Helene Rimbert

44
Documents
Affiliations actuelles
  • Génétique Diversité et Ecophysiologie des Céréales (GDEC)
  • Plateforme Auvergne Bioinformatique (AuBi)
  • Université Clermont Auvergne (UCA)
Contact

Publications

Publications

Exploring wheat diversity with low-pass long-read sequencing

Hélène Rimbert , Vincent Pailler , Elodie Belmonte , Véronique Gautier , Benjamin Aubier et al.
3eme colloque INRAE Genomics, INRAE Genomics, Jun 2025, Clermont- Ferrand, France
Communication dans un congrès hal-05122908 v1

Breed wheat pangenome graph provides access to gene diversity, structural variations and key agronomic loci architecture

Djémilatou Ouandaogo , Vincent Pailler , Hélène Rimbert , Pierre Sourdille , Pauline Lasserre-Zuber
JOBIM 2025, Société Française de BioInformatique (SFBI),Institut Français de Bioinformatique (IFB),Modélisation et Méthodologie (GDR BIMMM), Jul 2025, Bordeaux, France
Communication dans un congrès hal-05194720 v1

Bread wheat pangenome Graphs

Pauline Lasserre , Djemila Ouandaogo , Hélène Rimbert , Vincent Pailler
l'AG du projet PEPR AgroDiv, Jul 2025, Versailles, France
Communication dans un congrès hal-05194387 v1

Presence/Absence variation contributes to adaptation, agronomic traits variation and hybrid performances in maize

Clément Mabire , Romane Guilbaud , Jorge Duarte , Aude Darracq , Ali Piranni et al.
XXVth EUCARPIA Maize and Sorghum Conference – Current challenges and new methods for Maize and Sorghum Breeding, May 2022, Belgrade, Serbia
Communication dans un congrès hal-04225603 v1

Contribution des Insertion/Délétions à la variations des caractères, l’adaptation et aux performances hybrides au moyen d’une puce de génotypage haut débit

Clément Mabire , Jorge Duarte , Johann Joets , Julie B Fiévet , Romane Guilbaud et al.
Colloque GIS-BV, Jul 2019, Paris, France
Communication dans un congrès hal-02787704 v1
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Development of a new high throughput 105K Presence/Absence Variation genotyping array for quantitative genetic studies

Clément Mabire , Jorge Duarte , Aude Darracq , Ali Pirani , Hélène Rimbert et al.
60. Maize Genetics Conference, Mar 2018, St Malo, France
Communication dans un congrès hal-02787197 v1

Comparative genomics of two Fusarium graminearum strains of contrasting aggressiveness in bread wheat

Francis Fabre , Manon Vignassa , Hélène Rimbert , David Bornaque , Caroline Chebance et al.
14. European Fusarium Seminar, Apr 2018, Tulln, Austria
Communication dans un congrès hal-02293573 v1

Design of high-troughput Presence/Absence Variant genotyping array in maize based on Affymetrix Technology

Jorge Duarte , Aude Darracq , Hélène Rimbert , Clementine Vitte , Johann Joets et al.
Colloque EPGV 2018 "Détection, Gestion et Analyse du Polymorphisme des Génomes Végétaux", Oct 2018, Evry, France
Communication dans un congrès hal-02787234 v1

Identifying sequence features impacting recombination in wheat: lessons from chromosome 3B

Pierre Sourdille , Benoît Darrier , Frédéric Choulet , François Balfourier , Hélène Rimbert et al.
13. Int. Wheat Genet. Symp, Apr 2017, Tulln, France
Communication dans un congrès hal-02340493 v1

Sequencing and Analysis of Wheat Chromosome 1B

Frédéric Choulet , Hélène Rimbert , Ambre-Aurore Josselin , Benoît Darrier , Pierre Sourdille et al.
Plant and Animal Genome XXIV Conference; IWGSC Standards and Protocoles Workshop, Jan 2016, San Diego, United States
Communication dans un congrès hal-02306172 v1

Overview of Actual and Ancestral Recombination in Relationship with the Sequence in Wheat: Focus on 3B Chromosome

Benoît Darrier , Alain Loussert , Hélène Rimbert , Julien Navarro , Frédéric Choulet et al.
Plant and Animals Genomics Conference XXIV / Recombination Mechanism Workshop, Jan 2016, San Diego, United States
Communication dans un congrès hal-02340468 v1

Genetic architecture of kernels quality traits in an evolutionary prebreeding population of durum wheat

Jacques David , Ingrid Vilmus , Vincent Ranwez , Pierre Roumet , Muriel Tavaud et al.
From Seed to Pasta and Beyond: a Sustainable Durum Wheat Chain for Food Security and Healthy Lives. FSTP 2015, May 2015, Milan, Italy
Communication dans un congrès hal-02793571 v1

Structural variations of the hexaploid wheat chromosome 3B

Emeric Dynomant , Hélène Rimbert , Jan Vrána , Marie Kubaláková , Jaroslav Dolezel et al.
9. International Wheat Conference, ICMS Australasia. AUS., Sep 2015, Sydney, Australia. 195 p
Communication dans un congrès hal-02740939 v1

Characterization of recombination hot spots in bread wheat: Example of chromosome 3B

Benoît Darrier , Alain Loussert , Hélène Rimbert , Marie-Claire Debote , Frédéric Choulet et al.
Workshop Series DynaGeV (Dynamique des Génomes Végétaux), May 2015, Toulouse, France
Communication dans un congrès hal-01318721 v1

A new high-throughput approach to characterize Presence/Absence Variant in Maize based on Affymetrix technology

Stephane S. Nicolas , Aude Darracq , Ali Pirani , Hélène Rimbert , Clément Mabire et al.
Workshop Series DynaGeV (Dynamique des Génomes Végétaux), May 2015, Toulouse, France
Communication dans un congrès hal-02795342 v1
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Construction and analysis of pangenomic graphs in soft wheat from 14 public genomes

Djémilatou Ouandaogo , Vincent Pailler , Hélène Rimbert , Pierre Sourdille , Pauline Lasserre-Zuber
JOBIM 2025, Jul 2025, Bordeaux, France. , pp.1
Poster de conférence hal-05194677 v1
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IWGSC 2.0: Implementing the Wheat Diversity Project

Joshua C Stein , Victor Llaca , Kevin Fengler , Catalina Johnson , Isabelle Caugant et al.
PAG 2024 Australia, Sep 2024, Perth, Australia
Poster de conférence hal-04913949 v1
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Analyse de diversité d'un panel de pré-breeding de blé tendre par une approche transcriptomique

Hélène Rimbert , Frédéric Choulet , Odile Argillier , Jérôme Auzanneau , Mark Davey et al.
9 ème rencontres du FSOV -2024, Apr 2024, Paris, France
Poster de conférence hal-04712172 v1
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Have a break: how to decipher Spo11.2 role in Triticum aestivum?

Fatiha Benyahya , Isabelle Nadaud , Ludovic Georges , Alain Loussert , Isabelle Lhommet et al.
EMBO Meiosis Workshop 25th-29th August 2019 La Rochelle, Aug 2019, La Rochelle, France
Poster de conférence hal-04284850 v1

Development of a new high-throughput 105K presence/absence variation genotyping array for quantitative genetic studies.

C. Mabire , J. Duarte , A. Darracq , A. Piranni , H. Rimbert et al.
60th Annual Maize Genetics Conference, Mar 2018, Saint-Malo, France
Poster de conférence hal-04478801 v1

Deciphering strucutral variation in wheat genome using resequencing data

Romain de Oliveira , Emeric Dynomant , Hélène Rimbert , Jaroslav Dolezel , Federica Cattonaro et al.
PAG XXVI - Plant and Animal Genome Conference, Jan 2018, San Diego, United States. , 2018
Poster de conférence hal-02787820 v1
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Structural and Functional Annotation of the Wheat Genome

Frédéric Choulet , Xi Wang , Manuel Spannagl , David Swarbreck , Hélène Rimbert et al.
Rudi Appels, Kellye Eversole, Catherine Feuillet, Dusti Gallagher. The Wheat Genome, Springer International Publishing, pp.51-73, 2024, Compendium of Plant Genomes, ⟨10.1007/978-3-031-38294-9_4⟩
Chapitre d'ouvrage hal-04297331 v1
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Genomes of Aegilops umbellulata provide new insights into unique structural variations and genetic diversity in the U‐genome for wheat improvement

Jatinder Singh , Santosh Gudi , Peter J Maughan , Zhaohui Liu , James Kolmer et al.
Plant Biotechnology Journal, 2024, pp.1-15. ⟨10.1111/pbi.14470⟩
Article dans une revue hal-04707299 v1
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All families of transposable elements were active in the recent wheat genome evolution and polyploidy had no impact on their activity

Nathan Papon , Pauline Lasserre-Zuber , Hélène Rimbert , Romain de Oliveira , Etienne Paux et al.
Plant Genome, 2023, ⟨10.1002/tpg2.20347⟩
Article dans une revue hal-04143737 v1
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Bread wheat (T. aestivum) variability: Phenotypic and genotypic data from 75 varieties

Mélanie Lavoignat , Emmanuelle Bancel , Hélène Rimbert , Sandrine Bagnon , Michaël Benigna et al.
Data in Brief, 2023, 46, pp.108807. ⟨10.1016/j.dib.2022.108807⟩
Article dans une revue hal-04027932 v1
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Location and Identification on Chromosome 3B of Bread Wheat of Genes Affecting Chiasma Number

Benoit Darrier , Isabelle Colas , Hélène Rimbert , Frédéric Choulet , Jeanne Bazile et al.
Article dans une revue hal-03766369 v1
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Long-read and chromosome-scale assembly of the hexaploid wheat genome achieves high resolution for research and breeding

Jean-Marc Aury , Stefan Engelen , Benjamin Istace , Cécile Monat , Pauline Lasserre-Zuber et al.
GigaScience, 2022, 11, pp.1-18. ⟨10.1093/gigascience/giac034⟩
Article dans une revue hal-03658639 v1
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Optical maps refine the bread wheat Triticum aestivum cv. Chinese Spring genome assembly

Tingting Zhu , Le Wang , Hélène Rimbert , Juan Rodriguez , Karin Deal et al.
The Plant Journal, 2021, ⟨10.1111/tpj.15289⟩
Article dans une revue hal-03285883 v1
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Comparative genomics of eight fusarium graminearum strains with contrasting aggressiveness reveals an expanded open pangenome and extended effector content signatures

Tarek Alouane , Hélène Rimbert , Jörg Bormann , Gisela Abigail Gonzalez-Montiel , Sandra Loesgen et al.
International Journal of Molecular Sciences, 2021, 22 (12), ⟨10.3390/ijms22126257⟩
Article dans une revue hal-03287092 v1
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Structural variations affecting genes and transposable elements of chromosome 3B in wheats

Romain de Oliveira , Hélène Rimbert , François Balfourier , Jonathan Kitt , Emeric Dynomant et al.
Frontiers in Genetics, 2020, 11, 891/15 p. ⟨10.3389/fgene.2020.00891⟩
Article dans une revue hal-02917729 v1
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SPO11.2 is essential for programmed double strand break formation during meiosis in bread wheat (Triticum aestivum L.)

Fatiha Benyahya , Isabelle Nadaud , Olivier da Ines , Hélène Rimbert , Charles I. White et al.
The Plant Journal, 2020, 104 (1), pp.30-43. ⟨10.1111/tpj.14903⟩
Article dans une revue hal-02888993 v1
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Worldwide phylogeography and history of wheat genetic diversity

François Balfourier , Sophie Bouchet , Sandra Robert , Romain de Oliveira , Hélène Rimbert et al.
Science Advances , 2019, 5 (5), pp.eaav0536. ⟨10.1126/sciadv.aav0536⟩
Article dans une revue hal-02172516 v1

High throughput genotyping of structural variations in a complex plant genome using an original Affymetrix® axiom® array

Clément Mabire , Jorge Duarte , Aude Darracq , Ali Pirani , Hélène Rimbert et al.
BMC Genomics, 2019, 20 (1), ⟨10.1186/s12864-019-6136-9⟩
Article dans une revue hal-02393099 v1
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Linking the International Wheat Genome Sequencing Consortium bread wheat reference genome sequence to wheat genetic and phenomic data

Michael Alaux , Jane Rogers , Thomas Letellier , Raphaël Flores , Françoise Alfama et al.
Genome Biology, 2018, 19 (1), pp.905-911. ⟨10.1186/s13059-018-1491-4⟩
Article dans une revue hal-02278879 v1

Shifting the limits in wheat research and breeding using a fully annotated reference genome

Rudi Appels , Kellye Eversole , Nils Stein , Catherine Feuillet , Beat Keller et al.
Science, 2018, 361 (6403), ⟨10.1126/science.aar7191⟩
Article dans une revue hal-04331004 v1
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High throughput SNP discovery and genotyping in hexaploid wheat

Hélène Rimbert , Benoît Darrier , Julien Navarro , Jonathan Kitt , Frédéric Choulet et al.
PLoS ONE, 2018, 13 (1), pp.1-19. ⟨10.1371/journal.pone.0186329⟩
Article dans une revue hal-02628543 v1

Shifting the limits in wheat research and breeding using a fully annotated reference genome

. International Wheat Genome Sequencing Consortium (iwgsc) , Arnaud Bellec , Helene Berges , Sonia Vautrin , Michael Alaux et al.
Science, 2018, 361 (6403), pp.7191. ⟨10.1126/science.aar7191⟩
Article dans une revue hal-01885399 v1
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Genome sequence of fusarium graminearum strain MDC_Fg1, isolated from bread wheat grown in France

Tarek Alouane , Hélène Rimbert , Francis Fabre , Florence Cambon , Thierry Langin et al.
Microbiology Resource Announcements, 2018, 7 (19), ⟨10.1128/MRA.01260-18⟩
Article dans une revue hal-02622524 v1

High-Resolution Mapping of Crossover Events in the Hexaploid Wheat Genome Suggests a Universal Recombination Mechanism

Benoit Darrier , Hélène Rimbert , François Balfourier , Lise Pingault , Ambre-Aurore Josselin et al.
Genetics, 2017, 206 (3), pp.1373-1388. ⟨10.1534/genetics.116.196014⟩
Article dans une revue hal-04686468 v1

Exploiting the repetitive fraction of the wheat genome for high-throughput single-nucleotide polymorphism discovery and Genotyping

Nelly Cubizolles , Elodie Rey , Frédéric Choulet , Hélène Rimbert , Christel C. Laugier et al.
PLANT GENOME, 2016, 9 (1), ⟨10.3835/plantgenome2015.09.0078⟩
Article dans une revue hal-02635405 v1

Genome interplay in the grain transcriptome of hexaploid bread wheat

Matthias Pfeifer , Karl G. Kugler , Simen R. Sandve , Bujie Zhan , Heidi Rudi et al.
Science, 2014, 345 (6194), pp.287-287. ⟨10.1126/science.1250091⟩
Article dans une revue hal-02889033 v1

Ancient hybridizations among the ancestral genomes of bread wheat

T. Marcussen , S. Sandve , L. Heier , M. Spannagl , M. Pfeifer et al.
Science, 2014, 345 (6194), pp.1250092-1250092. ⟨10.1126/science.1250092⟩
Article dans une revue hal-02889053 v1