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Pathways for converting zooplankton traits to ecological insights are paved with findable, accessible, interoperable, and reusable (FAIR) data practices
Jessica Titocci
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Article dans une revue
hal-05037181
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Sea surface temperature reconstruction in the Pacific Ocean using multi-elemental proxy in Porites and Diploastrea corals: Application to Palau Archipelago
Marine Canesi
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Article dans une revue
hal-04337163
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First release of the Pelagic Size Structure database: global datasets of marine size spectra obtained from plankton imaging devices
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Article dans une revue
hal-04648046
v1
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Combining in situ and ex situ plankton image data to reconstruct zooplankton (>1 mm) volume and mass distribution in the global ocean
Yawouvi Dodji Soviadan
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Article dans une revue
hal-04777755
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Multi-omics determination of metabolome diversity in natural coral populations in the Pacific Ocean
Maggie M Reddy
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Corentine Goossens
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Slimane Chaib
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Article dans une revue
hal-04184949
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Pervasive tandem duplications and convergent evolution shape coral genomes
Benjamin Noel
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hal-04117388
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Host transcriptomic plasticity and photosymbiotic fidelity underpin $Pocillopora$ acclimatization across thermal regimes in the Pacific Ocean
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Article dans une revue
cea-04171796
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Editorial: Technological advances for measuring planktonic components of the pelagic ecosystem: An integrated approach to data collection and analysis
Sophie G. Pitois
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Article dans une revue
hal-04020892
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Telomere DNA length regulation is influenced by seasonal temperature differences in short-lived but not in long-lived reef-building corals
Alice Rouan
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Barbara Porro
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Article dans une revue
cea-04171809
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Monitoring and modelling marine zooplankton in a changing climate
Lavenia Ratnarajah
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Angus Atkinson
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Article dans une revue
hal-04020893
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Gelatinous larvacean zooplankton can enhance trophic transfer and carbon sequestration
Cornelia Jaspers
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Thomas Kiørboe
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Fabien Lombard
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Ángel López-Urrutia
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Article dans une revue
hal-04660289
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Diversity of the Pacific Ocean coral reef microbiome
Pierre Galand
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Guillem Salazar
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Article dans une revue
hal-04176291
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Endogenous viral elements reveal associations between a non-retroviral RNA virus and symbiotic dinoflagellate genomes
Alex Veglia
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hal-04176296
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Integrative omics framework for characterization of coral reef ecosystems from the Tara Pacific expedition
Caroline Belser
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Article dans une revue
hal-04176297
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Differential clearance rates of microbial phylotypes by four appendicularian species
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hal-04021214
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Mistaking plastic for zooplankton: Risk assessment of plastic ingestion in the Mediterranean sea
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Article dans une revue
hal-03959364
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Open science resources from the Tara Pacific expedition across coral reef and surface ocean ecosystems
Fabien Lombard
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Guillaume Bourdin
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Stéphane Pesant
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Sylvain Agostini
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Article dans une revue
hal-04164118
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Ocean-wide comparisons of mesopelagic planktonic community structures
Janaina Rigonato
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hal-04184772
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Differences in carbonate chemistry up-regulation of long-lived reef-building corals
Marine Canesi
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cea-04170119
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Different environmental response strategies in sympatric corals from Pacific Islands
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Article dans une revue
hal-04205154
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Ecology of Endozoicomonadaceae in three coral genera across the Pacific Ocean
Corentin Hochart
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Guillem Salazar
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Article dans une revue
hal-04176293
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Functional responses of aggregate‐colonizing copepods
Marja Koski
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Article dans une revue
hal-03957133
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Basin-Scale Underway Quantitative Survey of Surface Microplankton Using Affordable Collection and Imaging Tools Deployed From Tara
Zoé Mériguet
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hal-03877194
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Patterns of eukaryotic diversity from the surface to the deep-ocean sediment
Tristan Cordier
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Franck Lejzerowicz
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Article dans une revue
hal-03561462
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Planktoscope protocol for plankton imaging
Fabien Lombard
Article dans une revue
hal-04020900
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Establishing Plankton Imagery Dataflows Towards International Biodiversity Data Aggregators
Patricia Martin-Cabrera
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Ruben Perez Perez
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Fabien Lombard
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Klas Ove Möller
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Article dans une revue
hal-03958791
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Plankton Planet: A frugal, cooperative measure of aquatic life at the planetary scale
Colomban de Vargas
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hal-03788523
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Siliceous Rhizaria abundances and diversity in the Mediterranean Sea assessed by combined imaging and metabarcoding approaches
Natalia Llopis Monferrer
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Miguel Sandin
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Fabien Lombard
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Marc Picheral
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Article dans une revue
hal-03847226
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Global Distribution of Zooplankton Biomass Estimated by In Situ Imaging and Machine Learning
Laetitia Drago
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Thelma Panaïotis
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Jean-Olivier Irisson
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Marcel Babin
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Article dans une revue
hal-03810062
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An integrative assessment of the plastic debris load in the Mediterranean Sea
M.L. Pedrotti
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Fabien Lombard
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Alberto Baudena
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François Galgani
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Amanda Elineau
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Article dans une revue
hal-03712132
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Patterns of mesozooplankton community composition and vertical fluxes in the global ocean
Yawouvi Dodji Soviadan
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Fabio Benedetti
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Manoela Brandão
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Sakina-Dorothée Ayata
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Jean-Olivier Irisson
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Article dans une revue
hal-03449715
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PlanktoScope: Affordable Modular Quantitative Imaging Platform for Citizen Oceanography
Thibaut Pollina
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Adam Larson
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Fabien Lombard
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Hongquan Li
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David Le Guen
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Article dans une revue
hal-03971225
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A robust approach to estimate relative phytoplankton cell abundances from metagenomes
Juan José Pierella Karlusich
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Eric Pelletier
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Lucie Zinger
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Fabien Lombard
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Adriana Zingone
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Article dans une revue
hal-03559541
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Coupling Imaging and Omics in Plankton Surveys: State-of-the-Art, Challenges, and Future Directions
Juan José Pierella Karlusich
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Fabien Lombard
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Jean-Olivier Irisson
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Chris Bowler
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Rachel Foster
Article dans une revue
hal-03956267
v1
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Priorities for ocean microbiome research
Andre Abreu
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Adam Gristwood
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Romain Troublé
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Silvia Acinas
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Article dans une revue
hal-03781942
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A global marine particle size distribution dataset obtained with the Underwater Vision Profiler 5
Rainer Kiko
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Marc Picheral
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David Antoine
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Marcel Babin
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Léo Berline
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Article dans une revue
hal-03794258
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Genomic differentiation of three pico‐phytoplankton species in the Mediterranean Sea
Ophélie da Silva
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Sakina-Dorothée Ayata
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Enrico Ser-Giacomi
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Jade Leconte
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Eric Pelletier
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Article dans une revue
hal-03784277
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The Underwater Vision Profiler 6: an imaging sensor of particle size spectra and plankton, for autonomous and cabled platforms
Marc Picheral
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Camille Catalano
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Denis Brousseau
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Hervé Claustre
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Laurent Coppola
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Article dans une revue
hal-03508179
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Machine learning techniques to characterize functional traits of plankton from image data
Eric C. Orenstein
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Sakina-Dorothée Ayata
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Frédéric Maps
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Érica C. Becker
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Fabio Benedetti
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Article dans une revue
hal-03482282
v2
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Global distribution patterns of marine nitrogen-fixers by imaging and molecular methods
Juan José Pierella Karlusich
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Eric Pelletier
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Fabien Lombard
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Madeline Carsique
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Etienne Dvorak
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Article dans une revue
hal-03334117
v2
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Invasion genomics uncover contrasting scenarios of genetic diversity in a widespread marine invader
Cornelia Jaspers
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Moritz Ehrlich
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José Martin Pujolar
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Sven Künzel
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Till Bayer
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Proceedings of the National Academy of Sciences of the United States of America, 2021, 118 (51), pp.e2116211118. ⟨10.1073/pnas.2116211118⟩
Article dans une revue
hal-03531081
v1
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Macroscale patterns of oceanic zooplankton composition and size structure
Manoela Brandão
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Fabio Benedetti
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Séverine Martini
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Yawouvi Dodji Soviadan
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Jean-Olivier Irisson
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Article dans une revue
hal-03318806
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Enhanced monitoring of life in the sea is a critical component of conservation management and sustainable economic growth
Maurice Estes
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Ward Appeltans
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Nic Bax
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Article dans une revue
hal-03406870
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Functional trait-based approaches as a common framework for aquatic ecologists
Severine Martini
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Floriane Larras
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Aurélien Boyé
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Emile Faure
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Nicole Aberle
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Article dans une revue
hal-02996072
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Diel cycle of sea spray aerosol concentration
J. Michel Flores
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Guillaume Bourdin
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Alexander Kostinski
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Orit Altaratz
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Guy Dagan
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Article dans une revue
hal-03350257
v1
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Probabilistic modeling to estimate jellyfish ecophysiological properties and size distributions
Simon Ramondenc
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Damien Eveillard
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Lionel Guidi
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Fabien Lombard
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Benoit Delahaye
Article dans une revue
hal-02539195
v1
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Tara Pacific Expedition’s Atmospheric Measurements of Marine Aerosols across the Atlantic and Pacific Oceans: Overview and Preliminary Results
J. Flores
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O. Altaratz
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M. Trainic
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N. Lang-Yona
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Article dans une revue
hal-02967981
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Tara Oceans: towards global ocean ecosystems biology
Shinichi Sunagawa
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Silvia Acinas
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Peer Bork
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Chris Bowler
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Silvia Acinas
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Article dans une revue
hal-04394809
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Airborne microplastic particles detected in the remote marine atmosphere
Miri Trainic
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J Michel Flores
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Iddo Pinkas
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Maria Luiza Pedrotti
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Article dans une revue
hal-03434730
v1
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Expanding Tara Oceans Protocols for Underway, Ecosystemic Sampling of the Ocean-Atmosphere Interface During Tara Pacific Expedition (2016–2018)
Gabriel Gorsky
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Guillaume Bourdin
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Fabien Lombard
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Maria Luiza Pedrotti
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Samuel Audrain
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Article dans une revue
hal-02407578
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The Tara Pacific expedition-A pan-ecosystemic approach of the "-omics" complexity of coral reef holobionts across the Pacific Ocean
Serge Planes
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Denis Allemand
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Sylvain Agostini
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Bernard Banaigs
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Emilie Boissin
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Article dans une revue
hal-02402685
v1
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Prey taxonomy rather than size determines salp diets
Ayelet Dadon-Pilosof
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Fabien Lombard
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Amatzia Genin
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Kelly R Sutherland
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Gitai Yahel
Article dans une revue
hal-02302266
v1
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From egg to maturity: a closed system for complete life cycle studies of the holopelagic jellyfish Pelagia noctiluca
Simon Ramondenc
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Sophie Collet
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Fabio Benedetti
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Lionel Guidi
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Article dans une revue
hal-02386811
v1
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The Seasonal and Inter-Annual Fluctuations of Plankton Abundance and Community Structure in a North Atlantic Marine Protected Area
Fabio Benedetti
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Laëtitia Jalabert
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Marc Sourisseau
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Beatriz Becker
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Caroline Cailliau
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Article dans une revue
hal-02125435
v1
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Microplastic Ingestion by Gelatinous Zooplankton May Lower Efficiency of the Biological Pump
Alina Wieczorek
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Peter Croot
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Fabien Lombard
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Jerome Sheahan
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Thomas Doyle
Article dans une revue
hal-03955946
v1
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Globally Consistent Quantitative Observations of Planktonic Ecosystems
Fabien Lombard
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Emmanuel Boss
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Anya M Waite
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Meike Vogt
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Julia Uitz
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Article dans une revue
hal-02325576
v1
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Are tropical coastal reefs sinks or sources of mesozooplankton? A case study in a Brazilian marine protected area
Gleice S. Santos
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Lars Stemmann
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Fabien Lombard
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Ralf Schwamborn
Article dans une revue
insu-03661728
v1
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Global Trends in Marine Plankton Diversity across Kingdoms of Life
Federico Ibarbalz
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Nicolas Henry
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Manoela Brandão
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Severine Martini
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Greta Busseni
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Article dans une revue
hal-03094778
v1
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Community‐Level Responses to Iron Availability in Open Ocean Plankton Ecosystems
Luigi Caputi
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Quentin Carradec
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Damien Eveillard
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Amos Kirilovsky
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Eric Pelletier
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Article dans une revue
hal-02999805
v1
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Eukaryotic and cyanobacterial communities associated with marine snow particles in the oligotrophic Sargasso Sea
Regitze B C Lundgreen
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Cornelia Jaspers
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Sachia J Traving
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Daniel J Ayala
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Fabien Lombard
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Article dans une revue
hal-02183469
v1
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Patterns of invasive ctenophore Mnemiopsis leidyi distribution and variability in different recipient environments of the Eurasian seas: A review
T. A. Shiganova
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J. C. Molinero
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A. Malej
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Article dans une revue
hal-02439853
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Into the bloom: Molecular response of pelagic tunicates to fluctuating food availability
Paolo Sordino
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Salvatore d'Aniello
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Eric Pelletier
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Patrick Wincker
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Valeria Nittoli
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Article dans une revue
hal-03955981
v1
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Jellyfish blooms: advances and challenges
Veronica L. Fuentes
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Jennifer E. Purcell
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Robert H. Condon
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Fabien Lombard
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Cathy H. Lucas
Article dans une revue
hal-03505067
v1
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Symbiont Chloroplasts Remain Active During Bleaching-Like Response Induced by Thermal Stress in Collozoum pelagicum (Collodaria, Retaria)
Emilie Villar
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Vincent Dani
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Estelle Bigeard
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Tatiana Linhart
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Miguel Mendez-Sandin
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Article dans une revue
hal-02046464
v1
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Diazotrophic Trichodesmium impact on UV–Vis radiance and pigment composition in the western tropical South Pacific
Cecile Dupouy
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Robert Frouin
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Marc Tedetti
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Morgane Maillard
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Martine Rodier
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Article dans une revue
hal-01864724
v1
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Pediatric angiostrongyliasis.
F. Lombard
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D Basset
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G. Cambonie
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P. Bastien
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E. Jeziorski
Article dans une revue
hal-01957540
v1
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Vertical structure of plankton communities in areas of European eel larvae distribution in the Sargasso Sea
Peter Munk
,
Torkel Gissel Nielsen
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Cornelia Jaspers
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Daniel J. Ayala
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Kam W. Tang
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Article dans une revue
hal-03505057
v1
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Mammoth grazers on the ocean's minuteness: a review of selective feeding using mucous meshes
Keats R Conley
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Fabien Lombard
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Kelly R Sutherland
Article dans une revue
hal-01812596
v1
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Ocean current connectivity propelling the secondary spread of a marine invasive comb jelly across western Eurasia
Cornelia Jaspers
,
Ulrich Niermann
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Victor T. Langenberg
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Elvire Antajan
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Bastian Huwer
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Article dans une revue
hal-02002281
v1
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Author Correction: Surface properties of SAR11 bacteria facilitate grazing avoidance
Ayelet Dadon-Pilosof
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Keats R. Conley
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Yuval Jacobi
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Markus Haber
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Fabien Lombard
et al.
Article dans une revue
hal-04020172
v1
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An initial carbon export assessment in the Mediterranean Sea based on drifting sediment traps and the Underwater Vision Profiler data sets,
Simon Ramondenc
,
M. Goutx
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Fabien Lombard
,
Chiara Santinelli
,
Pernille Stemann Larsen
et al.
Article dans une revue
hal-01437158
v1
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Projected impacts of climate change and ocean acidification on the global biogeography of planktonic Foraminifera
Tilla Roy
,
F. Lombard
,
Laurent Bopp
,
Marion Gehlen
Article dans une revue
hal-01207717
v1
|
|
Respiration of fragile planktonic zooplankton: Extending the possibilities with a single method
M. K. S. Lilley
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F. Lombard
Article dans une revue
hal-01445152
v1
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Comparative muscle development of scyphozoan jellyfish with simple and complex life cycles
Rebecca R Helm
,
Stefano Tiozzo
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Martin K S Lilley
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Fabien Lombard
,
Casey W Dunn
Article dans une revue
hal-01153728
v1
|
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A first step towards improving copepod cultivation using modelling: the effects of density, crowding, cannibalism, tank design and strain selection on copepod egg production yields
Guillaume Drillet
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Fabien Lombard
Article dans une revue
istex
hal-03502732
v1
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|
Accumulation of nanoparticles in " jellyfish " mucus: a bio-inspired route to decontamination of nano-waste
Amit Patwa
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Alain Thiéry
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Fabien Lombard
,
Martin K.S. Lilley
,
Claire Boisset
et al.
Article dans une revue
hal-01202430
v1
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Respiration demands increase significantly with both temperature and mass in the invasive ctenophore Mnemiopsis leidyi
M. K. S. Lilley
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Delphine Thibault
,
F. Lombard
Article dans une revue
hal-03502770
v1
|
|
Individual shrinking to enhance population survival: quantifying the reproductive and metabolic expenditures of a starving jellyfish, Pelagia noctiluca
Martin K. S. Lilley
,
Amanda Elineau
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Martina Ferraris
,
Alain Thiéry
,
Lars Stemmann
et al.
Article dans une revue
hal-03502757
v1
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Culture and growth of the jellyfish Pelagia noctiluca in the laboratory
Martin K. S. Lilley
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Martina Ferraris
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Amanda Elineau
,
Léo Berline
,
Perrine Cuvilliers
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Article dans une revue
hal-03502778
v1
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Copepods use chemical trails to find sinking marine snow aggregates
M. Koski
,
T. Kiorboe
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Fabien Lombard
Article dans une revue
hal-03502646
v1
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|
Seasonal dynamics of early life stages of invasive and native ctenophores give clues to invasion and bloom potential in the Baltic Sea
Cornelia Jaspers
,
Matilda Haraldsson
,
Fabien Lombard
,
Soren Bolte
,
Thomas Kirboe
Article dans une revue
hal-03502633
v1
|
|
Mid-Holocene and last glacial maximum climate simulations with the IPSL model: part II: model-data comparisons
Masa Kageyama
,
Pascale Braconnot
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Laurent Bopp
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Véronique Mariotti
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Tilla Roy
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Article dans une revue
istex
hal-00873380
v1
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Effect of Type and Concentration of Ballasting Particles on Sinking Rate of Marine Snow Produced by the Appendicularian Oikopleura dioica
Fabien Lombard
,
Lionel Guidi
,
Thomas Kiørboe
Article dans une revue
hal-01771755
v1
|
|
Mid-Holocene and Last Glacial Maximum climate simulations with the IPSL model--part I: comparing IPSL_CM5A to IPSL_CM4
Masa Kageyama
,
Pascale Braconnot
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Laurent Bopp
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Arnaud Caubel
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Marie-Alice Foujols
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Article dans une revue
istex
hal-00873377
v1
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Distribution of Pelagia noctiluca (Cnidaria, Scyphozoa) in the Ligurian Sea (NW Mediterranean Sea)
Martina Ferraris
,
L. Berline
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Fabien Lombard
Article dans une revue
hal-00740688
v1
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Oxygen respiration rates of benthic foraminifera as measured with oxygen microsensors
E. Geslin
,
N. Risgaard-Petersen
,
F. Lombard
,
E. Metzger
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Dewi Langlet
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Journal of Experimental Marine Biology and Ecology, 2011, 396 (2), pp.108-114
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Holocene evolution of summer winds and marine productivity in the tropical Indian Ocean in response to insolation forcing: data-model comparison
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Modelling planktic foraminifer growth and distribution using an ecophysiological multi-species approach
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Grazer cues induce stealth behavior in marine dinoflagellates
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Proceedings of the National Academy of Sciences of the United States of America, 2011, 108 (10), pp.4030-4034. ⟨10.1073/pnas.1011870108⟩
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hal-04020173
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Experimental and modeling evidence of appendicularian-ciliate interactions
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Marine snow originating from appendicularian houses: Age-dependent settling characteristics
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Impact of appendicularians on detritus and export fluxes: a model approach at DyFAMed site
L. Berline
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hal-00655066
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Effect of carbonate ion concentration and irradiance on calcification in planktonic foraminifera
F. Lombard
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Modelling the temperature dependent growth rates of planktic foraminifera
Fabien Lombard
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hal-02913780
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Particle fluxes and recent sediment accumulation on the Aquitanian margin of Bay of Biscay
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Appendicularian ecophysiology I
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Antoine Sciandra
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Gabriel Gorsky
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Planktic foraminiferal production along an offshore–onshore transect in the south-eastern Bay of Biscay
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hal-02959695
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Temperature effect on respiration and photosynthesis of the symbiont-bearing planktonic foraminifera $Globigerinoides\ ruber$ , $Orbulina\ universa$ , and $Globigerinella\ siphonifera$
F. Lombard
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Elisabeth Michel
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L. Labeyrie
Article dans une revue
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Appendicularian ecophysiology. II. Modeling nutrition, metabolism, growth and reproduction of the appendicularian Oikopleura dioica
Fabien Lombard
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Antoine Sciandra
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Article dans une revue
istex
hal-01893831
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Global zoogeography of fragile macrozooplankton in the upper 100-1000 m inferred from the underwater video profiler
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Influence of body mass, food concentration, temperature and filtering activity on the oxygen uptake of the appendicularian Oikopleura dioica
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G. Gorsky
Article dans une revue
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