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Evolutionary history and association with seaweeds shape the genomes and metabolisms of marine bacteria
Catherine A. Pfister
,
Johanna Berlinghof
,
Maximiliana Bogan
,
Ulisse Cardini
,
Angelique Gobet
et al.
Article dans une revue
hal-05195842v1
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Year-round quantification, structure and dynamics of epibacterial communities from diverse macroalgae reveal a persistent core microbiota and strong host specificities
Maéva Brunet
,
Nolwen Le Duff
,
Tristan Barbeyron
,
François Thomas
Article dans une revue
hal-04785077v2
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Unveiling the role of novel carbohydrate‐binding modules in laminarin interaction of multimodular proteins from marine Bacteroidota during phytoplankton blooms
Marie-Katherin Zühlke
,
Elizabeth Ficko-Blean
,
Daniel Bartosik
,
Nicolas Terrapon
,
Alexandra Jeudy
et al.
Article dans une revue
hal-04579759v1
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A review on the chemical ecology of the Fucaceae holobionts: from fundamental knowledge to applications
Coralie Rousseau
,
Gautier Demoulinger
,
Sylvie Rousvoal
,
Delphine Champeval
,
Maurane Dolly
et al.
Article dans une revue
hal-04740350v1
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Seasonal dynamics of a glycan‐degrading flavobacterial genus in a tidally mixed coastal temperate habitat
Maéva Brunet
,
Nolwen Le Duff
,
Fabienne Rigaut-Jalabert
,
Sarah Romac
,
Tristan Barbeyron
et al.
Article dans une revue
hal-04260403v1
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Unique alcohol dehydrogenases involved in algal sugar utilization by marine bacteria
Stefan Brott
,
Ki Hyun Nam
,
François Thomas
,
Theresa Dutschei
,
Lukas Reisky
et al.
Article dans une revue
hal-04234624v1
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Zobellia alginiliquefaciens sp. nov., a novel member of the flavobacteria isolated from the epibiota of the brown alga Ericaria zosteroides (C. Agardh) Molinari & Guiry 2020
Tristan Barbeyron
,
Nolwen Le Duff
,
Eric Duchaud
,
François Thomas
Article dans une revue
hal-04199452v1
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Connecting Algal Polysaccharide Degradation to Formaldehyde Detoxification
Stefan Brott
,
François Thomas
,
Maike Behrens
,
Karen Methling
,
Daniel Bartosik
et al.
Article dans une revue
hal-03822270v1
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Consuming fresh macroalgae induces specific catabolic pathways, stress reactions and Type IX secretion in marine flavobacterial pioneer degraders
Maéva Brunet
,
Nolwen Le Duff
,
Tristan Barbeyron
,
François Thomas
Article dans une revue
hal-03774104v1
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Structure-function analysis of a new PL17 oligoalginate lyase from the marine bacterium Zobellia galactanivorans Dsij T
Diane Jouanneau
,
Leesa J Klau
,
Robert Larocque
,
Agathe Jaffrennou
,
Ghislain Duval
et al.
Article dans une revue
hal-03357278v1
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Functional Characterization of a L-2-Haloacid Dehalogenase From Zobellia galactanivorans DsijT Suggests a Role in Haloacetic Acid Catabolism and a Wide Distribution in Marine Environments
Eugénie Grigorian
,
Agnès Groisillier
,
François Thomas
,
Catherine Leblanc
,
Ludovic Delage
Article dans une revue
hal-03357342v1
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Isotopic tracing reveals single-cell assimilation of a macroalgal polysaccharide by a few marine Flavobacteria and Gammaproteobacteria
François Thomas
,
Nolwen Le Duff
,
Ting-Di Wu
,
Aurélie Cébron
,
Stéphane Uroz
et al.
Article dans une revue
hal-03220808v1
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Accumulation of detached kelp biomass in a subtidal temperate coastal ecosystem induces succession of epiphytic and sediment bacterial communities
Maéva Brunet
,
Florian de Bettignies
,
Nolwen Le Duff
,
Gwenn Tanguy
,
Dominique Davoult
et al.
Article dans une revue
hal-03146433v1
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Zobellia roscoffensis sp. nov. and Zobellia nedashkovskayae sp. nov., two flavobacteria from the epiphytic microbiota of the brown alga Ascophyllum nodosum, and emended description of the genus Zobellia
Tristan Barbeyron
,
Manon Thiébaud
,
Nolwen Le Duff
,
Marjolaine Martin
,
Erwan Corre
et al.
Article dans une revue
hal-03357314v1
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Specific detection and quantification of the marine flavobacterial genus Zobellia on macroalgae using novel qPCR and CARD-FISH assays
Maéva Brunet
,
Nolwen Le Duff
,
Bernhard M Fuchs
,
Rudolf Amann
,
Tristan Barbeyron
et al.
Article dans une revue
hal-03417302v1
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Regulation of alginate catabolism involves a GntR family repressor in the marine flavobacterium Zobellia galactanivorans DsijT
Magda Dudek
,
Anissa Dieudonné
,
Diane Jouanneau
,
Tatiana Rochat
,
Gurvan Michel
et al.
Article dans une revue
hal-02938399v1
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Degradation dynamics and processes associated with the accumulation of Laminaria hyperborea (Phaeophyceae) kelp fragments: an in situ experimental approach
Florian de Bettignies
,
Patrick Dauby
,
François Thomas
,
Angélique Gobet
,
Ludovic Delage
et al.
Article dans une revue
hal-03035135v1
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Short-term effect of simulated salt marsh restoration by sand-amendment on sediment bacterial communities
François Thomas
,
James T. Morris
,
Cathleen Wigand
,
Stefan M. Sievert
Article dans une revue
hal-02147188v1
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Evaluation of a new primer combination to minimize plastid contamination in 16S rDNA metabarcoding analyses of alga‐associated bacterial communities
François Thomas
,
Simon Dittami
,
Maéva Brunet
,
Nolwen Le Duff
,
Gwenn Tanguy
et al.
Article dans une revue
hal-02404303v1
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Stable isotope probing and metagenomics highlight the effect of plants on uncultured phenanthrene-degrading bacterial consortium in polluted soil
François Thomas
,
Erwan Corre
,
Aurélie Cebron
Article dans une revue
hal-02322773v1
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Primary productivity below the seafloor at deep-sea hot springs
Jesse Mcnichol
,
Hryhoriy Stryhanyuk
,
Sean Sylva
,
François Thomas
,
Niculina Musat
et al.
Proceedings of the National Academy of Sciences of the United States of America, 2018, 115 (26), pp.6756-6761. ⟨10.1073/pnas.1804351115⟩
Article dans une revue
hal-02322725v1
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How do deep-sea hot spring ecosystems work?
Stefan Sievert
,
Jesse Mcnichol
,
François Thomas
Science Journal for Kids, 2018, pp.1-5
Article dans une revue
hal-02404329v1
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Gene Expression Analysis of Zobellia galactanivorans during the Degradation of Algal Polysaccharides Reveals both Substrate-Specific and Shared Transcriptome-Wide Responses
François Thomas
,
Philippe Bordron
,
Damien Eveillard
,
Gurvan Michel
Article dans une revue
hal-01613034v1
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Rhizosphere effect is stronger than PAH concentration on shaping spatial bacterial assemblages along centimetre-scale depth gradients
Amélia Bourceret
,
Corinne Leyval
,
François Thomas
,
Aurélie Cebron
Article dans une revue
hal-01930946v1
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Carrageenan catabolism is encoded by a complex regulon in marine heterotrophic bacteria
Elizabeth Ficko-Blean
,
Aurelie Prechoux
,
François Thomas
,
Tatiana Rochat
,
Robert Larocque
et al.
Article dans une revue
hal-01899178v1
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Genetic analyses unravel the crucial role of a horizontally acquired alginate lyase for brown algal biomass degradation by Z obellia galactanivorans
Yongtao Zhu
,
François Thomas
,
Robert Larocque
,
Nan Li
,
Delphine Duffieux
et al.
Article dans une revue
hal-01503166v1
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Herbivore-induced chemical and molecular responses of the kelps Laminaria digitata and Lessonia spicata
Andrés A Ritter
,
Léa Cabioch
,
Loraine A Brillet-Guéguen
,
Erwan A Corre
,
Audrey A Cosse
et al.
Article dans une revue
hal-01587420v1
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Habitat and taxon as driving forces of carbohydrate catabolism in marine heterotrophic bacteria: example of the model algae-associated bacterium Zobellia galactanivorans Dsij T
Tristan Barbeyron
,
François Thomas
,
Valérie Barbe
,
Hanno Teeling
,
Chantal Schenowitz
et al.
Environmental Microbiology, 2016, Ecology and Physiology of Marine Microbes, 18 (12), pp.4610-4627. ⟨10.1111/1462-2920.13584⟩
Article dans une revue
hal-02137896v1
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Short-Term Rhizosphere Effect on Available Carbon Sources, Phenanthrene Degradation, and Active Microbiome in an Aged-Contaminated Industrial Soil
François Thomas
,
Aurélie Cebron
Article dans une revue
hal-01780413v1
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Isolation and substrate screening of polycyclic aromatic hydrocarbon degrading bacteria from soil with long history of contamination
François Thomas
,
Catherine Lorgeoux
,
Pierre Faure
,
David Billet
,
Aurélie Cebron
Article dans une revue
istex
hal-01780009v1
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Kelps feature systemic defense responses: insights into the evolution of innate immunity in multicellular eukaryotes.
François Thomas
,
Audrey Cosse
,
Sophie Le Panse
,
Bernard Kloareg
,
Philippe Potin
et al.
New Phytologist, 2014, 204 (3), pp.567-76
Article dans une revue
hal-01113853v1
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Rhizosphere heterogeneity shapes abundance and activity of sulfur-oxidizing bacteria in vegetated salt marsh sediments
François Thomas
,
Anne Giblin
,
Zoe Cardon
,
Stefan Sievert
Article dans une revue
hal-01777382v1
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Comparative characterization of two marine alginate lyases from Zobellia galactanivorans reveals distinct modes of action and exquisite adaptation to their natural substrate.
François Thomas
,
Lena C E Lundqvist
,
Murielle Jam
,
Alexandra Jeudy
,
Tristan Barbeyron
et al.
Article dans une revue
hal-00998611v1
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Biochemical and Structural Characterization of the Complex Agarolytic Enzyme System from the Marine Bacterium Zobellia galactanivorans
Jan-Hendrik Hehemann
,
Gaëlle Correc
,
François Thomas
,
Thomas Thomas
,
Tristan Barbeyron
et al.
Article dans une revue
hal-02108464v1
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Waterborne signaling primes the expression of elicitor-induced genes and buffers the oxidative responses in the brown alga Laminaria digitata.
François Thomas
,
Audrey Cosse
,
Sophie Goulitquer
,
Stefan Raimund
,
Pascal Morin
et al.
Article dans une revue
hal-00925488v1
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Environmental and gut bacteroidetes: the food connection
François Thomas
,
Jan-Hendrik Hehemann
,
Etienne Rebuffet
,
Mirjam Czjzek
,
Gurvan Michel
Article dans une revue
hal-00925466v1
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