Guillaume Devailly

71
Documents
Affiliation actuelle
  • Génétique Physiologie et Systèmes d'Elevage (GenPhySE)

Publications

Publications

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Transgenerational epigenetics in quail: targeting DNA methylation patterns to address the interplay between genetic and epigenetic mechanisms

Stacy Rousse , Chloé Cerutti , Sophie Leroux , Paul Terzian , Joanna Lledo et al.
Ecology and Evolution, Oct 2024, Lyon, France
Poster de conférence hal-04770637 v1
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Transgenerational response to endocrine disruptor : phenotypic, genotypic and epigenotypic analyses in quail

Stacy Rousse , Sophie Leroux , David Gourichon , Ludovic Calandreau , Chloé Cerutti et al.
Environmental and Agronomical Genomics Symposium, Feb 2024, Toulouse, France. , pp.128, 2024, Book of abstracts
Poster de conférence hal-04474289 v1
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Climate, heat-stress, and genetics impact whole-blood gene expression levels in crossbred pigs

Arthur Durante , Guillaume Devailly , Katia Feve , Yann Labrune , Laure Gress et al.
Environmental and Agronomical Genomics Symposium, Feb 2024, Toulouse, France
Poster de conférence hal-04479834 v1
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Transgenerational epigenetics in quail: whole genome DNA methylation analysis

Chloé Cerutti , Sophie Leroux , Paul Terzian , Joanna Lledo , David Gourichon et al.
Epigenetic Inheritance: Impact for Biology and Society, Aug 2023, Zurich, Switzerland
Poster de conférence hal-04212971 v1

Investigating the molecular responses of chicken embryos to their mothers heat stress using DNA methylation

Keyvan Karami , Jules Sabban , Chloé Cerutti , Guillaume Devailly , Sylvain Foissac et al.
Epigenetic inheritance symposium, Aug 2023, Zurich, Switzerland. 2023
Poster de conférence hal-04571102 v1
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PANORAMA : PArticipative desigN to enhance OutdooR Access of farM Animals

Valérie Fillon , Mélanie Gunia , Guillaume Devailly , Christelle Knudsen , Davi Savietto et al.
Journées Scientifiques du département GA, Sep 2022, Bordeaux, France
Poster de conférence hal-03810107 v1
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Transgenerational epigenetics in quail

Chloé Cerutti , Sophie Leroux , Paul Terzian , Joanna Lledo , David Gourichon et al.
ECCB2022 - 21st European Conference on Computational Biology, Sep 2022, Sitges, Spain
Poster de conférence hal-03935584 v1
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Effets transgénérationnels d'une exposition embryonnaire à la chaleur sur le transcriptome et l'épigénome de la caille japonaise

Anais Vitorino Carvalho , Benoît Piégu , Christelle Hennequet-Antier , Nathalie Couroussé , Sabine Crochet et al.
épiPhase - 7. Journées d'Animation Scientifique autour de l'Epigénétique, Jun 2022, Rennes, France
Poster de conférence hal-03726346 v1
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Transcriptomic and DNA methylation response to feed intake in the duodenum in high- and low- feed efficiency pig lines

Guillaume Devailly , Katia Fêve , Safia Saci , Julien Sarry , Sophie Valière et al.
15th International Symposium on Digestive Physiology of Pigs DPP, May 2022, Rotterdam, Netherlands. , 2022, Science for Sustainable Nutrition Proceedings of the 15th International Symposium on Digestive Physiology of Pigs (DPP2022). ⟨10.1016/j.anscip.2022.03.419⟩
Poster de conférence hal-03682865 v1
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VizFaDa: Visualisations of FAANG data

Laura Morel , Peter Harrison , Guillaume Devailly
FAANG workshop 2022, Feb 2022, On Line, United States.
Poster de conférence hal-03740359 v1
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VizFaDa: Visualisations of FAANG data

Guillaume Devailly , Laura Morel , Peter W Harrison
JOBIM 2021, Oct 2021, Paris, France.
Poster de conférence hal-03401235 v1
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VizFaDa: Visualisations of FAANG data

Laura Morel , Peter W Harrison , Guillaume Devailly
VIZBI 2021, Mar 2021, Inconnu, Germany
Poster de conférence hal-03181510 v1
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Divergent selection for feed efficiency in pigs altered the duodenum transcriptomic response to feed intake and its DNA methylation profiles

Guillaume Devailly , Katia Feve , Safia Saci , Julien Sarry , Sophie Valière et al.
Physiological Genomics, 2024, ⟨10.1152/physiolgenomics.00123.2023⟩
Article dans une revue hal-04528954 v1
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Epigenetics, genes and the environment: what importance for breeding practices and selection methods in poultry?

Vincent Coustham , Charlotte Andrieux , Chloé Cerutti , Anne Collin , Ingrid David et al.
INRAE Productions Animales, 2023, 36 (4), pp.7384. ⟨10.20870/productions-animales.2023.36.4.7384⟩
Article dans une revue hal-04356432 v1
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Disruption of the primocolonizing microbiota alters epithelial homeostasis and imprints stem cells in the colon of neonatal piglets

Martin Beaumont , Corinne Lencina , Katia Fève , Céline Barilly , Laurence Le-Normand et al.
FASEB Journal, 2023, 37 (10), ⟨10.1096/fj.202301182R⟩
Article dans une revue hal-04214464 v1
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Short communication: Effects of in-ovo injection of endocrine disruptors and methyltransferase inhibitor on quail growth and egg-laying performances

Chloé Cerutti , Sophie Leroux , David Gourichon , Yann Labrune , Ingrid David et al.
Article dans une revue hal-03617287 v1
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The phenotype of the gut region is more stably retained than developmental stage in piglet intestinal organoids

Eloïse Mussard , Corinne Lencina , Lise Gallo , Céline Barilly , Maryse Poli et al.
Frontiers in Cell and Developmental Biology, 2022, 10, 14 p. ⟨10.3389/fcell.2022.983031⟩
Article dans une revue hal-03788364 v1
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Comprehensive analysis of epigenetic signatures of human transcription control

Guillaume Devailly , Anagha Joshi
Molecular Omics, 2021, 17 (5), pp.692-705. ⟨10.1039/d0mo00130a⟩
Article dans une revue hal-03529599 v1

Transcript Analysis Reveals a Hypoxic Inflammatory Environment in Human Chronic Otitis Media With Effusion

Mahmood Bhutta , Jane Lambie , Lindsey Hobson , Debbie Williams , Hayley Tyrer et al.
Frontiers in Genetics, 2020, 10, Non paginé. ⟨10.3389/fgene.2019.01327⟩
Article dans une revue hal-02640449 v1
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Dynamics of promoter bivalency and RNAP II pausing in mouse stem and differentiated cells

Anna Mantsoki , Guillaume Devailly , Anagha Joshi
BMC Developmental Biology, 2018, 18, Non paginé. ⟨10.1186/s12861-018-0163-7⟩
Article dans une revue hal-01731145 v1
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Causal gene regulatory network inference using enhancer activity as a causal anchor

Deepti Vipin , Lingfei Wang , Guillaume Devailly , Tom Michoel , Anagha Joshi
Bioinformatics, 2018, Pré-Print (11), ⟨10.3390/ijms19113609⟩
Article dans une revue hal-01867041 v1
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Insights into mammalian transcription control by systematic analysis of ChIP sequencing data

Guillaume Devailly , Anagha Joshi
BMC Bioinformatics, 2018, 19 (Suppl 14), pp.409. ⟨10.1186/s12859-018-2377-x⟩
Article dans une revue hal-01939976 v1

Delineating biological and technical variance in single cell expression data

Guillaume Devailly , Anna Mantsoki , Anagha Joshi
International Journal of Biochemistry and Cell Biology, 2017, 90, pp.161-166. ⟨10.1016/j.biocel.2017.07.006⟩
Article dans une revue hal-01869889 v1
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Meta-analysis of Liver and Heart Transcriptomic Data for Functional Annotation Transfer in Mammalian Orthologs

Pía Francesca Loren Reyes , Tom Michoel , Anagha Joshi , Guillaume Devailly
Computational and Structural Biotechnology Journal, 2017, 15, pp.425-432. ⟨10.1016/j.csbj.2017.08.002⟩
Article dans une revue hal-01869862 v1

Meta-analysis of Liver and Heart Transcriptomic Data for Functional Annotation Transfer in Mammalian Orthologs

Pía Francesca Loren Reyes , Tom Michoel , Anagha Joshi , Guillaume Devailly
Computational and Structural Biotechnology Journal, 2017, 15, pp.425-432. ⟨10.1016/j.csbj.2017.08.002⟩
Article dans une revue hal-02952423 v1

Delineating biological and technical variance in single cell expression data

Ángeles Arzalluz-Luque , Guillaume Devailly , Anna Mantsoki , Anagha Joshi
International Journal of Biochemistry and Cell Biology, 2017, 90, pp.161-166. ⟨10.1016/j.biocel.2017.07.006⟩
Article dans une revue hal-02952413 v1
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DNA methylation signal has a major role in the response of human breast cancer cells to the microenvironment

P Mathot , M Grandin , Guillaume Devailly , Frédérique Souazé , V. Cahais et al.
Oncogenesis, 2017, 6 (10), pp.e390. ⟨10.1038/oncsis.2017.88⟩
Article dans une revue inserm-01668763 v1

Gene expression variability in mammalian embryonic stem cells using single cell RNA-seq data

Anna Mantsoki , Guillaume Devailly , Anagha Joshi
Computational Biology and Chemistry, 2016, 63, pp.52-61. ⟨10.1016/j.compbiolchem.2016.02.004⟩
Article dans une revue hal-02956423 v1
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Inhibition of DNA methylation promotes breast tumor sensitivity to netrin-1 interference

M. Grandin , P. Mathot , Guillaume Devailly , Y. Bidet , Akram Ghantous et al.
EMBO Molecular Medicine, 2016, 8 (8), pp.863-877. ⟨10.15252/emmm.201505945⟩
Article dans une revue hal-01792610 v1

Heat*seq: an interactive web tool for high-throughput sequencing experiment comparison with public data

Guillaume Devailly , Anna Mantsoki , Anagha Joshi
Bioinformatics, 2016, 32 (21), pp.3354-3356. ⟨10.1093/bioinformatics/btw407⟩
Article dans une revue hal-02943260 v1

Inhibition of DNA methylation promotes breast tumor sensitivity to netrin‐1 interference

Mélodie Grandin , Pauline Mathot , Guillaume Devailly , Yannick Bidet , Akram Ghantous et al.
EMBO Molecular Medicine, 2016, 8 (8), pp.863-877. ⟨10.15252/emmm.201505945⟩
Article dans une revue hal-02956419 v1

The PLA2R1-JAK2 pathway upregulates ERRα and its mitochondrial program to exert tumor-suppressive action

A Griveau , Guillaume Devailly , G Devailly , L Eberst , N Navaratnam et al.
Oncogene, 2016, 35 (38), pp.5033-5042. ⟨10.1038/onc.2016.43⟩
Article dans une revue hal-01868807 v1

Gene expression variability in mammalian embryonic stem cells using single cell RNA-seq data

Anna Mantsoki , Guillaume Devailly , Anagha Joshi
Computational Biology and Chemistry, 2016, 63, pp.52-61. ⟨10.1016/j.compbiolchem.2016.02.004⟩
Article dans une revue hal-01868805 v1

Heat*seq: an interactive web tool for high-throughput sequencing experiment comparison with public data

Guillaume Devailly , Anna Mantsoki , Anagha Joshi
Bioinformatics, 2016, 32 (21), pp.3354-3356. ⟨10.1093/bioinformatics/btw407⟩
Article dans une revue hal-01869881 v1
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CpG island erosion, polycomb occupancy and sequence motif enrichment at bivalent promoters in mammalian embryonic stem cells

Anna Mantsoki , Guillaume Devailly , Anagha Joshi
Scientific Reports, 2015, 5, pp.Non Paginé. ⟨10.1038/srep16791⟩
Article dans une revue hal-01867989 v1

CpG island erosion, polycomb occupancy and sequence motif enrichment at bivalent promoters in mammalian embryonic stem cells

Anna Mantsoki , Guillaume Devailly , Anagha Joshi
Scientific Reports, 2015, 5 (1), ⟨10.1038/srep16791⟩
Article dans une revue hal-02956427 v1

Variable reproducibility in genome-scale public data: A case study using ENCODE ChIP sequencing resource

Guillaume Devailly , Anna Mantsoki , Tom Michoel , Anagha Joshi
FEBS Letters, 2015, 589 (24 Pt B), pp.3866-3870. ⟨10.1016/j.febslet.2015.11.027⟩
Article dans une revue hal-01867998 v1
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Dynamics of MBD2 deposition across methylated DNA regions during malignant transformation of human mammary epithelial cells

Guillaume Devailly , Mélodie Grandin , Laury Perriaud , Pauline Mathot , Jean-Guy Delcros et al.
Nucleic Acids Research, 2015, 43 (12), pp.5838-5854. ⟨10.1093/nar/gkv508⟩
Article dans une revue hal-01867978 v1

TIF1 Suppresses Tumor Progression by Regulating Mitotic Checkpoints and Chromosomal Stability

Roxane M Pommier , Johann Gout , David Vincent , Lindsay B Alcaraz , Nicolas Chuvin et al.
Cancer Research, 2015, 75 (20), pp.4335-4350. ⟨10.1158/0008-5472.CAN-14-3426⟩
Article dans une revue hal-01867975 v1
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Repression of PLA2R1 by c-MYC and HIF-2alpha promotes cancer growth

David Vindrieux , Guillaume Devailly , Arnaud Augert , Benjamin Le Calvé , Mylène Ferrand et al.
Oncotarget, 2014, 5 (4), pp.1004-1013. ⟨10.18632/oncotarget.1681⟩
Article dans une revue hal-01867980 v1
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Combining chemotherapeutic agents and netrin-1 interference potentiates cancer cell death

Andrea Paradisi , Marion Creveaux , Benjamin Gibert , Guillaume Devailly , Emeline Redoulez et al.
EMBO Molecular Medicine, 2013, 5 (12), pp.1821-1834. ⟨10.1002/emmm.201302654⟩
Article dans une revue hal-02649747 v1

Étude des réponses moléculaires des embryons de poulet à l'exposition à la chaleur de leur mère

Keyvan Karami , Sophie Leroux , Jules Sabban , C. Cerutti , Guillaume Devailly et al.
15. Journées de la Recherche Avicole et des Palmipèdes à Foie Gras (JRAPFG), Mar 2024, Tours, France. pp.204, ⟨10.1016/j.anscip.2024.06.034⟩
Communication dans un congrès hal-04700042 v1
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Stronger transcriptomic response to feed intake in the duodenum of pig with high feed efficiency from a divergent selection experiment

Guillaume Devailly , Katia Feve , Safia Saci , Julien Sarry , Sophie Valière et al.
International Congress on Animal Science EAAP 2023, Aug 2023, Lyon, France. ⟨10.15454/1.5572415481185847E12⟩
Communication dans un congrès hal-04195417 v1

Feed efficiency correlates with the transcriptomic response to feed intake in the pig duodenum

Guillaume Devailly , Katia Feve , S. Saci , Julien Sarry , Sophie Valière et al.
Book of Abstracts of the 74. Annual Meeting of the European Federation of Animal Science, INRAE, Aug 2023, Lyon, France. pp.232
Communication dans un congrès hal-04197555 v1
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Transgenerational epigenetics in quail

Chloé Cerutti , Sophie Leroux , Paul Terzian , Joanna Lledo , David Gourichon et al.
Genotoul Biostat Bioinfo Day, Dec 2022, Castanet-Tolosan, France
Communication dans un congrès hal-03957296 v1
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Transfection ADN ou ARNm d’organoïdes intestinaux de porc pour une application en édition de l’épigénome

Katia Feve , Tanguy Bourrec , Guillaume Devailly
Organoïdes et recherche agronomique, Jun 2022, Maisons-Alfort, France
Communication dans un congrès hal-03740381 v1
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Visualisation of FAANG data with VizFaDa

Laura Morel , Peter Harrison , Guillaume Devailly
JOBIM 2022, Jul 2022, Rennes, France
Communication dans un congrès hal-03740369 v1

Effet de l'injection in-ovo de perturbateurs endocriniens ou d'un inhibiteur de méthyltransférases sur la croissance et la reproduction des cailles

Chloé Cerutti , Sophie Leroux , David Gourichon , Yann Labrune , Tatiana Zerjal et al.
EpiPHASE 6ème journée d'animation scientifique autour de l'épigénétique, Jun 2021, Lyon, France
Communication dans un congrès hal-03617387 v1
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Fostering data re-use with interactive visualisations of transcriptomics and epigenomics data

Guillaume Devailly
Séminaire MIAT, Feb 2020, Toulouse, France
Communication dans un congrès hal-02956433 v1
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VizFaDa: Towards interactive visualisations of FAANG data

Guillaume Devailly
2. FAANG-Europe Workshop on Functional Annotation of Animal Genomes, FAANG-Europe, Feb 2020, Prague, Czech Republic
Communication dans un congrès hal-03181770 v1
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R user groups and where to find them

Guillaume Devailly
useR! 2019, Jul 2019, Toulouse, France
Communication dans un congrès hal-02289524 v1
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PEREpigenomics Profile Explorer of Roadmap Epigenomics data

Guillaume Devailly
UseR! 2019, Jul 2019, Toulouse, France
Communication dans un congrès hal-02289519 v1
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Epigenetic marks and the human transcript diversity

Guillaume Devailly
Genotoul Biostat Bioinfo Day, Dec 2018, Toulouse, France
Communication dans un congrès hal-01956109 v1
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scFeatureFilter: correlation-based feature filtering for single-cell RNA-seq

Guillaume Devailly
Workshop: Bioinfo/Biostat, Jan 2018, Toulouse, France
Communication dans un congrès hal-01801978 v1
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Heat adaptation in pigs : phenotypes, genotypes & blood transcriptomics in the PigHeaT program

Guillaume Devailly , Yann Labrune , Katia Feve , Laure Gress , Jean-Luc Gourdine et al.
International Conference of System Biology (ICSB), Oct 2018, Lyon, France
Communication dans un congrès hal-01929027 v1
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Impact du climat, du stress thermique, et de la génétique sur le niveau d'expression des gènes des porcs du programme PigHeaT

Guillaume Devailly
Journées Scientifiques du Département Génétique Animale - La Génétique Animale et les Interactions, Oct 2018, Tours, France
Communication dans un congrès hal-01929014 v1
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Valorisations of epigenomic and transcriptomic data

Guillaume Devailly
Animation scientifique d'Unité, Dec 2017, Toulouse, France
Communication dans un congrès hal-01800387 v1