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Automatic analysis of negation cues and scopes for medical texts in French using language models
Salim Sadoune
,
Antoine Richard
,
François Talbot
,
Thomas Guyet
,
Loïc Boussel
et al.
Article dans une revue
hal-04564718
v3
|
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Enhancing Fluorescence Correlation Spectroscopy with machine learning to infer anomalous molecular motion
Nathan Quiblier
,
Jan-Michael Rye
,
Pierre Leclerc
,
Henri Truong
,
Abdelkrim Hannou
et al.
Article dans une revue
hal-04650578
v2
|
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Vascular Segmentation of Functional Ultrasound Images using Deep Learning
Hana Sebia
,
Thomas Guyet
,
Mickaël Pereira
,
Marco Valdebenito
,
Hugues Berry
et al.
Article dans une revue
hal-04744271
v2
|
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A Coupled Neural Field Model for the Standard Consolidation Theory
Lisa Blum Moyse
,
Hugues Berry
Journal of Theoretical Biology, 2024, 588, pp.111818
Article dans une revue
hal-04527872
v1
|
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Quantifying membrane binding and diffusion with fluorescence correlation spectroscopy diffusion laws
Anita Mouttou
,
Erwan Bremaud
,
Julien Noero
,
Rayane Dibsy
,
Coline Arone
et al.
Article dans une revue
hal-04165544
v1
|
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Modelling the modulation of cortical Up-Down state switching by astrocytes
Lisa Blum Moyse
,
Hugues Berry
Article dans une revue
hal-03737962
v3
|
|
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Control of Ca2+ signals by astrocyte nanoscale morphology at tripartite synapses
Audrey Denizot
,
Misa Arizono
,
Valentin Nägerl
,
Hugues Berry
,
Erik de Schutter
Article dans une revue
hal-03582629
v2
|
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Lactate supply overtakes glucose when neural computational and cognitive loads scale up
Yulia Dembitskaya
,
Charlotte Piette
,
Sylvie Perez
,
Hugues Berry
,
Pierre J Magistretti
et al.
Article dans une revue
hal-03922367
v1
|
|
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A model of on/off transitions in neurons of the deep cerebellar nuclei: deciphering the underlying ionic mechanisms
Hugues Berry
,
Stéphane Genet
Article dans une revue
hal-03190183
v1
|
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Anomalous Subdiffusion in Living Cells: Bridging the Gap Between Experiments and Realistic Models Through Collaborative Challenges
Maxime Woringer
,
Ignacio Izeddin
,
Cyril Favard
,
Hugues Berry
Article dans une revue
hal-02871984
v1
|
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A Computational Model of Interactions Between Neuronal and Astrocytic Networks: The Role of Astrocytes in the Stability of the Neuronal Firing Rate
Kerstin Lenk
,
Eero Satuvuori
,
Jules Lallouette
,
Antonio Ladrón-De-Guevara
,
Hugues Berry
et al.
Article dans une revue
hal-02453587
v1
|
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Interdisciplinary Research in Artificial Intelligence: Challenges and Opportunities
Remy Kusters
,
Dusan Misevic
,
Hugues Berry
,
Antoine Cully
,
Yann Le Cunff
et al.
Article dans une revue
hal-03111148
v1
|
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BDNF controls bidirectional endocannabinoid-plasticity at corticostriatal synapses
Giuseppe Gangarossa
,
Sylvie Perez
,
Yulia Dembitskaya
,
Ilya Prokin
,
Hugues Berry
et al.
Article dans une revue
hal-02076121
v1
|
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Simulation of calcium signaling in fine astrocytic processes: effect of spatial properties on spontaneous activity
Audrey Denizot
,
Misa Arizono
,
Valentin U Nägerl
,
Hédi Soula
,
Hugues Berry
Article dans une revue
hal-02184344
v2
|
|
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From in silico astrocyte cell models to neuron-astrocyte network models: A review
Franziska Oschmann
,
Hugues Berry
,
Klaus Obermayer
,
Kerstin Lenk
Article dans une revue
hal-01461928
v2
|
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Astroglial-Kir4.1 in Lateral Habenula Drives Neuronal Bursts to Mediate Depression
Yihui Cui
,
Yan Yang
,
Zheyi Ni
,
Yiyan Dong
,
Guohong Cai
et al.
Article dans une revue
hal-01683191
v1
|
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Dopamine-endocannabinoid interactions mediate spike-timing dependent potentiation in the striatum
Hao Xu
,
Sylvie Perez
,
Amandine Cornil
,
Bérangère Detraux
,
Ilya Prokin
et al.
Article dans une revue
hal-01865929
v2
|
|
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Monitoring gap junctional communication in astrocytes from acute adult mouse brain slices using the gap-FRAP technique
Chenju Yi
,
Jérémy Theillon
,
Annette Koulakoff
,
Hugues Berry
,
Christian Giaume
Article dans une revue
hal-01734652
v1
|
|
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Robustness of STDP to spike timing jitter
Yihui Cui
,
Ilya Prokin
,
Alexandre Mendes
,
Hugues Berry
,
Laurent Venance
Article dans une revue
hal-01788826
v2
|
|
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Modulation of spike-timing dependent plasticity: towards the inclusion of a third factor in computational models
Alexandre Foncelle
,
Alexandre Mendes
,
Joanna Jedrzejewska-Szmek
,
Silvana Valtcheva
,
Hugues Berry
et al.
Article dans une revue
hal-01809075
v2
|
|
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Endocannabinoid dynamics gate spike-timing dependent depression and potentiation
Yihui Cui
,
Ilya Prokin
,
Hao Xu
,
Bruno Delord
,
Stéphane Genet
et al.
Article dans une revue
hal-01279901
v2
|
|
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Quantitative convergence towards a self similar profile in an age-structured renewal equation for subdiffusion
Hugues Berry
,
Thomas Lepoutre
,
Álvaro Mateos González
Acta Applicandae Mathematicae, 2016, 145, pp.15-45
Article dans une revue
hal-01136667
v1
|
|
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Suppression of IGF ‐I signals in neural stem cells enhances neurogenesis and olfactory function during aging
Zayna Chaker
,
Saba Aïd
,
Hugues Berry
,
Martin Holzenberger
Article dans une revue
hal-04027220
v1
|
|
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Endocannabinoids mediate bidirectional striatal spike-timing dependent plasticity
Yihui Cui
,
Vincent Paille
,
Hao Xu
,
Stéphane Genet
,
Bruno Delord
et al.
Article dans une revue
hal-01141205
v1
|
|
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Suppression of IGF-I signals in neural stem cells enhances neurogenesis and olfactory function during aging
Zayna Chaker
,
Saba Aïd
,
Hugues Berry
,
Martin Holzenberger
Article dans une revue
hal-01163564
v1
|
|
|
Sparse short-distance connections enhance calcium wave propagation in a 3D model of astrocyte networks
Jules Lallouette
,
Maurizio de Pittà
,
Eshel Ben Jacob
,
Hugues Berry
Article dans une revue
hal-00967106
v1
|
|
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The topology of astrocyte networks controls the propagation of intercellular calcium waves
Jules Lallouette
,
Maurizio de Pittà
,
Eshel Ben-Jacob
,
Hugues Berry
BMC Neuroscience, 2014, 15 (Suppl 1), P205 (2 p.)
Article dans une revue
hal-01026523
v1
|
|
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Glutamate Mediated Astrocytic Filtering of Neuronal Activity
Gilad Wallach
,
Jules Lallouette
,
Nitzan Herzog
,
Maurizio de Pittà
,
Eshel Ben Jacob
et al.
Article dans une revue
hal-01077738
v2
|
|
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Astrocytic theory of working memory
Maurizio de Pittà
,
Eshel Ben-Jacob
,
Hugues Berry
BMC Neuroscience, 2014, 15 (Suppl 1), P206 (2 p.)
Article dans une revue
hal-01026524
v1
|
|
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Anomalous diffusion due to hindering by mobile obstacles undergoing Brownian motion or Orstein-Ulhenbeck processes
Hugues Berry
,
Hugues Chaté
Article dans une revue
inria-00575651
v2
|
|
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Space-induced bifurcation in repression-based transcriptional circuits
Amanda Lo Van
,
Hédi Soula
,
Hugues Berry
BMC Systems Biology, 2014, 8, 125 (14 p.)
Article dans une revue
hal-01068558
v1
|
|
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Spatial distributions at equilibrium under heterogeneous transient subdiffusion
Hugues Berry
,
Hédi Soula
Article dans une revue
hal-01077735
v1
|
|
|
Comments to the Editor. Reply to the Comment by V.P. Shkilev on "Anomalous versus slowed-down Brownian diffusion in the ligand-binding equilibrium
Hédi Soula
,
Bertrand Caré
,
Guillaume Beslon
,
Hugues Berry
Article dans une revue
hal-00956603
v1
|
|
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Localization of protein aggregation in Escherichia coli is governed by diffusion and nucleoid macromolecular crowding effect
Anne-Sophie Coquel
,
Jean-Pascal Jacob
,
Maël Primet
,
Alice Demarez
,
Mariella Dimiccoli
et al.
Article dans une revue
hal-00798053
v1
|
|
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Effects of Cellular Homeostatic Intrinsic Plasticity on Dynamical and Computational Properties of Biological Recurrent Neural Networks.
Jérémie Naudé
,
Bruno Cessac
,
Hugues Berry
,
Bruno Delord
Article dans une revue
hal-00844218
v1
|
|
|
Anomalous versus slowed-down Brownian diffusion in the ligand-binding equilibrium
Hédi Soula
,
Bertrand Caré
,
Guillaume Beslon
,
Hugues Berry
Article dans une revue
hal-00720515
v3
|
|
|
Computational quest for understanding the role of astrocyte signaling in synaptic transmission and plasticity
Maurizio de Pittà
,
Vladislav Volman
,
Hugues Berry
,
Vladimir Parpura
,
Andrea Volterra
et al.
Article dans une revue
(article de synthèse)
hal-00762313
v2
|
|
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A THEORY of RATE CODING CONTROL by INTRINSIC PLASTICITY EFFECTS
Jérémie Naudé
,
Jeanne T. Paz
,
Hugues Berry
,
Bruno Delord
Article dans une revue
hal-00645336
v1
|
|
|
Large-scale Simulations on FPGAs: Finding the Asymptotic Critical Threshold of the Greenberg-Hastings Cellular Automata
Nikolaos Vlassopoulos
,
Nazim Fatès
,
Hugues Berry
,
Bernard Girau
Journal of Cellular Automata, 2012, 7 (1), pp.5-29
Article dans une revue
hal-00644660
v1
|
|
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École interdisciplinaire d’échanges et de formation en biologie de Berder 2010 : histoire et mémoire en biologie
Elifsu Sabuncu
,
Georgia Barlovatz-Meimon
,
Hugues Berry
Natures Sciences Sociétés, 2011, 19, pp.62-70
Article dans une revue
hal-02883776
v1
|
|
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Robustness of the Critical Behaviour in the Stochastic Greenberg-Hastings Cellular Automaton Model
Hugues Berry
,
Nazim Fatès
International Journal of Unconventional Computing, 2011, 7 (1-2), pp.65-85
Article dans une revue
inria-00598379
v1
|
|
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A tale of two stories: astrocyte regulation of synaptic depression and facilitation
Maurizio de Pittà
,
Vladislav Volman
,
Hugues Berry
,
Eshel Ben-Jacob
Article dans une revue
inria-00633588
v2
|
|
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Dendritic signals command firing dynamics in a mathematical model of cerebellar purkinje cell
Stéphane Genet
,
Loic Sabarly
,
Emmanuel Guigon
,
Hugues Berry
,
Bruno Delord
Article dans une revue
hal-03171536
v1
|
|
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Du chaos dans les neurones
Bruno Cessac
,
Hugues Berry
Interstices, 2010
Article dans une revue
hal-01350194
v1
|
|
|
Dendritic signals command firing dynamics in a mathematical model of cerebellar Purkinje cells.
Stéphane Genet
,
Loïc Sabarly
,
Emmanuel Guigon
,
Hugues Berry
,
Bruno Delord
Article dans une revue
inria-00575654
v1
|
|
|
Nonlinear gap junctions enable long-distance propagation of pulsating calcium waves in astrocyte networks.
Mati Goldberg
,
Maurizio de Pittà
,
Vladislav Volman
,
Hugues Berry
,
Eshel Ben-Jacob
Article dans une revue
inria-00575656
v1
|
|
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Glutamate regulation of calcium and IP3 oscillating and pulsating dynamics in astrocytes.
Maurizio de Pittà
,
Mati Goldberg
,
Vladislav Volman
,
Hugues Berry
,
Eshel Ben-Jacob
Article dans une revue
inria-00575653
v1
|
|
|
Quand les bactéries se mêlent du calcul des ordinateurs
Hugues Berry
,
Joanna Jongwane
Interstices, 2008
Article dans une revue
hal-01350414
v1
|
|
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From Molecules to Organisms: Towards Multiscale Integrated Models of Biological Systems
Christophe Lavelle
,
Hugues Berry
,
Guillaume Beslon
,
Francisco Ginelli
,
Jean-Louis Giavitto
et al.
Theoretical Biology Insights, 2008, 1, pp.13-22
Article dans une revue
inria-00331281
v1
|
|
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Bioinformatique : de la cellule à la puce. Alchimistes de l'informatique, entretien avec Hugues Berry et Olivier Temam, propos recueillis par Dominique Chouchan.
Hugues Berry
,
Olivier Temam
Les Cahiers de l'INRIA - La Recherche, 2008, Homo Erectus Sort D'afrique, 419 mai 2008
Article dans une revue
inria-00546805
v1
|
|
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A mathematical analysis of the effects of Hebbian learning rules on the dynamics and structure of discrete-time random recurrent neural networks.
Benoit Siri
,
Hugues Berry
,
Bruno Cessac
,
Bruno Delord
,
Mathias Quoy
Neural Computation, 2008, 20, pp.2937-2966
Article dans une revue
inria-00633582
v1
|
|
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A new principle for information storage in an enzymatic pathway model.
Bruno Delord
,
Hugues Berry
,
Emmanuel Guigon
,
Stéphane Genet
Article dans une revue
inria-00149083
v1
|
|
|
Modeling Self-Developing Biological Neural Networks
Hugues Berry
,
Olivier Temam
Article dans une revue
inria-00149082
v1
|
|
|
Effects of Hebbian learning on the dynamics and structure of random networks with inhibitory and excitatory neurons.
Benoît Siri
,
Mathias Quoy
,
Bruno Delord
,
Bruno Cessac
,
Hugues Berry
Article dans une revue
inria-00633581
v1
|
|
|
Structure and dynamics of random recurrent neural networks
Hugues Berry
,
Mathias Quoy
Adaptive Behavior, 2006, 14, pp.129-137
Article dans une revue
inria-00001065
v1
|
|
|
A Sampling Method Focusing on Practicality
Daniel Gracia-Perez
,
Hugues Berry
,
Olivier Temam
IEEE Micro, 2006
Article dans une revue
inria-00158808
v2
|
|
|
Chaos in computer performance
Hugues Berry
,
Daniel Gracia Pérez
,
Olivier Temam
Chaos: An Interdisciplinary Journal of Nonlinear Science, 2006, 16 (1), pp.013110. ⟨10.1063/1.2159147⟩
Article dans une revue
inria-00000109
v2
|
|
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Adsorption-induced fibronectin aggregation and fibrillogenesis
Hugues Berry
,
Delphine Pellenc
,
Olivier Gallet
Journal of Colloid and Interface Science, 2006, 298, pp.132-144
Article dans une revue
inria-00001063
v1
|
|
|
Adsorption-induced conformational changes in protein diffusion-aggregation surface assemblies
Hugues Berry
,
Delphine Pellenc
,
Olivier Gallet
Physical Review E : Statistical, Nonlinear, and Soft Matter Physics, 2005, 72, pp.051904
Article dans une revue
inria-00001064
v1
|
|
|
Characterizing Self-Developing Biological Neural Networks: A First Step Towards their Application To Computing Systems
Hugues Berry
,
Olivier Temam
Lecture Notes in Computer Science, 2005, 3512, pp.306-317
Article dans une revue
inria-00000024
v1
|
|
|
Antibiotic resistance and virulence properties of Pseudomonas aeruginosa strains from mechanically ventilated patients with pneumonia in intensive care units: comparison with imipenem-resistant extra-respiratory tract isolates from uninfected patients
Patrick Di Martino
,
Hélène Gagnière
,
Hugues Berry
,
Laurent Bret
Microbes and Infection, 2002, 4 (6), pp.613-620
Article dans une revue
hal-01951134
v1
|