François Pompanon

31
Documents

Publications

Publications

Image document

Imprints of domestication in the sheep genome

Charlotte Her , François Pompanon
Georges PELLETIER. Genetics of Domestications, ISTE Editions, pp.21-40, 2024, 9781789491678
Chapitre d'ouvrage hal-04808209 v1

Multiplicité des symbioses : du parasitisme au mutualisme

Wafa Achouak , Philippe Bertin , Pierre Capy , Didier Debroas , Franck Dedeine et al.
L’empreinte du Vivant, Le Cherche Midi, pp.191, 2015, 978-2-7491-4383-5
Chapitre d'ouvrage hal-02389481 v1

Mike Bruford (1963–2023)

Pablo Orozco-Terwengel , Eric Coissac , Olivier Hanotte , Francois Pompanon , Paul Sunnucks et al.
Molecular Ecology, 2023, 32 (19), pp.5448-5449. ⟨10.1111/mec.17133⟩
Article dans une revue hal-04867262 v1
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VarGoats project: a dataset of 1159 whole-genome sequences to dissect Capra hircus global diversity

Laure Denoyelle , Estelle Talouarn , Philippe Bardou , Licia Colli , Adriana Alberti et al.
Genetics Selection Evolution, 2021, 53 (1), 14 p. ⟨10.1186/s12711-021-00659-6⟩
Article dans une revue hal-03480970 v1
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Search for Selection Signatures Related to Trypanosomosis Tolerance in African Goats

Bruno Serranito , Dominique Taurisson-Mouret , Sahraoui Harkat , Abbas Laoun , Nadjet-Amina Ouchene-Khelifi et al.
Frontiers in Genetics, 2021, 12, ⟨10.3389/fgene.2021.715732⟩
Article dans une revue hal-04804805 v1
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Local adaptations of Mediterranean sheep and goats through an integrative approach

Bruno Serranito , Marco Cavalazzi , Pablo Vidal , Dominique Taurisson-Mouret , Elena Ciani et al.
Scientific Reports, 2021, 11, pp.21363. ⟨10.1038/s41598-021-00682-z⟩
Article dans une revue hal-03421679 v1
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Genomic Uniqueness of Local Sheep Breeds From Morocco

Abdessamad Ouhrouch , Simon Boitard , Frédéric Boyer , Bertrand Servin , Anne da Silva et al.
Frontiers in Genetics, 2021, 12, pp.723599. ⟨10.3389/fgene.2021.723599⟩
Article dans une revue hal-03591256 v1

Local adaptations of Mediterranean sheep and goats through an integrative approach

Éric Rouvellac , Serranito Bruno , Marco Cavalazzi , Pablo Vidal , Dominique Taurisson-Mouret et al.
Scientific Reports, 2021, 11 (21363 (2021)), https://doi.org/10.1038/s41598-021-00682-z
Article dans une revue hal-04973085 v1
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Altitudinal Zonation of Green Algae Biodiversity in the French Alps

Adeline Stewart , Delphine Rioux , Fréderic Boyer , Ludovic Gielly , François Pompanon et al.
Frontiers in Plant Science, 2021, 12, pp.679428. ⟨10.3389/fpls.2021.679428⟩
Article dans une revue hal-03258608 v1
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EvoSheep : The Makeup of Sheep Breeds in the Ancient Near East

Emmanuelle Vila , Philippe Abrahami , Moussab Albesso , Agraw Amane , Camille Bader et al.
Antiquity, 2021, 95 (379), pp.e2, 1-8. ⟨10.15184/aqy.2020.247⟩
Article dans une revue hal-03402639 v1
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An evaluation of sequencing coverage and genotyping strategies to assess neutral and adaptive diversity

Badr Benjelloun , Frédéric Boyer , Ian Streeter , Wahid Zamani , Stefan Engelen et al.
Molecular Ecology Resources, 2019, 19 (6), pp.1497-1515. ⟨10.1111/1755-0998.13070⟩
Article dans une revue cea-04307622 v1
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Genetic homogenization of indigenous sheep breeds in Northwest Africa

Ibrahim Belabdi , Abdessamad Ouhrouch , Mohamed Lafri , Semir Bechir Suheil Gaouar , Elena Ciani et al.
Scientific Reports, 2019, 9, pp.7920. ⟨10.1038/s41598-019-44137-y⟩
Article dans une revue hal-04808191 v1
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Old origin of a protective endogenous retrovirus (enJSRV) in the Ovis genus

Tristan Cumer , François Pompanon , Frédéric Boyer
Heredity, 2019, 122 (2), ⟨10.1038/s41437-018-0112-z⟩
Article dans une revue hal-04809547 v1
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An evaluation of sequencing coverage and genotyping strategies to assess neutral and adaptive diversity

Badr Benjelloun , Frédéric Boyer , Ian Streeter , Wahid Zamani , Stefan Engelen et al.
Molecular Ecology Resources, 2019, 19 (6), pp.1497-1515. ⟨10.1111/1755-0998.13070⟩
Article dans une revue hal-04805165 v1
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Ancient goat genomes reveal mosaic domestication in the Fertile Crescent

Kevin P Daly , Pierpaolo Maisano Delser , Victoria Mullin , Amelie Scheu , Valeria Mattiangeli et al.
Science, 2018, 361 (6397), pp.85-88. ⟨10.1126/science.aas9411⟩
Article dans une revue hal-02188464 v1
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Convergent genomic signatures of domestication in sheep and goats

Florian Alberto , Frédéric Boyer , Pablo Orozco-Terwengel , Ian Streeter , Bertrand Servin et al.
Nature Communications, 2018, 9 (1), pp.813. ⟨10.1038/s41467-018-03206-y⟩
Article dans une revue cea-01875703 v1
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Characterizing neutral genomic diversity and selection signatures in indigenous populations of Moroccan goats (Capra hircus) using WGS data

Badr Benjelloun , Florian F. Alberto , Ian Streeter , Frédéric Boyer , Eric Coissac et al.
Frontiers in Genetics, 2015, 6, ⟨10.3389/fgene.2015.00107⟩
Article dans une revue hal-01964918 v1
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Prey Preference of Snow Leopard (Panthera uncia) in South Gobi, Mongolia

Wasim Shehzad , Thomas Michael Mccarthy , François Pompanon , Lkhagvajav Purevjav , Eric Coissac et al.
PLoS ONE, 2012, 7 (2), pp.e32104. ⟨10.1371/journal.pone.0032104⟩
Article dans une revue hal-04804823 v1

ecoPrimers: inference of new DNA barcode markers from whole genome sequence analysis.

Tiayyba Riaz , Wasim Shehzad , Alain Viari , François Pompanon , Pierre Taberlet et al.
Nucleic Acids Research, 2011, 39 (21), pp.e145. ⟨10.1093/nar/gkr732⟩
Article dans une revue hal-00746852 v1
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Persistence of Environmental DNA in Freshwater Ecosystems

Tony Dejean , Alice Valentini , Antoine Duparc , Stéphanie Pellier-Cuit , François Pompanon et al.
PLoS ONE, 2011, 6 (8), pp.e23398. ⟨10.1371/journal.pone.0023398⟩
Article dans une revue hal-04804837 v1
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An In silico approach for the evaluation of DNA barcodes

Gentile Ficetola , Eric Coissac , Stéphanie Zundel , Tiayyba Riaz , Wasim Shehzad et al.
BMC Genomics, 2010, 11 (1), pp.434. ⟨10.1186/1471-2164-11-434⟩
Article dans une revue hal-04809600 v1
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Y-chromosomal haplotypes in domestic and wild goats reveal ancient paternal bottlenecks and recent introgressions

J.A. Lenstra , Vargoats Consortium , I.J. Nijman , B.D. Rosen , Philippe Bardou et al.
ISGC and IGGC Virtual Meeting, Jun 2021, Toulouse-Dunedin, France. pp.886-889, ⟨10.3920/978-90-8686-940-4_208⟩
Communication dans un congrès hal-03817722 v1

Towards a sustainable management of farm animal genetic diversity in the era of whole-genome data: The case of sheep and goats

François Pompanon , Badr Benjelloun
37th International Society for Animal Genetics Conference, International Society for Animal Genetics, Jul 2019, Lleida, Spain
Communication dans un congrès hal-04985662 v1

Epigenetic factors to face environmental variations in small ruminants

Laure Denoyelle , Pierre de Villemereuil , Frédéric Boyer , Meidhi Khelifi , Clément Gaffé et al.
37th International Society for Animal Genetics Conference, International Society for Animal Genetics, Jul 2019, Lleida, Spain
Communication dans un congrès hal-04985675 v1

Caractérisation du régime alimentaire des ruminants à partir de l'analyse des produits de la digestion par DNA metabarcoding

Vincent Niderkorn , René Baumont , Anne Farruggia , Remy Delagarde , Jean-Louis Peyraud et al.
5. Journées d'Animation Scientifique du département Phase (JAS Phase 2013), Institut National de Recherche Agronomique (INRA). UAR Département Physiologie Animale et Systèmes d'Elevage (0558)., Oct 2013, Paris, France. 17 diapositives
Communication dans un congrès hal-01210453 v1

The individual-level approach: an original genetic field sampling scheme to optimize barrier detection in patchy populations

Jérôme Prunier , Serge Fenet , François Pompanon , Pierre Joly , Bernard Kaufmann et al.
IENE 2012, international conference on ecology and transportation, Oct 2012, Postdam-Berlin, Germany
Communication dans un congrès hal-01353154 v1
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Présentation et premiers résultats du programme 1000 génomes caprins : VarGoats

Philippe Bardou , Céline Bourdon , Laure Denoyelle , Thomas Faraut , Estelle Talouarn et al.
Journées Scientifiques du Département de Génétique Animale, Oct 2018, Dienné, France
Poster de conférence hal-03817570 v1

Chronology of selective events during sheep domestication

Charlotte Her , François Pompanon
International Conference on Ecological Sciences, Oct 2018, Rennes, France
Poster de conférence hal-04985705 v1