Jean-Baptiste Lamy

142

Documents

Publications

LLM-Based Extraction of Clinical Practice Guidelines into Structured Arguments

Robin Blouin , Karima Sedki , Jean-Baptiste Lamy

Studies in Health Technology and Informatics, 2026, Studies in Health Technology and Informatics, 338, pp.31-35. ⟨10.3233/SHTI260790⟩

Article dans une revue hal-05709881v1

Assessing the Concordance Between LLM-Based ICD-10 Coding and a Drug Database for Antihypertensive Drug Contraindications: A Weighted Inter-Rater Agreement Study

Samya Adrouji , Abdelmalek Mouazer , Jean-Baptiste Lamy

Studies in Health Technology and Informatics, 2026, Studies in Health Technology and Informatics, ⟨10.3233/SHTI260902⟩

Article dans une revue hal-05709884v1

Argumentation-Based Framework Selection for Clinical Decision Support

Nada Boudegzdame , Karima Sedki , Jean-Baptiste Lamy

Studies in Health Technology and Informatics, 2025, Studies in Health Technology and Informatics, 327, pp.118-122. ⟨10.3233/SHTI250285⟩

Article dans une revue hal-05346381v1

Simulation Trials for Evaluating Clinical Decision Support Systems

Jean-Baptiste Lamy , Hector Falcoff , Sophie Dubois , Pierre Meneton , Rosy Tsopra et al.

Studies in Health Technology and Informatics, 2025, Studies in Health Technology and Informatics, ⟨10.3233/SHTI250304⟩

Article dans une revue hal-05090294v1

A simulation trial evaluating ABiMed, a clinical decision support system for medication reviews and polypharmacy management

Abdelmalek Mouazer , Sophie Dubois , Romain Léguillon , Nada Boudegzdame , Thibaud Levrard et al.

Research in Social and Administrative Pharmacy, 2025, 21 (11), pp.904-913. ⟨10.1016/j.sapharm.2025.06.006⟩

Article dans une revue hal-05130379v1

ABiMed: An intelligent and visual clinical decision support system for medication reviews and polypharmacy management

Abdelmalek Mouazer , Romain Léguillon , Nada Boudegzdame , Thibaud Levrard , Yoann Le Bars et al.

BMC Medical Informatics and Decision Making, 2025, 25 (1), pp.173. ⟨10.1186/s12911-025-03002-x⟩

Article dans une revue hal-05090292v1

Correction: ABiMed: An intelligent and visual clinical decision support system for medication reviews and polypharmacy management

Abdelmalek Mouazer , Romain Léguillon , Nada Boudegzdame , Thibaud Levrard , Yoann Le Bars et al.

BMC Medical Informatics and Decision Making, 2025, 25 (1), pp.362. ⟨10.1186/s12911-025-03219-w⟩

Article dans une revue hal-05377655v1

Correction: Adaptive questionnaires for facilitating patient data entry in clinical decision support systems: methods and application to STOPP/ START v2

Jean-Baptiste Lamy , Abdelmalek Mouazer , Romain Léguillon , Romain Lelong , Stéfan Darmoni et al.

BMC Medical Informatics and Decision Making, 2025, 25 (1), pp.361. ⟨10.1186/s12911-025-03218-x⟩

Article dans une revue hal-05728788v1

An Intelligent and Visual Clinical Decision Support System for Medication Reconciliation at Admission in a Hospital Setting

Rory Schofield , Jean-Baptiste Lamy

Studies in Health Technology and Informatics, 2025, Studies in Health Technology and Informatics, 332, pp.103-107. ⟨10.3233/SHTI251505⟩

Article dans une revue hal-05346361v1

From Guidelines to Code: Formalizing STOPP/START Criteria Using LLMs and RAG for Clinical Decision Support

Samya Adrouji , Abdelmalek Mouazer , Jean-Baptiste Lamy

Studies in Health Technology and Informatics, 2025, Studies in Health Technology and Informatics, 332, pp.42-46. ⟨10.3233/SHTI251492⟩

Article dans une revue hal-05346333v1

Learning preferences in Qualitative Choice Logic and some of its variants: an application for antibiotics recommendations

Karima Sedki , Jean Baptiste Lamy , Rosy Tsopra

Journal of Applied Non-Classical Logics, In press, pp.1-38. ⟨10.1080/11663081.2025.2518838⟩

Article dans une revue hal-05343124v1

Impact on clinical guideline adherence of Orient-COVID, a clinical decision support system based on dynamic decision trees for COVID19 management: A randomized simulation trial with medical trainees

Mouin Jammal , Antoine Saab , Cynthia Abi Khalil , Charbel Mourad , Rosy Tsopra et al.

International Journal of Medical Informatics, 2025, 195, pp.105772. ⟨10.1016/j.ijmedinf.2024.105772⟩

Article dans une revue hal-04855598v1

Supporting Pharmacist-GP Collaboration in Medication Review Using Argumentation

Nada Boudegzdame , Karima Sedki , Jean-Baptiste Lamy

Studies in Health Technology and Informatics, 2024, Studies in Health Technology and Informatics, ⟨10.3233/SHTI241062⟩

Article dans une revue hal-05346431v1

Original Strategy for Verbatim Collecting Knowledge from Mostly-Illiterate and Secretive Experts: West Africa Traditional Medicine’s Case

Appoh Kouamé , Jean-Baptiste Lamy , Kroa Ehoulé

International journal of advanced computer science and applications (IJACSA), 2024, 15 (7), ⟨10.14569/IJACSA.2024.01507120⟩

Article dans une revue hal-05346399v1

Enhancing Healthcare Informatics: Integrating Category Theory Reasoning into OMOP-CDM Ontology Model

Rodrigo Albarran , Jean-Baptiste Lamy

Studies in Health Technology and Informatics, 2024, Studies in Health Technology and Informatics, 316, pp.1427-1431. ⟨10.3233/SHTI240680⟩

Article dans une revue hal-05346444v1

Adaptive questionnaires for facilitating patient data entry in clinical decision support systems: methods and application to STOPP/START v2

Jean-Baptiste Lamy , Abdelmalek Mouazer , Romain Léguillon , Romain Lelong , Stéfan J. Darmoni et al.

BMC Medical Informatics and Decision Making, 2024, 24 (1), pp.326. ⟨10.1186/s12911-024-02742-6⟩

Article dans une revue hal-04804872v1

Model and Strategy for Predicting and Discovering Drug-Drug Interactions

Abdelmalek Mouazer , Nada Boudegzdame , Karima Sedki , Rosy Tsopra , Jean-Baptiste Lamy

Studies in Health Technology and Informatics, 2023, Studies in Health Technology and Informatics, ⟨10.3233/SHTI230248⟩

Article dans une revue hal-04162795v1

Decision-support systems for managing polypharmacy in the elderly: A scoping review

Abdelmalek Mouazer , Rosy Tsopra , Karima Sedki , Catherine Letord , Jean-Baptiste Lamy

Journal of Biomedical Informatics, 2022, pp.104074. ⟨10.1016/j.jbi.2022.104074⟩

Article dans une revue hal-03651749v1

Automated Clinical Practice Guideline Recommendations for Hereditary Cancer Risk Using Chatbots and Ontologies: System Description

Jordon Ritchie , Lewis Frey , Jean-Baptiste Lamy , Cecelia Bellcross , Heath Morrison et al.

JMIR Cancer, 2022, 8 (1), pp.e29289. ⟨10.2196/29289⟩

Article dans une revue hal-04013640v1

Early Prediction of All-Cause Clinical Deterioration in General Wards Patients: Development and Validation of a Biomarker-Based Machine Learning Model Derived From Rapid Response Team Activations

Antoine Saab , Cynthia Abi Khalil , Mouin Jammal , Melody Saikali , Jean-Baptiste Lamy

Journal of Patient Safety, 2022, 18 (6), pp.578-586. ⟨10.1097/PTS.0000000000001069⟩

Article dans une revue hal-04013628v1

ABiMed: Towards an Innovative Clinical Decision Support System for Medication Reviews and Polypharmacy Management

Abdelmalek Mouazer , Romain Leguillon , Bertille Leroy , Karima Sedki , Christian Simon et al.

Studies in Health Technology and Informatics, 2022, Informatics and Technology in Clinical Care and Public Health, 289, pp.61-64. ⟨10.3233/SHTI210859⟩

Article dans une revue hal-03738935v1

Visual Comparison of Guidelines: Method and Application to Potentially Inappropriate Medication Lists

Abdelmalek Mouazer , Karima Sedki , Rosy Tsopra , Jean-Baptiste Lamy

Studies in Health Technology and Informatics, 2021, 281, pp.248-252. ⟨10.3233/shti210158⟩

Article dans une revue hal-03479325v1

Preliminary Qualitative and Quantitative Evaluation of DESIREE, a Decision Support Platform for the Management of Primary Breast Cancer Patients.

Sylvia Pelayo , Jacques Bouaud , Claudia Blancafort , Jean-Baptiste Lamy , Booma Devi Sekar et al.

AMIA .. Annual Symposium proceedings [electronic resource] / AMIA Symposium. AMIA Symposium., 2021, 2020, pp.1012-1021

Article dans une revue hal-03648858v1

A data science approach to drug safety: Semantic and visual mining of adverse drug events from clinical trials of pain treatments

Jean-Baptiste Lamy

Artificial Intelligence in Medicine, 2021, pp.102074. ⟨10.1016/j.artmed.2021.102074⟩

Article dans une revue hal-03201049v1

AntibioGame® A serious game for teaching medical students about antibiotic use

Rosy Tsopra , Mélanie Courtine , Karima Sedki , David Eap , Manon Cabal et al.

International Journal of Medical Informatics, 2020, 136, pp.104074. ⟨10.1016/j.ijmedinf.2020.104074⟩

Article dans une revue hal-02440631v1

Explainable decision support through the learning and visualization of preferences from a formal ontology of antibiotic treatments

Jean-Baptiste Lamy , Karima Sedki , Rosy Tsopra

Journal of Biomedical Informatics, 2020, 104, pp.103407. ⟨10.1016/j.jbi.2020.103407⟩

Article dans une revue hal-02532851v1

An Approach Based on Preference Learning for Identifying Experts Reasoning in Antibiotic Treatment.

Karima Sedki , Chaymae Lakrafli , Jean-Baptiste Lamy , Rosy Tsopra

Studies in Health Technology and Informatics, 2020, 272, pp.115-118. ⟨10.3233/SHTI200507⟩

Article dans une revue hal-03738891v1

Identifying Experts Reasoning in Antibiotic Treatment with Preference Learning

Karima Sedki , Chaymae Lakrafli , Jean-Baptiste Lamy , Rosy Tsopra

Studies in Health Technology and Informatics, 2020, 270, pp.1313-1314. ⟨10.3233/SHTI200418⟩

Article dans une revue hal-02887395v1

RainBio: Proportional visualization of large sets in biology

Jean-Baptiste Lamy , Rosy Tsopra

IEEE Transactions on Visualization and Computer Graphics, 2020, 26 (11), pp.3285-3298. ⟨10.1109/TVCG.2019.2921544⟩

Article dans une revue hal-02264217v1

Limits and Variability in Drug Databases: Lessons Learnt from Drug Comparisons

Jean-Baptiste Lamy , Hélène Berthelot , Madeleine Favre , Rosy Tsopra

Studies in Health Technology and Informatics, 2020, 270, pp.1329-1330. ⟨10.3233/SHTI200426⟩

Article dans une revue hal-02887401v1

Implementation of an ontological reasoning to support the guideline-based management of primary breast cancer patients in the DESIREE project

Jacques Bouaud , Sylvia Pelayo , Jean-Baptiste Lamy , Coralie Prebet , Charlotte Ngo et al.

Artificial Intelligence in Medicine, 2020, 108, pp.101922. ⟨10.1016/j.artmed.2020.101922⟩

Article dans une revue hal-02969742v1

How to interact with medical terminologies? Formative usability evaluations comparing three approaches for supporting the use of MedDRA by pharmacovigilance specialists

Romaric Marcilly , Laura Douze , Sébastien Ferré , Bissan Audeh , Carlos Bobed et al.

BMC Medical Informatics and Decision Making, 2020, 20 (1), pp.261. ⟨10.1186/s12911-020-01280-1⟩

Article dans une revue hal-02972457v1

Visualization of Drug Interactions for Supporting Medication Review.

Abdelmalek Mouazer , Karima Sedki , Rosy Tsopra , Jean-Baptiste Lamy

Studies in Health Technology and Informatics, 2020, 272, pp.107-110. ⟨10.3233/SHTI200505⟩

Article dans une revue hal-03738890v1

Helping GPs to extrapolate guideline recommendations to patients for whom there are no explicit recommendations, through the visualization of drug properties. The example of AntibioHelp® in bacterial diseases

Rosy Tsopra , Karima Sedki , Mélanie Courtine , Hector Falcoff , Antoine de Beco et al.

Journal of the American Medical Informatics Association, 2019, 26 (10), pp.1010 - 1019. ⟨10.1093/jamia/ocz057⟩

Article dans une revue hal-03479057v1

Visualizing undirected graphs and symmetric square matrices as overlapping sets

Jean-Baptiste Lamy

Multimedia Tools and Applications, 2019, ⟨10.1007/s11042-019-7655-8⟩

Article dans une revue hal-02264236v1

Somatic Mitochondrial Mutations in Oral Cavity Cancers among Senegalese Patients

Silly Toure , Fatimata Mbaye , Mame Diarra Gueye , Malick Fall , Ahmadou Dem et al.

Asian Pacific Journal of Cancer Prevention, 2019, 20 (7), pp.2203-2208. ⟨10.31557/APJCP.2019.20.7.2203⟩

Article dans une revue hal-02501563v1

Explainable artificial intelligence for breast cancer: A visual case-based reasoning approach

Jean-Baptiste Lamy , Boomadevi Sekar , Gilles Guezennec , Jacques Bouaud , Brigitte Séroussi

Artificial Intelligence in Medicine, 2019, 94, pp.42-53. ⟨10.1016/j.artmed.2019.01.001⟩

Article dans une revue hal-01998052v1

Une plateforme multimodale d’aide à la décision. Application à la prise en charge du cancer du sein dans le cadre du projet DESIREE

Brigitte Seroussi , Jean-Baptiste Lamy , Coralie Prebet , Charlotte Ngo , Luis Teixeira et al.

Revue des Sciences et Technologies de l'Information - Série TSI : Technique et Science Informatiques, 2018, 37 (1), pp.11-38. ⟨10.3166/tsi37-0001⟩

Article dans une revue hal-03901326v1

Using preference learning for detecting inconsistencies in clinical practice guidelines: Methods and application to antibiotherapy

Rosy Tsopra , Jean-Baptiste Lamy , Karima Sedki

Artificial Intelligence in Medicine, In press, 89, pp.24-33. ⟨10.1016/j.artmed.2018.04.013⟩

Article dans une revue hal-01849868v1

Combining semantic and lexical methods for mapping MedDRA to VCM icons

Jean-Baptiste Lamy , Rosy Tsopra

Studies in Health Technology and Informatics, 2018, 247, pp.905-909

Article dans une revue hal-01803759v1

Case-Based Decision Support System for Breast Cancer Management

Booma Devi Sekar , Jean-Baptiste Lamy , Nekane Larburu , Brigitte Séroussi , Gilles Guezennec et al.

International Journal of Computational Intelligence Systems, 2018, 12 (1), pp.28-38. ⟨10.2991/ijcis.2018.25905180⟩

Article dans une revue hal-02289438v1

Building a Knowledge-Based Tool for Auto-Assessing the Cardiovascular Risk

Adrien Ugon , Amel Imene Hadj Bouzid , Marie-Christine Jaulent , Madeleine Favre , Catherine Duclos et al.

Studies in Health Technology and Informatics, 2018, 247, pp.735-739. ⟨10.3233/978-1-61499-852-5-735⟩

Article dans une revue hal-01803761v1

Implementing Guideline-Based, Experience-Based, and Case-Based Approaches to Enrich Decision Support for the Management of Breast Cancer Patients in the DESIREE Project.

B Seroussi , Jb Lamy , N Muro , N Larburu , Bd Sekar et al.

Studies in Health Technology and Informatics, 2018, 255, pp.190-194

Article dans une revue hal-02489264v1

Owlready: Ontology-oriented programming in Python with automatic classification and high level constructs for biomedical ontologies

Jean-Baptiste Lamy

Artificial Intelligence in Medicine, 2017, 80, pp.11 - 28. ⟨10.1016/j.artmed.2017.07.002⟩

Article dans une revue hal-01592746v1

Rainbow boxes: A new technique for overlapping set visualization and two applications in the biomedical domain

Jean-Baptiste Lamy , Hélène Berthelot , Coralie Capron , Madeleine Favre

Journal of Visual Languages and Computing, 2017, 43, pp.71 - 82. ⟨10.1016/j.jvlc.2017.09.003⟩

Article dans une revue hal-01653329v1

Using visual analytics for presenting comparative information on new drugs

Jean-Baptiste Lamy , Hélène Berthelot , Madeleine Favre , Adrien Ugon , Catherine Duclos et al.

Journal of Biomedical Informatics, 2017, ⟨10.1016/j.jbi.2017.04.019⟩

Article dans une revue hal-01527283v1

Design of a Visual Interface for Comparing Antibiotics Using Rainbow Boxes

Rosy Tsopra , Shérazade Kinouani , Alain Venot , Marie-Christine Jaulent , Catherine Duclos et al.

Studies in Health Technology and Informatics, 2017, 235, pp.529-533. ⟨10.3233/978-1-61499-753-5-529⟩

Article dans une revue hal-03479067v1

Reconciliation of multiple guidelines for decision support: a case study on the multidisciplinary management of breast cancer within the DESIREE project.

B Séroussi , G Guézennec , Jb Lamy , N Muro , N Larburu et al.

AMIA .. Annual Symposium proceedings [electronic resource] / AMIA Symposium. AMIA Symposium., 2017, 2017, pp.1527-1536

Article dans une revue hal-02489249v1

Formalization of the semantics of iconic languages: An ontology-based method and four semantic-powered applications

Jean-Baptiste Lamy , Lina F. Soualmia

Knowledge-Based Systems, 2017, 135, pp.159 - 179. ⟨10.1016/j.knosys.2017.08.011⟩

Article dans une revue hal-01592749v1

Formalisation de la sémantique des langages iconiques

Jean-Baptiste F Lamy , Lina F. Soualmia , Catherine F Duclos , Alain F Venot

Revue des Sciences et Technologies de l'Information - Série RIA : Revue d'Intelligence Artificielle, 2016, 30 (5), pp.579-606. ⟨10.3166/RIA.30.579-606⟩

Article dans une revue hal-01574366v1

Design and usability study of an iconic user interface to ease information retrieval of medical guidelines

Nicolas Griffon , Gaétan Kerdelhué , Saliha Hamek , Sylvain Hassler , César Boog et al.

Journal of the American Medical Informatics Association, 2015, 21 (e2), pp.e270-277. ⟨10.1136/amiajnl-2012-001548⟩

Article dans une revue hal-01084123v1

PyMedTermino: an open-source generic API for advanced terminology services.

Jean-Baptiste Lamy , Alain Venot , Catherine Duclos

Studies in Health Technology and Informatics, 2015, 210, pp.924-8

Article dans une revue hal-03650024v1

Toward a formalization of the process to select IMIA Yearbook best papers.

Jb Lamy , B Séroussi , N Griffon , G Kerdelhué , Mc Jaulent et al.

Methods of information in medicine, 2015, 54, pp.135-44

Article dans une revue hal-02489147v1

Abstractive Summarization of Drug Dosage Regimens for Supporting Drug Comparison.

Adrien Ugon , Hélène Berthelot , Alain Venot , Madeleine Favre , Catherine Duclos et al.

Studies in Health Technology and Informatics, 2015, 213, pp.79-82

Article dans une revue hal-03650023v1

Evaluating alignment quality between iconic language and reference terminologies using similarity metrics.

Nicolas Griffon , Gaetan Kerdelhué , Lina Soualmia , Tayeb Merabti , Julien Grosjean et al.

BMC Medical Informatics and Decision Making, 2014, 14 (1), pp.17. ⟨10.1186/1472-6947-14-17⟩

Article dans une revue inserm-00980903v1

Using an iconic language to improve access to electronic medical records in general medicine.

Christian Simon , Sylvain Hassler , Marie-Catherine Beuscart-Zephir , Madeleine Favre , Alain Venot et al.

Studies in Health Technology and Informatics, 2014, 205, pp.333-7

Article dans une revue hal-03650028v1

A 2014 medical informatics perspective on clinical decision support systems: do we hit the ceiling of effectiveness?

J Bouaud , Jb Lamy

Yearbook of medical informatics, 2014, 9, pp.163-6

Article dans une revue hal-02489161v1

A Preference-based framework for medical decision making.

K Sedki , C Duclos , J Lamy

Studies in Health Technology and Informatics, 2014, 205, pp.63-7

Article dans une revue hal-03810495v1

Improving access to clinical practice guidelines with an interactive graphical interface using an iconic language

Suzanne Pereira , Sylvain Hassler , Saliha Hamek , César Boog , Nicolas Leroy et al.

BMC Medical Informatics and Decision Making, 2014, 14, pp.77. ⟨10.1197/jamia.M2398⟩

Article dans une revue inserm-01101481v1

Validating the semantics of a medical iconic language using ontological reasoning.

Jean-Baptiste Lamy , Lina F Soualmia , Gaëtan Kerdelhué , Alain Venot , Catherine Duclos

Journal of Biomedical Informatics, 2013, 46 (1), pp.56-67. ⟨10.1016/j.jbi.2012.08.006⟩

Article dans une revue hal-00845359v1

A medical informatics perspective on clinical decision support systems. Findings from the yearbook 2013 section on decision support.

J Bouaud , Jb Lamy , Support Section Editors For The Imia Yearbook Section On Decision

Yearbook of medical informatics, 2013, 8, pp.128-31

Article dans une revue hal-02489164v1

A semi-automatic semantic method for mapping SNOMED CT concepts to VCM Icons.

Jean-Baptiste Lamy , Rosy Tsopra , Alain Venot , Catherine Duclos

Studies in Health Technology and Informatics, 2013, 192, pp.42-6

Article dans une revue hal-00912881v1

Validating the semantics of a medical iconic language using ontological reasoning.

Jean-Baptiste Lamy , Lina F Soualmia , Gaëtan Kerdelhué , Alain Venot , Catherine Duclos

Journal of Biomedical Informatics, 2013, 46 (1), pp.56-67. ⟨10.1016/j.jbi.2012.08.006⟩

Article dans une revue hal-00912880v1

Comparing the use of SNOMED CT and ICD10 for coding clinical conditions to implement laboratory guidelines.

Mobin Yasini , Vahid Ebrahiminia , Catherine Duclos , Alain Venot , Jean-Baptiste Lamy

Studies in Health Technology and Informatics, 2013, 186, pp.200-4

Article dans une revue hal-03810513v1

A guideline-derived model to facilitate the implementation of test-ordering rules within a hospital information system.

Mobin Yasini , Catherine Duclos , Alain Venot , Eric Lepage , Jean-Baptiste Lamy

Studies in Health Technology and Informatics, 2013, 192, pp.719-23

Article dans une revue hal-03810507v1

A medical informatics perspective on clinical decision support systems. Findings from the yearbook 2013 section on decision support.

Jacques Bouaud , Jean-Baptiste Lamy

Yearb Med Inform, 2013, 8 (1), pp.128-31

Article dans une revue inserm-00881027v1

A semi-automatic semantic method for mapping SNOMED CT concepts to VCM Icons.

Jean-Baptiste Lamy , Rosy Tsopra , Alain Venot , Catherine Duclos

Studies in Health Technology and Informatics, 2013, 192, pp.42-6

Article dans une revue hal-03738762v1

Langage iconique et interfaces interactives en médecine : application aux dossiers patients, guides de bonnes pratiques et moteurs de recherche médicaux

J.-B. Lamy , M.-C. Beuscart-Zéphir , C. Boog , S. Darmoni , M. Favre et al.

Innovation and Research in BioMedical engineering, 2012, 33 (2), pp.129-136. ⟨10.1016/j.irbm.2012.01.016⟩

Article dans une revue istex hal-03811251v1

Design of an original interface that facilitates the use of clinical practice guidelines of infection by physicians in primary care.

Rosy Tsopra , Jean-Baptiste Lamy , Alain Venot , Catherine Duclos

Studies in Health Technology and Informatics, 2012, 180, pp.93-7

Article dans une revue hal-03738758v1

Design of an original interface that facilitates the use of clinical practice guidelines of infection by physicians in primary care.

Rosy Tsopra , Jean-Baptiste Lamy , Alain Venot , Catherine Duclos

Studies in Health Technology and Informatics, 2012, 180, pp.93-7

Article dans une revue hal-03810535v1

A generic system for critiquing physicians' prescriptions: usability, satisfaction and lessons learnt.

Jb Lamy , V Ebrahiminia , B Seroussi , J Bouaud , C Simon et al.

Studies in Health Technology and Informatics, 2011, 169, pp.125-9

Article dans une revue hal-02489173v1

Facilitating access to laboratory guidelines by modeling their contents and designing a computerized user interface.

Mobin Yasini , Catherine Duclos , Jean-Baptiste Lamy , Alain Venot

Studies in Health Technology and Informatics, 2011, 169, pp.487-91

Article dans une revue hal-03810542v1

A generic system for critiquing physicians' prescriptions: usability, satisfaction and lessons learnt.

Jean-Baptiste Lamy , Vahid Ebrahiminia , Brigitte Seroussi , Jacques Bouaud , Christian Simon et al.

Studies in Health Technology and Informatics, 2011, 169, pp.125-9

Article dans une revue hal-00912884v1

How to translate therapeutic recommendations in clinical practice guidelines into rules for critiquing physician prescriptions? Methods and application to five guidelines.

Jean-Baptiste Lamy , Vahid Ebrahiminia , Christine Riou , Brigitte Seroussi , Jacques Bouaud et al.

BMC Medical Informatics and Decision Making, 2010, 10 (1), pp.31. ⟨10.1186/1472-6947-10-31⟩

Article dans une revue inserm-00668456v1

How to translate therapeutic recommendations in clinical practice guidelines into rules for critiquing physician prescriptions? Methods and application to five guidelines.

Jb Lamy , V Ebrahiminia , C Riou , B Seroussi , J Bouaud et al.

BMC Medical Informatics and Decision Making, 2010, 10, pp.31

Article dans une revue hal-02489176v1

Towards iconic language for patient records, drug monographs, guidelines and medical search engines.

Jean-Baptiste Lamy , Catherine Duclos , Saliha Hamek , Marie-Catherine Beuscart-Zéphir , Gaetan Kerdelhué et al.

Studies in Health Technology and Informatics, 2010, 160 (Pt 1), pp.156-60

Article dans une revue hal-03810547v1

Développement et étude d’impact d’un système informatique de tableaux de bord pour le suivi des pathologies chroniques en médecine générale

H Falcoff , O Benainous , F Gillaizeau , M Favre , C Simon et al.

Pratiques et Organisation des Soins, 2009, 40, pp.177-189

Article dans une revue hal-02489231v1

Design of a graphical and interactive interface for facilitating access to drug contraindications, cautions for use, interactions and adverse effects

Jean-Baptiste Lamy , Alain Venot , Avner Bar-Hen , Patrick Ouvrard , Catherine Duclos

BMC Medical Informatics and Decision Making, 2008, 8 (1), pp.21. ⟨10.1186/1472-6947-8-21⟩

Article dans une revue hal-03810551v1

Use of the C4.5 machine learning algorithm to test a clinical guideline-based decision support system.

Jean-Baptiste Lamy , Anis Ellini , Vahid Ebrahiminia , Jean-Daniel Zucker , Hector Falcoff et al.

Studies in Health Technology and Informatics, 2008, 136, pp.223-8

Article dans une revue hal-00912885v1

An iconic language for the graphical representation of medical concepts.

Jean-Baptiste Lamy , Catherine Duclos , Avner Bar-Hen , Patrick Ouvrard , Alain Venot

BMC Medical Informatics and Decision Making, 2008, 8 (1), pp.16. ⟨10.1186/1472-6947-8-16⟩

Article dans une revue hal-00279981v1

Which Graphical Approaches should be Used to Represent Medical Knowledge?

Jean-Baptiste Lamy , Catherine Duclos , Vincent Rialle , Alain Venot

Studies in Health Technology and Informatics, 2005, 116, pp.719-24

Article dans une revue hal-03810557v1

Telemonitoring of patients at home: a software agent approach.

Vincent Rialle , Jean Baptiste Lamy , Norbert Noury , Lionel Bajolle

Computer Methods and Programs in Biomedicine, 2003, 72 (3), pp.257-68. ⟨10.1016/S0169-2607(02)00161-X⟩

Article dans une revue istex hal-00201205v1

Oral Presentation / Scientific Work Medication review among elderly polymedicated patients : the contribution of ABIMED, a digital online platform

Hector Falcoff , Abdelmalek Mouazer , Sophie Dubois , Jean-Baptiste Lamy

Equip, May 2025, Linz (AUSTRIA), Austria

Communication dans un congrès hal-05667725v1

Discover ABiMed, an online digital platform to help doctors and pharmacists improve the safety and quality of medications among elderly polymedicated patients

Hector Falcoff , Jean-Baptiste Lamy , Sophie Dubois , Thibault Triconnet

Equip, May 2025, Linz (AUSTRIA), Austria

Communication dans un congrès hal-05667718v1

SMOTE: Are We Learning to Classify or to Detect Synthetic Data?

Nada Boudegzdame , Karima Sedki , Rosy Tsopra , Jean-Baptiste Lamy

16th International Conference on Agents and Artificial Intelligence, Feb 2024, Rome, France. pp.283-290, ⟨10.5220/0012325300003636⟩

Communication dans un congrès hal-05358939v1

An Approach for Improving Oversampling by Filtering out Unrealistic Synthetic Data

Nada Boudegzdame , Karima Sedki , Rosy Tspora , Jean-Baptiste Lamy

ICAART 2024 - 16th International Conference on Agents and Artificial Intelligence, Feb 2024, Rome, France. pp.291-298, ⟨10.5220/0012325400003636⟩

Communication dans un congrès hal-05346463v1

Fisheye Visualization and Multi-Path Trees for Presenting Clinical Practice Guidelines: Methods and Application to Covid-19

Jean-Baptiste Lamy , Mouin Jammal , Melody Saikali , Charbel Mourad , Cynthia Abi Khalil et al.

2023 27th International Conference Information Visualisation (IV), Jul 2023, Tampere, France. pp.37-42, ⟨10.1109/IV60283.2023.00017⟩

Communication dans un congrès hal-05346657v1

SMOTE: Apprenons-nous à classifier ou à prédire la nature synthétique des données ?

Nada Boudegzdame , Karima Sedki , Rosy Tsopra , Jean-Baptiste Lamy

Rencontres des Jeunes Chercheurs en Intelligence Artificielle (RJCIA), Jul 2023, Strasbourg, France

Communication dans un congrès hal-05346479v1

Learning Preferences in Lexicographic Choice Logic

Karima Sedki , Nada Boudegzdame , Jean-Baptiste Lamy , Rosy Tsopra

ICAART 2023 - 15th International Conference on Agents and Artificial Intelligence, Feb 2023, Lisbonne, Portugal. pp.1012-1019, ⟨10.5220/0011891300003393⟩

Communication dans un congrès hal-04162803v1

Qualitative Choice Logic For Modeling Experts Recommendations of Antibiotics

Karima Sedki , Jean-Baptiste Lamy , Rosy Tsopra

The International FLAIRS Conference Proceedings, 2022, Hutchinson Island, United States

Communication dans un congrès hal-04013675v1

A Qualitative Method for Learning Medical Expert Reasoning

Karima Sedki , Jean-Baptiste Lamy , Rosy Tsopra

MEDINFO 2021 - 18th World Congress on Medical and Health Informatics, Oct 2021, Virtual, France. pp.645-649, ⟨10.3233/SHTI220157⟩

Communication dans un congrès hal-03738956v1

ABiMed: Towards an innovative clinical decision support system for medication reviews and polypharmacy management

Abdelmalek Mouazer , Romain Leguillon , Bertille Leroy , Karima Sedki , Christian Simon et al.

ICIMTH, 2021, Athène, Greece

Communication dans un congrès hal-03479318v1

Translating the Observational Medical Outcomes Partnership - Common Data Model (OMOP-CDM) electronic health records to an OWL ontology

Jean-Baptiste Lamy , Abdelmalek Mouazer , Karima Sedki , Rosy Tsopra

MEDINFO 2021 - 18th World Congress of Medical and Health Informatics, Oct 2021, Online, France

Communication dans un congrès hal-03479322v1

Intelligence artificielle explicable pour le cancer du sein : Une approche visuelle de raisonnement à partir de cas

Jean-Baptiste Lamy , Boomadevi Sekar , Gilles Guezennec , Jacques Bouaud , Brigitte Séroussi

Extraction et Gestion des Connaissances (EGC), 2020, Bruxelles, Belgique

Communication dans un congrès hal-03479312v1

Visualization of potential drug synergies

Jean-Baptiste Lamy

International Conference on Informatics, Management and Technology in Healthcare, Jul 2020, Athen, Greece

Communication dans un congrès hal-02968276v1

Comparison of four visual analytics techniques for the visualization of adverse drug event rates in clinical trials

Jean-Baptiste Lamy

International Conference Information Visualisation, Sep 2020, Vienna, Austria. pp.344-349, ⟨10.1109/IV51561.2020.00063⟩

Communication dans un congrès hal-02968289v1

Learning Preferences in Prioritized Qualitative Choice Logic

Karima Sedki , Jean-Baptiste Lamy , Rosy Tsopra

32nd IEEE International Conference on Tools with Artificial Intelligence, ICTAI 2020., Nov 2020, Baltimore, MD, United States. pp.368-375

Communication dans un congrès hal-03951742v1

Visualization of drug interactions for supporting medication review

Abdelmalek Mouazer , Karima Sedki , Rosy Tsopra , Jean-Baptiste Lamy

International Conference on Informatics, Management and Technology in Healthcare, Jul 2020, Athen, Greece

Communication dans un congrès hal-02968284v1

Combiner arbres phylogénétiques et visualisation d'ensembles

Jean-Baptiste Lamy , Flora Jay

Atelier Visualisation d'informations, interaction et fouille de données, Jan 2020, Bruxelles, Belgique

Communication dans un congrès hal-02968296v1

Comparison of Machine Learning Algorithms for Classifying Adverse-Event Related 30-ay Hospital Readmissions: Potential Implications for Patient Safety

Antoine Saab , Melody Saikali , Jean-Baptiste Lamy

ICIMTH, 2020, Athène, Greece. ⟨10.3233/SHTI200491⟩

Communication dans un congrès hal-03479291v1

Iconic Visualization of Sickle Cell Patients Current and Past Health Status

Al Hassim Diallo , Gaoussou Camara , Moussa Lo , Ibrahima Diagne , Jean-Baptiste Lamy

ICIMTH, 2020, Athène, Greece. ⟨10.3233/SHTI200496⟩

Communication dans un congrès hal-03479297v1

Visual Representation of African Traditional Medicine Recipes Using Icons and a Formal Ontology, ontoMEDTRAD

Appoh Kouame , Konan Marcellin Brou , Moussa Lo , Jean-Baptiste Lamy

MIE, 2020, Genève, Switzerland. ⟨10.3233/SHTI200269⟩

Communication dans un congrès hal-03479307v1

SIMENS-LIS4SC, a Laboratory Information System for Biological Tests of Sickle Cell Screening and Healthcare

Al Hassim Diallo , Gaoussou Camara , Jean-Baptiste Lamy , Moussa Lo , Ibrahima Diagne et al.

MEDINFO, 2019, Lyon, France. ⟨10.3233/SHTI190295⟩

Communication dans un congrès hal-03479237v1

Proportional Visualization of Genotypes and Phenotypes with Rainbow Boxes: Methods and Application to Sickle Cell Disease

Al Hassim Diallo , Gaoussou Camara , Moussa Lo , Ibrahima Diagne , Jean-Baptiste Lamy

2019 23rd International Conference Information Visualisation (IV), Jul 2019, Paris, France. pp.1-6, ⟨10.1109/IV.2019.00010⟩

Communication dans un congrès hal-03479276v1

Apprentissage de préférences à partir d'une ontologie formelle : méthodes et application en antibiothérapie

Jean-Baptiste Lamy , Karima Sedki , Rosy Tsopra

Ingénierie des Connaissances (IC), Jul 2019, Toulouse, France

Communication dans un congrès hal-02264221v1

Visual explanation of simple neural networks using interactive rainbow boxes

Jean-Baptiste Lamy , Rosy Tsopra

23rd International Conference Information Visualisation (iV), Jul 2019, Paris, France

Communication dans un congrès hal-02264225v1

An iconic approach to the browsing of medical terminologies

Jean-Baptiste Lamy , Van Bui Thuy , Agnès Lillo-Le Louët , Cédric Bousquet

MEDINFO, 2019, Lyon, France

Communication dans un congrès hal-03479242v1

Dynamic software visualization of quantum algorithms with rainbow boxes

Jean-Baptiste Lamy

International Conference on Information Visualization Theory and Applications (IVAPP), 2019, Prague, Czech Republic. ⟨10.5220/0007247801550163⟩

Communication dans un congrès hal-02264243v1

Towards an Information System for Sickle Cell Neonatal Screening in Senegal

Al Hassim Diallo , Gaoussou Camara , Jean-Baptiste Lamy , Moussa Lo , Ibrahima Diagne et al.

STC, 2019, Hanover, Germany. ⟨10.3233/978-1-61499-959-1-95⟩

Communication dans un congrès hal-03479249v1

Hierarchical visual case-based reasoning for supporting breast cancer therapy

Jean-Baptiste Lamy , Boomadevi Sekar , Gilles Guezennec , Jacques Bouaud , Brigitte Séroussi

2019 Fifth International Conference on Advances in Biomedical Engineering (ICABME), Oct 2019, Tripoli, Lebanon. pp.1-4, ⟨10.1109/ICABME47164.2019.8940223⟩

Communication dans un congrès hal-03479269v1

Intelligent Clinical Decision Support Systems for Patient-Centered Healthcare in Breast Cancer Oncology

Boomadevi Sekar , Jean-Baptiste Lamy , Naiara Muro , Amaia Ugarriza Pinedo , Brigitte Seroussi et al.

2018 IEEE 20th International Conference on e-Health Networking, Applications and Services (Healthcom), Sep 2018, Ostrava, France. pp.1-6, ⟨10.1109/HealthCom.2018.8531128⟩

Communication dans un congrès hal-03479209v1

A new diagram for amino acids: User study comparing rainbow boxes to Venn/Euler diagram

Jean-Baptiste Lamy

Information Visualization, Jul 2018, Salerno, Italy

Communication dans un congrès hal-01849808v1

Visualizing symmetric square matrices with rainbow boxes: methods and application to character co-occurrence matrices in literary texts

Jean-Baptiste Lamy

International Conference Information Visualisation (iV), Jul 2018, Salerno, Italy

Communication dans un congrès hal-01849813v1

Raisonnement à partir de cas visuel : méthodes et application au traitement du cancer du sein

Jean-Baptiste Lamy , Boomadevi Sekar , Gilles Guezennec , Jacques Bouaud , Brigitte Séroussi

Visualisation d'informations, interaction et fouille de données, 2018, Paris, France

Communication dans un congrès hal-03479226v1

Une plate-forme visuelle pour une information comparative sur les nouveaux médicaments

Jean-Baptiste Lamy , Adrien Ugon , Catherine Duclos , Alain Venot , Madeleine Favre et al.

Ingénierie des Connaissances (IC), Jul 2017, Caen, France

Communication dans un congrès hal-01558576v1

Translating visually the reasoning of a perceptron: the weighted rainbow boxes technique and an application in antibiotherapy

Jean-Baptiste Lamy , Rosy Tsopra

21st International Conference Information Visualisation (IV 2017), Jul 2017, Londres, United Kingdom

Communication dans un congrès hal-01562972v1

Les oiseaux picorant artificiels : une nouvelle méta-heuristique inspirée du comportement des pigeons

Jean-Baptiste Lamy

Journées d'Intelligence Artificielle Fondamentale (JIAF), Jul 2017, Caen, France

Communication dans un congrès hal-01558577v1

Les boîtes arc-en-ciel : une nouvelle technique pour visualiser les relations d'instanciation dans les ontologies et son application à la comparaison des propriétés des médicaments

Jean-Baptiste Lamy , Hélène Berthelot , Madeleine Favre

Conférence Nationale en Intelligence Artificielle (CNIA), Jun 2016, Clermont-Ferrand, France

Communication dans un congrès hal-01348436v1

Automatic Extraction of Drug Adverse Effects from Product Characteristics (SPCs): A Text Versus Table Comparison

Jean-Baptiste Lamy , Adrien Ugon , Hélène Berthelot

HEC 2016, Aug 2016, Munich, Germany. pp.339-343, ⟨10.3233/978-1-61499-678-1-339⟩

Communication dans un congrès hal-01363986v1

Les boîtes arc-en-ciel : une nouvelle technique pour visualiser les relations d'instanciation dans les ontologies et son application à la comparaison des propriétés des médicaments

Jean-Baptiste Lamy , Hélène Berthelot , Madeleine Favre

Conférence Nationale en Intelligence Artificielle, Jun 2016, Clermont Ferrand, France

Communication dans un congrès hal-01558578v1

Vers un système iconique d'aide à la décision pour les praticiens de la médecine traditionnelle

Appoh Kouame , Konan Marcellin Brou , Moussa Lo , Jean Baptiste Lamy

COLLOQUE AFRICAIN SUR LA RECHERCHE EN INFORMATIQUE ET EN MATHÉMATIQUES APPLIQUÉES (CARI 2016), Oct 2016, Hammamet, Tunisie

Communication dans un congrès hal-03491875v1

Rainbow boxes: a technique for visualizing overlapping sets and an application to the comparison of drugs properties

Jean-Baptiste Lamy , Hélène Berthelot , Madeleine Favre

International Conference Information Visualisation 2016, Jul 2016, Lisbonne, Portugal

Communication dans un congrès hal-01348434v1

Ontopy : programmation orientée ontologie en Python

Jean-Baptiste Lamy , Hélène Berthelot

IC2015, Jun 2015, Rennes, France

Communication dans un congrès hal-01168286v1

Comparaison et visualisation des contre-indications des médicaments

Jean-Baptiste Lamy , Adrien Ugon , Madeleine Favre , Catherine Duclos , Alain Venot et al.

3ème Symposium Ingénierie de l’Information Médicale (SIIM 2015), Jun 2015, Rennes, France

Communication dans un congrès hal-01168293v1

General linear models for group studies in diffusion tensor imaging

A. Bouchon , V. Noblet , F. Heitz , J. Lamy , F. Blanc et al.

11th International Symposium on Biomedical Imaging (ISBI), Apr 2014, Beijing, China. pp.1339 - 1342, ⟨10.1109/ISBI.2014.6868100⟩

Communication dans un congrès hal-05403733v1

Validation de la sémantique d'un langage iconique médical à l'aide d'une ontologie : méthodes et applications

Jean-Baptiste Lamy , Lina F Soualmia , Alain Venot , Catherine Duclos

IC - 25èmes Journées francophones d'Ingénierie des Connaissances, May 2014, Clermont-Ferrand, France. pp.51-62

Communication dans un congrès hal-01004802v1

De l'analyse d'un corpus de texte à la conception d'une interface graphique facilitant l'accès aux connaissances sur le mé́dicament

Jean-Baptiste Lamy , Catherine Duclos , Alain Venot

IC2009, 2009, Hammamet, Tunisie. pp.265-276

Communication dans un congrès hal-00377329v1

Using ontology-driven decision support for hereditary cancer risk assessment.

JB Ritchie , L Frey , Jean-Baptiste Lamy , H Morrison , BM Welch

AMIA 2019 Annual Symposium, Nov 2019, Washington (DC), United States

Poster de conférence hal-04013744v1

Ontologies with Python

Jean-Baptiste Lamy

Apress, 2021, ⟨10.1007/978-1-4842-6552-9⟩

Ouvrages hal-03479030v1

Python et les ontologies

Jean-Baptiste Lamy

2019

Ouvrages hal-03479263v1

Speak-PIM, Towards a Framework for the Automatic Detection of Potentially Inappropriate Prescriptions

Abdelmalek Mouazer , Karima Sedki , Rosy Tsopra , Jean-Baptiste Lamy

Challenges of Trustable AI and Added-Value on Health, 294, IOS Press, pp.460-464, 2022, Studies in Health Technology and Informatics, ⟨10.3233/SHTI220501⟩

Chapitre d'ouvrage hal-03738951v1

Translating the Observational Medical Outcomes Partnership – Common Data Model (OMOP-CDM) Electronic Health Records to an OWL Ontology

Jean-Baptiste Lamy , Abdelmalek Mouazer , Karima Sedki , Rosy Tsopra

MEDINFO 2021: One World, One Health – Global Partnership for Digital Innovation, 290, IOS Press, pp.76-80, 2022, Studies in Health Technology and Informatics, ⟨10.3233/SHTI220035⟩

Chapitre d'ouvrage hal-03738953v1

Artificial Feeding Birds (AFB): a new metaheuristic inspired by the behavior of pigeons

Jean-Baptiste Lamy

Advances in nature-inspired computing and applications, 2019, ⟨10.1007/978-3-319-96451-5_3⟩

Chapitre d'ouvrage hal-02264232v1

A Visual Decision Support System for Helping Physicians to Make A decision on New Drugs

Jean-Baptiste Lamy , Adrien Ugon , Hélène Berthelot , Madeleine Favre

Decision Support Systems VII. Data, information and knowledge visualization in decision support systems, 282, , pp.3-15, 2017, Lecture Notes in Business Information Processing, ⟨10.1007/978-3-319-57487-5_1⟩

Chapitre d'ouvrage hal-01573568v1