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Newly Identified Mycobacterium africanum Lineage 10, Central Africa
Christophe Guyeux
,
Gaetan Senelle
,
Adrien Le Meur
,
Philip Supply
,
Cyril Gaudin
Article dans une revue
hal-04489082v1
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Comparison of in silico predicted Mycobacterium tuberculosis spoligotypes and lineages from whole genome sequencing data
Taane G Clark
,
Gary Napier
,
David Couvin
,
Guislaine Refrégier
,
Christophe Guyeux
Article dans une revue
hal-04224785v1
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The paradoxes of Mycobacterium tuberculosis molecular evolution and consequences for the inference of tuberculosis emergence date
Rima Zein Eddine
,
F. Hak
,
A. Le Meur
,
C. Genestet
,
O. Dumitrescu
Article dans une revue
hal-04311241v1
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The future of CRISPR in Mycobacterium tuberculosis infection
Rima Zein Eddine
,
Guislaine Refrégier
,
Jorge Cervantes
,
Noemí Kaoru Yokobori
Article dans une revue
hal-04117515v1
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Towards a better understanding of the long-lasting evolutionary history of Mycobacterium tuberculosis
Gaetan Senelle
,
Christophe Guyeux
,
Guislaine Refrégier
,
Christophe Sola
Article dans une revue
hal-04489118v1
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Towards a better understanding of the long-lasting evolutionary history of Mycobacterium tuberculosis
Gaëtan Senelle
,
Christophe Guyeux
,
Guislaine Refrégier
,
Christophe Sola
Tuberculosis, 2023, 143, pp.102374 (4)
Article dans une revue
hal-04456569v1
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Consistency of Mycobacterium tuberculosis Complex Spoligotyping between the Membrane-Based Method and In Silico Approach
Charlotte Genestet
,
Elisabeth Hodille
,
Albin Bernard
,
Maxime Vallée
,
Gérard Lina
Article dans une revue
hal-04245098v1
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Connection between two historical tuberculosis outbreak sites in Japan, Honshu, by a new ancestral Mycobacterium tuberculosis L2 sublineage
Christophe Guyeux
,
Gaetan Senelle
,
Guislaine Refrégier
,
Florence Bretelle-Establet
,
Emmanuelle Cambau
Article dans une revue
hal-03924496v1
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Investigating the Diversity of Tuberculosis Spoligotypes with Dimensionality Reduction and Graph Theory
Gaëtan Senelle
,
Christophe Guyeux
,
Guislaine Refrégier
,
Christophe Sola
Article dans une revue
hal-03932845v1
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Mycobacterium tuberculosis genetic features associated with pulmonary tuberculosis severity
Charlotte Genestet
,
Guislaine Refrégier
,
Elisabeth Hodille
,
Rima Zein-Eddine
,
Adrien Le Meur
Article dans une revue
hal-03836738v1
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Molecular epidemiology of Mycobacterium tuberculosis in Brazil before the whole genome sequencing era: a literature review
Emilyn Costa Conceição
,
Richard Steiner Salvato
,
Karen Machado Gomes
,
Arthur Emil dos Santos Guimarães
,
Marília Lima da Conceição
Article dans une revue
hal-04245111v1
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CRISPRbuilder-TB: “CRISPR-builder for tuberculosis”. Exhaustive reconstruction of the CRISPR locus in mycobacterium tuberculosis complex using SRA
Christophe Guyeux
,
Christophe Sola
,
Camille Noûs
,
Guislaine Refrégier
Article dans une revue
hal-04244566v1
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CRISPRbuilder-TB: “CRISPR-builder for tuberculosis”. Exhaustive reconstruction of the CRISPR locus in mycobacterium tuberculosis complex using SRA
Christophe Guyeux
,
Christophe Sola
,
Camille Noûs
,
Guislaine Refrégier
Article dans une revue
hal-03221882v1
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NTF-RINT, a new method for the epidemiological surveillance of MDR Mycobacterium tuberculosis L2/Beijing strains
Bernice J. Klotoe
,
Natalia Kurepina
,
Elena Zholdibayeva
,
S. Panaiotov
,
Barry N. Kreiswirth
Article dans une revue
hal-02502306v1
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Prediction of the hidden genotype of mixed infection strains in Iranian tuberculosis patients
Mansour Kargarpour Kamakoli
,
Ghazaleh Farmanfarmaei
,
Morteza Masoumi
,
Sharareh Khanipour
,
Safoora Gharibzadeh
Article dans une revue
hal-02542669v1
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Unexpected diversity of CRISPR unveils some evolutionary patterns of repeated sequences in Mycobacterium tuberculosis
Guislaine Refrégier
,
Christophe Sola
,
Christophe Guyeux
Article dans une revue
hal-03102328v1
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Spoligotyping of Mycobacterium tuberculosis isolates using Luminex®-based method in Lebanon
Khaldoun Masoud
,
George F. Araj
,
Lina Reslan
,
Sukayna Fadlallah
,
Michel Wehbe
Article dans une revue
hal-02944245v1
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Unexpected diversity of CRISPR unveils some evolutionary patterns of repeated sequences in Mycobacterium tuberculosis
Guislaine Refrégier
,
Christophe Sola
,
Christophe Guyeux
Article dans une revue
hal-04244580v1
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Mycobacterium tuberculosis lineage 1 genetic diversity in Pará, Brazil, suggests common ancestry with east-African isolates potentially linked to historical slave trade
Emilyn Costa Conceição
,
Guislaine Refrégier
,
Harrison Magdinier Gomes
,
Xavier Olessa-Daragon
,
Francesc Coll
Article dans une revue
hal-02169940v1
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Diversity of Mycobacterium tuberculosis in the Middle Fly District of Western Province, Papua New Guinea: microbead-based spoligotyping using DNA from Ziehl-Neelsen-stained microscopy preparations
Vanina Guernier-Cambert
,
Tanya Diefenbach-Elstob
,
Bernice J. Klotoe
,
Graham Burgess
,
Daniel Pelowa
Article dans une revue
hal-02345362v1
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Genomic characterization of MDR/XDR-TB in Kazakhstan by a combination of high-throughput methods predominantly shows the ongoing transmission of L2/Beijing 94-32 central Asian/Russian clusters
B. J. Klotoe
,
S. Kacimi
,
E. Costa-Conceicão
,
H. M. Gomes
,
R. B. Barcellos
Article dans une revue
hal-02170568v1
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Reverse line probe assay for cheap detection of Single Nucleotide Polymorphisms in Mycobacterium tuberculosis
Memona Yasmin
,
Guislaine Refrégier
,
Rubina Tabassum Siddiqui
,
Rizwan Iqbal
,
Shahid Ahmad Abbasi
Article dans une revue
hal-02185061v1
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TB-EFI, a novel 18-Plex microbead-based method for prediction of second-line drugs and ethambutol resistance in Mycobacterium tuberculosis complex
Bernice J. Klotoe
,
Barbara Molina-Moya
,
Harrison Magdinier Gomes
,
Michel K. Gomgnimbou
,
Lorenna Oliveira Suzarte
Article dans une revue
hal-02179879v1
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Assessment of tuberculosis spatial hotspot areas in Antananarivo, Madagascar, by combining spatial analysis and genotyping
Noël Harijaona Ratovonirina
,
Niaina Rakotosamimanana
,
Solohery Lalaina Razafimahatratra
,
Mamy Serge Raherison
,
Guislaine Refrégier
Article dans une revue
pasteur-01649214v1
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Correlation between the BACTEC MGIT 960 culture system with Genotype MTBDRplus and TB-SPRINT in multidrug resistant Mycobacterium tuberculosis clinical isolates from Brazil
Nayanne Gama Teixeira Dantas
,
Phillip Noel Suffys
,
Wânia da Silva Carvalho
,
Harrison Magdinier Gomes
,
Isabela Neves De Almeida
Article dans une revue
hal-02191696v1
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Molecular Characterization of Mycobacterium tuberculosis Strains with TB-SPRINT
Barbara Molina-Moya
,
Michel Kiréopori Gomgnimbou
,
Carmen Lafoz
,
Alicia Lacoma
,
Cristina Prat
Article dans une revue
hal-02390044v1
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Quick and cheap MIRU-VNTR typing of Mycobacterium tuberculosis species complex using duplex PCR.
Memona Yasmin
,
Stéphanie Le Moullec
,
Rubina Tabassum Siddiqui
,
Jessica de Beer
,
Christophe Sola
Article dans une revue
hal-01439321v1
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Turkish and Japanese Mycobacterium tuberculosis sublineages share a remote common ancestor.
Guislaine Refrégier
,
Edgar Abadia
,
Tomoshige Matsumoto
,
Hiromi Ano
,
Tetsuya Takashima
Article dans une revue
hal-01439404v1
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Genomics and Machine Learning for Taxonomy Consensus: The Mycobacterium tuberculosis Complex Paradigm
Jérôme Azé
,
Christophe Sola
,
Jian Zhang
,
Florian Lafosse-Marin
,
Memona Yasmin
Article dans une revue
lirmm-01348924v1
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Genetic diversity and molecular epidemiology of multidrug-resistant Mycobacterium tuberculosis in Minas Gerais State, Brazil.
Nayanne Gama Teixeira Dantas
,
Phillip Noel Suffys
,
Wânia da Silva Carvalho
,
Harrison Magdinier Gomes
,
Isabela Neves de Almeida
Article dans une revue
hal-01430798v1
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Validation of a microbead-based format for spoligotyping of Legionella pneumophila
Michel Kiréopori Gomgnimbou
,
Christophe Ginevra
,
Caroline Peron-Cane
,
Margaux Versapuech
,
Guislaine Refrégier
Article dans une revue
hal-01909052v1
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PERFORMANCE OF A HYBRID FUNGAL PATHOGEN ON PURE-SPECIES AND HYBRID HOST PLANTS
Amanda K Gibson
,
Guislaine Refrégier
,
Michael E Hood
,
Tatiana Giraud
Article dans une revue
hal-01302688v1
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"Spoligoriftyping," a dual-priming-oligonucleotide-based direct-hybridization assay for tuberculosis control with a multianalyte microbead-based hybridization system.
Michel Kiréopori Gomgnimbou
,
Edgar Abadia
,
Jian Zhang
,
Guislaine Refrégier
,
Stefan Panaiotov
Article dans une revue
hal-00763191v1
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Spoligotyping of Mycobacterium africanum, Burkina Faso.
Michel K Gomgnimbou
,
Guislaine Refrégier
,
Serge P Diagbouga
,
Sanou Adama
,
Antoinette Kaboré
Article dans une revue
hal-00763744v1
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A molecular epidemiological and genetic diversity study of tuberculosis in Ibadan, Nnewi and Abuja, Nigeria.
Lovett Lawson
,
Jian Zhang
,
Michel K Gomgnimbou
,
Saddiq T Abdurrahman
,
Stéphanie Le Moullec
Article dans une revue
hal-00763747v1
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The use of microbead-based spoligotyping for Mycobacterium tuberculosis complex to evaluate the quality of the conventional method: Providing guidelines for Quality Assurance when working on membranes
Edgar Abadia
,
Jian Zhang
,
Viviana Ritacco
,
Kristin Kremer
,
Raymond Ruimy
Article dans une revue
pasteur-00670610v1
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A first assessment of the genetic diversity of Mycobacterium tuberculosis complex in Cambodia.
Jian Zhang
,
Seiha Heng
,
Stéphanie Le Moullec
,
Guislaine Refregier
,
Brigitte Gicquel
Article dans une revue
pasteur-00670614v1
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Using affinity propagation for identifying subspecies among clonal organisms: lessons from M. tuberculosis
Claudio Borile
,
Mathieu Labarre
,
Silvio Franz
,
Christophe Sola
,
Guislaine Refrégier
Article dans une revue
pasteur-00670608v1
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No Evidence of Reproductive Character Displacement between Two Sister Fungal Species Causing Anther Smut Disease in Silene
Guislaine Refrégier
,
Michael e. Hood
,
Tatiana Giraud
International Journal of Plant Sciences, 2010, 171 (8), pp.847-859. ⟨10.1086/655867⟩
Article dans une revue
hal-02333052v1
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Mycobacterium tuberculosis complex CRISPR genotyping: improving efficiency, throughput and discriminative power of 'spoligotyping' with new spacers and a microbead-based hybridization assay.
Jian Zhang
,
Edgar Abadia
,
Guislaine Refregier
,
Silva Tafaj
,
Maria Laura Boschiroli
Article dans une revue
hal-00527223v1
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Rapidly evolving genes in pathogens: Methods for detecting positive selection and examples among fungi, bacteria, viruses and protists
Gabriela Aguileta
,
Guislaine Refrégier
,
Roxana Yockteng
,
Elisabeth Fournier
,
Tatiana Giraud
Article dans une revue
hal-02333119v1
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Speciation in fungi
Tatiana Giraud
,
Guislaine Refrégier
,
Mickaël Le Gac
,
Damien M. de Vienne
,
Michael E Hood
Article dans une revue
hal-01800069v1
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Cophylogeny of the anther smut fungi and their caryophyllaceous hosts: Prevalence of host shifts and importance of delimiting parasite species for inferring cospeciation
Guislaine Refrégier
,
Mickael Le Gac
,
Florian Jabbour
,
Alex Widmer
,
Jacqui A. Shykoff
Article dans une revue
hal-02333196v1
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Interaction between Wall Deposition and Cell Elongation in Dark-Grown Hypocotyl Cells in Arabidopsis
Guislaine Refrégier
,
Sandra Pelletier
,
Danielle Jaillard
,
Herman Höfte
Article dans une revue
hal-04373076v1
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Resistance against herbicide isoxaben and cellulose deficiency caused by distinct mutations in same cellulose synthase isoform CESA6
Thierry T. Desprez
,
Samantha S. Vernhettes
,
Mathilde Fagard
,
Guislaine Refregier
,
Thierry Desnos
Article dans une revue
hal-02681400v1
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PROCUSTE1 encodes a cellulose synthase required for normal cell elongation specifically in roots and dark-grown hypocotyls of Arabidopsis
Mathilde Fagard
,
Thierry Desnos
,
Thierry T. Desprez
,
Florence Goubet
,
Guislaine Refregier
Article dans une revue
hal-02698876v1
|