J. Mark Cock

201
Documents

Publications

Publications

Multiple, diverse endogenous giant virus elements within the genome of a brown alga

Dean Mckeown , Alexandre Cormier , Declan C Schroeder , Arnaud Couloux , Nachida Tadrent et al.
Virus Evolution, 2025, 11 (1), ⟨10.1093/ve/veaf009⟩
Article dans une revue hal-04997831 v1
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18S and ITS2 rRNA gene sequence-structure phylogeny of the Phaeophyceae (SAR, Stramenopiles) with special reference to Laminariales

Leon Berchtenbreiter , Abdullah Emir Mumcu , Antonia Stephanie Rackevei , J. Mark Cock , Hiroshi Kawai et al.
European Journal of Protistology, 2024, 95, pp.126107. ⟨10.1016/j.ejop.2024.126107⟩
Article dans une revue hal-04654945 v1
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Evolutionary genomics of the emergence of brown algae as key components of coastal ecosystems

France Denoeud , Olivier Godfroy , Corinne Cruaud , Svenja Heesch , Zofia Nehr et al.
Cell, In press, 187 (24), pp.6943-+. ⟨10.1016/j.cell.2024.10.049⟩
Article dans une revue hal-04794231 v1

Evolutionary genomics of the emergence of brown algae as key components of coastal ecosystems

France Denoeud , Olivier Godfroy , Corinne Cruaud , Svenja Heesch , Zofia Nehr et al.
Cell, 2024, 187 (24), pp.6943-6965.e39. ⟨10.1016/j.cell.2024.10.049⟩
Article dans une revue hal-05027497 v1
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Candidate genes involved in biosynthesis and degradation of the main extracellular matrix polysaccharides of brown algae and their probable evolutionary history

Lisa Mazéas , Ahlem Bouguerba-Collin , J. Mark Cock , France Denoeud , Olivier Godfroy et al.
BMC Genomics, 2024, 25 (1), pp.950. ⟨10.1186/s12864-024-10811-3⟩
Article dans une revue hal-04734202 v1
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THE MODEL SYSTEM ECTOCARPUS: INTEGRATING FUNCTIONAL GENOMICS INTO BROWN ALGAL RESEARCH

J. Mark Cock
Journal of Phycology, 2023, ⟨10.1111/jpy.13310⟩
Article dans une revue (article de synthèse) hal-03896148 v1
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The baseless mutant links protein phosphatase 2A with basal cell identity in the brown alga Ectocarpus

Olivier Godfroy , Min Zheng , Haiqin Yao , Agnes Henschen , Akira Peters et al.
Development (Cambridge, England), 2023, 150 (4), ⟨10.1242/dev.201283⟩
Article dans une revue hal-03990893 v1
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An Efficient Chromatin Immunoprecipitation Protocol for the Analysis of Histone Modification Distributions in the Brown Alga Ectocarpus

Simon Bourdareau , Olivier Godfroy , Josselin Gueno , Delphine Scornet , Susana Coelho et al.
Methods and Protocols, 2022, 5 (3), pp.36. ⟨10.3390/mps5030036⟩
Article dans une revue hal-03658367 v1
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Selection drives convergent gene expression changes during transitions to co-sexuality in haploid sexual systems

Guillaume Cossard , Olivier Godfroy , Zofia Nehr , Corinne Cruaud , J. Mark Cock et al.
Nature Ecology & Evolution, 2022, 6, pp.579-589. ⟨10.1038/s41559-022-01692-4⟩
Article dans une revue hal-03619076 v1
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Providing a phylogenetic framework for trait-based analyses in brown algae: Phylogenomic tree inferred from 32 nuclear protein-coding sequences

Shingo Akita , Christophe Vieira , Takeaki Hanyuda , Florence Rousseau , Corinne Cruaud et al.
Molecular Phylogenetics and Evolution, 2022, 168, pp.107408. ⟨10.1016/j.ympev.2022.107408⟩
Article dans une revue hal-03553061 v1
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Chromatin landscape associated with sexual differentiation in a UV sex determination system

Josselin Gueno , Michael Borg , Simon Bourdareau , Guillaume Cossard , Olivier Godfroy et al.
Nucleic Acids Research, 2022, 50 (6), pp.3307-3322. ⟨10.1093/nar/gkac145⟩
Article dans une revue hal-03608518 v1
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Evolution of life cycles and reproductive traits: insights from the brown algae

Svenja Heesch , Martha Serrano‐serrano , Josué Barrera‐redondo , Rémy Luthringer , Akira F Peters et al.
Journal of Evolutionary Biology, 2021, ⟨10.1111/jeb.13880⟩
Article dans une revue hal-03254135 v1
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Exploring, harnessing and conserving marine genetic resources towards a sustainable seaweed aquaculture

Yacine Badis , Delphine Scornet , Minori Harada , Céline Caillard , Olivier Godfroy et al.
Plants, People, Planet, 2021, 3 (4), pp.337-349. ⟨10.1002/ppp3.10190⟩
Article dans une revue mnhn-03437699 v1
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Histone modifications during the life cycle of the brown alga Ectocarpus

Simon Bourdareau , Leila Tirichine , Damarys Loew , Delphine Scornet , Yue Wu et al.
Genome Biology, 2021, 22 (12), ⟨10.1186/s13059-020-02216-8⟩
Article dans une revue hal-03084385 v1
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Signatures of Transcription Factor Evolution and the Secondary Gain of Red Algae Complexity

Romy Petroll , Mona Schreiber , Hermann Finke , J. Mark Cock , Sven B. Gould et al.
Genes, 2021, 12 (7), pp.1055. ⟨10.3390/genes12071055⟩
Article dans une revue hal-03285072 v1
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Targeted CRISPR‐Cas9‐based gene knockouts in the model brown alga Ectocarpus

Yacine Badis , Delphine Scornet , Minori Harada , Céline Caillard , Olivier Godfroy et al.
New Phytologist, 2021, 231 (5), pp.2077-2091. ⟨10.1111/nph.17525⟩
Article dans une revue hal-03356727 v1
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Evolution of Multicellularity

J. Mark Cock
Genes, 2021, 12 (10), pp.1532. ⟨10.3390/genes12101532⟩
Article dans une revue hal-03358993 v1
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A partially sex‐reversed giant kelp sheds light into the mechanisms of sexual differentiation in a UV sexual system

Dieter G Müller , Enora Gaschet , Olivier Godfroy , Josselin Gueno , Guillaume Cossard et al.
New Phytologist, 2021, ⟨10.1111/nph.17582⟩
Article dans une revue hal-03274489 v1
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BIOCHEMICAL CHARACTERISTICS OF A DIFFUSIBLE FACTOR THAT INDUCES GAMETOPHYTE TO SPOROPHYTE SWITCHING IN THE BROWN ALGA ECTOCARPUS

Haiqin Yao , Delphine Scornet , Murielle Jam , Cécile Hervé , Philippe Potin et al.
Journal of Phycology, 2021, 57 (3), pp.742-753. ⟨10.1111/jpy.13126⟩
Article dans une revue hal-03089431 v1
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Priming of Marine Macrophytes for Enhanced Restoration Success and Food Security in Future Oceans

Alexander Jueterbock , Antoine J P Minne , J. Mark Cock , Melinda A Coleman , Thomas Wernberg et al.
Frontiers in Marine Science, 2021, 8, ⟨10.3389/fmars.2021.658485⟩
Article dans une revue hal-03199094 v1
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Role and Evolution of the Extracellular Matrix in the Acquisition of Complex Multicellularity in Eukaryotes: A Macroalgal Perspective

Bernard Kloareg , Yacine Badis , J. Mark Cock , Gurvan Michel
Genes, 2021, 12 (7), pp.1059. ⟨10.3390/genes12071059⟩
Article dans une revue hal-03286803 v1
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Cytokinin and Ethylene Cell Signaling Pathways from Prokaryotes to Eukaryotes

Baptiste Bidon , Samar Kabbara , Vincent Courdavault , Gaëlle Glévarec , Audrey Oudin et al.
Cells, 2020, 9 (11), pp.2526. ⟨10.3390/cells9112526⟩
Article dans une revue (article de synthèse) hal-03019153 v1
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Organelle inheritance and genome architecture variation in isogamous brown algae

Ji Won Choi , Louis Graf , Akira F Peters , J. Mark Cock , Koki Nishitsuji et al.
Scientific Reports, 2020, 10 (1), ⟨10.1038/s41598-020-58817-7⟩
Article dans une revue hal-02935623 v1
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instaGRAAL: chromosome-level quality scaffolding of genomes using a proximity ligation-based scaffolder

Lyam Baudry , Nadège Guiglielmoni , Hervé Marie-Nelly , Alexandre Cormier , Komlan Avia et al.
Genome Biology, 2020, 21 (1), ⟨10.1186/s13059-020-02041-z⟩
Article dans une revue pasteur-02873422 v1
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Parallelisable non-invasive biomass, fitness and growth measurement of macroalgae and other protists with nephelometry

Benoît Calmes , Martina Strittmatter , Bertrand Jacquemin , Marie-Mathilde Perrineau , Céline Rousseau et al.
Algal Research - Biomass, Biofuels and Bioproducts, 2020, 46, pp.101762. ⟨10.1016/j.algal.2019.101762⟩
Article dans une revue hal-02462340 v1
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Production and Bioassay of a Diffusible Factor That Induces Gametophyte-to-Sporophyte Developmental Reprogramming in the Brown Alga Ectocarpus

Haiqin Yao , Delphine Scornet , Yacine Badis , Akira F Peters , Murielle Jam et al.
Bio-protocol , 2020, 10, ⟨10.21769/bioprotoc.3753⟩
Article dans une revue hal-02995785 v1
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Brown Algal Model Organisms

Susana M. Coelho , J. Mark Cock
Annual Review of Genetics, 2020, 54, pp.71-92. ⟨10.1146/annurev-genet-030620-093031⟩
Article dans une revue hal-03082916 v1
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Phylogeny and Evolution of the Brown Algae

Trevor T Bringloe , Samuel Starko , Rachael M Wade , Christophe Vieira , Hiroshi Kawai et al.
Critical Reviews in Plant Sciences, 2020, 39, pp.281 - 321. ⟨10.1080/07352689.2020.1787679⟩
Article dans une revue hal-02995644 v1
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Ectocarpus: an evo-devo model for the brown algae

Susana M Coelho , Akira F Peters , Dieter Müller , J. Mark Cock
EvoDevo, 2020, 11 (1), ⟨10.1186/s13227-020-00164-9⟩
Article dans une revue hal-02935769 v1
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Diversity and Evolution of Sensor Histidine Kinases in Eukaryotes

Samar Kabbara , Anais Herivaux , Thomas Dugé de Bernonville , Vincent Courdavault , Marc Clastre et al.
Genome Biology and Evolution, 2019, 11 (1), pp.86-108. ⟨10.1093/gbe/evy213⟩
Article dans une revue hal-02098285 v1
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Rapid turnover of life-cycle-related genes in the brown algae

A. P Lipinska , M. L Serrano-Serrano , A. Cormier , A. F. Peters , K. Kogame et al.
Genome Biology, 2019, 20, pp.35. ⟨10.1186/s13059-019-1630-6⟩
Article dans une revue hal-02046119 v1
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A key role for sex chromosomes in the regulation of parthenogenesis in the brown alga Ectocarpus

Laure Mignerot , Komlan Avia , Remy Luthringer , Agnieszka Lipinska , Akira F Peters et al.
PLoS Genetics, 2019, 15 (6), pp.e1008211. ⟨10.1371/journal.pgen.1008211⟩
Article dans une revue hal-02170844 v1
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Megaviruses: an involvement in phytohormone receptor gene transfer in brown algae?

Samar Kabbara , Baptiste Bidon , Jaafar Kilani , Thomas Duge de Bernonville , Marc Clastre et al.
Gene, 2019, 704, pp.149-151. ⟨10.1016/j.gene.2019.04.055⟩
Article dans une revue hal-02137038 v1
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Origin and evolution of sex‐determination systems in the brown algae

Susana Coelho , Laure Mignerot , J. Mark Cock
New Phytologist, 2019, 222 (4), pp.1751-1756. ⟨10.1111/nph.15694⟩
Article dans une revue hal-02137076 v1
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Unusual Patterns of Mitochondrial Inheritance in the Brown Alga Ectocarpus

Laure Mignerot , Chikako Nagasato , Akira F Peters , Marie-Mathilde Perrineau , Delphine Scornet et al.
Molecular Biology and Evolution, 2019, ⟨10.1093/molbev/msz186⟩
Article dans une revue hal-02269449 v1
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Convergent recruitment of TALE homeodomain life cycle regulators to direct sporophyte development in land plants and brown algae

Alok Arun , Susana Coelho , Akira F Peters , Simon Bourdareau , Laurent Pérès et al.
Article dans une revue hal-02042404 v1
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UV Chromosomes and Haploid Sexual Systems

Susana Margarida Coelho , Josselin Gueno , Agnieszka Paulina Lipinska , Jeremy Mark Cock , James G Umen
Trends in Plant Science, 2018, 23 (9), pp.794 - 807. ⟨10.1016/j.tplants.2018.06.005⟩
Article dans une revue hal-02995679 v1
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DISTAG/TBCCd1 Is Required for Basal Cell Fate Determination in Ectocarpus

Olivier Godfroy , Toshiki Uji , Chikako Nagasato , Agnieszka Lipinska , Delphine Scornet et al.
The Plant cell, 2018, 29 (12), pp.3102-3122. ⟨10.1105/tpc.17.00440⟩
Article dans une revue hal-03145763 v1
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Genetic Diversity in the UV Sex Chromosomes of the Brown Alga Ectocarpus

Komlan Avia , Agnieszka P Lipinska , Laure Mignerot , Alejandro Montecinos , Mahwash Jamy et al.
Genes, 2018, 9 (6), pp.286. ⟨10.3390/genes9060286⟩
Article dans une revue hal-03145778 v1
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Re-annotation, improved large-scale assembly and establishment of a catalogue of noncoding loci for the genome of the model brown alga Ectocarpus

Alexandre Cormier , Komlan Avia , Lieven Sterck , Thomas Derrien , Valentin Wucher et al.
New Phytologist, 2017, 214 (1), pp.219-232. ⟨10.1111/nph.14321⟩
Article dans une revue hal-03145812 v1
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Multiple gene movements into and out of haploid sex chromosomes

Agnieszka Lipinska , Nicholas R T Toda , Svenja Heesch , Akira F Peters , J. Mark Cock et al.
Genome Biology, 2017, 18, pp.104. ⟨10.1186/s13059-017-1201-7⟩
Article dans une revue hal-01806388 v1
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The Ectocarpus IMMEDIATE UPRIGHT gene encodes a member of a novel family of cysteine-rich proteins that have an unusual distribution across the eukaryotes

Nicolas Macaisne , Fuli Liu , Delphine Scornet , Akira F. Peters , Agnieszka Lipinska et al.
Development (Cambridge, England), 2017, ⟨10.1242/dev.141523⟩
Article dans une revue hal-01436640 v1
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High-density genetic map and identification of QTLs for responses to temperature and salinity stresses in the model brown alga Ectocarpus

Komlan Avia , Susana Coelho , Gabriel J Montecinos , Alexandre Cormier , Fiona Lerck et al.
Scientific Reports, 2017, 7 (1), pp.43241. ⟨10.1038/srep43241⟩
Article dans une revue hal-03145860 v1
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Rapid Evolution of microRNA Loci in the Brown Algae

J. Mark Cock , Fuli Liu , Delin Duan , Simon Bourdareau , Agnieszka P. Lipinska et al.
Genome Biology and Evolution, 2017, 9 (3), pp.740 - 749. ⟨10.1093/gbe/evx038⟩
Article dans une revue hal-01502456 v1

The Algal Revolution

Juliet Brodie , Cheong Xin Chan , Olivier de Clerck , J. Mark Cock , Susana Coelho et al.
Trends in Plant Science, 2017, 22 (8), pp.726-738. ⟨10.1016/j.tplants.2017.05.005⟩
Article dans une revue hal-01806394 v1
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Biotic interactions as drivers of algal origin and evolution

Juliet Brodie , Steven Ball , François-Yves Bouget , Cheong Xin Chan , Olivier de Clerck et al.
New Phytologist, 2017, 216 (3), pp.670-681. ⟨10.1111/nph.14760⟩
Article dans une revue (article de synthèse) hal-01806393 v1
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Characterization of newly developed expressed sequence tag-derived microsatellite markers revealed low genetic diversity within and low connectivity between European Saccharina latissima populations

Jaromir Guzinski , Stéphane Mauger , J. Mark Cock , Myriam Valero
Journal of Applied Phycology, 2016, 28 (5), pp.3057-3070. ⟨10.1007/s10811-016-0806-7⟩
Article dans une revue hal-01297556 v1
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The Ectocarpus IMMEDIATE UPRIGHT gene encodes a member of a novel 1 family of cysteine-rich proteins that have an unusual distribution across the eukaryotes

Nicolas N. Macaisne , Fuli Liu , Delphine Scornet , Akira F Peters , Agnieszka Lipinska et al.
Development, 2016, 144, pp.409-418. ⟨10.1242/dev.141523⟩
Article dans une revue hal-01925145 v1
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Sexual Dimorphism and the Evolution of Sex-Biased Gene Expression in the Brown Alga Ectocarpus

Agnieszka Lipinska , Alexandre Cormier , Remy Luthringer , Akira F Peters , Erwan Corre et al.
Molecular Biology and Evolution, 2015, 32 (6), pp.1581-1597. ⟨10.1093/molbev/msv049⟩
Article dans une revue hal-01285048 v1
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Development of PCR‐Based Markers to Determine the Sex of Kelps

Agnieszka Lipinska , Sophia Ahmed , Akira F Peters , Sylvain Faugeron , J. Mark Cock et al.
PLoS ONE, 2015, 10 (10), pp.e0140535. ⟨10.1371/journal.pone.0140535⟩
Article dans une revue hal-01226462 v1
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The Pseudoautosomal Regions of the U/V Sex Chromosomes of the Brown Alga Ectocarpus Exhibit Unusual Features

Remy Luthringer , Agnieszka P. Lipinska , Denis Roze , Alexandre Cormier , Nicolas Macaisne et al.
Molecular Biology and Evolution, 2015, 32 (11), pp.2973-2985. ⟨10.1093/molbev/msv173⟩
Article dans une revue hal-01806430 v1
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Evolution and maintenance of haploid-diploid life cycles in natural populations: the case of the marine brown alga Ectocarpus

Lucia Couceiro , Mickael Le Gac , Heather M. Hunsperger , Stéphane Mauger , Christophe Destombe et al.
Evolution - International Journal of Organic Evolution, 2015, 69 (7), pp.1808-1822. ⟨10.1111/evo.12702⟩
Article dans une revue hal-01167462 v1
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microRNAs and the evolution of complex multicellularity: identification of a large, diverse complement of microRNAs in the brown alga Ectocarpus

James E. Tarver , Alexandre Cormier , Natalia Pinzón , Richard S. Taylor , Wilfrid Carré et al.
Nucleic Acids Research, 2015, 43 (13), pp.6384-6398. ⟨10.1093/nar/gkv578⟩
Article dans une revue hal-01278012 v1
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Genome-wide comparison of ultraviolet and ethyl methanesulphonate mutagenesis methods for the brown alga Ectocarpus

Olivier Godfroy , Akira F. Peters , Susana M. Coelho , J. Mark Cock
Marine Genomics, 2015, 24 (Part 1), pp.109-113. ⟨10.1016/j.margen.2015.03.007⟩
Article dans une revue hal-01142006 v1
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A Haploid System of Sex Determination in the Brown Alga Ectocarpus sp.

Sophia S. Ahmed , J. Mark Cock , Eugenie Pessia , Remy Luthringer , Alexandre Cormier et al.
Current Biology, 2014, 24 (17), pp.1945-1957. ⟨10.1016/j.cub.2014.07.042⟩
Article dans une revue hal-01132642 v1

Production and Emission of Volatile Compounds by Petal Cells

Sylvie Baudino , Jean-Claude Caissard , Véronique Bergougnoux , Frédéric Jullien , Jean-Louis Magnard et al.
Plant Signaling and Behavior, 2014, 2 (6), pp.525-526. ⟨10.4161/psb.2.6.4659⟩
Article dans une revue hal-04735823 v1

Sexual dimorphism in the brown algae.

Rémy Luthringer , Alexandre Cormier , Sophia Ahmed , Akira F Peters , J. Mark Cock et al.
Perspectives in Phycology, 2014, 1, pp.11-25
Article dans une revue hal-04668502 v1
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Proteomics analysis of heterogeneous flagella in brown algae (stramenopiles).

Gang Fu , Chikako Nagasato , Seiko Oka , J Mark Cock , Taizo Motomura
Protist, 2014, 165 (5), pp.662-75
Article dans une revue hal-01113862 v1

Sexual dimorphism in the brown algae

R. Luthringer , A. Cormier , S. Ahmed , A. F. Peters , J. Mark Cock et al.
Perspectives in Phycology, 2014, 1 (1), pp.11-25. ⟨10.1127/2198-011X/2014/0002⟩
Article dans une revue hal-01806431 v1
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Evolution and regulation of complex life cycles: a brown algal perspective

J Mark Cock , Olivier Godfroy , Nicolas N. Macaisne , Akira F Peters , Susana Coelho
Current Opinion in Plant Biology, 2014, 17, pp.1-6. ⟨10.1016/j.pbi.2013.09.004⟩
Article dans une revue hal-01806434 v1
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GENE SILENCING IN FUCUS EMBRYOS: DEVELOPMENTAL CONSEQUENCES OF RNAi-MEDIATED CYTOSKELETAL DISRUPTION

Garry Farnham , Martina Strittmatter , Susana Coelho , J. Mark Cock , Colin Brownlee
Journal of Phycology, 2013, 49 (5), pp.819-829. ⟨10.1111/jpy.12096⟩
Article dans une revue istex hal-01806438 v1
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Pan genome of the phytoplankton Emiliania underpins its global distribution

Betsy A Read , Jessica Kegel , Mary J Klute , Alan Kuo , Stephane C Lefebvre et al.
Nature, 2013, 499 (7457), pp.209-213. ⟨10.1038/nature12221⟩
Article dans une revue hal-01074841 v1
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Non-cell autonomous regulation of life cycle transitions in the model brown alga Ectocarpus.

Alok Arun , Nick T Peters , Delphine Scornet , Akira F Peters , J. Mark Cock et al.
New Phytologist, 2013, 197 (2), pp.503-10. ⟨10.1111/nph.12007⟩
Article dans une revue hal-01071265 v1

Ecological and evolutionary genomics of marine photosynthetic organisms.

Susana M Coelho , Nathalie Simon , Sophia Ahmed , J Mark Cock , Frédéric Partensky
Molecular Ecology, 2013, 22 (3), pp.867-907. ⟨10.1111/mec.12000⟩
Article dans une revue hal-00817749 v1
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Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida.

Jonas Collén , Betina Porcel , Wilfrid Carré , Steven G Ball , Cristian Chaparro et al.
Proceedings of the National Academy of Sciences of the United States of America, 2013, 110 (13), pp.5247-52. ⟨10.1073/pnas.1221259110⟩
Article dans une revue hal-01073830 v1

Immunostaining of Ectocarpus Cells

S. M Coelho , D. Scornet , S. Rousvoal , N. Mark Peters , L. F Dartevelle et al.
Cold Spring Harbor protocols, 2012, 2012 (3), pdb.prot067975 - pdb.prot067975. ⟨10.1101/pdb.prot067975⟩
Article dans une revue hal-01926736 v1

How to Cultivate Ectocarpus

S. M Coelho , D. Scornet , S. Rousvoal , N. T Peters , L. Dartevelle et al.
Cold Spring Harbor protocols, 2012, 2012 (2), pdb.prot067934 - pdb.prot067934. ⟨10.1101/pdb.prot067934⟩
Article dans une revue hal-01926731 v1
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Ectocarpus: A Model Organism for the Brown Algae

Susana M Coelho , Delphine Scornet , Sylvie Rousvoal , Nick T Peters , Laurence Dartevelle et al.
Cold Spring Harbor protocols, 2012, 2012 (2), pdb.emo065821 - pdb.emo065821. ⟨10.1101/pdb.emo065821⟩
Article dans une revue hal-01926740 v1

Isolation and Regeneration of Protoplasts from Ectocarpus

S. M Coelho , D. Scornet , S. Rousvoal , N. Mark Peters , L. F Dartevelle et al.
Cold Spring Harbor protocols, 2012, 2012 (3), pdb.prot067959 - pdb.prot067959. ⟨10.1101/pdb.prot067959⟩
Article dans une revue hal-01926739 v1

The Ectocarpus Genome and Brown Algal Genomics The Ectocarpus Genome Consortium

J. Mark Cock , Lieven Sterck , Sophia Ahmed , Andrew E. Allen , Grigoris Amoutzias et al.
Advances in Botanical Research, 2012, 64, pp.141 - 184. ⟨10.1016/B978-0-12-391499-6.00005-0⟩
Article dans une revue hal-02649287 v1
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Genomics of brown algae: current advances and future prospects

J Mark Cock , Alok Arun , Olivier Godfroy , Nicolas Macaisne , Martina Strittmatter et al.
GENES & GENOMICS, 2012, 34, pp.1 - 5. ⟨10.1007/s13258-010-0225-0⟩
Article dans une revue hal-03441669 v1

Extraction of High-Quality Genomic DNA from Ectocarpus

S. M Coelho , D. Scornet , S. Rousvoal , N. Mark Peters , L. F Dartevelle et al.
Cold Spring Harbor protocols, 2012, 2012 (3), pdb.prot067967 - pdb.prot067967. ⟨10.1101/pdb.prot067967⟩
Article dans une revue hal-01926734 v1

Genetic Crosses between Ectocarpus Strains

S. M Coelho , D. Scornet , S. Rousvoal , N. Mark Peters , L. F Dartevelle et al.
Cold Spring Harbor protocols, 2012, 2012 (2), pdb.prot067942 - pdb.prot067942. ⟨10.1101/pdb.prot067942⟩
Article dans une revue hal-01926732 v1
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OUROBOROS is a master regulator of the gametophyte to sporophyte life cycle transition in the brown alga Ectocarpus

Susana M. Coelho , Olivier Godfroy , Alok Arun , Gildas Le Corguillé , Akira F. Peters et al.
Proceedings of the National Academy of Sciences of the United States of America, 2011, 108 (28), pp.11518-11523. ⟨10.1073/pnas.1102274108⟩
Article dans une revue hal-01806390 v1

Algal models in plant biology

J. Mark Cock , S. M Coelho
Journal of Experimental Botany, 2011, 62 (8), pp.2425 - 2430. ⟨10.1093/jxb/err117⟩
Article dans une revue hal-01926743 v1
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Microarray estimation of genomic inter-strain variability in the genus Ectocarpus (Phaeophyceae)

Simon M Dittami , Caroline Proux , Sylvie Rousvoal , Akira F Peters , J Mark Cock et al.
BMC Molecular Biology, 2011, 12, pp.2. ⟨10.1186/1471-2199-12-2⟩
Article dans une revue hal-00925432 v1
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Characterization of GDP-mannose Dehydrogenase from the Brown Alga Ectocarpus siliculosus Providing the Precursor for the Alginate Polymer

Raimund Tenhaken , Elena Voglas , J. Mark Cock , Volker Neu , Christian G Huber
Journal of Biological Chemistry, 2011, 286 (19), pp.16707 - 16715. ⟨10.1074/jbc.m111.230979⟩
Article dans une revue hal-01925539 v1
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In Silico Survey of the Mitochondrial Protein Uptake and Maturation Systems in the Brown Alga Ectocarpus siliculosus

Ludovic Delage , Catherine Leblanc , Pi Nyvall Collén , Bernhard Gschloessl , Marie-Pierre Oudot et al.
PLoS ONE, 2011, 6 (5), pp.e19540. ⟨10.1371/journal.pone.0019540⟩
Article dans une revue hal-01806425 v1
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Brown algae

J. Mark Cock , Akira F. Peters , Susana M. Coelho
Current Biology, 2011, 21 (15), pR573-R575. ⟨10.1016/j.cub.2011.05.006⟩
Article dans une revue hal-01806442 v1
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Genetic regulation of life cycle transitions in the brown alga ectocarpus

Susana M. Coelho , Olivier Godfroy , Alok Arun , Gildas Le Corguillé , Akira.F. Peters et al.
Plant Signaling & Behavior , 2011, 108, pp.11518 - 11523. ⟨10.1073/pnas.1102274108⟩
Article dans une revue hal-03441679 v1
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Central and storage carbon metabolism of the brown alga Ectocarpus siliculosus: insights into the origin and evolution of storage carbohydrates in Eukaryotes

Gurvan Michel , Thierry Tonon , Delphine Scornet , J. Mark Cock , Bernard Kloareg
New Phytologist, 2010, 188 (1), pp.67-81. ⟨10.1111/j.1469-8137.2010.03345.x⟩
Article dans une revue hal-01806417 v1

Role of endoreduplication and apomeiosis during parthenogenetic reproduction in the model brown alga Ectocarpus

John H. Bothwell , Dominique Marie , Akira F. Peters , J. Mark Cock , Susana M. Coelho
New Phytologist, 2010, 188 (1), pp.111-121. ⟨10.1111/j.1469-8137.2010.03357.x⟩
Article dans une revue hal-01254018 v1

Auxin Metabolism and Function in the Multicellular Brown Alga Ectocarpus siliculosus

A. Le Bail , B. Billoud , N. Kowalczyk , M. Kowalczyk , M. Gicquel et al.
Plant Physiology, 2010, 153 (1), pp.128 - 144. ⟨10.1104/pp.109.149708⟩
Article dans une revue hal-01925563 v1
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Copper stress proteomics highlights local adaptation of two strains of the model brown alga Ectocarpus siliculosus

Andrés A Ritter , Martin Ubertini , Sarah Romac , Fanny Gaillard , Ludovic Delage et al.
Proteomics, 2010, 10 (11), pp.2074 - 2088. ⟨10.1002/pmic.200900004⟩
Article dans une revue hal-01925564 v1
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Genetic diversity of Ectocarpus (Ectocarpales, Phaeophyceae) in Peru and northern Chile, the area of origin of the genome-sequenced strain

Akira F. Peters , Aaron D. Mann , César A. Córdova , Juliet Brodie , Juan A. Correa et al.
New Phytologist, 2010, 188 (1), pp.30-41. ⟨10.1111/j.1469-8137.2010.03303.x⟩
Article dans une revue hal-01806412 v1
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The Ectocarpus genome sequence: insights into brown algal biology and the evolutionary diversity of the eukaryotes

J. Mark Cock , Susana M. Coelho , Colin Brownlee , Alison R Taylor
New Phytologist, 2010, The Ectocarpus genome sequence’, 188 (1), pp.1-4. ⟨10.1111/j.1469-8137.2010.03454.x⟩
Article dans une revue hal-03441686 v1

Models for understanding eucaryote development

Delphine Cast , J. Mark Cock , Bernard Kloareg , Benoît Menand , Gurvan Michel et al.
Biofutur, 2010, 314, pp.30-33
Article dans une revue hal-01183325 v1
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Reinstatement of Ectocarpus crouaniorum Thuret in Le Jolis as a third common species of Ectocarpus (Ectocarpales, Phaeophyceae) in Western Europe, and its phenology at Roscoff, Brittany

Akira F Peters , Serinde J van Wijk , Ga Youn Cho , Delphine Scornet , Takeaki Hanyuda et al.
Phycological Research, 2010, 58 (3), pp.157 - 170. ⟨10.1111/j.1440-1835.2010.00574.x⟩
Article dans une revue istex hal-01925565 v1

The cell wall polysaccharide metabolism of the brown alga Ectocarpus siliculosus. Insights into the evolution of extracellular matrix polysaccharides in Eukaryotes

Gurvan Michel , Thierry Tonon , Delphine Scornet , J. Mark Cock , Bernard Kloareg
New Phytologist, 2010, 188 (1), pp.82-97. ⟨10.1111/j.1469-8137.2010.03374.x⟩
Article dans une revue hal-01806414 v1
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A sequence-tagged genetic map for the brown alga Ectocarpus siliculosus provides large-scale assembly of the genome sequence

Svenja Heesch , Ga Youn Cho , Akira F Peters , Gildas Le Corguillé , Cyril Falentin et al.
New Phytologist, 2010, 188 (1), pp.42-51. ⟨10.1111/j.1469-8137.2010.03273.x⟩
Article dans une revue hal-01806415 v1
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The $Ectocarpus$ genome and the independent evolution of multicellularity in brown algae

J. Mark Cock , Lieven Sterck , Pierre Rouzé , Delphine Scornet , Andrew E. Allen et al.
Nature, 2010, 465 (7298), pp.617-621. ⟨10.1038/nature09016⟩
Article dans une revue cea-00906990 v1
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Global expression analysis of the brown alga Ectocarpus siliculosus (Phaeophyceae) reveals large-scale reprogramming of the transcriptome in response to abiotic stress

Simon M Dittami , Delphine Scornet , Jean-Louis Petit , Béatrice Segurens , Corinne da Silva et al.
Genome Biology, 2009, 10, pp.R66. ⟨10.1186/gb-2009-10-6-r66⟩
Article dans une revue hal-01806423 v1
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Plastid genomes of two brown algae, Ectocarpus siliculosus and Fucus vesiculosus: further insights on the evolution of red-algal derived plastids

Gildas Le Corguillé , Gareth Pearson , Marta Valente , Carla Viegas , Bernhard Gschloessl et al.
BMC Evolutionary Biology, 2009, 9, pp.253. ⟨10.1186/1471-2148-9-253⟩
Article dans une revue hal-01806420 v1
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Life-cycle-generation-specific developmental processes are modified in the immediate upright mutant of the brown alga Ectocarpus siliculosus

Akira F. Peters , Delphine Scornet , Morgane Ratin , Bénédicte Charrier , Annabelle Monnier et al.
Development (Cambridge, England), 2008, 135 (8), pp.1503-1512. ⟨10.1242/dev.016303⟩
Article dans une revue hal-01806436 v1
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The FTO Gene, Implicated in Human Obesity, Is Found Only in Vertebrates and Marine Algae

Steven Robbens , Pierre Rouzé , J. Mark Cock , Jürg Spring , Alexandra Z Worden et al.
Journal of Molecular Evolution, 2008, 66 (1), pp.80-84. ⟨10.1007/s00239-007-9059-z⟩
Article dans une revue hal-01925570 v1

EARLY DEVELOPMENT PATTERN OF THE BROWN ALGA ECTOCARPUS SILICULOSUS (ECTOCARPALES, PHAEOPHYCEAE) SPOROPHYTE 1

Aude Le Bail , Bernard Billoud , Carole Maisonneuve , Akira F Peters , J. Mark Cock et al.
European Journal of Phycology, 2008, 44 (5), pp.1269 - 1281. ⟨10.1111/j.1529-8817.2008.00582.x⟩
Article dans une revue istex hal-01925566 v1

HECTAR: A method to predict subcellular targeting in heterokonts

Bernhard Gschloessl , Yann Guermeur , J. Mark Cock
BMC Bioinformatics, 2008, 9 (393), pp.9:393. ⟨10.1186/1471-2105-9-393⟩
Article dans une revue hal-00359779 v1

Scent evolution in Chinese roses

Gabriel Scalliet , Florence Piola , Christophe Jean Douady , Stéphane Réty , Olivier Raymond et al.
Proceedings of the National Academy of Sciences of the United States of America, 2008, 105 (15), pp.5927-5932. ⟨10.1073/pnas.0711551105⟩
Article dans une revue hal-02662642 v1
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Normalisation genes for expression analyses in the brown alga model Ectocarpus siliculosus

Aude Le Bail , Simon Dittami , Pierre-Olivier de Franco , Sylvie Rousvoal , J. Mark Cock et al.
BMC Molecular Biology, 2008, 9, pp.75. ⟨10.1186/1471-2199-9-75⟩
Article dans une revue hal-01806432 v1
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Development and physiology of the brown alga Ectocarpus siliculosus: two centuries of research

Bénédicte Charrier , Susana Coelho , Aude Le Bail , Thierry Tonon , Gurvan Michel et al.
New Phytologist, 2008, 177 (2), pp.319-332. ⟨10.1111/j.1469-8137.2007.02304.x⟩
Article dans une revue hal-01806426 v1
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Production and Emission of Volatile Compounds by Petal Cells.

Sylvie Baudino , Jean Claude Caissard , Véronique Bergougnoux , Frédéric Jullien , Jean-Louis Magnard et al.
Plant Signaling and Behavior, 2007, 2 (6), pp.525-526
Article dans une revue ujm-00188391 v1

Both the adaxial and abaxial epidermal layers of the rose petal emit volatile scent compounds

Véronique Bergougnoux , Jean-Claude Caissard , Frédéric Jullien , Jean-Louis Magnard , Gabriel Scalliet et al.
Planta, 2007, 226 (4), pp.853-866. ⟨10.1007/s00425-007-0531-1⟩
Article dans une revue istex hal-04735828 v1
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Complex life cycles of multicellular eukaryotes: New approaches based on the use of model organisms

Susana Coelho , Akira F Peters , Bénédicte Charrier , Denis Roze , Christophe Destombe et al.
Gene, 2007, 406 (1-2), pp.152 - 170. ⟨10.1016/j.gene.2007.07.025⟩
Article dans une revue hal-01926745 v1

Both the adaxial and abaxial epidermal layers of the rose petal emit volatile scent compounds.

V. Bergougnoux , J.C. Caissard , Florence Jullien , Jean-Louis Magnard , Gabriel Scalliet et al.
Planta, 2007, 226 (4), pp.853-866. ⟨10.1007/s00425-007-0531-1⟩
Article dans une revue istex hal-00189101 v1

BIGPETALp, a bHLH transcription factor is involved in the control of Arabidopsis petal size.

Judit Szécsi , Caroline Joly , Karim Bordji , Emilie Varaud , J. Mark Cock et al.
EMBO Journal, 2006, 25 (16), pp.3912-3920. ⟨10.1038/sj.emboj.7601270⟩
Article dans une revue hal-00188912 v1

Role of Petal-Specific Orcinol O -Methyltransferases in the Evolution of Rose Scent

Gabriel Scalliet , Claire Lionnet , Mickaël Le Bechec , Laurence Dutron , Jean-Louis Magnard et al.
Plant Physiology, 2006, 140 (1), pp.18-29. ⟨10.1104/pp.105.070961⟩
Article dans une revue hal-04735831 v1

Role of Petal-specific Orcinol O-methyltransferases in the Evolution of Rose Scent.

G. Scalliet , C. Lionnet , M. Le Bechec , L. Dutronc , J.-L. Magnard et al.
Plant Physiology, 2006, 140, pp.18-29
Article dans une revue hal-00092536 v1
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GeneFarm, structural and functional annotation of Arabidopsis gene and protein families by a network of experts

Sebastien Aubourg , Veronique Brunaud , Clémence Bruyère , J. Mark Cock , Richard Cooke et al.
Nucleic Acids Research, 2005, 33, pp.D641-D646. ⟨10.1093/nar/gki115⟩
Article dans une revue hal-01189162 v1

Proposal of Ectocarpus siliculosus (Ectocarpales, Phaeophyceae) as a model organism for brown algal genetics and genomics

A. Peters , D. Marie , D. Scornet , B. Kloareg , J. Mark Cock
Journal of Phycology, 2005, 41, pp.226
Article dans une revue hal-00098384 v1
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A W-box is required for full expression of the SA-responsive gene SFR2

Anne Rocher , Christian Dumas , J. Mark Cock
Gene, 2005, 344, pp.181 - 192. ⟨10.1016/j.gene.2004.09.016⟩
Article dans une revue hal-01925572 v1

Antisense suppression of thioredoxinhmRNA in Brassica napus cv.

Yosr Haffani , Thierry Gaude , J. Mark Cock , Daphne Goring
Plant Molecular Biology, 2004, 55 (5), pp.619 - 630. ⟨10.1007/s11103-004-1126-x⟩
Article dans une revue istex hal-01925575 v1

Proposal of Ectocarpus siliculosus (Ectocarpales, Phaeophyceae) as a model organism for brown algal genetics and genomics.

A.F. Peters , D. Marie , D. Scornet , B. Kloareg , J. Mark Cock
Journal of Phycology, 2004, 40, pp.1079-1088
Article dans une revue hal-00098356 v1

Inheritance of organelles in artificial hybrids of the isogamous multicellular chromist alga Ectocarpus siliculosus (Phaeophyceae)

Akira F Peters , Delphine Scornet , Dieter Müller , Bernard Kloareg , J Mark Cock
European Journal of Phycology, 2004, 39 (3), pp.235 - 242. ⟨10.1080/09670260410001683241⟩
Article dans une revue hal-01925574 v1

Making inroads into plant receptor kinase signalling pathways

Gabrielle Tichtinsky , Vincent Vanoosthuyse , J. Mark Cock , Thierry Gaude
Trends in Plant Science, 2003, 8 (5), pp.231 - 237. ⟨10.1016/s1360-1385(03)00062-1⟩
Article dans une revue (article de synthèse) istex hal-01926780 v1

Making inroads into plant receptor kinase signalling pathways

Gabrielle Tichtinsky , V. Vanoosthuyse , J. Mark Cock , Thierry Gaude
Trends in Plant Science, 2003, 8 (5), pp.231-237. ⟨10.1016/S1360-1385(03)00062-1⟩
Article dans une revue istex hal-03032851 v1

Interaction of Calmodulin, a Sorting Nexin and Kinase-Associated Protein Phosphatase with the Brassica oleracea S Locus Receptor Kinase

V. Vanoosthuyse , Gabrielle Tichtinsky , Christian Dumas , Thierry Gaude , J. Mark Cock
Plant Physiology, 2003, 133 (2), pp.919-929. ⟨10.1104/pp.103.023846⟩
Article dans une revue hal-03032848 v1

Interaction of Calmodulin, a Sorting Nexin and Kinase-Associated Protein Phosphatase with the Brassica oleracea S Locus Receptor Kinase

Vincent Vanoosthuyse , Gabrielle Tichtinsky , Christian Dumas , Thierry Gaude , J. Mark Cock
Plant Physiology, 2003, 133 (2), pp.919 - 929. ⟨10.1104/pp.103.023846⟩
Article dans une revue hal-01925576 v1

Biosynthesis of the major scent components 3,5-dimethoxytoluene and 1,3,5-trimethoxybenzene by novel rose O-methyltransferases

Gabriel Scalliet , Noellie Journot , Frédéric Jullien , Sylvie Baudino , Jean-Louis Magnard et al.
FEBS Letters, 2002
Article dans une revue hal-01925579 v1

Comparison of the expression patterns of two small gene families of S gene family receptor kinase genes during the defence response in Brassica oleracea and Arabidopsis thaliana

Martine Pastuglia , Ranjan Swarup , Anne Rocher , Patrick Saindrenan , Dominique Roby et al.
Gene, 2002, 282 (1-2), pp.215-225. ⟨10.1016/S0378-1119(01)00821-6⟩
Article dans une revue istex hal-01925582 v1

Biosynthesis of the major scent components 3,5‐dimethoxytoluene and 1,3,5‐trimethoxybenzene by novel rose O ‐methyltransferases

Gabriel Scalliet , Noellie Journot , Frédéric Jullien , Sylvie Baudino , Jean-Louis Magnard et al.
FEBS Letters, 2002, 523 (1-3), pp.113-118. ⟨10.1016/s0014-5793(02)02956-3⟩
Article dans une revue hal-04735849 v1

Analysis of gene expression in rose petals using expressed sequence tags

Stéphanie Channelière , Stëphane Riviere , Gabriel Scalliet , Judit Szécsi , Frédéric Jullien et al.
FEBS Letters, 2002, 515 (1-3), pp.35-38. ⟨10.1016/S0014-5793(02)02413-4⟩
Article dans une revue hal-01925580 v1
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Receptor kinase signalling in plants and animals: distinct molecular systems with mechanistic similarities

J. Mark Cock , Vincent Vanoosthuyse , Thierry Gaude
Current Opinion in Cell Biology, 2002
Article dans une revue hal-01926798 v1

Receptor kinase signalling in plants and animals: distinct molecular systems with mechanistic similarities

J. Mark Cock , V. Vanoosthuyse , Thierry Gaude
Current Opinion in Cell Biology, 2002, 14 (2), pp.230-236. ⟨10.1016/s0955-0674(02)00305-8⟩
Article dans une revue hal-03032855 v1
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Two large Arabidopsis thaliana gene families are homologous to the Brassica gene superfamily that encodes pollen coat proteins and the male component of the self-incompatibility response

Vincent Vanoosthuyse , Christine Miege , Christian Dumas , J. Mark Cock
Plant Molecular Biology Reporter, 2001, 46, pp.17 - 34. ⟨10.1023/a:1010664704926⟩
Article dans une revue hal-01926539 v1

Further analysis of the interactions between the Brassica S receptor kinase and three interacting proteins (ARC1, THL1 and THL2) in the yeast two-hybrid system

Maria Mazzurco , Waheeda Sulaman , Helen Elina , J. Mark Cock , Daphne R Goring
Plant Molecular Biology Reporter, 2001, 45, pp.365 - 376
Article dans une revue hal-01926525 v1

Intrahaplotype polymorphism at the Brassica S locus

Cecile Miege , V. Ruffio-Châble , M.H. Schierup , D. Cabrillac , C. Dumas et al.
Genetics, 2001, 159, pp.811-822
Article dans une revue hal-02674927 v1

Intrahaplotype Polymorphism at the Brassica S Locus

Christine Miege , Véronique Ruffio-Châble , Mikkel H Schierup , Didier Cabrillac , Christian Dumas et al.
Genetics, 2001, 159 (2), pp.811-822
Article dans une revue hal-01925589 v1
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The S-locus receptor kinase is inhibited by thioredoxins and activated by pollen coat proteins

Didier Cabrillac , J. Mark Cock , Christian Dumas , Thierry Gaude
Nature, 2001, 410, pp.220-223. ⟨10.1038/35065626⟩
Article dans une revue hal-01925586 v1

A Large Family of Genes That Share Homology with CLAVATA3

J. Mark Cock , Sheila Mccormick
Plant Physiology, 2001
Article dans une revue hal-01925591 v1

Investigating the molecular mechanism of the self-incompatility response in Brassica

J. Mark Cock , D. Cabrillac , J.L. Giranton , Martine Pastuglia , V. Ruffio-Châble et al.
Annals of Botany, 2000, 85 (sp.), n.p
Article dans une revue hal-02695604 v1

Investigating the Molecular Mechanism of the Self-incompatibility Response in Brassica

J. Mark Cock , Didier Cabrillac , C Giranton , Martine Pastuglia , Veronique Ruffio-Chable et al.
Annals of Botany, 2000, 85, pp.147 - 153. ⟨10.1006/anbo.1999.1042⟩
Article dans une revue hal-01926783 v1
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The integral membrane S-locus receptor kinase of Brassica has serinethreonine kinase activity in a membranous environment and spontaneously forms oligomers in planta

Jean-Loïc Giranton , Christian Dumas , J. Mark Cock , T. Gaude
Proceedings of the National Academy of Sciences of the United States of America, 2000, 97 (7), pp.3759-3764. ⟨10.1073/pnas.97.7.3759⟩
Article dans une revue hal-01926568 v1

The S15 self-incompatibility haplotype in Brassica oleracea includes three S gene family members expressed in stigmas

D. Cabrillac , Valérie Delorme , J. Garin , V. Ruffio-Châble , J.L. Giranton et al.
The Plant cell, 1999, 11, pp.971-986
Article dans une revue hal-02690817 v1
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The S 15 Self-Incompatibility Haplotype in Brassica oleracea Includes Three S Gene Family Members Expressed in Stigmas

Didier Cabrillac , Valérie Delorme , Jérôme Garin , Véronique Ruffio-Châble , Jean-Loïc Giranton et al.
The Plant cell, 1999, 11, pp.971 - 986. ⟨10.1105/tpc.11.5.971⟩
Article dans une revue hal-01926532 v1

Identification of a gene linked to the Brassica S (self-incompatibility) locus by differential display

Christine Miege , Christian Dumas , J. Mark Cock
Comptes rendus de l’Académie des sciences. Série III, Sciences de la vie, 1999, 322 (12), pp.1051-1060. ⟨10.1016/s0764-4469(99)00104-3⟩
Article dans une revue istex hal-01926536 v1

The molecular mechanism of self-incompatibility in Brassica: recent advances

J.L. Giranton , Martine Pastuglia , C. Dumas , Thierry Gaude , J. Mark Cock
Acta Agronomica Hungarica, 1998, 46 (4), pp.431-438
Article dans une revue hal-02693667 v1

Cell cycle regulation of expression of nuclear gene(s) encoding chloroplastic, ammonium-inducible glutamate dehydrogenases in Chlorella sorokiniana.

Robert R. Schmidt , J. Mark Cock
Cell and Tissue Kinetics, 1998
Article dans une revue hal-03086451 v1
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Rapid lnduction by Wounding and Bacterial Infection of an S Gene Family Receptor-like Kinase Gene in Brassica oleracea

Martine Pastuglia , Dominique Roby , Christian Dumas , J. Mark Cock
The Plant cell, 1997, 9, pp.49-60. ⟨10.1105/tpc.9.1.49⟩
Article dans une revue hal-01926645 v1

Natural antisense transcripts of the S locus receptor kinase gene and related sequences in Brassica oleracea

J. Mark Cock , Swarup Ranjan , Dumas Christian
Molecular and General Genetics MGG, 1997, 255 (5), pp.514-524. ⟨10.1007/s004380050524⟩
Article dans une revue istex hal-01926580 v1

Rapid induction by wounding and bacterial infection of an S gene family receptor-like kinase gene in Brassica oleracea

Martine Pastuglia , D. Roby , C. Dumas , J. Mark Cock
The Plant cell, 1997, 9, pp.49-60
Article dans une revue hal-02692178 v1
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A functional S locus anther gene is not required for the self-incompatibility response in Brassica oleracea.

Martine Pastuglia , Véronique Ruffio-Châble , Valérie Delorme , Thierry Gaude , Christian Dumas et al.
The Plant cell, 1997, 9 (11), pp.2065-2076. ⟨10.1105/tpc.9.11.2065⟩
Article dans une revue hal-01926573 v1

Natural antisense transcripts of the S locus receptor kinase gene and related sequences in Brassica oleracea

J. Mark Cock , Ranjan Swarup , C. Dumas
Molecular and General Genetics MGG, 1997, 255, pp.514-524
Article dans une revue hal-02698185 v1

A new class of receptor-like protein kinase gene from Arabidopsis thaliana possessing a domain with similarity to plant lectin genes (EMBL accession number X95909)

Ranjan Swarup , C. Dumas , J. Mark Cock
Plant Physiology, 1996, 111, pp.347-348
Article dans une revue hal-02689478 v1

S-locus glycoproteins are expressed along the path of pollen tubes in Brassica pistils

C. Kleman-Mariac , M. Rougier , J. Mark Cock , Thierry Gaude , C. Dumas
Planta, 1995, 196, pp.614-621
Article dans une revue hal-02708694 v1

SLR3: a modified receptor kinase gene that has been adapted to encode a putative secreted glycoprotein similar to the S locus glycoprotein

J. Mark Cock , Borislav Stanchev , Valérie Delorme , Ronald R. D. Croy , Christian Dumas
MGG Molecular & General Genetics, 1995
Article dans une revue hal-01926671 v1

Characterization of the S locus genes, SLG and SRK, of the Brassica S3 haplotype: identification of a membrane-localized protein encoded by the S locus receptor kinase gene

Valérie Delorme , J.L. Giranton , Yves Hatzfeld , A. Friry , P. Heizmann et al.
The Plant Journal, 1995, 7 (3), pp.429-440
Article dans une revue hal-02704966 v1

PCR-generated cDNA library of transition-stage maize embryos: cloning and expression of calmodulin genes during early embryogenesis

C. Breton , Annie Chaboud , E. Matthys-Rochon , E.E.M. Bates , J. Mark Cock et al.
Plant Molecular Biology, 1995, 27, pp.105-113
Article dans une revue hal-02714706 v1

SLR3: a modified receptor kinase gene that has been adapted to encode a putative secreted glycoprotein similar to the S locus glycoprotein

J. Mark Cock , B. Stanchev , Valérie Delorme , R.R.D. Croy , C. Dumas
Molecular and General Genetics MGG, 1995, 248, pp.151-161
Article dans une revue hal-02709825 v1

PCR-generated cDNA library of transition-stage maize embryos: cloning and expression of calmodulin genes during early embryogenesis.

C. Breton , A. Chaboud , E. Matthys-Rochon , Ee Bates , Jm Cock et al.
Plant Molecular Biology, 1995, 27, pp.105-113
Article dans une revue hal-00314514 v1
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The S locus receptor kinase gene encodes a soluble glycoprotein corresponding to the SKR extracellular domain in Brassica oleracea.

Jean-Loïc Giranton , Maria José Ariza , Christain Dumas , J. Mark Cock , Thierry Gaude
The Plant Journal, 1995, 8 (6), pp.827-834. ⟨10.1046/j.1365-313X.1995.8060827.x⟩
Article dans une revue hal-01926654 v1
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Characterization of the S locus genes, SLG and SRK, of the Brassica S3 haplotype: identification of a membrane-localized protein encoded by the S locus receptor kinase gene

Valerie Delorme , Jean-Loic Giranton , Yves Hatzfeld , Aline Friry , Philippe Heizmann et al.
The Plant Journal, 1995, 7 (3), pp.429-440. ⟨10.1046/j.1365-313x.1995.7030429.x⟩
Article dans une revue hal-03086441 v1

S-locus glycoproteins are expressed along the path of pollen tubes in Brassica pistils

Chantai Kleman-Mariac , Mireille Rougier , J. Mark Cock , Thierry Gaude , Christian Dumas
Planta, 1995, 196 (3), pp.614-621. ⟨10.1007/BF00203663⟩
Article dans une revue istex hal-01926677 v1

PCR-generated cDNA library of transition-stage maize embryos: cloning and expression of calmodulin genes during early embryogenesis

Christian Breton , Annie Chaboud , Elisabeth Matthys-Rochon , Elizabeth E M Bates , J. Mark Cock et al.
Plant Molecular Biology Reporter, 1995, 27 (1), pp.105 - 113. ⟨10.1007/BF00019182⟩
Article dans une revue istex hal-01926680 v1

The S locus receptor kinase gene encodes a soluble glycoprotein corresponding to the SRK extracellular domain in Brassica oleracea

J.L. Giranton , M.J. Ariza , C. Dumas , J. Mark Cock , Thierry Gaude
The Plant Journal, 1995, 8 (6), pp.827-834
Article dans une revue hal-02705476 v1

Characterization of the gene encoding the plastid-located glutamine synthetase of Phaseolus vulgaris: regulation of B-glucuronidase gene fusions in transgenic tobacco

J. Mark Cock , P. Hemon , Julie Vera Cullimore
Plant Molecular Biology, 1992, 18, pp.1141-1149
Article dans une revue hal-02701710 v1

Characterization of the gene encoding the plastid-located glutamine synthetase of Phaseolus vulgaris: regulation of/-glucuronidase gene fusions in transgenic tobacco

J. Mark Cock , Pascale Hémon , Julie V Cullimore
Plant Molecular Biology Reporter, 1992, 18, pp.1141 - 1149
Article dans une revue hal-01926686 v1

Enzymes depending on the pterin molybdenum cofactor: sequence families, spectroscopic properties of molybdenum and possible cofactor-binding domains

John C Wootton , Rachel E Nicolson , J. Mark Cock , Dawn E Waiters , Julian F Burke et al.
BBA - Biochimica et Biophysica Acta, 1991, 1057, pp.157 - 185
Article dans une revue hal-01926852 v1

Regulation of glutamine synthetase genes in leaves of Phaseolus vulgaris

J. Mark Cock , Ian W Brock , Adam T Watson , Ranjan Swarup , Andrew P Morby et al.
Plant Molecular Biology Reporter, 1991, 17, pp.761 - 771
Article dans une revue hal-01926699 v1

A nitrate reduetase gene of the cyanobacterium Synechococcus PCC6301 inferred by heterologous hybridization, cloning and targeted mutagenesis

D A Lightfoot , a J Baron , J. Mark Cock , J C Wootton
Genetica, 1991, 85, pp.107 - 117
Article dans une revue hal-01926694 v1

A nuclear gene with many introns encoding ammonium-inducible chloroplastic NADP-specific glutamate dehydrogenase(s) in Chlorella sorokiniana

J. Mark Cock , Kyu Don Kim , Philip H. Miller , Richard G Hutson , Robert R Schmidt
Plant Molecular Biology Reporter, 1991, 17, pp.1023 - 1044
Article dans une revue hal-01926702 v1

Expression of glutamine synthetase genes in roots and nodules of Phaseolus vulgaris following changes in the ammonium supply and infection with various Rhizobium mutants

J. Mark Cock , Ruth M Mould , Malcolm Bennett , Julie V Cullimore
Plant Molecular Biology Reporter, 1990, 14, pp.549 - 560
Article dans une revue hal-01926706 v1

RESTRICTION ENZYME ANALYSIS AND CLONING OF HIGH MOLECULAR WEIGHT GENOMIC DNA ISOLATED FROM CHLORELLA SOROKINIANA (CHLOROPHYTA)

J. Mark Cock , Lori L. Roof , Newell F. Bascomb , Charles W. Gehrke , Kenneth C. Kuo et al.
Journal of Phycology, 1990
Article dans une revue hal-01926710 v1

A glutamate dehydrogenase gene sequence

J. Mark Cock , Robert R Schmidt
Nucleic Acids Research, 1989
Article dans une revue hal-01926718 v1

Genetic diversity in the UV sex chromosomes of the brown alga Ectocarpus

Komlan Avia , Agnieszka P. Lipinska , Laure Mignerot , Gabriel J Montecinos , M. Jamy et al.
GDRI Diversity, Evolution and Biotechnology of Marine algae workshop "Sex and reproduction in marine algae", Jan 2019, Roscoff, France
Communication dans un congrès hal-02947586 v1

Genetic Tools For The Development Of Improved Cultivars Of Saccharina latissima

Zofia Nehr , Komlan Avia , Stéphane Mauger , Bertrand Jacquemin , Émilie Gouhier et al.
23rd International Seaweed Symposium, Apr 2019, Jeju, North Korea
Communication dans un congrès hal-02947582 v1

GENetic diversity exploitation of Saccharina latissima for Innovative macro-ALGal biorefinery in Europe

Philippe Potin , Zofia Nehr , Paolo Ruggeri , Komlan Avia , Stéphane Mauger et al.
23rd International Seaweed Symposium, Apr 2019, Jeju, South Korea
Communication dans un congrès hal-02947585 v1
Image document

Towards a genetic map for the brown alga Saccorhiza polyschides

Svenja Heesch , Ga Youn Cho , Akira F. Peters , Gildas Le Corguillé , Cyril Falentin et al.
German Botanical Society (DBG) meeting, Mar 2018, Berchtesgaden, Germany
Communication dans un congrès hal-02947599 v1

UV sex chromosome evolution in seaweeds

Agnieszka P. Lipinska , Nicholas Toda , Svenja Heesch , Laure Mignerot , Komlan Avia et al.
Population Genetics Group meeting, Jan 2017, Cambridge, United Kingdom
Communication dans un congrès hal-02947589 v1

QTL mapping in the model brown alga Ectocarpus

Komlan Avia , Susana M. Coelho , Gabriel J Montecinos , Alexandre Cormier , Fiona Lerck et al.
8th annual meeting EFOR network, session " Genomic, evolution and adaptation", May 2017, Paris, France
Communication dans un congrès hal-02947618 v1

QTL mapping of stress related traits in the model brown alga Ectocarpus sp

Komlan Avia , Susana M. Coelho , Gabriel J Montecinos , Alexandre Cormier , Fiona Lerck et al.
Journées phycologiques de la société phycologique de France, Sep 2015, Vannes, France
Communication dans un congrès hal-02947470 v1

QTL mapping of stress related traits in <em>Ectocarpus</em>

Komlan Avia , Susana M. Coelho , Gabriel J Montecinos , Alexandre Cormier , Fiona Lerck et al.
5th annual meeting of the GDR MarCo « Marine Connectivity », Oct 2015, Montpellier, France
Communication dans un congrès hal-02947466 v1

Nature, nurture and the structure of macroalgal genomes

J. Mark Cock , Jonas Collen , Lieven Sterck , Pierre Rouzé , Delphine Scornet et al.
5. European Phycological Congress, Sep 2011, Rhodes, Greece
Communication dans un congrès hal-02749757 v1

Genomic analysis of economically important seaweeds

J. Mark Cock , Catherine Leblanc , C Colin , Jonas Collén , Vincent Roeder et al.
Marine Biotechnology Congress, 2004, Chiba, Japan
Communication dans un congrès hal-03447105 v1

Parfum de rose

Sylvie Baudino , Véronique Bergougnoux , Jean Louis Magnard , F. Jullien , Jean Claude Caissard et al.
Jardins de France, 2003, Lyon, France
Communication dans un congrès hal-03447141 v1

Protéines membranaires dans les interactions pollen-pistil

Thierry Gaude , Jean-Loic Giranton , J. Mark Cock , Christian Dumas
Ecole Thématique “Biologie Végétale”, Les Protéines des Membranes Végétales, Les Houches, France., 1997, Les Houches, France
Communication dans un congrès hal-03447188 v1

The S locus receptor kinase and the self-incompatibility response in Brassica

Jean-Loic Giranton , Valerie Delorme , Martine Pastuglia , M.J. Ariza , Dumas Christian et al.
Protein Phosphorylation in Plants, 2nd European Symposium, 1997, Lyon, France
Communication dans un congrès hal-03447183 v1

Regulation of expression of the gln-g gene of Phaseolus vulgaris L..

J. Mark Cock , J.V. Cullimore , K.J.F. Farnden , M.J. Bennett
Proceedings of the 8th International Symposium of Nitrogen Fixation, Knoxville, Tennessee, 1990, Knoxville, United States
Communication dans un congrès hal-03447215 v1

A key role for UV sex chromosomes in the regulation of parthenogenesis in the brown alga Ectocarpus

Laure Mignerot , Komlan Avia , Rémy Luthringer , Agnieszka P. Lipinska , Akira F Peters et al.
GDRI Diversity, Evolution and Biotechnology of Marine algae workshop "Sex and reproduction in marine algae", Jan 2019, Roscoff, France. 2019
Poster de conférence hal-02947591 v1

Characterisation of brown alga mutants indicates deep evolutionary origins of life cycle regulatory pathways

J. Mark Cock , Alok Arun , Olivier Godfroy , Agnieszka P. Lipinska , Delphine Scornet et al.
Jacques Monod conference "Sex uncovered: the evolutionary biology of reproductive systems", Apr 2018, Roscoff, France. 2018
Poster de conférence hal-02947597 v1

Towards the developpement of improved cultivars of Saccharina latissima for large-scale cultivation

Zofia Nehr , Ousseini Issaka-Salia , Bertrand Jacquemin , Komlan Avia , Stéphane Mauger et al.
Tjarno International Seaweed Conference 2018, Jun 2018, Tjarno, Sweden. 2018
Poster de conférence hal-02947594 v1

Genetic and cellular characterization of parthenogenesis in the brown alga Ectocarpus

Laure Mignerot , Rémy Luthringer , Komlan Avia , Agnieszka P. Lipinska , J. Mark Cock et al.
Jacques Monod conference "Sex uncovered: the evolutionary biology of reproductive systems", Apr 2018, Roscoff, France. 2018
Poster de conférence hal-02947598 v1
Image document

Studying temperature and salinity stresses in the model brown alga Ectocarpus sp. by QTL mapping

Komlan Avia , Susana M. Coelho , Alexandre Cormier , Fiona Lercker , Stéphane Mauger et al.
5th International Conference on Quantitative Genetics, Jun 2016, Madison, United States. 2016
Poster de conférence hal-02947471 v1

QTL mapping of stress related traits in the model brown alga Ectocarpus

Komlan Avia , Fiona Lerck , Stéphane Mauger , Susana M. Coelho , Pierre Boudry et al.
15. Congress of the European Society for Evolutionary Biology (ESEB 2015), Aug 2015, Lausanne, Switzerland. , 2015
Poster de conférence hal-02947467 v1
Image document

Genetic and Developmental Mechanisms of Cellular Differentiation in Algae

Susana Coelho , J. Mark Cock
Matthew D. Herron; Peter L. Conlin; William C. Ratcliff. The Evolution of Multicellularity, 1, CRC Press, pp.301-324, 2022, 9780429351907. ⟨10.1201/9780429351907-19⟩
Chapitre d'ouvrage hal-03671226 v1

Alternation of Generations in Plants and Algae

Simon Bourdareau , Laure Mignerot , Svenja Heesch , Akira Peters , Susana Coelho et al.
Evolutionary Developmental Biology, Springer International Publishing, pp.1-14, 2017, ⟨10.1007/978-3-319-33038-9_58-1⟩
Chapitre d'ouvrage hal-03443575 v1

Independent Emergence of Complex Multicellularity in the Brown and Red Algae

J. Mark Cock , Jonas Collén
Evolutionary Transitions to Multicellular Life, 2, Springer Netherlands, pp.335-361, 2015, Advances in Marine Genomics, ⟨10.1007/978-94-017-9642-2_16⟩
Chapitre d'ouvrage hal-03443521 v1

Emergence of Ectocarpus as a Model System to Study the Evolution of Complex Multicellularity in the Brown Algae

J. Mark Cock , Olivier Godfroy , Martina Strittmatter , Delphine Scornet , Toshiki Uji et al.
Evolutionary Transitions to Multicellular Life, 2, Springer Netherlands, pp.153-162, 2015, Advances in Marine Genomics, ⟨10.1007/978-94-017-9642-2_8⟩
Chapitre d'ouvrage hal-03443554 v1

Genomics of Marine Algae

Susana Coelho , Svenja Heesch , Nigel Grimsley , Hervé Moreau , J. Mark Cock
Introduction to Marine Genomics, Springer Netherlands, pp.179-211, 2010, ⟨10.1007/978-90-481-8639-6_6⟩
Chapitre d'ouvrage hal-03443342 v1

Marine Genomics and the Exploration of Marine Biodiversity

J. Mark Cock , Delphine Scornet , Susana M. Coelho , Bénédicte Charrier , Catherine Boyen et al.
Duatre, C.M. The exploration of Marine Biodiversity, 117-141, BBVA Foundation, Bilbao, Spain, 2006, 84-96515-27-3
Chapitre d'ouvrage hal-03443467 v1
Image document

Model Plants and Functional Genomic Approaches Applied to the Characterization of Genes Involved in Floral Scent Biosynthesis

Gabriel Scalliet , Sylvie Baudino , J. Mark Cock , Philippe Hugueney
Floriculture, ornamental and plant biotechnology: advances and topical issue, 2006
Chapitre d'ouvrage hal-03441707 v1

Inducibility of the glutamine synthetase gene family of Phaseolus vulgaris L.

Julie Vera Cullimore , J. Mark Cock , T.J. Daniell , Ranjan Swarup , M.J. Benett
Society for Experimental Biology Seminar series 49, Cambridge University Press, 1992
Chapitre d'ouvrage hal-02846612 v1

Nitrate reductase genes from a range of bacteria

J. Mark Cock
Life Sciences [q-bio]. University of Leeds, 1985. English. ⟨NNT : ⟩
Thèse tel-03446714 v1