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François ALLAL

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Researcher identifiers
  • IdHAL francois-allal
  • ResearcherId : Q-8075-2018
  • ORCID 0000-0002-8232-904X
  • Google Scholar : https://scholar.google.fr/citations?user=G_KltjcAAAAJ&hl=fr
  • IdRef : 14083320X
  • ResearcherId : http://www.researcherid.com/rid/Q-8075-2018

Presentation

Chargé de recherche à l’Ifremer en génétique et génomique aquacole depuis 2013, jeparticipe à l’ambition de participer de relever le défi de l’amélioration de la durabilité de la pisciculture grâce notamment à la sélection génomique. Une grande part de mes travaux de recherche concerne l’intégration des outils de la génomique moléculaire et de la génomique quantitative pour l’amélioration des caractères de durabilité tels que la résistance aux maladies, l’efficacité alimentaire, les rendements productifs, ou les interactions génotype x environnement, mais aussi le déterminisme du sexe, ou les traits de personnalité chez le bar européen (*Dicentrarchus labrax*).

Publications

Potential for genomic selection on feed efficiency in gilthead sea bream (Sparus aurata), based on individual feed conversion ratio, carcass and lipid traits

Mathieu Besson , Nicky Rombout , Germain Salou , Alain Vergnet , Sophie Cariou et al.
Aquaculture Reports, 2022, 24, ⟨10.1016/j.aqrep.2022.101132⟩
Journal articles hal-03679214v1
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Parental selection for growth and early-life low stocking density increase the female-to-male ratio in European sea bass

Benjamin Geffroy , Manuel Gesto , Frédéric Clota , Johan Aerts , Maria J. Darias et al.
Scientific Reports, 2021, 11 (1), ⟨10.1038/s41598-021-93116-9⟩
Journal articles hal-03360565v1
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Different survival of three populations of European sea bass (Dicentrarchus labrax) following challenge with two variants of nervous necrosis virus (NNV)

Sofie Barsøe , François Allal , Alain Vergnet , Marc Vandeputte , Niels Jørgen Olesen et al.
Aquaculture Reports, 2021, 19, pp.100621. ⟨10.1016/j.aqrep.2021.100621⟩
Journal articles hal-03150815v1
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Optimization of Genomic Selection to Improve Disease Resistance in Two Marine Fishes, the European Sea Bass (Dicentrarchus labrax) and the Gilthead Sea Bream (Sparus aurata)

Ronan Griot , François Allal , Florence Phocas , Sophie Brard-Fudulea , Romain Morvezen et al.
Frontiers in Genetics, 2021, 12, ⟨10.3389/fgene.2021.665920⟩
Journal articles hal-03360561v1
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Case report of osteomyelitis of the mandible in osteopetrosis and management considerations

Sarah Allal , Valentin Rabuel , Charline Gengler , Catherine Douchet , Francois Allal et al.
International Journal of Surgery Case Reports, 2021, 81, pp.105813. ⟨10.1016/j.ijscr.2021.105813⟩
Journal articles hal-03404273v1
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Development and testing of a combined species SNP array for the European seabass (Dicentrarchus labrax) and gilthead seabream (Sparus aurata)

C. Peñaloza , T. Manousaki , R. Franch , A. Tsakogiannis , A. K. Sonesson et al.
Genomics, 2021, 113 (4), pp.2096--2107. ⟨10.1016/j.ygeno.2021.04.038⟩
Journal articles hal-03415631v1
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Current status and potential of genomic selection to improve selective breeding in the main aquaculture species of International Council for the Exploration of the Sea (ICES) member countries

Pierre Boudry , François Allal , Muhammad L. Aslam , Luca Bargelloni , Tim P. Bean et al.
Aquaculture Reports, 2021, 20, pp.100700. ⟨10.1016/j.aqrep.2021.100700⟩
Journal articles hal-03411084v1
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An investigation of links between metabolic rate and feed efficiency in European sea bass Dicentrarchus labrax

Charles Rodde , Hugues de Verdal , Marc Vandeputte , François Allal , Julie Nati et al.
Journal of Animal Science, 2021, 99 (6), pp.1-9. ⟨10.1093/jas/skab152⟩
Journal articles hal-03360566v1
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Sex dimorphism in European sea bass (Dicentrarchus labrax L.): New insights into sex-related growth patterns during very early life stages

Sara Faggion , Marc Vandeputte , Alain Vergnet , Frédéric Clota , Marie-Odile Blanc et al.
PLoS ONE, 2021, 16 (4), pp.e0239791. ⟨10.1371/journal.pone.0239791⟩
Journal articles hal-03206637v1

Unraveling the genotype by environment interaction in a thermosensitive fish with a polygenic sex determination system

Benjamin Geffroy , Mathieu Besson , Núria Sánchez-Baizán , Frederic Clota , Alexander Goikoetxea et al.
Proceedings of the National Academy of Sciences of the United States of America, 2021, 118 (50), pp.e2112660118. ⟨10.1073/pnas.2112660118⟩
Journal articles hal-03485506v1
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Genome-wide association studies for resistance to viral nervous necrosis in three populations of European sea bass (Dicentrarchus labrax) using a novel 57k SNP array DlabChip

Ronan Griot , François Allal , Florence Phocas , Sophie Brard-Fudulea , Romain Morvezen et al.
Aquaculture, 2021, 530, pp.735930. ⟨10.1016/j.aquaculture.2020.735930⟩
Journal articles hal-03544239v1
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Variations in isotope incorporation rates and trophic discrimination factors of carbon and nitrogen stable isotopes in scales from three European sea bass (Dicentrarchus labrax) populations

Charles Rodde , Hugues de Verdal , Sébastien Lefebvre , Christophe Menniti , Marc Vandeputte et al.
Journal of Experimental Marine Biology and Ecology, 2020, 533, pp.151468. ⟨10.1016/j.jembe.2020.151468⟩
Journal articles hal-03097301v1
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Contribution of a bioenergetics model to investigate the growth and survival of European seabass in the Bay of Biscay - English Channel area

Chloe Dambrine , Martin Huret , Mathieu Woillez , Laure Pecquerie , Francois Allal et al.
Ecological Modelling, 2020, 423, pp.109007. ⟨10.1016/j.ecolmodel.2020.109007⟩
Journal articles hal-02921206v1
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The contribution of ancient admixture to reproductive isolation between European sea bass lineages

Maud Duranton , François Allal , Sophie Valière , Olivier Bouchez , François Bonhomme et al.
Evolution Letters, 2020, 4 (3), pp.226-242. ⟨10.1002/evl3.169⟩
Journal articles hal-03065745v1
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How to genetically increase fillet yield in fish: Relevant genetic parameters and methods to predict genetic gain

Marc Vandeputte , Clémence Fraslin , Pierrick Haffray , Anastasia Bestin , François Allal et al.
Aquaculture, 2020, 519, pp.734877. ⟨10.1016/j.aquaculture.2019.734877⟩
Journal articles hal-03150887v1
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Population, Temperature and Feeding Rate Effects on Individual Feed Efficiency in European Sea Bass (Dicentrarchus labrax)

Charles Rodde , Marc Vandeputte , François Allal , Mathieu Besson , Frédéric Clota et al.
Frontiers in Marine Science, 2020, 7, ⟨10.3389/fmars.2020.578976⟩
Journal articles hal-03150873v1
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Evaluation of a European sea bass (Dicentrarchus labrax L.) post-larval tagging method with ultra-small RFID tags

Sara Faggion , Pierre Sanchez , Marc Vandeputte , Frédéric Clota , Alain Vergnet et al.
Aquaculture, 2020, 520, pp.734945. ⟨10.1016/j.aquaculture.2020.734945⟩
Journal articles hal-03150884v1
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Combining Individual Phenotypes of Feed Intake With Genomic Data to Improve Feed Efficiency in Sea Bass

Mathieu Besson , François Allal , Béatrice Chatain , Alain Vergnet , Frédéric Clota et al.
Frontiers in Genetics, 2019, 10, pp.1-14. ⟨10.3389/fgene.2019.00219⟩
Journal articles hal-02403255v1

APIS: An auto-adaptive parentage inference software that tolerates missing parents

Ronan Griot , Francois Allal , Sophie Brard-Fudulea , Romain Morvezen , Pierrick Haffray et al.
Molecular Ecology Resources, 2019, pp.1-12. ⟨10.1111/1755-0998.13103⟩
Journal articles hal-02434174v1
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First evidence of realized selection response on fillet yield in Rainbow trout Oncorhynchus mykiss, Using Sib selection or based on correlated ultrasound measurements

Marc Vandeputte , Jérôme Bugeon , Anastasia Bestin , Alexandre Desgranges , Jean-Michel Allamellou et al.
Frontiers in Genetics, 2019, 10, pp.1-13. ⟨10.3389/fgene.2019.01225⟩
Journal articles hal-02627462v1

The European sea bass: a key marine fish model in the wild and in aquaculture

Marc Vandeputte , P.-A. Gagnaire , F. Allal
Animal Genetics, 2019, 50 (3), pp.195-206. ⟨10.1111/age.12779⟩
Journal articles hal-02395941v1

Population-specific variations of the genetic architecture of sex determination in wild European sea bass Dicentrarchus labrax L.

Sara Faggion , Marc Vandeputte , Béatrice Chatain , Pierre-Alexandre Gagnaire , François Allal et al.
Heredity, 2019, 122 (5), pp.612-621. ⟨10.1038/s41437-018-0157-z⟩
Journal articles hal-02395931v1

Dynamic epimarks in sex-related genes predict gonad phenotype in the European sea bass, a fish with mixed genetic and environmental sex determination

Dafni Anastasiadi , Marc Vandeputte , Nuria Sanchez-Baizan , Francois Allal , Francesc Piferrer et al.
Epigenetics, 2018, 13 (9), pp.988-1011. ⟨10.1080/15592294.2018.1529504⟩
Journal articles hal-01994184v1
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The origin and remolding of genomic islands of differentiation in the European sea bass

Maud Duranton , François Allal , Christelle Fraïsse , Nicolas Bierne , François Bonhomme et al.
Nature Communications, 2018, 9 (1), ⟨10.1038/s41467-018-04963-6⟩
Journal articles hal-01825457v1
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Genome-wide association and genomic prediction of resistance to viral nervous necrosis in European sea bass (Dicentrarchus labrax) using RAD sequencing

Christos Palaiokostas , Sophie Cariou , Anastasia Bestin , Jean-Sebastien Bruant , Pierrick Haffray et al.
Genetics Selection Evolution, 2018, 50 (1), pp.1-11. ⟨10.1186/s12711-018-0401-2⟩
Journal articles hal-01826622v1

Investigation of morphological predictors of fillet and carcass yield in European sea bass (Dicentrarchus labrax) for application in selective breeding

Marc Vandeputte , Antonio Puledda , Anne Sophie Tyran , Anastasia Bestin , Céline Coulombet et al.
Aquaculture, 2017, 470, pp.40-49. ⟨10.1016/j.aquaculture.2016.12.014⟩
Journal articles hal-01595276v1

Does early growth play a role in the sex determination of european SEABASS Dicentrarchus labrax?

Marc Vandeputte , Khaled Horri , François Allal , Sebastien Ferrari , Marie-Odile Vidal et al.
Aquaculture, 2017, 472, pp.114
Journal articles hal-01929920v1

Estimates of genetic variability and inbreeding in experimentally selected populations of European sea bass

J.E.J. Hillen , I. Coscia , Marc Vandeputte , K. Herten , B. Hellemans et al.
Aquaculture, 2017, 479, pp.742-749. ⟨10.1016/j.aquaculture.2017.07.012⟩
Journal articles hal-01583182v1

Improving feed efficiency in fish using selective breeding: a review

Hugues de Verdal , Hans Komen , Edwige Quillet , Béatrice Chatain , François Allal et al.
Reviews in Aquaculture, 2017, 10 (4), pp.1-19. ⟨10.1111/raq.12202⟩
Journal articles hal-01602277v1
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Viral encephalopathy and retinopathy in aquaculture: a review

Q.K. Doan , Marc Vandeputte , B. Chatain , T. Morin , F. Allal et al.
Journal of Fish Diseases, 2017, 40 (5), pp.717-742. ⟨10.1111/jfd.12541⟩
Journal articles hal-01533903v1

How could fully scaled carps appear in natural waters in Madagascar?

Jean-Noël Hubert , François Allal , Caroline Hervet , Monique Ravakarivelo , Zsigmond Jeney et al.
Proceedings of the Royal Society B: Biological Sciences, 2016, 283 (1837), pp.1-8. ⟨10.1098/rspb.2016.0945⟩
Journal articles hal-01924181v1
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Heritability of boldness and hypoxia avoidance in European seabass, Dicentrarchus labrax

Sebastien Ferrari , Khaled Horri , François Allal , Alain Vergnet , David Benhaim et al.
PLoS ONE, 2016, 11 (12), pp.1-16. ⟨10.1371/journal.pone.0168506⟩
Journal articles hal-01602254v1

Past climate changes explain the phylogeography of Vitellaria paradoxa over Africa

François Allal , H. Sanou , L. Millet , A. Vaillant , L. Camus-Kulandaivelu et al.
Heredity, 2011, 107 (2), pp.174-186. ⟨10.1038/hdy.2011.112⟩
Journal articles hal-02642275v1

Réduction du coût de la sélection génomique par utilisation de panels à plus faible densité de marqueurs chez le bar et la daurade

Jonathan D’ambrosio , Mathieu Besson , Anastasia Bestin , Jean-Sébastien Bruant , Aline Bajek et al.
7. Journées de la Recherche Piscicole, Jul 2022, Paris, France
Conference papers anses-03889117v1

Germ stem cell grafting in european sea bass: a practical approach

Alain Vergnet , Marc Vandeputte , Jean-Jacques Lareyre , François Allal
Aquaculture Europe 2022, Sep 2022, Rimini, Italy
Conference papers hal-03911893v1

Late high temperature promotes fast growth and female differentiation in European sea bass Dicentrarchus labrax, while early photoperiod has no effect on either trait

Frédéric Clota , Benjamin Geffroy , Alain Vergnet , Marie-Odile Blanc , Stéphane Lallement et al.
Aquaculture Europe 2021, Oct 2021, Funchal, Portugal
Conference papers hal-03360551v1

Genetic correlations between processing traits and individual feed efficiency in a gilthead sea bream (Sparus aurata) commercial line

Anastasia Bestin , Mathieu Besson , Alain Vergnet , François Allal , Frédéric Clota et al.
Aquaculture Europe 2021, Oct 2021, Funchal, Portugal
Conference papers hal-03360548v1

Genome wide association studies revealed one strong effect QTLfor viral nervous necrosis resistance in European sea bass (Dicentrarchus labrax)

Ronan Griot , François Allal , Florence Phocas , Sophie Brard-Fudulea , Romain Morvezen et al.
Aquaculture Europe 2020, Apr 2021, Cork, Ireland
Conference papers hal-03198222v1

Genomically assisted reconstruction of the ancestral Dicentrarchus labrax L. Mediterranean lineage

Sara Faggion , Duranton Maud , Pierre-Alexandre Gagnaire , Marc Vandeputte , François Allal et al.
Aquaculture Europe 2021, Oct 2021, Funchal, Portugal
Conference papers hal-03360557v1

Sex dimorphism in European sea bass (Dicentrarchus labrax L.) : new insights into sex-related growth patterns during very early life stages

Sara Faggion , Marc Vandeputte , Alain Vergnet , Frédéric Clota , Marie‐odile Blanc et al.
Aquaculture Europe 2020 online, Apr 2021, Cork, Ireland
Conference papers hal-03187478v1

Phenotypic and genomic correlations between feed efficiency and metabolic traits in European sea bass

Mathieu Besson , David J Mckenzie , Julie J.H Nati , Salou Germain , Alain Vergnet et al.
Aquaculture Europe 2021, Oct 2021, Funchal, Portugal
Conference papers hal-03360559v1

Genomic prediction and genotype-by-temperature interaction of sex tendency in European sea bass.

François Allal , Mathieu Besson , Bastien Sadoul , François Ruelle , Pegart Mako et al.
Aquaculture Europe 2021, Oct 2021, Funchal, Portugal
Conference papers hal-03360554v1

Multigenerational epigenetic inheritance of masculinizing temperatures in the European sea bass

Nuria Sanchez-Baizan , Marc Vandeputte , François Allal , Francesc Piferrer
6th International Symposium Genomics in Aquaculture, Sep 2020, Granada, Spain
Conference papers hal-03187504v1

Genomically assisted reconstruction of the ancestral Dicentrarchus labrax Mediterranean lineage

Sara Faggion , Maud Duranton , Pierre-Alexandre Gagnaire , Marc Vandeputte , François Allal et al.
6th International Symposium Genomics in Aquaculture, Sep 2020, Granada, Spain
Conference papers hal-03187502v1

Réponse à la sélection sur le rendement de filet chez la truite arc-en-ciel

Marc Vandeputte , Jérôme Bugeon , Anastasia Bestin , Alexandre Desgranges , Jean-Michel Allamelou et al.
6. Journées de la Recherche Filière Piscicole, Institut Technique de l'Aviculture et des Elevages de Petits Animaux (ITAVI). FRA., Jul 2019, Paris, France
Conference papers hal-02734410v1

Successful realized selection response for fillet yield in rainbow trout Oncorhynchus mykiss

Marc Vandeputte , Jérôme Bugeon , Anastasia Bestin , Alexandre Desgranges , Sébastien Courant et al.
World Aquaculture 2018, European Aquaculture Society (EAS)., Aug 2019, Montpellier, France
Conference papers hal-02264916v1

Améliorer l'efficacité alimentaire des poissons en utilisant une nouvelle méthode de phénotypage en aquarium individuel

Mathieu Besson , François Allal , Alain Vergnet , Frédéric Clota , Sophie Cariou et al.
6. Journées de la Recherche Filière Piscicole, Institut Technique de l'Aviculture et des Elevages de Petits Animaux (ITAVI). FRA., Jul 2019, Paris, France
Conference papers hal-02264927v1

Accounting for genetic variability in fitness-related traits using a Dynamic Energy Budget model, an example on European Seabass

Mathieu Besson , Marc Vandeputte , François Allal , Patrick Prunet , Marie-Laure Bégout et al.
6. International Symposium and Thematic School on ‘Dynamic energy Budget theory for metabolic organization’ (DEB2019), Apr 2019, Brest, France. pp.47
Conference papers hal-03187437v1

Epigenetic inheritance and integration of masculinizing temperatures of the European sea bass (Dicentrarchus labrax)

Nuria Sanchez-Baizan , Dafni Anastasiadi , Marc Vandeputte , François Allal , Francesc Piferrer et al.
Epigenetic inheritance Symposium, Aug 2019, Zurich, Switzerland
Conference papers hal-03187444v1

How to genetically increase fillet yield in fish: relevant genetic parameters and methods for the estimation of genetic gain

Marc Vandeputte , Clémence Fraslin , Pierrick Haffray , Anastasia Bestin , François Allal et al.
Aquaculture Europe 2019, Oct 2019, Berlin, Germany
Conference papers hal-03187446v1

Intégration de caractères de résistance à cinq pathologies dans les schémas de sélection commerciale de truite, bar et daurade

Anastasia Bestin , Yoannah François , Thierry Morin , Mathilde Dupont-Nivet , Marc Vandeputte et al.
6. Journées de la Recherche Filière Piscicole, Institut Technique de l'Aviculture et des Elevages de Petits Animaux (ITAVI). FRA., Jul 2019, Paris, France
Conference papers hal-02264929v1

Interaction génotype x aliment: que sait-on, où va-t-on ?

Marc Vandeputte , Pierrick Haffray , Anastasia Bestin , François Allal , Mathilde Dupont-Nivet et al.
Journée du SFAM, Mar 2019, Montpellier, France
Conference papers hal-03187439v1

Estimation of genetic parameters of feed conversion ratio based on individual phenotypes in sea bass

Mathieu Besson , François Allal , Béatrice Chatain , Alain Vergnet , Frédéric Clota et al.
11th World Congress on Genetics Applied to Livestock Production, Feb 2018, Auckland, New Zealand
Conference papers hal-03156802v1

Selective breeding on tolerance to fasting improves feed conversion ratio of sea bass

Mathieu Besson , François Allal , Béatrice Chatain , Alain Vergnet , Frédéric Clota et al.
AQUA 2018, Aug 2018, Montpellier, France
Conference papers hal-03187434v1

Population-specific variations of the genetic architecture of sex determination in wild European sea bass Dicentrarchus labrax L.

Sara Faggion , Marc Vandeputte , Béatrice Chatain , Pierre-Alexandre Gagnaire , François Allal et al.
AQUA 2018, Aug 2018, Montpellier, France
Conference papers hal-03187154v1

Breeding for disease resistance in farmed fish in the era of high-throughput sequencing

Christos Palaiokostas , Martin Kocour , Tomáš Veselý , Sophie Cariou , Anastasia Bestin et al.
11th World Congress on Genetics Applied to Livestock Production, Feb 2018, Auckland, New Zealand
Conference papers hal-03156780v1

Genome-wide association study and genomic evaluations for resistance to Viral Nervous Necrosis in wild populations of European seabass Dicentrarchus labrax

François Allal , Quoc Khanh Doan , Béatrice Chatain , Alain Vergnet , Pierrick Haffray et al.
AQUA 2018, Aug 2018, Montpellier, France
Conference papers hal-03187164v1

Des puces pour prédire l’avenir…

François Allal , Ronan Griot , Pierre-Alexandre Gagnaire , Romain Morvezen , Sophie Brard et al.
Journées du SFAM (Syndicat Français de l'Aquaculture Marine et Nouvelle), Mar 2018, Montpelllier, France
Conference papers hal-03156824v1
Image document

A first demonstration of realized selection response for fillet yield in fish, in rainbow trout oncorhynchus mykiss

Marc Vandeputte , Jérôme Bugeon , Anastasia Bestin , Alexandre Desgranges , Sebastien Courant et al.
13. International Symposium for Genetics in Aquaculture (ISGA XIII), Jul 2018, Cairns, Australia
Conference papers hal-02264933v1

Heritabilities of resistance to VNN and vibriosis and genetic correlations with production traits and processing yields in two selected commercial lines of the European sea bass Dicentrarchus labrax

Romain Morvezen , Anastasia Bestin , Anne-Sophie Tiriau , Laurane Pallandre , Joelle Cabon et al.
13th International Symposium Genetics in Aquaculture, Jul 2018, Cairns, Australia
Conference papers hal-03187102v1

Genetic improvement of feed conversion ratio in sea bass : new approach based on individual phenotypes and genomic info

Mathieu Besson , François Allal , Béatrice Chatain , Alain Vergnet , Frédéric Clota et al.
Genetics and Breeding in Aquaculture: North meets South, May 2018, Bergen, Norway
Conference papers hal-03156894v1

Genetic parameters of resistance to gastroenteritis (rtge) and rainbow trout fry syndrome (rtfs) in rainbow trout oncorhynchus mykiss and their genetic correlations with production traits

Pierrick Haffray , Anastasia Bestin , Florian Enez , Sébastien Courant , Daniel Guemene et al.
World Aquaculture 2018, Aug 2018, Montpellier, France
Conference papers hal-02738108v1

APIS: A new auto-adaptive parentage inference software tolerant to missing parents

Ronan Griot , François Allal , Sophie Brard-Fudulea , Sophie S. Cariou , Pierrick Haffray et al.
13th International Symposium Genetics in Aquaculture, Jul 2018, Cairns, Australia
Conference papers hal-03187121v1

Sélection du bar pour l’efficacité alimentaire: on y arrive

Mathieu Besson , Francois Allal , Béatrice Chatain , Alain Vergnet , Frédéric Clota et al.
Journée du SFAM, Mar 2018, Montpellier, France
Conference papers hal-03156814v1

Sélectionner sur l’efficacité alimentaire : une nouvelle approche chez le bar

Mathieu Besson , François Allal , Béatrice Chatain , Alain Vergnet , Frédéric Clota et al.
Journées Techniques du Sysaaf, Dec 2017, Rennes, France
Conference papers hal-03156749v1

Heritability of boldness and hypoxia avoidance in European seabass, Dicentrarchus labrax

François Allal , Sebastien Ferrari , Khaled Horri , Alain Vergnet , David Benhaïm et al.
Aquaculture Europe 2017, Oct 2017, Dubrovnik, Croatia
Conference papers hal-03156670v1

La sélection génomique chez les poissons marins, pour quoi faire ?

François Allal , Pierrick Haffray , Marc Vandeputte
Journée du SFAMN (Syndicat Français de l'Aquaculture Marine et Nouvelle), Mar 2017, Montpellier, France
Conference papers hal-03155373v1

GENESEA : développement de la sélection génomique chez le bar et la daurade

François Allal , Ronan Griot , Pierre-Alexandre Gagnaire , Christophe C. Klopp , Aline Bajek et al.
Journées Techniques du Sysaaf, Dec 2017, Rennes, France
Conference papers hal-03156734v1

Genetic variation of resistance to Viral Nervous Necrosis and genetic correlations with production traits in wild populations of the European sea bass (Dicentrarchus labrax)

Quoc Khanh Doan , Marc Vandeputte , Béatrice Chatain , Pierrick Haffray , Alain Vergnet et al.
Aquaculture Europe 2017, Oct 2017, Dubrovnik, Croatia
Conference papers hal-03156682v1

Genetic variation of resistance to Viral Nervous Necrosis in wild populations of the European sea bass (Dicentrarchus labrax)

François Allal , Quoc Khanh Doan , Béatrice Chatain , Pierrick Haffray , Alain Vergnet et al.
XVI Congreso nacional de Aquaculture, Oct 2017, Zaragoza, Spain. ⟨10.1016/j.aquaculture.2017.05.011⟩
Conference papers hal-03155395v1

Efficacité d’une sélection pour la résistance au jeûne

François Allal , Marc Vandeputte , Alain Vergnet , Frédéric Clota , Mathieu Besson et al.
Journées Techniques du Sysaaf, Dec 2017, Rennes, France
Conference papers hal-03156744v1

Implementing successful aquaculture breeding programs: the keys to success in France

Marc Vandeputte , François Allal , Mathilde Dupont-Nivet , Pierrick Haffray
XVI congreso nacional de acuicultura - Journée Franco Espagnole, Oct 2017, Saragosse, Spain
Conference papers hal-02734602v1
Image document

Peut-on sélectionner sur le rendement de filet chez les poissons ? (et chez le bar en particulier)

Marc Vandeputte , Clémence Fraslin , Jérôme Bugeon , François Allal , Antonio Puledda et al.
Journée du SFAMN (Syndicat Français de l'Aquaculture Marine et Nouvelle), Mar 2017, Montpellier, France
Conference papers hal-03155369v1

Héritabilité de la résistance à la nécrose nerveuse virale de populations sauvages de Bar/Loup (Dicentrarchus labrax)

François Allal , Quoc Khanh Doan , Béatrice Chatain , Alain Vergnet , Gilles Breuil et al.
Journées techniques du Sysaaf, Dec 2017, Rennes, France
Conference papers hal-03156758v1

Genetic parameters of indirect predictors of gutted and fillet yields in the gilthead sea bream Sparus aurata in using 2D camera, 3D digitizer and ultrasound technologies

Pierrick Haffray , Dofungo Ouatarra , Sophie Cariou , Jean-Sébastien Bruant , Frederic Ventre et al.
Aquaculture Europe 2016, Sep 2016, Edinburgh, United Kingdom. 1146 p
Conference papers hal-02741462v1

Résistance à la nodavirose des populations naturelles de bar

François Allal , Khanh Doan Q. , Alain Vergnet , Béatrice Chatain , Gilles Breuil et al.
5e journées de la Recherche Filière piscicole, Jul 2016, paris, France
Conference papers hal-02795243v1

Investigation of genetic resistance to Viral Nervous Necrosis in European sea bass (Dicentrarchus labrax) using RAD sequencing

Christos Palaiokostas , Sophie Cariou , Anastasia Bestin , Jean-Sébastien Bruant , Pierrick Haffray et al.
Aquaculture Europe 2016, Sep 2016, Edinburgh, United Kingdom
Conference papers hal-03155244v1

Résistance au nodavirus chez le bar sauvage

François Allal , Quoc Khanh Doan , Béatrice Chatain , Alain Vergnet , Marc Vandeputte et al.
Journée du SFAM (Syndicat Français de l'Aquaculture Marine et Nouvelle), Mar 2016, La Grande Motte, France
Conference papers hal-02796959v1

Efficacité alimentaire individuelle chez le bar

Sebastien Ferrari , Alain Vergnet , François Allal , Frédéric Clota , Béatrice Chatain et al.
Journée Technique Piscicole du Sysaaf, Feb 2016, Paris, France
Conference papers hal-02798942v1

Utilisation d'imagerie et d'ultrasons pour l'amélioration du rendement en chair par sélection génétique de la daurade

Dofungo Ouatarra , Anastasia Bestin , Pierrick Haffray , Florian Enez , Sophie Cariou et al.
5. Journées de la Recherche Filière Piscicole, Institut Technique de l'Aviculture et des Elevages de Petits Animaux (ITAVI). FRA., Jul 2016, Paris, France. pp.30
Conference papers hal-02741919v1

Prédicteurs morphologiques du rendement chez le bar: projet BAR3

Marc Vandeputte , Antonio Puledda , Anne Sophie Tyran , Anastasia Bestin , Céline Coulombet et al.
Journée Technique Piscicole du Sysaaf, Feb 2016, Paris, France
Conference papers hal-02800398v1

Résistance génétique à l'entérite chez la truite ? Interaction avec la flavobactériose et les caractères de production

Anne-Sophie Tyran , Alexandre Desgranges , Anastasia Bestin , Florian Enez , François Allal et al.
5. Journées de la Recherche Filière Piscicole, Institut Technique de l'Aviculture et des Elevages de Petits Animaux (ITAVI). FRA., Jul 2016, Paris, France
Conference papers hal-02743196v1

La personnalité du bar… un caractère héritable

François Allal , Sébastien Ferrari , Khaled Horri , Béatrice Chatain , Marc Vandeputte et al.
Journée du SFAM (Syndicat Français de l'Aquaculture Marine et Nouvelle), Mar 2015, La Grande Motte, France
Conference papers hal-01535337v1
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Does early growth play a role in the sex determination of european seabass dicentrarchus labrax?

Marc Vandeputte , K. Horri , F. Allal , S. Ferrari S , M. -O Vidal et al.
12th International Symposium on Genetics in Aquaculture (ISGA), Jun 2015, Santiago de Compostela, Spain. pp.1
Conference papers hal-02735070v1
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Combining VITASSIGN and COLONY : an efficient practical procedure for parental assignment with missing parents

Quoc Khanh Doan , Marc Vandeputte , Béatrice Chatain , Alain Vergnet , François Allal et al.
ISGA XII, Jun 2015, Santiago de Compostela, Spain
Conference papers hal-01535335v1

The phenotypic and genetic links between early individual growth and sex determination in European sea bass

Marc Vandeputte , Khaled Horri , François Allal , Sebastien Ferrari , Marie-Odile Vidal et al.
Aquaculture Europe 2015, Oct 2015, Rotterdam, Netherlands
Conference papers hal-01536551v1
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Heritability of coping styles in farmed European sea bass

François Allal , Sebastien Ferrari , Khaled Horri , Marie-Odile Vidal , François Ruelle et al.
12. International Symposium on Genetics in Aquaculture, Jun 2015, Santiago de Compostela, Spain. pp.1
Conference papers hal-02736002v1

Combining VITASSIGN and COLONY for pedigree reconstruction in a case of factorial mating with missing parental genotypes

François Allal , Q.K. Doan , Béatrice Chatain , Alain Vergnet , Marc Vandeputte et al.
Aquaculture 2015: Cutting edge science in Aquaculture, Aug 2015, Montpellier, France
Conference papers hal-01535334v1

Selective breeding for resistance to Viral Nervous Necrosis disease: prospective procedure for sustainable development in aquaculture

Khanh Doan Q. , Marc Vandeputte , Béatrice Chatain , Thierry Morin , François Allal et al.
Sustainable Fisheries Development Workshop, Nov 2015, Taiwan
Conference papers hal-02795348v1

Combining VITASSIGN and COLONY for pedigree reconstruction in a case of factorial mating with missing parental genotypes

François Allal , Quoc Khanh Doan , Beatrice Chatain , Alain Vergnet , Marc Vandeputte et al.
Aquaculture Europe 2015, Oct 2015, Rotterdam, Netherlands
Conference papers hal-01535332v1

Phenotypic characterization of the three main natural populations of seabass (Dicentrarchus labrax) on growth and quality traits performances

Alain Vergnet , Frédéric Clota , Edoh Denis , François Ruelle , Marie-Odile Blanc et al.
Aquaculture Europe 2021, Oct 2021, Funchal, Portugal.
Conference poster hal-03360553v1

Individual feed intake and body weight gain relationship according to genetic origin and rearing temperature in European sea bass Dicentrarchus labrax

Charles Rodde , Marc Vandeputte , François Allal , Mathieu Besson , Alain Vergnet et al.
Aquaculture Europe 2019, Oct 2019, Berlin, Germany.
Conference poster hal-03187449v1

Aquakultor: le premier jeu de simulation en aquaculture

François Allal , Mathieu Besson , - Tomagamestudio
6. Journées de la Recherche Filière Piscicole, Jul 2019, Paris, France. 2019
Conference poster hal-02735109v1

Development and characterization of a 57K Single Nucleotide Polymorphism array for European sea bass

François Allal , Maud Duranton , Romain Morvezen , Sophie Brard-Fudulea , Charles Poncet et al.
AQUA 2018, Aug 2018, Montpellier, France
Conference poster hal-03187160v1

Accurate genomic prediction of phenotypic sex within European sea bass families : a unique tool to understand and control sex ratio variations in a species with polygenic sex determination

Marc Vandeputte , François Allal , Dafni Anastasiadi , Alexandre Vasilescu , Benjamin Geffroy et al.
AQUA 2018, Aug 2018, Montpellier, France.
Conference poster hal-03187169v1
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Selective breeding to reduce the ecological footprint of aquaculture

Marc Vandeputte , Mathieu Besson , François Allal , Florence Phocas , Edwige Quillet et al.
Aquaculture Europe 2017, Oct 2017, Dubrovnik, Croatia.
Conference poster hal-03156701v1
Image document

A medium-throughput method to phenotype fish for individual feed efficiency

Mathieu Besson , François Allal , Béatrice Chatain , Alain Vergnet , Frédéric Clota et al.
Aquaculture Europe 2017, Oct 2017, Dubrovnik, Croatia.
Conference poster hal-03155407v1

Sexe et croissance précoce chez le bar : des liens très étroits

Marc Vandeputte , Khaled Horri , François Allal , Sebastien Ferrari , Marie-Odile Vidal et al.
5. Journées de la Recherche Filière Piscicole, Jul 2016, Paris, France. 2016
Conference poster hal-02795242v1

Mesurer l’efficacité alimentaire individuelle chez le bar ?

Sebastien Ferrari , Alain Vergnet , Frédéric Clota , Béatrice Chatain , François Allal et al.
5emes Journées Recherche Filière Piscicole, Jul 2016, Paris, France.
Conference poster hal-03154832v1

Genomic Selection in AquacultureAquaculture Species

François Allal , Nguyen Hong Nguyen
Ahmadi; Nourollah and Bartholomé; Jérôme. Complex Trait Prediction: Methods and Protocols, Springer US, pp.469--491, 2022, Methods in Molecular Biology, 978-1-07-162205-6. ⟨10.1007/978-1-0716-2205-6_17⟩
Book sections hal-03679217v1