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The diagnosis of mucormycosis by PCR in patients at risk: a systematic review and meta-analysis
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The epidemiology of fungal infections in transplant patients
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Fumagillin Shortage: How to Treat Enterocytozoon bieneusi Microsporidiosis in Solid Organ Transplant Recipients in 2024?
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Cryptococcus neoformans Infections Differ Among Human Immunodeficiency Virus (HIV)–Seropositive and HIV-Seronegative Individuals: Results From a Nationwide Surveillance Program in France
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Precise genome editing underlines the distinct contributions of mutations in ERG11 , ERG3 , MRR1 , and TAC1 genes to antifungal resistance in Candida parapsilosis
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Use of the Mucorales qPCR on blood to screen high-risk hematology patients is associated with better survival
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Epidemiology and prognostic factors of mucormycosis in France (2012–2022): a cross-sectional study nested in a prospective surveillance programme
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Heteroresistance: a hidden cause behind antifungal prophylaxis failure
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Laboratory practices for the diagnosis and management of mucormycosis in France, 2024
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Should We Reconsider Pneumocystis Pneumonia Presentation and Treatment According to Its Underlying Disease?
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Interlaboratory assays from the fungal PCR Initiative and the Modimucor Study Group to improve qPCR detection of Mucorales DNA in serum: one more step toward standardization
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Epidemiology and prognostic factors of mucormycosis in France (2012–2022): a cross-sectional study nested in a prospective surveillance programme
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Features of cryptococcosis among 652 HIV-seronegative individuals in France: a cross-sectional observational study (2005-2020)
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Plasmodium ovale spp dhfr mutations associated with reduced susceptibility to pyrimethamine in sub-Saharan Africa: a retrospective genetic epidemiology and functional study
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Transthyretin amyloid cardiomyopathy in France: A cross-sectional multi-centre study (333 patients)
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Characteristics and Prognosis Factors of Pneumocystis jirovecii Pneumonia According to Underlying Disease
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Improving Diagnosis of Pulmonary Mucormycosis
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Acquired fluconazole resistance and genetic clustering in Diutina (Candida) catenulata from clinical samples
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Invasive fungal diseases in patients with autoimmune diseases: a case series from the French RESSIF network
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Atovaquone exposure and Pneumocystis jirovecii cytochrome b mutations: French data and review of the literature
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Invasive bone and joint infections from the French Scedosporiosis/lomentosporiosis Observational Study (SOS) cohort: no mortality with long-term antifungal treatment and surgery
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Draft Genome Sequence of the Fluconazole-Resistant Yarrowia lipolytica Clinical Isolate CBS 18115
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Gradient concentration strip–specific epidemiological cut-off values of antifungal drugs in various yeast species and five prevalent Aspergillus species complexes
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Evaluation of Serum Mucorales Polymerase Chain Reaction (PCR) for the Diagnosis of Mucormycoses: The MODIMUCOR Prospective Trial
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Article dans une revue
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Epidemiology and Clinical Impact of Respiratory Coinfections at Diagnosis of Pneumocystis jirovecii Pneumonia
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Article dans une revue
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Highly Conserved gsc1 Gene of Pneumocystis jirovecii in Patients with or without Prior Exposure to Echinocandins
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Article dans une revue
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Fungal infections in mechanically ventilated patients with COVID-19 during the first wave: the French multicentre MYCOVID study
Jean-Pierre Gangneux
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Article dans une revue
inserm-03587204
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Draft Genome Sequence of the Fluconazole-Resistant Candida palmioleophila Clinical Isolate CBS 18098
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Article dans une revue
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The Novodiag® Stool parasites assay, an innovative high-plex technique for fast detection of protozoa, helminths and microsporidia in stool samples: a retrospective and prospective study
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Article dans une revue
hal-03668002
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Immune alveolitis in interstitial lung disease: an attractive cytological profile in immunocompromised patients
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inserm-03693149
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Systematic Analysis of Copy Number Variations in the Pathogenic Yeast Candida parapsilosis Identifies a Gene Amplification in <i>RTA3</i> That is Associated with Drug Resistance
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Evaluation of serum Mucorales PCR for the diagnosis of Mucormycoses: The MODIMUCOR prospective trial
Laurence Millon
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Ana Berceanu
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Stéphane Bretagne
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Article dans une revue
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A summary of cryptosporidiosis outbreaks reported in France and overseas departments, 2017–2020
Damien Costa
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Article dans une revue
hal-03859494
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Active Surveillance Program to Increase Awareness on Invasive Fungal Diseases: the French RESSIF Network (2012 to 2018)
Stéphane Bretagne
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Article dans une revue
hal-03658122
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Selecting a multiplex PCR panel for accurate molecular diagnosis of intestinal protists: a comparative study of Allplex ® (Seegene ® ), G-DiaParaTrio (Diagenode ® ), and RIDA ® GENE (R-Biopharm ® ) assays and microscopic examination
Nicolas Argy
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Article dans une revue
hal-03572136
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De novo Nanopore Genome Sequencing of the Clinical Diutina catenulata Type-strain CBS565
Sander Boden
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Article dans une revue
hal-04758886
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Une expulsion bien singulière d'un ver adulte de Loa loa
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hal-03630278
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Impact of TR34/L98H, TR46/Y121F/T289A and TR53 Alterations in Azole-Resistant Aspergillus fumigatus on Sterol Composition and Modifications after In Vitro Exposure to Itraconazole and Voriconazole
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hal-03778408
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Cryptococcal Meningitis in Kidney Transplant Recipients: A Two-Decade Cohort Study in France
Laurène Tardieu
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Article dans une revue
hal-03789427
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Epidemiological and clinical study of microsporidiosis in French kidney transplant recipients from 2005 to 2019: TRANS‐SPORE registry
Clément Dumond
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Article dans une revue
hal-03419373
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Collateral consequences of agricultural fungicides on pathogenic yeasts: A One Health perspective to tackle azole resistance
Débora Castelo‐branco
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Article dans une revue
hal-03630279
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Serum (1 → 3)‐β‐D‐glucan could be useful to rule out invasive candidiasis in neonates with an adapted cut‐off
Pauline Cliquennois
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Cyril Flamant
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Article dans une revue
hal-03562034
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Interlaboratory evaluation of Mucorales PCR assays for testing serum specimens
S Rocchi
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Article dans une revue
hal-03123965
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Highly conserved gsc1 gene of Pneumocystis jirovecii in patients with or without prior exposure to Echinocandins
Pierre Bonnet
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Solène Le Gal
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Claire Hoffmann
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Florent Morio
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Fouleymata Diabira
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Article dans une revue
hal-03411559
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Commercial Simplex and Multiplex PCR Assays for the Detection of Intestinal Parasites Giardia intestinalis, Entamoeba spp., and Cryptosporidium spp.: Comparative Evaluation of Seven Commercial PCR Kits with Routine In-House Simplex PCR Assays
Louise Basmaciyan
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Article dans une revue
hal-03751896
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The CRISPR toolbox in medical mycology: State of the art and perspectives
Florent Morio
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Article dans une revue
hal-03842369
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A proposal for pragmatic investigation of possible clonal clusters of pneumocystis pneumonia cases
G. Nevez
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Article dans une revue
hal-03790509
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Hormographiella aspergillata: an emerging basidiomycete in the clinical setting? A case report and literature review
Maxime Moniot
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Article dans une revue
hal-03945682
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Update on the diagnosis of parasitic and fungal infections
Emilie Fréalle
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Renaud Piarroux
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Article dans une revue
hal-03610929
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Not All Clusters of Pneumocystis Pneumonia Cases are Related to Nosocomial Infections: A Proposal for a Pragmatic Approach to Investigate Possible Clonal Clusters
Gilles Nevez
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Pierre Bonnet
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Nathan Le Nan
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Article dans une revue
hal-03062660
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Dear medical mycologists, it is time to look outside the box
Florent Morio
Article dans une revue
hal-03842042
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Draft Genome Sequence of the Yeast Kazachstania telluris CBS 16338 Isolated from Forest Soil in Ireland
Florent Morio
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Caoimhe O’brien
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Geraldine Butler
Article dans une revue
hal-03842559
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Signaling Pathways Governing the Caspofungin Paradoxical Effect in Aspergillus fumigatus
Nicolas Papon
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Florent Morio
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Dominique Sanglard
Article dans une revue
hal-02942844
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Comparison of MultiLocus Sequence Typing (MLST) and Microsatellite Length Polymorphism (MLP) for Pneumocystis jirovecii genotyping
Maud Gits-Muselli
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Pascal Campagne
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Patrice Le Pape
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Stéphane Bretagne
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Article dans une revue
pasteur-03243552
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Ibrutinib, a Bruton's tyrosine kinase inhibitor, a new risk factor for cryptococcosis
Julia Brochard
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Florent Morio
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Julien Mahe
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Patrice Le Pape
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Article dans une revue
hal-03492593
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Species Distribution and Comparison between EUCAST and Gradient Concentration Strips Methods for Antifungal Susceptibility Testing of 112 Aspergillus Section Nigri Isolates
B. Carrara
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S. Imbert
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Florent Morio
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Milène Sasso
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Article dans une revue
(data paper)
hal-04850428
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Scedosporiosis/lomentosporiosis observational study (SOS): Clinical significance of Scedosporium species identification
Didier Bronnimann
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Françoise Dromer
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Fanny Lanternier
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Laurence Maulin
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Article dans une revue
pasteur-03222501
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Invasive aspergillosis due to Aspergillus section Usti: a multicenter retrospective study
Emmanouil Glampedakis
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Sophie Cassaing
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Arnaud Fekkar
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Eric Dannaoui
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Marie-Elisabeth Bougnoux
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Article dans une revue
hal-02543503
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Prevalence, geographic risk factor, and development of a standardized protocol for fungal isolation in cystic fibrosis: Results from the international prospective study “MFIP”
Laurence Delhaes
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Kada Touati
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Muriel Cornet
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Rafael Cantón
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Françoise Botterel
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Article dans une revue
hal-02316590
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Fungicide-driven alterations in azole-resistant Aspergillus fumigatus are related to vegetable crops in Colombia, South America
Carlos Alvarez-Moreno
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Rose-Anne Lavergne
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Ferry Hagen
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Florent Morio
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Jacques Meis
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Article dans une revue
hal-04712281
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Rapid diagnostic tests relying on antigen detection from stool as an efficient point of care testing strategy for giardiasis and cryptosporidiosis? Evaluation of a new immunochromatographic duplex assay
Adeline Goudal
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Guillaume Desoubeaux
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Article dans une revue
hal-01987699
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One year prospective survey of azole resistance in Aspergillus fumigatus at a French cystic fibrosis reference centre: prevalence and mechanisms of resistance
Rose-Anne Lavergne
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Florent Morio
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D. Horeau-Langlard
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Article dans une revue
hal-04712354
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Comparison between MALDI-TOF MS and MicroScan in the identification of emerging and multidrug resistant yeasts in a fourth-level hospital in Bogotá, Colombia
Andrés Ceballos-Garzón
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Florent Morio
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Edna Zamora-Cruz
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Article dans une revue
hal-04718726
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Precise genome editing using a CRISPR-Cas9 method highlights the role of CoERG11 amino acid substitutions in azole resistance in Candida orthopsilosis
Florent Morio
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Lisa Lombardi
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Ulrike Binder
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Cédric Logé
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Estelle Robert
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Article dans une revue
hal-03827474
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Genotyping Approach for Potential Common Source of Enterocytozoon bieneusi Infection in Hematology Unit
Guillaume Desoubeaux
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Céline Nourrisson
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Maxime Moniot
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Marie-Alix de Kyvon
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Article dans une revue
hal-02439508
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Assessment of the first commercial multiplex PCR kit (ParaGENIE Crypto-Micro Real-Time PCR) for the detection of Cryptosporidium spp., Enterocytozoon bieneusi, and Encephalitozoon intestinalis from fecal samples
Florent Morio
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Philippe Poirier
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Yohann Le Govic
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Adrien Laude
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Stephane Valot
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Article dans une revue
hal-02483139
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Human cryptosporidiosis in immunodeficient patients in France (2015–2017)
Damien Costa
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Romy Razakandrainibe
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Marc Sautour
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Stéphane Valot
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Louise Basmaciyan
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Article dans une revue
hal-02902544
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Evaluation of a new multiplex PCR assay (ParaGENIE G-Amoeba Real-Time PCR kit) targeting Giardia intestinalis, Entamoeba histolytica and Entamoeba dispar/Entamoeba moshkovskii from stool specimens: evidence for the limited performances of microscopy-based approach for amoeba species identification
Florent Morio
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S. Valot
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A. Laude
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Guillaume Desoubeaux
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Article dans une revue
hal-01987706
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Azole Resistance in Aspergillus fumigatus in Patients with Cystic Fibrosis: A Matter of Concern?
A. Hamprecht
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O. Bader
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Patrice Le Pape
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Article dans une revue
hal-03997691
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First report of sporadic cases of Candida auris in Colombia
Claudia Parra-Giraldo
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Sandra Valderrama
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Gloria Cortes-Fraile
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Javier Garzón
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Article dans une revue
hal-03795018
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PCR-based detection of Aspergillus fumigatus and absence of azole resistance due to TR 34 /L98H in a french multicenter cohort of 137 patients with fungal rhinosinusitis
Florent Morio
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Eric Dannaoui
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Taieb Chouaki
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Estelle Cateau
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Olivier Malard
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Article dans une revue
hal-01698243
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Molecular basis of antifungal drug resistance in yeasts
Florent Morio
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Rasmus Hare Jensen
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Patrice Le Pape
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Maiken Cavling Arendrup
Article dans une revue
hal-03842639
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A misleading false-negative result of Pneumocystis real-time PCR assay due to a rare punctual mutation: A French multicenter study.
Solène Le Gal
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Florence Robert-Gangneux
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Yann Pepino
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Sorya Belaz
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Céline Damiani
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Article dans une revue
hal-01477200
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Thermothelomyces thermophila human infections
C. Nourrisson
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D. Garcia-Hermoso
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Florent Morio
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C. Kauffmann-Lacroix
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N. Berrette
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Article dans une revue
hal-01852116
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Home Environment as a Source of Life-Threatening Azole-Resistant Aspergillus fumigatus in Immunocompromised Patients
Rose-Anne Lavergne
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Taieb Chouaki
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Ferry Hagen
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Benedicte Toublanc
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Herve Dupont
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Article dans une revue
hal-03577562
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Diversity of Pneumocystis jirovecii Across Europe: A Multicentre Observational Study
Alexandre Alanio
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Answer to May 2016 Photo Quiz
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Early diagnosis and monitoring of mucormycosis by detection of circulating DNA in serum: retrospective analysis of 44 cases collected through the French Surveillance Network of Invasive Fungal Infections (RESSIF)
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First Description of Azole-Resistant Aspergillus fumigatus Due to TR 46 /Y121F/T289A Mutation in France
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Successful treatment with fumagillin of the first pediatric case of digestive microsporidiosis in a liver-kidney transplant
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Phaeohyphomycosis due to Exophiala xenobiotica as a cause of fungal arthritis in an HIV-infected patient
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Amino acid substitutions in the Candida albicans sterol 5,6-desaturase (Erg3p) confer azole resistance: characterization of two novel mutants with impaired virulence
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High prevalence of triazole resistance in Aspergillus fumigatus, especially mediated by TR/L98H, in a French cohort of patients with cystic fibrosis
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Fatal Invasive Infection with Fungemia Due to Microascus cirrosus after Heart and Lung Transplantation in a Patient with Cystic Fibrosis
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Design, Synthesis, and in vitro Antifungal Activity of 1-[(4-Substituted-benzyl)methylamino]-2-(2,4-difluorophenyl)-3-(1H-1,2,4-triazol-1-yl)propan-2-ols
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Disseminated Scedosporium/Pseudallescheria Infection after Double-Lung Transplantation in Patients with Cystic Fibrosis
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Screening for amino acid substitutions in the Candida albicans Erg11 protein of azole-susceptible and azole-resistant clinical isolates: new substitutions and a review of the literature
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