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De novo assembled nuclear, chloroplast, and mitochondrial genomes show high intraspecific variation in the tropical rainforest species Symphonia globulifera
Sanna Olsson
,
Rocío Bautista
,
M Gonzalo Claros
,
Myriam Heuertz
,
Ivan Scotti
Article dans une revue
hal-05291758v1
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Genomic Signatures of Climate‐Driven (Mal)Adaptation in an Iconic Conifer, the English Yew ( <i>Taxus baccata</i> L.)
Thomas Francisco
,
Maria Mayol
,
Elia Vajana
,
Miquel Riba
,
Marjana Westergren
et al.
Article dans une revue
hal-05502553v1
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Beyond proxies: towards ecophysiological indicators of drought resistance for forest management
Alice Copie
,
Caroline Scotti-Saintagne
,
François Lefèvre
,
Hervé Cochard
,
Sylvain Delzon
et al.
Article dans une revue
hal-05283676v1
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Rolling down that mountain: microgeographical adaptive divergence during a fast population expansion along a steep environmental gradient in European beech
Andrea Modica
,
Hadrien Lalagüe
,
Sylvie Muratorio
,
Ivan Scotti
Article dans une revue
hal-04618879v1
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Genomic responses to climate: Understanding local adaptation in the Andean tree species Nothofagus pumilio and implications for a changing world
Jill Sekely
,
Paula Marchelli
,
Verónica Arana
,
Benjamin Dauphin
,
María Gabriela Mattera
et al.
Article dans une revue
hal-04619227v1
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Resilience of genetic diversity in forest trees over the Quaternary
Pascal Milesi
,
Chedly Kastally
,
Benjamin Dauphin
,
Sandra Cervantes
,
Francesca Bagnoli
et al.
Article dans une revue
hal-04746980v1
|
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Population genetic structure and demographic history of the timber tree Dicorynia guianensis in French Guiana
Julien Bonnier
,
Niklas Tysklind
,
Valérie Troispoux
,
Ivan Scotti
,
Stéphanie Barthe
et al.
Article dans une revue
hal-04481636v1
|
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Estimation of contemporary effective population size in plant populations: Limitations of genomic datasets
Roberta Gargiulo
,
Véronique Decroocq
,
Santiago C. Gonzalez-Martinez
,
Ivan Paz‐vinas
,
Jean‐marc Aury
et al.
Article dans une revue
hal-04590931v1
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Common microgeographical selection patterns revealed in four European conifers
Ivan Scotti
,
Hadrien Lalagüe
,
Sylvie Oddou-Muratorio
,
Rose Ruiz Daniels
,
Delphine Grivet
et al.
Article dans une revue
hal-04060643v2
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Fire frequency, as well as stress response and developmental gene control serotiny level variation in a widespread pioneer Mediterranean conifer, Pinus halepensis
Bastien Romero
,
Ivan Scotti
,
Bruno Fady
,
Anne Ganteaume
Article dans une revue
hal-04040337v1
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A 14-year series of leaf phenological data collected for European beech (Fagus sylvatica L.) and silver fir (Abies alba Mill.) from their geographic range margins in south-eastern France
Frederic Jean
,
Hendrik Davi
,
Sylvie Oddou-Muratorio
,
Bruno Fady
,
Ivan Scotti
et al.
Article dans une revue
(data paper)
hal-04230363v1
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Between but Not Within-Species Variation in the Distribution of Fitness Effects
Jennifer James
,
Chedly Kastally
,
Katharina B Budde
,
Santiago C. Gonzalez-Martinez
,
Pascal Milesi
et al.
Article dans une revue
hal-04598142v1
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Diversity and enrichment of breeding material for resilience in European forests
Sanna Olsson
,
Benjamin Dauphin
,
Véronique Jorge
,
Delphine Grivet
,
Anna Maria Farsakoglou
et al.
Article dans une revue
hal-04118477v1
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A Chromosome-level genome assembly of the European Beech (Fagus sylvatica) reveals anomalies for organelle DNA integration, repeat Content and distribution of SNPs
Bagdevi Mishra
,
Bartosz Ulaszewski
,
Joanna Meger
,
Jean-Marc Aury
,
Catherine Bodénès
et al.
Article dans une revue
hal-03602006v1
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Interactions between microenvironment, selection and genetic architecture drive multiscale adaptation in a simulation experiment
Philippe Cubry
,
Sylvie Oddou-Muratorio
,
Ivan Scotti
,
Francois Lefèvre
Article dans une revue
hal-03639980v1
|
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The GenTree Platform: growth traits and tree-level environmental data in 12 European forest tree species
Lars Opgenoorth
,
Benjamin Dauphin
,
Raquel Benavides
,
Katrin Heer
,
Paraskevi Alizoti
et al.
Article dans une revue
(data paper)
hal-03282821v1
|
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Genetic signatures of divergent selection in European beech ( Fagus sylvatica L.) are associated with the variation in temperature and precipitation across its distribution range
Dragos Postolache
,
Sylvie Oddou-Muratorio
,
Elia Vajana
,
Francesca Bagnoli
,
Erwan Guichoux
et al.
Article dans une revue
hal-03338410v1
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Genomic and phenotypic divergence unveil microgeographic adaptation in the Amazonian hyperdominant tree Eperua falcata Aubl. (Fabaceae)
Louise Brousseau
,
Paul V.A. Fine
,
Erwin E. Dreyer
,
Giovanni Vendramin
,
Ivan Scotti
Article dans une revue
hal-02930429v1
|
|
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The GenTree Leaf Collection: Inter‐ and intraspecific leaf variation in seven forest tree species in Europe
Raquel Benavides
,
Bárbara Carvalho
,
Cristina Bastias
,
David López‐quiroga
,
Antonio Mas
et al.
Article dans une revue
(data paper)
hal-03282266v1
|
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Signature of mid‐Pleistocene lineages in the European silver fir ( Abies alba Mill.) at its geographic distribution margin
Caroline Scotti-Saintagne
,
Thomas Boivin
,
Marie Suez
,
Brigitte Musch
,
Ivan Scotti
et al.
Article dans une revue
hal-03318278v1
|
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Microgeographic local adaptation and ecotype distributions: The role of selective processes on early life‐history traits in sympatric, ecologically divergent Symphonia populations
Niklas Tysklind
,
Marie-Pierre Etienne
,
Caroline Scotti-Saintagne
,
Alexandra Tinaut
,
Maxime Casalis
et al.
Article dans une revue
hal-02948828v1
|
|
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Genetic Structure of a Worldwide Germplasm Collection of Prunus armeniaca L. Reveals Three Major Diffusion Routes for Varieties Coming From the Species’ Center of Origin
Hedia Bourguiba
,
Ivan Scotti
,
Christopher Sauvage
,
Tetyana Zhebentyayeva
,
Craig Ledbetter
et al.
Article dans une revue
hal-03169080v1
|
|
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Discrepancies between genetic and ecological divergence patterns suggest a complex biogeographic history in a Neotropical genus
Giorgio Binelli
,
William Montaigne
,
Daniel Sabatier
,
Caroline Scotti-Saintagne
,
Ivan Scotti
Article dans une revue
hal-02539604v1
|
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La science forestière face au changement climatique
Caroline Scotti-Saintagne
,
Ivan Scotti
Garance Voyageuse, 2020, 128, pp.30-33
Article dans une revue
hal-02473705v1
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Recent, Late Pleistocene fragmentation shaped the phylogeographic structure of the European black pine (Pinus nigra Arnold)
Caroline Scotti-Saintagne
,
Guia Giovannelli
,
Ivan Scotti
,
Anne Roig
,
Ilaria Spanu
et al.
Article dans une revue
hal-02465935v1
|
|
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Science needs management data for a better prediction of climate change effects on socio-ecosystems
Bruno Fady
,
Thomas Geburek
,
Ivan Scotti
Article dans une revue
hal-02464110v1
|
|
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Chloroplast DNA variation in a hyperdiverse tropical tree community
Henri Caron
,
Jean‐françois Molino
,
Daniel Sabatier
,
Patrick Léger
,
Philippe Chaumeil
et al.
Article dans une revue
hal-02108230v1
|
|
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Genetic Variation and Differentiation of Hylesia metabus (Lepidoptera: Saturniidae): Moths of Public Health Importance in French Guiana and in Venezuela.
Marina Ciminera
,
Marie-Anne Auger-Rozenberg
,
Henri Caron
,
Melfran Herrera
,
Caroline Scotti-Saintagne
et al.
Article dans une revue
hal-02627413v1
|
|
|
Pour l'environnement et la forêt, le temps de l'expérimentation
Bruno Fady
,
Ivan Scotti
Forêt Entreprise, 2018, 240, pp.62-63
Article dans une revue
hal-02619193v1
|
|
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The Missing Response to Selection in the Wild
Benoit Pujol
,
Simon Blanchet
,
Anne Charmantier
,
Etienne Danchin
,
Benoit Facon
et al.
Article dans une revue
hal-02161757v1
|
|
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Generalization of the Q(ST) framework in hierarchically structured populations: Impacts of inbreeding and dominance
Philippe Cubry
,
Ivan Scotti
,
Sylvie Muratorio
,
Francois Lefèvre
Article dans une revue
hal-01576329v1
|
|
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Development of genomic tools in a widespread tropical tree, Symphonia globulifera L.f.: a new low-coverage draft genome, SNP and SSR markers
Sanna Olsson
,
Pedro Seoane Zonjic
,
Rocío Bautista
,
M. Gonzalo Claros
,
Santiago Gonzalez Martinez
et al.
Article dans une revue
hal-01512127v1
|
|
|
Forest tree genomics: 10 achievements from the past 10 years and future prospects
Christophe Plomion
,
Catherine Bastien
,
Marie-Béatrice Bogeat-Triboulot
,
Laurent Bouffier
,
Annabelle Déjardin
et al.
Article dans une revue
(article de synthèse)
hal-01330031v1
|
|
|
Il viaggio delle piante
Ivan Scotti
Focus, 2016, 281 (Mars 2016), pp.32-37
Article dans une revue
hal-01350494v1
|
|
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Fifty years of genetic studies: what to make of the large amounts of variation found within populations?
Ivan Scotti
,
Santiago C. González-Martínez
,
Katharina B. Budde
,
Hadrien Lalagüe
Article dans une revue
hal-01290976v1
|
|
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Tropical rainforests that persisted: inferences from the Quaternary demographic history of eight tree species in the Guiana shield
Stéphanie Barthe
,
Giorgio Binelli
,
Bruno Hérault
,
Caroline Scotti-Saintagne
,
Daniel Sabatier
et al.
Article dans une revue
hal-01512150v1
|
|
|
Réchauffement climatique : peut-on sauver nos forêts ?
Ivan Scotti
La Recherche, 2015, 503, pp.48-52
Article dans une revue
(article de synthèse)
hal-01350495v1
|
|
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Neutral and adaptive drivers of microgeographic genetic divergence within continuous populations: The case of the neotropical tree Eperua falcata (Aubl.)
Louise Brousseau
,
Matthieu Foll
,
Caroline Scotti-Saintagne
,
Ivan Scotti
Article dans une revue
hal-01204220v1
|
|
|
Life after disturbance (II): the intermediate disturbance hypothesis explains genetic variation in forest gaps dominated by Virola michelii Heckel (Myristicaceae)
Ivan Scotti
,
William Montaigne
,
Klára Cseke
,
Stephane Traissac
Article dans une revue
hal-01502942v1
|
|
|
Life after disturbance (I): changes in the spatial genetic structure of Jacaranda copaia (Aubl.) D. Don (Bignonianceae) after logging in an intensively studied plot in French Guiana
Thomas Leclerc
,
Ruppert Vimal
,
Valérie Troispoux
,
Sophie Périgon
,
Ivan Scotti
Article dans une revue
hal-02456261v1
|
|
|
Life after disturbance (I): changes in the spatial genetic structure of Jacaranda copaia (Aubl.) D. Don (Bignonianceae) after logging in an intensively studied plot in French Guiana
Thomas Leclerc
,
Ruppert Vimal
,
Valérie Troispoux
,
Sophie Périgon
,
Ivan Scotti
Article dans une revue
hal-01284198v1
|
|
|
L'adaptation des forêts passe par la génétique
Ivan Scotti
Les Echos, 2015, 23 février 2015
Article dans une revue
hal-01349820v1
|
|
|
High-throughput transcriptome sequencing and preliminary functional analysis in four Neotropical tree species
Louise Brousseau
,
Alexandra Tinaut
,
Caroline Duret
,
Tiange Lang
,
Pauline Garnier‐géré
et al.
Article dans une revue
hal-01032439v1
|
|
|
Generalization of the Partitioning of Shannon Diversity
Eric Marcon
,
Ivan Scotti
,
Bruno Hérault
,
Vivien Rossi
,
Gabriel Lang
Article dans une revue
hal-01189953v1
|
|
|
Molecular divergence in tropical tree populations occupying environmental mosaics
Delphine Audigeos
,
Louise Brousseau
,
Stephane Traissac
,
Caroline Scotti-Saintagne
,
Ivan Scotti
Article dans une revue
hal-01032412v1
|
|
|
Highly local environmental variability promotes intrapopulation divergence of quantitative traits: an example from tropical rain forest trees
Louise Brousseau
,
Damien Bonal
,
Jeremy Cigna
,
Ivan Scotti
Article dans une revue
hal-01032430v1
|
|
|
RaBoT: a rarefaction-by-bootstrap method to compare genome-wide levels of genetic diversity
Ivan Scotti
,
William Montaigne
,
Klara Cseke
,
Stephane Traissac
Article dans une revue
hal-01032413v1
|
|
|
Amazon diversification and cross-Andean dispersal of the widespread Neotropical tree species Jacaranda copaia (Bignoniaceae)
Caroline Scotti-Saintagne
,
Christopher W. Dick
,
Henri Caron
,
Giovanni G. Vendramin
,
Valérie Troispoux
et al.
Article dans une revue
hal-01032410v1
|
|
|
Phylogeography of a species complex of lowland Neotropical rain forest trees (Carapa, Meliaceae)
Caroline Scotti-Saintagne
,
Christopher W. Dick
,
Henri Caron
,
Giovanni G. Vendramin
,
Erwan Guichoux
et al.
Article dans une revue
hal-01032395v1
|
|
|
Always look on both sides: phylogenetic information conveyed by simple sequence repeat allele sequences
Stephanie Barthe
,
Felix Gugerli
,
Noelle A. Barkley
,
Laurent Maggia
,
Celine Cardi
et al.
Article dans une revue
hal-01190764v1
|
|
|
The interplay of dispersal limitation, rivers, and historical events shapes the genetic structure of an Amazonian frog
Antoine Fouquet
,
Jean-Baptiste Ledoux
,
Vincent Dubut
,
Brice P. Noonan
,
Ivan Scotti
Article dans une revue
hal-01032422v1
|
|
|
Isolation of primers for candidate genes for mechano-sensing in five Neotropical tree species
Malia Chevolot
,
Eliane Louisanna
,
Wassim Azri
,
Nathalie Fournier-Leblanc
,
Patricia P. Roeckel-Drevet
et al.
Article dans une revue
istex
hal-01019738v1
|
|
|
Promoting the promoter
Vincent Vedel
,
Ivan Scotti
Article dans une revue
istex
hal-01032399v1
|
|
|
Adaptive potential in forest tree populations: what is it, and how can we measure it?
Ivan Scotti
Article dans une revue
hal-00883652v1
|
|
|
The genomic architecture of sexual dimorphism in the dioecious plant Silene latifolia
Lynda Delph
,
Michele Arntz
,
Caroline Scotti-Saintagne
,
Ivan Scotti
Article dans une revue
istex
hal-01032136v1
|
|
|
Aquaporins in the wild: natural genetic diversity and selective pressure in the PIP gene family in five neotropical tree species
Delphine Audigeos
,
Anna Buonamici
,
Laurent Belkadi
,
Paul Rymer
,
David Boshier
et al.
Article dans une revue
hal-01032078v1
|
|
|
Mechanosensing of stem bending and its interspecific variability in five neotropical rainforest species
Catherine Coutand
,
Malia Chevolot
,
Nick P Rowe
,
André Lacointe
,
Ivan Scotti
Article dans une revue
halsde-00454145v1
|
|
|
Genetic variation for growth, morphological, and physiological traits in a wild population of the Neotropical shade-tolerant rainforest tree Sextonia rubra (Mez) van der Werff (Lauraceae)
Ivan Scotti
,
Leticia Calvo-Vialettes
,
Caroline Scotti-Saintagne
,
Maurizio Citterio
,
Bernd Degen
et al.
Article dans une revue
istex
hal-01032145v1
|
|
|
Genomic patterns of adaptive divergence between chromosomally differentiated sunflower species
Jared L Strasburg
,
Caroline Scotti-Saintagne
,
Ivan Scotti
,
Zhao Lai
,
Loren H. Rieseberg
Article dans une revue
hal-01032153v1
|
|
|
Isolation and characterisation of 19 microsatellite loci from the Amazonian frog Adenomera andreae (Amplibia: anura: Leptodactylidae)
Antoine Fouquet
,
Vincent Dubut
,
Robert Hataway
,
Caroline Scotti-Saintagne
,
Ivan Scotti
et al.
Article dans une revue
hal-01032133v1
|
|
|
Spontaneous gene flow and population structure in wild and cultivated chicory, Cichorium intybus L.
L.P. Kiaer
,
F. Felber
,
A. Flavell
,
R. Guadagnuolo
,
D. Guiatti
et al.
Article dans une revue
istex
hal-01032184v1
|
|
|
Genetically depauperate but widespread: the case of an emblematic mediterranean pine
Giovanni G. Vendramin
,
Bruno Fady
,
Santiago C. Gonzalez-Martinez
,
Feng Sheng Hu
,
Ivan Scotti
et al.
Article dans une revue
hal-01032062v1
|
|
|
Maternally and paternally inherited molecular markers elucidate population patterns and inferred dispersal processes on a small scale within a subalpine stand of Norway spruce (Picea abies [L.] Karst.)
Ivan Scotti
,
Félix Gugerli
,
Roberta Pastorelli
,
Federico Sebastiani
,
Giovanni Vendramin
Article dans une revue
istex
hal-01032063v1
|
|
|
Population genetics of Norway spruce (Picea abies Karst.) at regional scale: sensitivity of different microsatellite motif classes in detecting differentiation
Ivan Scotti
,
Gianpaolo Paglia
,
Federica Magni
,
Michele Morgante
Article dans une revue
hal-01032048v1
|
|
|
Selective trade-offs and sex-chromosome evolution in silene latifolia
Ivan Scotti
,
Lynda Delph
Evolution - International Journal of Organic Evolution, 2006, 60 (9), pp.1793-1800
Article dans une revue
hal-01032044v1
|
|
|
Blind population genetics survey of tropical rainforest trees
Jérôme Duminil
,
Henri Caron
,
Ivan Scotti
,
Saint-Omer Cazal
,
Remy Petit
Article dans une revue
istex
hal-01031226v1
|
|
|
Population genetics of Norway spruce (Picea abies Karst.) at regional scale: sensitivity of different microsatellite motif classes in detecting differentiation
Ivan Scotti
,
Gianpaolo Paglia
,
Federica Magni
,
Michele Morgante
Annals of Forest Science, 2006, 63 (5), pp.485-491
Article dans une revue
hal-00884000v1
|
|
|
Analysis of the distribution of markers classes in a genetic linkage map:a case study in Norway spruce (Picea abies karst)
Ivan Scotti
,
Andrea Burelli
,
Federica Cattonaro
,
David Chagné
,
John Fuller
et al.
Article dans une revue
istex
hal-01032033v1
|
|
|
Inheritance and diversity of simple sequence repeat (SSR) microsatellite markers in various families of <em>Picea abies</em>
R. Yazdani
,
Ivan Scotti
,
G. Jansson
,
Christophe Plomion
,
G. Mathur
Article dans une revue
istex
hal-02681555v1
|
|
|
AFPL markers and cytotaxonomic analysis reveal hybridisation in the genus Schoenus (Cyperaceae)
Ivan Scotti
,
Anna Mariani
,
Valentino Verona
,
Alberto Candolini
,
Carlo Cenci
et al.
Article dans une revue
hal-01032047v1
|
|
|
Efficient development of dinucleotide microsatellite markers in Norway spruce (Picea abies Karst.) through dot blot selection
Ivan Scotti
,
Gianpaolo Paglia
,
Federica Magni
,
Michele Morgante
Article dans une revue
istex
hal-01031865v1
|
|
|
Trinucleotide microsatellites in Norway spruce (Picea abies): their features and the development of molecular markers
Ivan Scotti
,
Federica Magni
,
Gianpaolo Paglia
,
Michèle Morgante
Article dans une revue
istex
hal-01032029v1
|
|
|
Postglacial recolonization routes for Picea abies K. in Italy as suggested by the analysis of sequence-characterized amplified region (SCAR) markers
Ivan Scotti
,
G. Vendramin
,
L. Matteotti
,
C. Scarponi
,
M. Sari-Gorla
et al.
Article dans une revue
istex
hal-01031243v1
|
|
|
Microsatellite repeats are not randomly distributed within Norway spruce(Picea abies K.) expressed sequences
Ivan Scotti
,
F. Magni
,
R. Fink
,
G. Binelli
,
W. Powell
et al.
Genome, 2000, 43, pp.41-46
Article dans une revue
hal-01032034v1
|