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florent morio

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Cryptococcus neoformans Infections Differ Among Human Immunodeficiency Virus (HIV)–Seropositive and HIV-Seronegative Individuals: Results From a Nationwide Surveillance Program in France

Olivier Paccoud , Marie Desnos-Ollivier , Sophie Cassaing , Karine Boukris-Sitbon , Alexandre Alanio
Open Forum Infectious Diseases, 2024, 11 (2), pp.ofad658. ⟨10.1093/ofid/ofad658⟩
Article dans une revue hal-04473848v1

Invasive bone and joint infections from the French Scedosporiosis/lomentosporiosis Observational Study (SOS) cohort: no mortality with long-term antifungal treatment and surgery

Damien Blez , Didier Bronnimann , Blandine Rammaert , Valérie Zeller , Laurence Delhaes
Medical Mycology, 2023, 61 (3), ⟨10.1093/mmy/myad023⟩
Article dans une revue hal-04065351v1
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Atovaquone exposure and Pneumocystis jirovecii cytochrome b mutations: French data and review of the literature

Pierre Bonnet , Claire Hoffmann , Nathan Le Nan , Lorenn Bellamy , Gautier Hoarau
Medical Mycology, 2023, 61 (9), ⟨10.1093/mmy/myad095⟩
Article dans une revue hal-04301211v1

Invasive bone and joint infections from the French Scedosporiosis/lomentosporiosis Observational Study (SOS) cohort: no mortality with long-term antifungal treatment and surgery

Damien Blez , Didier Bronnimann , Blandine Rammaert , Valérie Zeller , Laurence Delhaes
Medical Mycology, 2023, 61 (3), ⟨10.1093/mmy/myad023⟩
Article dans une revue hal-04481972v1
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Immune alveolitis in interstitial lung disease: an attractive cytological profile in immunocompromised patients

Antoine Moui , Stéphanie Dirou , Christine Sagan , Renan Liberge , Claire Defrance
BMC Pulmonary Medicine, 2022, 22 (1), pp.79. ⟨10.1186/s12890-022-01871-w⟩
Article dans une revue inserm-03693149v1

Une expulsion bien singulière d'un ver adulte de Loa loa

Arthur Aubry , Charles Hervochon , Marie Chauveau , Marie Denis-Musquer , Fakhri Jeddi
Revue Francophone des Laboratoires, 2022
Article dans une revue hal-03630278v1
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Selecting a multiplex PCR panel for accurate molecular diagnosis of intestinal protists: a comparative study of Allplex ® (Seegene ® ), G-DiaParaTrio (Diagenode ® ), and RIDA ® GENE (R-Biopharm ® ) assays and microscopic examination

Nicolas Argy , Céline Nourrisson , Ahmed Aboubacar , Philippe Poirier , Stéphane Valot
Parasite, 2022, 29, pp.5. ⟨10.1051/parasite/2022003⟩
Article dans une revue hal-03572136v1
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Active Surveillance Program to Increase Awareness on Invasive Fungal Diseases: the French RESSIF Network (2012 to 2018)

Stéphane Bretagne , Karine Sitbon , Marie Desnos-Ollivier , Dea Garcia-Hermoso , Valérie Letscher-Bru
mBio, 2022, 13 (3), pp.e0092022. ⟨10.1128/mbio.00920-22⟩
Article dans une revue hal-03658122v1
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Evaluation of serum Mucorales PCR for the diagnosis of Mucormycoses: The MODIMUCOR prospective trial

Laurence Millon , Denis Caillot , Ana Berceanu , Stéphane Bretagne , Fanny Lanternier
Clinical Infectious Diseases, 2022, 75 (5), pp.777-785. ⟨10.1093/cid/ciab1066⟩
Article dans une revue hal-03528144v1

Evaluation of Serum Mucorales Polymerase Chain Reaction (PCR) for the Diagnosis of Mucormycoses: The MODIMUCOR Prospective Trial

Laurence Millon , Denis Caillot , Ana Berceanu , Stéphane Bretagne , Fanny Lanternier
Clinical Infectious Diseases, 2022, ⟨10.1093/cid/ciab1066⟩
Article dans une revue hal-03630277v1
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Fungal infections in mechanically ventilated patients with COVID-19 during the first wave: the French multicentre MYCOVID study

Jean-Pierre Gangneux , Eric Dannaoui , Arnaud Fekkar , Charles-Edouard Luyt , Françoise Botterel
The Lancet Respiratory Medicine, 2022, 10 (2), pp.180-190. ⟨10.1016/s2213-2600(21)00442-2⟩
Article dans une revue inserm-03587204v1
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The Novodiag® Stool parasites assay, an innovative high-plex technique for fast detection of protozoa, helminths and microsporidia in stool samples: a retrospective and prospective study

Sophie Hartuis , Rose-Anne Lavergne , Céline Nourrisson , Jaco Verweij , Guillaume Desoubeaux
Parasite, 2022, 29, pp.1-8. ⟨10.1051/parasite/2022026⟩
Article dans une revue hal-03668002v1

Collateral consequences of agricultural fungicides on pathogenic yeasts: A One Health perspective to tackle azole resistance

Débora Castelo‐branco , Shawn Lockhart , Yee‐chun Chen , Daniel Santos , Ferry Hagen
Mycoses, 2021, 65, pp.303 - 311. ⟨10.1111/myc.13404⟩
Article dans une revue hal-03630279v1

Highly conserved gsc1 gene of Pneumocystis jirovecii in patients with or without prior exposure to Echinocandins

Pierre Bonnet , Solène Le Gal , Claire Hoffmann , Florent Morio , Fouleymata Diabira
Antimicrobial Agents and Chemotherapy, 2021, ⟨10.1128/AAC.01563-21⟩
Article dans une revue hal-03411559v1
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COVID-19-Associated Pulmonary Aspergillosis, Fungemia, and Pneumocystosis in the Intensive Care Unit: a Retrospective Multicenter Observational Cohort during the First French Pandemic Wave

Stéphane Bretagne , Karine Sitbon , Françoise Botterel , Sarah Dellière , Valérie Letscher-Bru
Microbiology Spectrum, 2021, 9 (2), pp.e0113821. ⟨10.1128/Spectrum.01138-21⟩
Article dans une revue hal-03404538v1

Serum (1 → 3)‐β‐D‐glucan could be useful to rule out invasive candidiasis in neonates with an adapted cut‐off

Pauline Cliquennois , Pauline Scherdel , Rose‐anne Lavergne , Cyril Flamant , Florent Morio
Acta Paediatrica, 2021, 110 (1), pp.79-84. ⟨10.1111/apa.15321⟩
Article dans une revue hal-03562034v1

Epidemiological and clinical study of microsporidiosis in French kidney transplant recipients from 2005 to 2019: TRANS‐SPORE registry

Clément Dumond , Florence Aulagnon , Isabelle Etienne , Anne‐elisabeth Heng , Marie‐elisabeth Bougnoux
Transplant Infectious Disease, 2021, 23 (5), pp.e13708. ⟨10.1111/tid.13708⟩
Article dans une revue hal-03419373v1
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Update on the diagnosis of parasitic and fungal infections

Emilie Fréalle , Stéphane Valot , Renaud Piarroux , Jean Menotti , Laurence Lachaud
Annales de Biologie Clinique, 2020, 78 (3), pp.299-313. ⟨10.1684/abc.2020.1554⟩
Article dans une revue hal-03610929v1

The CRISPR toolbox in medical mycology: State of the art and perspectives

Florent Morio , Lisa Lombardi , Geraldine Butler
PLoS Pathogens, 2020, 16 (1), pp.e1008201. ⟨10.1371/journal.ppat.1008201⟩
Article dans une revue hal-03842369v1
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Comparison of MultiLocus Sequence Typing (MLST) and Microsatellite Length Polymorphism (MLP) for Pneumocystis jirovecii genotyping

Maud Gits-Muselli , Pascal Campagne , Marie Desnos-Ollivier , Patrice Le Pape , Stéphane Bretagne
Computational and Structural Biotechnology Journal, 2020, 18, pp.2890-2896. ⟨10.1016/j.csbj.2020.10.005⟩
Article dans une revue pasteur-03243552v1

Dear medical mycologists, it is time to look outside the box

Florent Morio
FEMS Yeast Research, 2020, 20 (1), ⟨10.1093/femsyr/foz080⟩
Article dans une revue hal-03842042v1

Invasive aspergillosis due to Aspergillus section Usti: a multicenter retrospective study

Emmanouil Glampedakis , Sophie Cassaing , Arnaud Fekkar , Eric Dannaoui , Marie-Elisabeth Bougnoux
Clinical Infectious Diseases, 2020, ⟨10.1093/cid/ciaa230⟩
Article dans une revue hal-02543503v1
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Scedosporiosis/lomentosporiosis observational study (SOS): Clinical significance of Scedosporium species identification

Didier Bronnimann , Dea Garcia-Hermoso , Françoise Dromer , Fanny Lanternier , Laurence Maulin
Medical Mycology, 2020, 59 (5), pp.486 - 497. ⟨10.1093/mmy/myaa086⟩
Article dans une revue pasteur-03222501v1

Signaling Pathways Governing the Caspofungin Paradoxical Effect in Aspergillus fumigatus

Nicolas Papon , Florent Morio , Dominique Sanglard
mBio, 2020, 11 (4), pp.1816-20. ⟨10.1128/mBio.01816-20⟩
Article dans une revue hal-02942844v1

Not All Clusters of Pneumocystis Pneumonia Cases are Related to Nosocomial Infections: A Proposal for a Pragmatic Approach to Investigate Possible Clonal Clusters

Gilles Nevez , Florent Morio , Pierre Bonnet , Nathan Le Nan , François-Xavier Blance
Journal of Hospital Infection, 2020, ⟨10.1016/j.jhin.2020.11.022⟩
Article dans une revue hal-03062660v1
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Genotyping Approach for Potential Common Source of Enterocytozoon bieneusi Infection in Hematology Unit

Guillaume Desoubeaux , Céline Nourrisson , Maxime Moniot , Marie-Alix de Kyvon , Virginie Bonnin
Emerging Infectious Diseases, 2019, 25 (9), pp.1625-1631. ⟨10.3201/eid2509.190311⟩
Article dans une revue hal-02439508v1

Assessment of the first commercial multiplex PCR kit (ParaGENIE Crypto-Micro Real-Time PCR) for the detection of Cryptosporidium spp., Enterocytozoon bieneusi, and Encephalitozoon intestinalis from fecal samples

Florent Morio , Philippe Poirier , Yohann Le Govic , Adrien Laude , Stephane Valot
Diagnostic Microbiology and Infectious Disease, 2019, 95 (1), pp.34-37. ⟨10.1016/j.diagmicrobio.2019.04.004⟩
Article dans une revue hal-02483139v1
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Prevalence, geographic risk factor, and development of a standardized protocol for fungal isolation in cystic fibrosis: Results from the international prospective study “MFIP”

Laurence Delhaes , Kada Touati , Muriel Cornet , Rafael Cantón , Françoise Botterel
Journal of Cystic Fibrosis, 2019, 18 (2), pp.212-220. ⟨10.1016/j.jcf.2018.10.001⟩
Article dans une revue hal-02316590v1

Rapid diagnostic tests relying on antigen detection from stool as an efficient point of care testing strategy for giardiasis and cryptosporidiosis? Evaluation of a new immunochromatographic duplex assay

Adeline Goudal , Adrien Laude , Stéphane Valot , Guillaume Desoubeaux , Nicolas Argy
Diagnostic Microbiology and Infectious Disease, 2019, 93 (1), pp.33-36. ⟨10.1016/j.diagmicrobio.2018.07.012⟩
Article dans une revue hal-01987699v1

PCR-based detection of Aspergillus fumigatus and absence of azole resistance due to TR 34 /L98H in a french multicenter cohort of 137 patients with fungal rhinosinusitis

Florent Morio , Eric Dannaoui , Taieb Chouaki , Estelle Cateau , Olivier Malard
Mycoses, 2018, 61 (1), pp.30 - 34. ⟨10.1111/myc.12702⟩
Article dans une revue hal-01698243v1

Human cryptosporidiosis in immunodeficient patients in France (2015–2017)

Damien Costa , Romy Razakandrainibe , Marc Sautour , Stéphane Valot , Louise Basmaciyan
Experimental Parasitology, 2018, 192, pp.108-112. ⟨10.1016/j.exppara.2018.08.001⟩
Article dans une revue hal-02902544v1

Home Environment as a Source of Life-Threatening Azole-Resistant Aspergillus fumigatus in Immunocompromised Patients

Rose-Anne Lavergne , Taieb Chouaki , Ferry Hagen , Benedicte Toublanc , Herve Dupont
Clinical Infectious Diseases, 2017, 64 (1), pp.76-78. ⟨10.1093/cid/ciw664⟩
Article dans une revue hal-03577562v1
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Diversity of Pneumocystis jirovecii Across Europe: A Multicentre Observational Study

Alexandre Alanio , Maud Gits-Muselli , Nicolas Guigue , Marie Desnos-Ollivier , Enrique Calderon
EBioMedicine, 2017, 22, pp.155-163. ⟨10.1016/j.ebiom.2017.06.027⟩
Article dans une revue hal-01852128v1

A misleading false-negative result of Pneumocystis real-time PCR assay due to a rare punctual mutation: A French multicenter study.

Solène Le Gal , Florence Robert-Gangneux , Yann Pepino , Sorya Belaz , Céline Damiani
Medical Mycology, 2017, 55 (2), pp.180-184. ⟨10.1093/mmy/myw051⟩
Article dans une revue hal-01477200v1
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Colonization with the enteric protozoa Blastocystis is associated with increased diversity of human gut bacterial microbiota

Christophe Audebert , Gaël Even , Amandine Cian , Dima El Safadi , Gabriela Certad
Scientific Reports, 2016, 6, pp.25255. ⟨10.1038/srep25255⟩
Article dans une revue hal-01363189v1
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Prevalence, risk factors for infection and subtype distribution of the intestinal parasite Blastocystis sp. from a large-scale multi-center study in France

Dima El Safadi , Amandine Cian , Céline Nourrisson , Bruno Pereira , Christelle Morelle
BMC Infectious Diseases, 2016, 16 (1), pp.451. ⟨10.1186/s12879-016-1776-8⟩
Article dans une revue hal-01368323v1

Epidemiological Outbreaks of Pneumocystis jirovecii Pneumonia Are Not Limited to Kidney Transplant Recipients: Genotyping Confirms Common Source of Transmission in a Liver Transplantation Unit

Guillaume Desoubeaux , Manon Dominique , Florent Morio , Rose-Anne Thepault , Claire Franck-Martel
Journal of Clinical Microbiology, 2016, ⟨10.1128/JCM.00133-16⟩
Article dans une revue hal-02443946v1

Identification of cryptic Candida species by MALDI-TOF mass spectrometry, not all MALDI-TOF systems are the same: focus on the C. parapsilosis species complex

Marion Haas , Frederic Grenouillet , Sophie Loubersac , Beatriz Ariza , Line Pepin-Puget
Diagnostic Microbiology and Infectious Disease, 2016, 86 (4), pp.385 - 386
Article dans une revue hal-01397030v1
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First Description of Azole-Resistant Aspergillus fumigatus Due to TR 46 /Y121F/T289A Mutation in France

Rose-Anne Lavergne , Florent Morio , Loïc Favennec , Stéphane Dominique , Jacques Meis
Antimicrobial Agents and Chemotherapy, 2015, 59 (7), pp.4331-4335. ⟨10.1128/AAC.00127-15⟩
Article dans une revue hal-02317942v1

Longitudinal study assessing the return of chloroquine susceptibility of Plasmodium falciparum in isolates from travellers returning from West and Central Africa, 2000–2011

Dima El Safadi , Amandine Cian , Céline Nourrisson , Bruno Pereira , Christelle Morelle
Malaria Journal, 2013, 12 (1), pp.35. ⟨10.1186/1475-2875-12-35⟩
Article dans une revue hal-03528300v1

High prevalence of triazole resistance in Aspergillus fumigatus, especially mediated by TR/L98H, in a French cohort of patients with cystic fibrosis

Florent Morio , Guillaume Ghislain Aubin , Isabelle Danner-Boucher , Alain Haloun , Emilie Sacchetto
Journal of Antimicrobial Chemotherapy, 2012, 67 (8), pp.1870-1873. ⟨10.1093/jac/dks160⟩
Article dans une revue pasteur-02262445v1

Phaeohyphomycosis due to Exophiala xenobiotica as a cause of fungal arthritis in an HIV-infected patient

Florent Morio , Jean-Yves Le Berre , Dea Garcia-Hermoso , Mohammad Javad Najafzadeh , Sybren G. de Hoog
Medical Mycology, 2012, 50 (5), pp.513-517. ⟨10.3109/13693786.2011.648218⟩
Article dans une revue pasteur-02262346v1

Design, Synthesis, and in vitro Antifungal Activity of 1-[(4-Substituted-benzyl)methylamino]-2-(2,4-difluorophenyl)-3-(1H-1,2,4-triazol-1-yl)propan-2-ols

Rémi Guillon , Fabrice Pagniez , Francis Giraud , Damien Crépin , Carine Picot
ChemMedChem, 2011, 6 (5), pp.816 - 825. ⟨10.1002/cmdc.201000530⟩
Article dans une revue hal-01689176v1

Fatal Invasive Infection with Fungemia Due to Microascus cirrosus after Heart and Lung Transplantation in a Patient with Cystic Fibrosis

Charline Miossec , Florent Morio , Thierry Lepoivre , Patrice Le Pape , Dea Garcia-Hermoso
Journal of Clinical Microbiology, 2011, 49 (7), pp.2743-2747. ⟨10.1128/JCM.00127-11⟩
Article dans une revue pasteur-02262481v1

Disseminated Scedosporium/Pseudallescheria Infection after Double-Lung Transplantation in Patients with Cystic Fibrosis

Florent Morio , Delphine Horeau-Langlard , Françoise Gay-Andrieu , Jean-Philippe Talarmin , Alain Haloun
Journal of Clinical Microbiology, 2010, 48 (5), pp.1978 - 1982. ⟨10.1128/JCM.01840-09⟩
Article dans une revue hal-03134637v1