FS

Filipi Soares

38
Documents
Affiliations actuelles
  • Mathématiques, Informatique et STatistique pour l'Environnement et l'Agronomie (MISTEA)
  • University of Twente
Contact

Présentation

Filipi Miranda Soares holds a Ph.D. in Computer Engineering from the University of São Paulo, Brazil, and is currently pursuing a second Ph.D. diploma in Computer Science at the University of Twente, the Netherlands, as part of a double degree program. He is also a researcher at INRAE (French National Research Institute for Agriculture, Food and Environment) in Montpellier, working with the MISTEA research group. His work focuses on Semantic Web technologies, leveraging Python-based tools and generative AI to automate tasks in ontology engineering, including SPARQL query generation from natural language. Filipi has contributed to several international initiatives, such as Biodiversity Information Standards (TDWG) and the Cross-Domain Integration (CDI) Working Group of the DDI Alliance. He has been actively involved in the development of FAIR semantic artefacts, including the Agricultural Product Types Ontology (APTO), the Agriculture and Livestock Metadata Element Set (Almes Core), the Plant-Pollinator Interactions Vocabulary, and the DDI-CDI standard. He has experience applying the FAIR Data Principles and participated in the WorldFAIR project under the Agricultural Biodiversity Working Group. In addition to his technical expertise, Filipi has a background in UX and information architecture, integrating user-centered design approaches into system development and, more recently, in ontology design.


Compétences

Metadata Semantic Web Ontologies Knowledge Graphs FAIR Data Principles Agriculture Biodiversity

Publications

Publications

O design gráfico como ferramenta para a sustentabilidade: uma experiência do projeto pomar urbano.

Rubens Rangel Silva , Filipi Miranda Soares
Anais do XV Congresso Brasileiro de Pesquisa e Desenvolvimento em Design - P&D Design, Oct 2024, online, France. ⟨10.29327/5457226.1-226⟩
Communication dans un congrès hal-05138237 v1

Desdobramentos da Implementação da Rede GO FAIR Agro Brasil no Biênio 2021-2023

Debora Pignatari Drucker , Sérgio Manuel Serra Da Cruz , Milena Ambrosio Telles , Ana Paula Lüdtke Ferreira , Fernando Elias Corrêa et al.
Congresso Brasileiro de Agroinformática, Nov 2023, Brasil, France. pp.286-293, ⟨10.5753/sbiagro.2023.26570⟩
Communication dans un congrès hal-05138281 v1

Unveiling Knowledge Organization Systems’ Artifacts for Digital Agriculture with Lexical Network Analysis

Filipi Miranda Soares , Ivan Bergier , Maria Carolina Coradini , Ana Paula Lüdtke Ferreira , Milena Ambrosio Telles et al.
ER 2023 Workshops, CMLS, CMOMM4FAIR, EmpER, JUSMOD, OntoCom, QUAMES, and SmartFood, Nov 2022, Lisbon, Portugal. pp.299-311, ⟨10.1007/978-3-031-47112-4_28⟩
Communication dans un congrès hal-05138294 v1

Governança de dados na agricultura digital: relato da experiência do C4AI

Cássia Mendes , Fernando Correa , Debora Drucker , Filipi Soares , Antônio Saraiva et al.
Congresso Brasileiro de Agroinformática, Nov 2023, Brasil, France. pp.198-205, ⟨10.5753/sbiagro.2023.26559⟩
Communication dans un congrès hal-05138284 v1

FIT Count Brasil: aplicativo para monitoramento de polinizadores

Sheina Koffler , Filipi Miranda Soares , Natália Pirani Ghilardi Lopes , Bruno Carvalho Albertini , Debora Pignatari Drucker et al.
II Workshop da Rede Brasileira de Ciência Cidadã, Jul 2022, Online, France. ⟨10.29327/175207.1-1⟩
Communication dans un congrès hal-05138298 v1

O protocolo FIT Count como ferramenta de ensino e aprendizagem da polinização

Filipi Miranda Soares , Sheina Koffler , Patrícia Nunes-Silva , Natália Pirani Ghilardi-Lopes
Anais do Simpósio Brasileiro de Polinização, Oct 2022, Sesc Garanhuns - UFAPE, France. ⟨10.29327/1286549.1-1⟩
Communication dans un congrès hal-05138287 v1

Collectively Working towards Plant-Pollinator Interactions Data Interoperability and Reuse: Lessons Learned from the WorldFAIR Project

Debora Drucker , José Salim , Jorrit Poelen , Filipi Soares
Biodiversity Information Science and Standards, 2024, 8, ⟨10.3897/biss.8.141109⟩
Article dans une revue hal-05128112 v1

Leveraging citizen science for monitoring urban forageable plants

Filipi Miranda Soares , Luís Ferreira Pires , Maria Carolina Garcia , Yamine Bouzembrak , Lidio Coradin et al.
GigaScience, 2024, 13, ⟨10.1093/gigascience/giae007⟩
Article dans une revue hal-05128124 v1

Citizen science data on urban forageable plants: a case study in Brazil

Filipi Miranda Soares , Luís Ferreira Pires , Maria Carolina Garcia , Lidio Coradin , Natalia Pirani Ghilardi-Lopes et al.
Gigabyte, 2024, 2024, pp.1-16. ⟨10.46471/gigabyte.107⟩
Article dans une revue hal-05125327 v1

Optimizing the Monitoring of Urban Fruit-Bearing Flora with Citizen Science: An Overview of the Pomar Urbano Initiative

Filipi Soares , Luís Ferreira Pires , Maria Carolina Garcia , Aline de Carvalho , Sheina Koffler et al.
Biodiversity Information Science and Standards, 2023, 7, ⟨10.3897/biss.7.112009⟩
Article dans une revue hal-05132947 v1

Flower-Insect Timed Counts (FIT Count): Protocol Adaptation and Preliminary Results in Brazil

Filipi Soares , Sheina Koffler , Natalia Ghilardi-Lopes , Claire Carvell , James Chiazzese et al.
Biodiversity Information Science and Standards, 2023, 7, ⟨10.3897/biss.7.111545⟩
Article dans une revue hal-05132935 v1

Segurança alimentar: reflexões sobre um problema complexo

Semíramis Martins Álvares Domene , Kayna Agostini , Gabriel Natale Pinto De Almeida , Rafaella Guimarães Moraes Camargo , Aline Martins De Carvalho et al.
Estudos Avançados, 2023, 37 (109), pp.181-206. ⟨10.1590/s0103-4014.2023.37109.012⟩
Article dans une revue hal-05136129 v1

Data standardization of plant–pollinator interactions

José Salim , Antonio Saraiva , Paula Zermoglio , Kayna Agostini , Marina Wolowski et al.
GigaScience, 2022, 11, ⟨10.1093/gigascience/giac043⟩
Article dans une revue hal-05136185 v1

Plant-pollinator Interaction Data: A case study of the WorldFAIR project

Debora Drucker , José Augusto Salim , Maarten Trekels , Quentin Groom , Cynthia Parr et al.
Biodiversity Information Science and Standards, 2022, 6, ⟨10.3897/biss.6.94310⟩
Article dans une revue hal-05138195 v1

The application of the content analysis method in information science: a preliminary study in the context of UFMG's theses and dissertations

Filipi Miranda Soares , Raíssa Yuri Hamanaka , Tereza Cristina Fernandes Pontes , Webert Júnio Araújo , Benildes Coura Moreira dos Santos Maculan
Revista Ibero-Americana de Ciência da Informação, 2022, 15 (2), pp.327-350. ⟨10.26512/rici.v15.n2.2022.36060⟩
Article dans une revue hal-05136137 v1

Plant-pollinator Vocabulary - a Contribution to Interaction Data Standardization

José Augusto Salim , Paula Zermoglio , Debora Drucker , Filipi Soares , Antonio Saraiva et al.
Biodiversity Information Science and Standards, 2021, 5, ⟨10.3897/biss.5.75636⟩
Article dans une revue hal-05138206 v1

Methodological principles to create a metadata extension to the Darwin Core standard for agrobiodiversity data

Filipi Miranda Soares , Benildes Coura Moreira dos Santos Maculan , Debora Pignatari Drucker , Antonio Mauro Saraiva
Brazilian Journal of Information Science: research trends, 2020, 14 (4), pp.e020015. ⟨10.36311/1940-1640.2020.v14n4.10865⟩
Article dans une revue hal-05138217 v1

Linking Agrobiodiversity Data through Metadata Standards

Filipi Soares , Antonio Saraiva , Debora Drucker
Biodiversity Information Science and Standards, 2020, 4, ⟨10.3897/biss.4.58928⟩
Article dans une revue hal-05138212 v1

A relação entre o mapeamento de processos e a modelização no contexto da gestão do conhecimento: estudo de caso aplicado em uma biblioteca digital

Raíssa Yuri Hamanaka , Filipi Miranda Soares
Investigación Bibliotecológica: archivonomía, bibliotecología e información, 2019, 33 (81), pp.223. ⟨10.22201/iibi.24488321xe.2019.81.57997⟩
Article dans une revue hal-05138226 v1

Darwin Core for Agricultural Biodiversity: A metadata extension proposal

Filipi Soares , Benildes Maculan , Debora Drucker
Biodiversity Information Science and Standards, 2019, 3, ⟨10.3897/biss.3.37053⟩
Article dans une revue hal-05138230 v1

2021 Planetary Health Annual Meeting and Festival

Sheina Koffler , Andre Luis Acosta , Filipi Miranda Soares , Antonio Mauro Saraiva
2021 Planetary Health Annual Meeting, Apr 2021, Sao Paulo, Brazil. Zenodo, 203 p., 2022, 978-65-87773-26-1. ⟨10.5281/ZENODO.6373367⟩
Proceedings/Recueil des communications hal-05138307 v1

Fruit-bearing plant species observations in Brazilian cities

Filipi Miranda Soares , Luís Ferreira Pires , Maria Carolina Garcia , Lídio Coradin , Natália Pirani Ghilardi-Lopes et al.
Dataset 10.5281/zenodo.8273049

Taxonomic list of Brazilian fruit-bearing plants for human use

Filipi Miranda Soares , Lídio Coradin , Ana Carolina da Silva Lima , Maria Clara Peres de Carvalho , Benildes Coura Moreira dos Santos Maculan
Dataset 10.5281/zenodo.7970509

Taxonomic list of Brazilian fruit-bearing plants for human use

Filipi Miranda Soares , Lídio Coradin , Ana Carolina da Silva Lima , Maria Clara Peres de Carvalho , Benildes Coura Moreira dos Santos Maculan
Dataset 10.5281/zenodo.10212850

Provenance of WorldFAIR pilot data from: VisitationData_Luisa_Carvalheiro. https://docs.google.com/spreadsheets/d/1cJ0qX9ppqHoSyqFykwYJef-DFOzoutthBXjwKRY81T8 hash://md5/048875415b7cc9fb27f1189a8a946ff5 hash://sha256/dec6efdd95fd64d5c38480e0db0dfa329c94e8e0fc0736f0769cafb470fd13ce

Luísa G. Carvalheiro , Filipi Miranda Soares , José Augusto Salim , Jorrit H. Poelen , Débora Pignatari Drucker
Dataset 10.5281/zenodo.10530108

Provenance of WorldFAIR pilot data from: VisitationData_Luisa_Carvalheiro. https://docs.google.com/spreadsheets/d/1cJ0qX9ppqHoSyqFykwYJef-DFOzoutthBXjwKRY81T8 hash://md5/048875415b7cc9fb27f1189a8a946ff5 hash://sha256/dec6efdd95fd64d5c38480e0db0dfa329c94e8e0fc0736f0769cafb470fd13ce

Luísa G. Carvalheiro , Filipi Miranda Soares , José Augusto Salim , Jorrit H. Poelen , Débora Pignatari Drucker
Dataset 10.5281/zenodo.10530109

Fruit-bearing plant species observations in Brazilian cities

Filipi Miranda Soares , Luís Ferreira Pires , Maria Carolina Garcia , Lídio Coradin , Natália Pirani Ghilardi-Lopes et al.
Dataset 10.5281/zenodo.8186466

Taxonomic list of Brazilian fruit-bearing plant species: native and introduced

Filipi Miranda Soares , Lídio Coradin , Maria Clara Peres , Ana Carolina da Silva Lima , Karoline Reis de Almeida et al.
Dataset 10.5281/zenodo.8273010

Taxonomic list of Brazilian fruit-bearing plant species: native and introduced

Filipi Miranda Soares , Lídio Coradin , Maria Clara Peres , Karoline Reis de Almeida , Stephanie Gabriele Mendonça de França et al.
Dataset 10.5281/zenodo.7970510

Taxonomic list of Brazilian fruit-bearing plant species for human use

Lídio Coradin , Filipi Miranda Soares , Maria Clara Peres , Ana Carolina da Silva Lima , Benildes Coura Moreira dos Santos Maculan
Dataset 10.5281/zenodo.10012849

Taxonomic list of Brazilian fruit-bearing plant species: native and introduced

Filipi Miranda Soares , Lídio Coradin , Maria Clara Peres , Ana Carolina da Silva Lima , Karoline Reis de Almeida et al.
Dataset 10.5281/zenodo.8189370

Some bird observation data

Filipi Miranda Soares
Dataset 10.5281/zenodo.4059749

Some bird observation data

Filipi Miranda Soares
Dataset 10.5281/zenodo.4059750