Helene Rimbert

47
Documents
Affiliations actuelles
  • Génétique Diversité et Ecophysiologie des Céréales (GDEC)
  • Plateforme Auvergne Bioinformatique (AuBi)
  • Université Clermont Auvergne (UCA)
Contact

Publications

Publications

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Preliminary Results from the IWGSC Wheat Diversity Project

Joshua C Stein , Kevin Fengler , Victor Llaca , Elodie Belmonte , Vincent Pailler et al.

PAG 33, Jan 2026, San diego, United States

Communication dans un congrès hal-05518160v1

Exploring wheat diversity with low-pass long-read sequencing

Hélène Rimbert , Vincent Pailler , Elodie Belmonte , Véronique Gautier , Benjamin Aubier et al.

3eme colloque INRAE Genomics, INRAE Genomics, Jun 2025, Clermont- Ferrand, France

Communication dans un congrès hal-05122908v1

Breed wheat pangenome graph provides access to gene diversity, structural variations and key agronomic loci architecture

Pauline Lasserre-Zuber , Djémilatou Ouandaogo , Vincent Pailler , Hélène Rimbert , Pierre Sourdille

JOBIM 2025, Société Française de BioInformatique (SFBI),Institut Français de Bioinformatique (IFB),Modélisation et Méthodologie (GDR BIMMM), Jul 2025, Bordeaux, France

Communication dans un congrès hal-05194720v1

Bread wheat pangenome Graphs

Pauline Lasserre-Zuber , Djemila Ouandaogo , Hélène Rimbert , Vincent Pailler

l'AG du projet PEPR AgroDiv, Jul 2025, Versailles, France

Communication dans un congrès hal-05194387v1

Presence/Absence variation contributes to adaptation, agronomic traits variation and hybrid performances in maize

Clément Mabire , Romane Guilbaud , Jorge Duarte , Aude Darracq , Ali Piranni et al.

XXVth EUCARPIA Maize and Sorghum Conference – Current challenges and new methods for Maize and Sorghum Breeding, May 2022, Belgrade, Serbia

Communication dans un congrès hal-04225603v1

Contribution des Insertion/Délétions à la variations des caractères, l’adaptation et aux performances hybrides au moyen d’une puce de génotypage haut débit

Clément Mabire , Jorge Duarte , Johann Joets , Julie B Fiévet , Romane Guilbaud et al.

Colloque GIS-BV, Jul 2019, Paris, France

Communication dans un congrès hal-02787704v1
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Development of a new high throughput 105K Presence/Absence Variation genotyping array for quantitative genetic studies

Clément Mabire , Jorge Duarte , Aude Darracq , Ali Pirani , Hélène Rimbert et al.

60. Maize Genetics Conference, Mar 2018, St Malo, France

Communication dans un congrès hal-02787197v1

Comparative genomics of two Fusarium graminearum strains of contrasting aggressiveness in bread wheat

Francis Fabre , Manon Vignassa , Hélène Rimbert , David Bornaque , Caroline Chebance et al.

14. European Fusarium Seminar, Apr 2018, Tulln, Austria

Communication dans un congrès hal-02293573v1

Design of high-troughput Presence/Absence Variant genotyping array in maize based on Affymetrix Technology

Jorge Duarte , Aude Darracq , Hélène Rimbert , Clementine Vitte , Johann Joets et al.

Colloque EPGV 2018 "Détection, Gestion et Analyse du Polymorphisme des Génomes Végétaux", Oct 2018, Evry, France

Communication dans un congrès hal-02787234v1

Identifying sequence features impacting recombination in wheat: lessons from chromosome 3B

Pierre Sourdille , Benoît Darrier , Frédéric Choulet , François Balfourier , Hélène Rimbert et al.

13. Int. Wheat Genet. Symp, Apr 2017, Tulln, France

Communication dans un congrès hal-02340493v1

Sequencing and Analysis of Wheat Chromosome 1B

Frédéric Choulet , Hélène Rimbert , Ambre-Aurore Josselin , Benoît Darrier , Pierre Sourdille et al.

Plant and Animal Genome XXIV Conference; IWGSC Standards and Protocoles Workshop, Jan 2016, San Diego, United States

Communication dans un congrès hal-02306172v1

Overview of Actual and Ancestral Recombination in Relationship with the Sequence in Wheat: Focus on 3B Chromosome

Benoît Darrier , Alain Loussert , Hélène Rimbert , Julien Navarro , Frédéric Choulet et al.

Plant and Animals Genomics Conference XXIV / Recombination Mechanism Workshop, Jan 2016, San Diego, United States

Communication dans un congrès hal-02340468v1

Genetic architecture of kernels quality traits in an evolutionary prebreeding population of durum wheat

Jacques David , Ingrid Vilmus , Vincent Ranwez , Pierre Roumet , Muriel Tavaud et al.

From Seed to Pasta and Beyond: a Sustainable Durum Wheat Chain for Food Security and Healthy Lives. FSTP 2015, May 2015, Milan, Italy

Communication dans un congrès hal-02793571v1

Structural variations of the hexaploid wheat chromosome 3B

Emeric Dynomant , Hélène Rimbert , Jan Vrána , Marie Kubaláková , Jaroslav Dolezel et al.

9. International Wheat Conference, ICMS Australasia. AUS., Sep 2015, Sydney, Australia. 195 p

Communication dans un congrès hal-02740939v1

Characterization of recombination hot spots in bread wheat: Example of chromosome 3B

Benoît Darrier , Alain Loussert , Hélène Rimbert , Marie-Claire Debote , Frédéric Choulet et al.

Workshop Series DynaGeV (Dynamique des Génomes Végétaux), May 2015, Toulouse, France

Communication dans un congrès hal-01318721v1

A new high-throughput approach to characterize Presence/Absence Variant in Maize based on Affymetrix technology

Stephane S. Nicolas , Aude Darracq , Ali Pirani , Hélène Rimbert , Clément Mabire et al.

Workshop Series DynaGeV (Dynamique des Génomes Végétaux), May 2015, Toulouse, France

Communication dans un congrès hal-02795342v1
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Preliminary Results from the IWGSC Wheat Diversity Project

Joshua C Stein , Catalina Johnson , Victor Llaca , Kevin Fengler , Isabelle Caugant et al.

PAG 33, Jan 2026, San Diego, United States

Poster de conférence hal-05519131v1
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IWGSC 2.0: Wheat Genome Curation for Future Crop Resilience The International Wheat Genome Sequencing Consortium

Catalina Johnson , Joshua C Stein , Victor Llaca , Kevin Fengler , Isabelle Caugant et al.

PAG32, 2025, San Diego, United States

Poster de conférence hal-05519247v1
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Construction and analysis of pangenomic graphs in soft wheat from 14 public genomes

Djémilatou Ouandaogo , Vincent Pailler , Hélène Rimbert , Pierre Sourdille , Pauline Lasserre-Zuber

JOBIM 2025, Jul 2025, Bordeaux, France. , pp.1

Poster de conférence hal-05194677v1
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Analyse de diversité d'un panel de pré-breeding de blé tendre par une approche transcriptomique

Hélène Rimbert , Frédéric Choulet , Odile Argillier , Jérôme Auzanneau , Mark Davey et al.

9 ème rencontres du FSOV -2024, Apr 2024, Paris, France

Poster de conférence hal-04712172v1
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IWGSC 2.0: Implementing the Wheat Diversity Project

Joshua C Stein , Victor Llaca , Kevin Fengler , Catalina Johnson , Isabelle Caugant et al.

PAG 2024 Australia, Sep 2024, Perth, Australia

Poster de conférence hal-04913949v1
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Have a break: how to decipher Spo11.2 role in Triticum aestivum?

Fatiha Benyahya , Isabelle Nadaud , Ludovic Georges , Alain Loussert , Isabelle Lhommet et al.

EMBO Meiosis Workshop 25th-29th August 2019 La Rochelle, Aug 2019, La Rochelle, France

Poster de conférence hal-04284850v1

Development of a new high-throughput 105K presence/absence variation genotyping array for quantitative genetic studies.

C. Mabire , J. Duarte , A. Darracq , A. Piranni , H. Rimbert et al.

60th Annual Maize Genetics Conference, Mar 2018, Saint-Malo, France

Poster de conférence hal-04478801v1

Deciphering strucutral variation in wheat genome using resequencing data

Romain de Oliveira , Emeric Dynomant , Hélène Rimbert , Jaroslav Dolezel , Federica Cattonaro et al.

PAG XXVI - Plant and Animal Genome Conference, Jan 2018, San Diego, United States. , 2018

Poster de conférence hal-02787820v1
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Structural and Functional Annotation of the Wheat Genome

Frédéric Choulet , Xi Wang , Manuel Spannagl , David Swarbreck , Hélène Rimbert et al.

Rudi Appels, Kellye Eversole, Catherine Feuillet, Dusti Gallagher. The Wheat Genome, Springer International Publishing, pp.51-73, 2024, Compendium of Plant Genomes, ⟨10.1007/978-3-031-38294-9_4⟩

Chapitre d'ouvrage hal-04297331v1
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Genomes of Aegilops umbellulata provide new insights into unique structural variations and genetic diversity in the U‐genome for wheat improvement

Jatinder Singh , Santosh Gudi , Peter J Maughan , Zhaohui Liu , James Kolmer et al.

Plant Biotechnology Journal, 2024, pp.1-15. ⟨10.1111/pbi.14470⟩

Article dans une revue hal-04707299v1
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All families of transposable elements were active in the recent wheat genome evolution and polyploidy had no impact on their activity

Nathan Papon , Pauline Lasserre-Zuber , Hélène Rimbert , Romain de Oliveira , Etienne Paux et al.

Plant Genome, 2023, ⟨10.1002/tpg2.20347⟩

Article dans une revue hal-04143737v1
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Bread wheat (T. aestivum) variability: Phenotypic and genotypic data from 75 varieties

Mélanie Lavoignat , Emmanuelle Bancel , Hélène Rimbert , Sandrine Bagnon , Michaël Benigna et al.

Data in Brief, 2023, 46, pp.108807. ⟨10.1016/j.dib.2022.108807⟩

Article dans une revue (data paper) hal-04027932v1
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Location and Identification on Chromosome 3B of Bread Wheat of Genes Affecting Chiasma Number

Benoit Darrier , Isabelle Colas , Hélène Rimbert , Frédéric Choulet , Jeanne Bazile et al.

Plants, 2022, 11, ⟨10.3390/plants11172281⟩

Article dans une revue hal-03766369v1
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Long-read and chromosome-scale assembly of the hexaploid wheat genome achieves high resolution for research and breeding

Jean-Marc Aury , Stefan Engelen , Benjamin Istace , Cécile Monat , Pauline Lasserre-Zuber et al.

GigaScience, 2022, 11, pp.1-18. ⟨10.1093/gigascience/giac034⟩

Article dans une revue hal-03658639v1
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Optical maps refine the bread wheat Triticum aestivum cv. Chinese Spring genome assembly

Tingting Zhu , Le Wang , Hélène Rimbert , Juan Rodriguez , Karin Deal et al.

The Plant Journal, 2021, ⟨10.1111/tpj.15289⟩

Article dans une revue hal-03285883v1
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Comparative genomics of eight fusarium graminearum strains with contrasting aggressiveness reveals an expanded open pangenome and extended effector content signatures

Tarek Alouane , Hélène Rimbert , Jörg Bormann , Gisela Abigail Gonzalez-Montiel , Sandra Loesgen et al.

International Journal of Molecular Sciences, 2021, 22 (12), ⟨10.3390/ijms22126257⟩

Article dans une revue hal-03287092v1
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Structural variations affecting genes and transposable elements of chromosome 3B in wheats

Romain de Oliveira , Hélène Rimbert , François Balfourier , Jonathan Kitt , Emeric Dynomant et al.

Frontiers in Genetics, 2020, 11, 891/15 p. ⟨10.3389/fgene.2020.00891⟩

Article dans une revue hal-02917729v1
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SPO11.2 is essential for programmed double strand break formation during meiosis in bread wheat (Triticum aestivum L.)

Fatiha Benyahya , Isabelle Nadaud , Olivier da Ines , Hélène Rimbert , Charles I. White et al.

The Plant Journal, 2020, 104 (1), pp.30-43. ⟨10.1111/tpj.14903⟩

Article dans une revue hal-02888993v1
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Worldwide phylogeography and history of wheat genetic diversity

François Balfourier , Sophie Bouchet , Sandra Robert , Romain de Oliveira , Hélène Rimbert et al.

Science Advances , 2019, 5 (5), pp.eaav0536. ⟨10.1126/sciadv.aav0536⟩

Article dans une revue hal-02172516v1

High throughput genotyping of structural variations in a complex plant genome using an original Affymetrix® axiom® array

Clément Mabire , Jorge Duarte , Aude Darracq , Ali Pirani , Hélène Rimbert et al.

BMC Genomics, 2019, 20 (1), ⟨10.1186/s12864-019-6136-9⟩

Article dans une revue hal-02393099v1
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Linking the International Wheat Genome Sequencing Consortium bread wheat reference genome sequence to wheat genetic and phenomic data

Michael Alaux , Jane Rogers , Thomas Letellier , Raphaël Flores , Françoise Alfama et al.

Genome Biology, 2018, 19 (1), pp.905-911. ⟨10.1186/s13059-018-1491-4⟩

Article dans une revue hal-02278879v1
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High throughput SNP discovery and genotyping in hexaploid wheat

Hélène Rimbert , Benoît Darrier , Julien Navarro , Jonathan Kitt , Frédéric Choulet et al.

PLoS ONE, 2018, 13 (1), pp.1-19. ⟨10.1371/journal.pone.0186329⟩

Article dans une revue hal-02628543v1

Shifting the limits in wheat research and breeding using a fully annotated reference genome

Rudi Appels , Kellye Eversole , Nils Stein , Catherine Feuillet , Beat Keller et al.

Science, 2018, 361 (6403), ⟨10.1126/science.aar7191⟩

Article dans une revue hal-04331004v1

Shifting the limits in wheat research and breeding using a fully annotated reference genome

. International Wheat Genome Sequencing Consortium (iwgsc) , Arnaud Bellec , Helene Berges , Sonia Vautrin , Michael Alaux et al.

Science, 2018, 361 (6403), pp.7191. ⟨10.1126/science.aar7191⟩

Article dans une revue hal-01885399v1
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Genome sequence of fusarium graminearum strain MDC_Fg1, isolated from bread wheat grown in France

Tarek Alouane , Hélène Rimbert , Francis Fabre , Florence Cambon , Thierry Langin et al.

Microbiology Resource Announcements, 2018, 7 (19), ⟨10.1128/MRA.01260-18⟩

Article dans une revue hal-02622524v1

High-Resolution Mapping of Crossover Events in the Hexaploid Wheat Genome Suggests a Universal Recombination Mechanism

Benoit Darrier , Hélène Rimbert , François Balfourier , Lise Pingault , Ambre-Aurore Josselin et al.

Genetics, 2017, 206 (3), pp.1373-1388. ⟨10.1534/genetics.116.196014⟩

Article dans une revue hal-04686468v1

Exploiting the repetitive fraction of the wheat genome for high-throughput single-nucleotide polymorphism discovery and Genotyping

Nelly Cubizolles , Elodie Rey , Frédéric Choulet , Hélène Rimbert , Christel C. Laugier et al.

PLANT GENOME, 2016, 9 (1), ⟨10.3835/plantgenome2015.09.0078⟩

Article dans une revue hal-02635405v1

Genome interplay in the grain transcriptome of hexaploid bread wheat

Matthias Pfeifer , Karl G. Kugler , Simen R. Sandve , Bujie Zhan , Heidi Rudi et al.

Science, 2014, 345 (6194), pp.287-287. ⟨10.1126/science.1250091⟩

Article dans une revue hal-02889033v1

Ancient hybridizations among the ancestral genomes of bread wheat

T. Marcussen , S. Sandve , L. Heier , M. Spannagl , M. Pfeifer et al.

Science, 2014, 345 (6194), pp.1250092-1250092. ⟨10.1126/science.1250092⟩

Article dans une revue hal-02889053v1