Justine CHARON

Researcher in Plant Virology - INRAE

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Affiliations actuelles

Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)
Biologie du fruit et pathologie (BFP)

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Publications

	Consensus statement from the second RdRp Summit: towards a unified framework for RNA virus biology Alexander Lucaci , Hisham Shaikh , Li Chong Chong , Rachid Tahzima , Marco Forgia et al. Peer Community Journal, 2026, 6, pp.e50. ⟨10.24072/PCJOURNAL.727⟩ Article dans une revue hal-05679034v1
	Mapping the global distribution and spread of the Plasmodium vivax -associated virus MaRNAV-1 Mary E. Petrone , Justine Charon , Rhys H. Parry , Matthew J. Grigg , Kim A. Piera et al. Virus Evolution, 2026, 12 (1), 9 p. ⟨10.1093/ve/veag031⟩ Article dans une revue hal-05679056v1
	Viral replication modulated by hallmark conformational ensembles: how AlphaFold-predicted features of RdRp folding dynamics combined with intrinsic disorder-mediated function enable RNA virus discovery Rachid Tahzima , Justine Charon , Adrian Diaz , Kris de Jonghe , Sebastien Massart et al. Frontiers in Virology, 2025, 5, pp.1501616. ⟨10.3389/fviro.2025.1501616⟩ Article dans une revue hal-05267402v1
	Consensus statement from the first RdRp Summit: advancing RNA virus discovery at scale across communities Justine Charon , Ingrida Olendraite , Marco Forgia , Li Chuin Chong , Luke S Hillary et al. Frontiers in Virology, 2024, 4, ⟨10.3389/fviro.2024.1371958⟩ Article dans une revue hal-04612201v1
	A virus associated with the zoonotic pathogen Plasmodium knowlesi causing human malaria is a member of a diverse and unclassified viral taxon Mary Petrone , Justine Charon , Matthew J. Grigg , Timothy William , Giri Rajahram et al. Virus Evolution, 2024, 10 (1), pp.veae091. ⟨10.1101/2024.09.18.613759⟩ Article dans une revue hal-05466216v1
	Human land use impacts viral diversity and abundance in a New Zealand river Rebecca French , Justine Charon , Callum Le Lay , Chris Muller , Edward Holmes Virus Evolution, 2022, 8 (1), pp.veac032. ⟨10.1093/ve/veac032⟩ Article dans une revue hal-04995480v1
	Diverse RNA Viruses Associated with Diatom, Eustigmatophyte, Dinoflagellate, and Rhodophyte Microalgae Cultures Justine Charon , Tim Kahlke , Michaela Larsson , Raffaela Abbriano , Audrey Commault et al. Journal of Virology, 2022, 96 (20), 18 p. ⟨10.1128/jvi.00783-22⟩ Article dans une revue hal-04995485v1
	Meta-transcriptomics reveals potential virus transfer between Aedes communis mosquitoes and their parasitic water mites Ayda Susana Ortiz-Baez , Edward Holmes , Justine Charon , John H-O Pettersson , Jenny Hesson Virus Evolution, 2022, 8 (2), ⟨10.1093/ve/veac090⟩ Article dans une revue hal-04995486v1
	RdRp-scan: A bioinformatic resource to identify and annotate divergent RNA viruses in metagenomic sequence data Justine Charon , Jan Buchmann , Sabrina Sadiq , Edward Holmes Virus Evolution, 2022, 8 (2), ⟨10.1093/ve/veac082⟩ Article dans une revue hal-04995469v1
	Analysis of the Contribution of Intrinsic Disorder in Shaping Potyvirus Genetic Diversity Guillaume Lafforgue , Thierry Michon , Justine Charon Viruses, 2022, 14 (9), pp.1959. ⟨10.3390/v14091959⟩ Article dans une revue hal-03783597v1
	Revealing RNA virus diversity and evolution in unicellular algae transcriptomes Justine Charon , Shauna Murray , Edward Holmes Virus Evolution, 2021, 7 (2), pp.38-49. ⟨10.1093/ve/veab070⟩ Article dans une revue hal-04995475v1
	Current challenges to virus discovery by meta-transcriptomics Joanna C.A. Cobbin , Justine Charon , Erin Harvey , Edward Holmes , Jackie E. Mahar Current Opinion in Virology, 2021, 51, pp.48-55. ⟨10.1016/j.coviro.2021.09.007⟩ Article dans une revue hal-04995464v1
	Spectroscopic Investigation of the Kinetic Mechanism Involved in the Association of Potyviral VPg with the Host Plant Translation Initiation Factor eIF4E Jocelyne Walter , Amandine Barra , Justine Charon , Genevieve Tavert-Roudet , Thierry Michon International Journal of Molecular Sciences, 2020, 21 (16), pp.5618. ⟨10.3390/ijms21165618⟩ Article dans une revue hal-02914077v1
	Metatranscriptomic Identification of Diverse and Divergent RNA Viruses in Green and Chlorarachniophyte Algae Cultures Justine Charon , Vanessa Rossetto Marcelino , Richard Wetherbee , Heroen Verbruggen , Edward Holmes Viruses, 2020, 12 (10), pp.1180. ⟨10.3390/v12101180⟩ Article dans une revue hal-04995478v1
	Novel RNA viruses associated with Plasmodium vivax in human malaria and Leucocytozoon parasites in avian disease Justine Charon , Matthew Grigg , John-Sebastian Eden , Kim Piera , Hafsa Rana et al. PLoS Pathogens, 2019, 15 (12), pp.e1008216. ⟨10.1371/journal.ppat.1008216⟩ Article dans une revue hal-04995472v1
	Comparative analysis of mutational robustness of the intrinsically disordered viral protein VPg and of its interactor eIF4E. Jocelyne Walter , Justine Charon , Yihua Hu , Joy Lachat , Thomas Leger et al. PLoS ONE, 2019, 14 (2), pp.e0211725. ⟨10.1371/journal.pone.0211725⟩ Article dans une revue hal-02628650v1
	Hydrodynamic Behavior of the Intrinsically Disordered Potyvirus Protein VPg, of the Translation Initiation Factor eIF4E and of their Binary Complex Jocelyne Walter , Amandine Barra , Bénédicte Doublet , Nicolas Ceré , Justine Charon et al. International Journal of Molecular Sciences, 2019, 20 (7), pp.1794. ⟨10.3390/ijms20071794⟩ Article dans une revue hal-02623838v1
	Using the Bacterial Ribosome as a Discovery Platform for Peptide-Based Antibiotics Justine Charon , Aitor Manteca , C. Axel Innis Biochemistry, 2018, 58 (2), pp.75-84. ⟨10.1021/acs.biochem.8b00927⟩ Article dans une revue hal-04995483v1
	First experimental assessment of protein intrinsic disorder involvement in an RNA virus natural adaptive process. Justine Charon , Amandine Barra , Jocelyne J. Walter , Pauline Millot , Eugénie Hébrard et al. Molecular Biology and Evolution, 2018, 35 (1), pp.38-49. ⟨10.1093/molbev/msx249⟩ Article dans une revue hal-01614825v1
	Dissecting the biochemical and transcriptomic effects of a locally applied heat treatment on developing Cabernet Sauvignon grape berries Fatma Ouaked-Lecourieux , Christian Kappel , Philippe Pieri , Justine Charon , Jérémy Pillet et al. Frontiers in Plant Science, 2017, 8, pp.1-23. ⟨10.3389/fpls.2017.00053⟩ Article dans une revue hal-01602655v1
	Protein intrinsic disorder within the Potyvirus genus: from proteome-wide analysis to functional annotation. Justine Charon , Sébastien Theil , Valerie Nicaise , Thierry Michon Molecular BioSystems, 2016, 12, pp.634-652. ⟨10.1039/c5mb00677e⟩ Article dans une revue hal-02630928v1
	VvGOLS1 and VvHsfA2 are Involved in the Heat Stress Responses in Grapevine Berries Jérémy Pillet , Aurélie Egert , Philippe Pieri , Fatma Lecourieux , Christian Kappel et al. Plant and Cell Physiology, 2012, 53 (10), pp.1776-1792. ⟨10.1093/pcp/pcs121⟩ Article dans une revue hal-02346821v1

	Effect of mutations in intrinsically-disordered or ordered regions of potato virus Y (PVY ; genus Potyvirus ; family Potyviridae) VPg on virus fitness and adaptability Guillaume Dubrulle , Guillaume Lafforgue , Justine Charon , Amandine Barra , Marion Szadkowski et al. 20. Rencontres de virologie végétale (RVV 2025), Jan 2025, Aussois, France Communication dans un congrès hal-05147646v1
	Assessment of the viral protein VPg intrinsic disorder contribution to the Potato virus Y adaptation to eIF4E-mediated resistance of pepper (Capsicum annuum) Justine Charon , Amandine Barra , Jocelyne Walter , Vincent Simon , Benoît Moury et al. 16. Rencontres de Virologie Végétale (RVV 2017), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (CIRAD). FRA., Jan 2017, Aussois, France. 137 p Communication dans un congrès hal-01608795v1
	Characterization of intrinsic disorder involvement in potyvirus adaptation using PVY/Pepper pathosystem as model Justine Charon , Jocelyne J. Walter , Amandine Barra , Benoît Moury , Eugénie Hébrard et al. 15. Rencontres de Virologie Végétale (RVV), Jan 2015, Aussois, France Communication dans un congrès hal-02738981v1
	Structural basis of the interaction between potyviral VPg and the plant resistance factor eIF4E : evidences for an a-helix induced folding upon association Jocelyne J. Walter , Amandine Barra , Justine Charon , Bénédicte Doublet , Thierry Michon 15. Rencontres de Virologie Végétale (RVV), Jan 2015, Aussois, France. 1 p Communication dans un congrès hal-02793436v1
	Direct impact of high temperature on Cabernet Sauvignon berries development and metabolism David Lecourieux , Jérémy Pillet , Fatma Lecourieux , Christian Kappel , Philippe Pieri et al. Plant Biology 2013 – ASPB, Jul 2013, Providence, United States Communication dans un congrès hal-02804186v1
	Direct impact of high temperature on the grapevine berry proteome Fatma Lecourieux , Christian Kappel , Philippe Pieri , Justine Charon , Eric Gomes et al. EuPA Scientific Meeting, Oct 2013, Saint-Malo, France Communication dans un congrès hal-02805666v1

	Contribution of Intrinsically Disordered Regions to the Interaction between the Potyviral Protein VPg and the Plant Translation Initiation Factor eIF4E Jocelyne Walter , Amandine Barra , Bénédicte Doublet , Nicolas Cerré , Justine Charon et al. 16. Rencontres de Virologie Végétale (RVV 2017), Jan 2017, Aussois, France. 2017 Poster de conférence hal-01605586v1
	Mutational robustness of intrinsically disordered proteins: a comparative study between the potyvirus intrinsically disordered VPg and the plant susceptibility factor eIF4E Jocelyne Walter , Justine Charon , Mamadou Dialo , Yihua Hu , Joy Lachat et al. 16. Rencontres de Virologie Végétale (RVV 2017), Jan 2017, Aussois, France. 2017 Poster de conférence hal-01605266v1
	Direct impact of high temperatures on grapevine berry development: a merge transcriptomic, proteomic and metabolomic survey Fatma Lecourieux , C. Kappel , Philippe Pieri , Justine Charon , Jérémy Pillet et al. ClimWine 2016 (Sustainable grape and wine production in the context of climate change), Apr 2016, Bordeaux, France. , 152 p., 2016, Sustainable grape and wine production in the context of climate change. Book of abstracts Poster de conférence hal-02742045v1
	Domain mapping of the interaction between potyvirus VPg and plant elF4E Jocelyne J. Walter , Vanessa Mangin , Justine Charon , Amandine Barra , Bénédicte Doublet et al. 15. Rencontres de Virologie Végétale (RVV), Jan 2015, Aussois, France. 1 p., 2015 Poster de conférence hal-02792038v1
	Experimental data on the interactions between a viral pre-molten globule (VPg) and an eukaryotic translation initiation factor (eIF4E) Thierry Michon , Amandine Barra , Justine Charon , Eugénie Hébrard , Sonia Longhi et al. Gordon Research Conference on Intrinsically Disordered Proteins, Jul 2014, Easton, United States. 2014 Poster de conférence hal-02800019v1
	An attempt to experimentally assess the contribution of intrinsic disorder to the virus adaptation Justine Charon , Amandine Barra , Eugénie Hébrard , Sonia Longhi , Benoît Moury et al. Gordon Research Seminar on Intrinsically Disordered Proteins, Jul 2014, Easton, United States. 2014 Poster de conférence hal-02792931v1
	Direct impact of high temperature on Cabernet Sauvignon berries development and metabolism David Lecourieux , Jérémy Pillet , Fatma Lecourieux , Christian Kappel , Philippe Pieri et al. 9. International Symposium on Grapevine Physiology and Biotechnology, Apr 2013, La Serena, Chile. 2013 Poster de conférence hal-02804455v1
	Intrinsic disorder of viral proteins, mutational robustness and host adaptation using the potyviral VPg as a reporter Justine Charon , Benoît Moury , Thierry Michon 14. Rencontres de Virologie Végétale, Jan 2013, Aussois, France. 2013 Poster de conférence hal-02748825v1

	RdRpCATCH: A unified resource for RNA virus discovery using viral RNA-dependent RNA polymerase profile Hidden Markov models Dimitris Karapliafis , Uri Neri , Ingrida Olendraite , Justine Charon , Shoichi Sakaguchi et al. 2026 Pré-publication, Document de travail hal-05522991v2

	Contribution du désordre intrinsèque des protéines aux fonctions impliquées dans le cycle viral et l'évolution adaptative des virus à ARN : étude appliquée au genre modèle Potyvirus Justine Charon Biologie végétale. Université de Bordeaux, 2015. Français. ⟨NNT : 2015BORD0373⟩ Thèse tel-01456446v1

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Justine CHARON

Publications

Publications

Consensus statement from the second RdRp Summit: towards a unified framework for RNA virus biology

Mapping the global distribution and spread of the Plasmodium vivax -associated virus MaRNAV-1

Viral replication modulated by hallmark conformational ensembles: how AlphaFold-predicted features of RdRp folding dynamics combined with intrinsic disorder-mediated function enable RNA virus discovery

Consensus statement from the first RdRp Summit: advancing RNA virus discovery at scale across communities

A virus associated with the zoonotic pathogen Plasmodium knowlesi causing human malaria is a member of a diverse and unclassified viral taxon

Human land use impacts viral diversity and abundance in a New Zealand river

Diverse RNA Viruses Associated with Diatom, Eustigmatophyte, Dinoflagellate, and Rhodophyte Microalgae Cultures

Meta-transcriptomics reveals potential virus transfer between Aedes communis mosquitoes and their parasitic water mites

RdRp-scan: A bioinformatic resource to identify and annotate divergent RNA viruses in metagenomic sequence data

Analysis of the Contribution of Intrinsic Disorder in Shaping Potyvirus Genetic Diversity

Revealing RNA virus diversity and evolution in unicellular algae transcriptomes

Current challenges to virus discovery by meta-transcriptomics

Spectroscopic Investigation of the Kinetic Mechanism Involved in the Association of Potyviral VPg with the Host Plant Translation Initiation Factor eIF4E

Metatranscriptomic Identification of Diverse and Divergent RNA Viruses in Green and Chlorarachniophyte Algae Cultures

Novel RNA viruses associated with Plasmodium vivax in human malaria and Leucocytozoon parasites in avian disease

Comparative analysis of mutational robustness of the intrinsically disordered viral protein VPg and of its interactor eIF4E.

Hydrodynamic Behavior of the Intrinsically Disordered Potyvirus Protein VPg, of the Translation Initiation Factor eIF4E and of their Binary Complex

Using the Bacterial Ribosome as a Discovery Platform for Peptide-Based Antibiotics

First experimental assessment of protein intrinsic disorder involvement in an RNA virus natural adaptive process.

Dissecting the biochemical and transcriptomic effects of a locally applied heat treatment on developing Cabernet Sauvignon grape berries

Protein intrinsic disorder within the Potyvirus genus: from proteome-wide analysis to functional annotation.

VvGOLS1 and VvHsfA2 are Involved in the Heat Stress Responses in Grapevine Berries

Effect of mutations in intrinsically-disordered or ordered regions of potato virus Y (PVY ; genus Potyvirus ; family Potyviridae) VPg on virus fitness and adaptability

Assessment of the viral protein VPg intrinsic disorder contribution to the Potato virus Y adaptation to eIF4E-mediated resistance of pepper (Capsicum annuum)

Characterization of intrinsic disorder involvement in potyvirus adaptation using PVY/Pepper pathosystem as model

Structural basis of the interaction between potyviral VPg and the plant resistance factor eIF4E : evidences for an a-helix induced folding upon association

Direct impact of high temperature on Cabernet Sauvignon berries development and metabolism

Direct impact of high temperature on the grapevine berry proteome

Contribution of Intrinsically Disordered Regions to the Interaction between the Potyviral Protein VPg and the Plant Translation Initiation Factor eIF4E

Mutational robustness of intrinsically disordered proteins: a comparative study between the potyvirus intrinsically disordered VPg and the plant susceptibility factor eIF4E

Direct impact of high temperatures on grapevine berry development: a merge transcriptomic, proteomic and metabolomic survey

Domain mapping of the interaction between potyvirus VPg and plant elF4E

Experimental data on the interactions between a viral pre-molten globule (VPg) and an eukaryotic translation initiation factor (eIF4E)

An attempt to experimentally assess the contribution of intrinsic disorder to the virus adaptation

Direct impact of high temperature on Cabernet Sauvignon berries development and metabolism

Intrinsic disorder of viral proteins, mutational robustness and host adaptation using the potyviral VPg as a reporter

RdRpCATCH: A unified resource for RNA virus discovery using viral RNA-dependent RNA polymerase profile Hidden Markov models

Contribution du désordre intrinsèque des protéines aux fonctions impliquées dans le cycle viral et l'évolution adaptative des virus à ARN : étude appliquée au genre modèle Potyvirus