwige Quillet , Isabelle Leguen , Patrick Prunet , Lionel Goardon
2. Réunion d'Animation épiPHASE, Mar 2016, Saint-Pée-sur-Nivelle, France. , 2016
Conference poster hal-02799659v1