Jean-Christophe Palauqui

63
Documents

Présentation

Professional background

1999-Present: INRAE Researcher, Institut J-P Bourgin, Versailles (France)

1998-1999: Post-doctoral Fellow. Sainsbury Lab, John Innes Centre, Norwich (UK). BBSRC 1998. PI: D. Baulcombe

1994-1998: PhD in Plant Molecular Biology, Institu J-P Bourgin, Versailles (France). PI: H. Vaucheret

Publications

Publications

M2WISH : An easy and efficient protocol for whole‐mount mRNA in situ hybridization that allows 3D cell resolution of gene expression in Arabidopsis thaliana

Liudmila Chelysheva , Halima Morin , Eric Biot , Antoine Nicolas , Philippe Rech et al.

The Plant Journal, 2024, ⟨10.1111/tpj.16792⟩

Article dans une revue hal-04644422v1
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TreeJ: an ImageJ plugin for interactive cell lineage reconstruction from static images

Elise Laruelle , Jean-Christophe Palauqui , Philippe Andrey , Alain Trubuil

Plant Methods, 2023, 19, pp.128. ⟨10.1186/s13007-023-01106-x⟩

Article dans une revue hal-04398556v1
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Large-scale analysis and computer modeling reveal hidden regularities behind variability of cell division patterns in Arabidopsis thaliana embryogenesis

Elise Laruelle , Katia Belcram , Alain Trubuil , Jean-Christophe Palauqui , Philippe Andrey

eLife, 2022, 11, pp.e79224. ⟨10.7554/eLife.79224⟩

Article dans une revue hal-04301574v1
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BdERECTA controls vasculature patterning and phloem-xylem organization in Brachypodium distachyon

Kaori Sakai , Sylvie Citerne , Sébastien Antelme , Philippe Le Bris , Sylviane Daniel et al.

BMC Plant Biology, 2021, 21 (1), pp.196. ⟨10.1186/s12870-021-02970-2⟩

Article dans une revue hal-03222326v1
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Cell geometry determines symmetric and asymmetric division plane selection in Arabidopsis early embryos

Julien Moukhtar , Alain Trubuil , Katia Belcram , David Legland , Zhor Khadir et al.

PLoS Computational Biology, 2019, 15 (2), pp.e1006771. ⟨10.1371/journal.pcbi.1006771⟩

Article dans une revue hal-02393309v1
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Design of a comprehensive microfluidic and microscopic toolbox for the ultra-wide spatio-temporal study of plant protoplasts development and physiology

Kaori Sakai , Florence Charlot , Thomas Le Saux , Sandrine Bonhomme , Fabien Nogué et al.

Plant Methods, 2019, 15 (1), ⟨10.1186/s13007-019-0459-z⟩

Article dans une revue hal-02309578v2

OCTOPUS Negatively Regulates BIN2 to Control Phloem Differentiation in Arabidopsis thaliana

Pauline Anne , Marianne Azzopardi , Lionel Gissot , Sébastien Beaubiat , Kian Hematy et al.

Current Biology, 2015, 25 (19), pp.2584 - 2590. ⟨10.1016/j.cub.2015.08.033⟩

Article dans une revue hal-01536504v1

The vasculature complexity and connectivity gene encodes a plant-specific protein required for embryo provasculature development

Hannetz Roschzttardtz , Julio Paez-Valencia , Tejaswi Dittakavi , Sathya Jali , Francisca C Reyes et al.

Plant Physiology, 2014, 166 (2), pp.889-902. ⟨10.1104/pp.114.246314⟩

Article dans une revue hal-02631141v1
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Independent and interactive effects of DOF affecting germination 1 (DAG1) and the Della proteins GA insensitive (GAI) and Repressor of ga1-3 (RGA) in embryo development and seed germination.

Alessandra Boccaccini , Silvia Santopolo , Davide Capauto , Riccardo Lorrai , Emanuele Minutello et al.

BMC Plant Biology, 2014, 14, pp.200. ⟨10.1186/s12870-014-0200-z⟩

Article dans une revue pasteur-01182911v1

Modeling of plant embryo morphodynamics at early developmental stages

S.V. S. Nikolaev , N. A. N. A. Kolchanov , S. K. S. K. Golushko , Jean-Christophe J.-C. Palauqui , Aurélie A. Urban et al.

Russian Journal of Genetics: Applied Research, 2013, 3 (3), pp.176-183. ⟨10.1134/S207905971303009X⟩

Article dans une revue hal-01001000v1

OCTOPUS, a polarly localised membrane-associated protein, regulates phloem differentiation entry in Arabidopsis thaliana

Elisabeth Truernit , Helene Baub , Katia Belcram , Julien Barthélémy , Jean-Christophe Palauqui

Development (Cambridge, England), 2012, 139 (7), pp.1306 - 1315. ⟨10.1242/dev.072629⟩

Article dans une revue hal-01003441v1

Genome-wide binding-site analysis of REVOLUTA reveals a link between leaf patterning and light-mediated growth responses

Ronny R. Brandt , Merce M. Salla-Martret , Jordi J. Bou-Torrent , Thomas T. Musielak , Mark M. Stahl et al.

The Plant Journal, 2012, 72 (1), pp.31 - 42. ⟨10.1111/j.1365-313X.2012.05049.x⟩

Article dans une revue hal-01004523v1

ATHB4 and HAT3, two class II HD-ZIP transcription factors, control leaf development in Arabidopsis

Jordi Bou-Torrent , Merce Salla-Martret , Ronny Brandt , Thomas Musielak , Jean-Christophe Palauqui et al.

Plant Signaling and Behavior, 2012, 7 (11), pp.1382-1387. ⟨10.4161/psb.21824⟩

Article dans une revue hal-01204162v1

Phyllotaxis: In Search of the Golden Angle

Jean-Christophe J.-C. Palauqui , Patrick P. Laufs

Current Biology, 2011, 21 (13), pp.R502 - R504. ⟨10.1016/j.cub.2011.05.054⟩

Article dans une revue hal-01004329v1
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Very-long-chain fatty acids are required for cell plate formation during cytokinesis in Arabidopsis thaliana

Liên Bach , Lionel Gissot , Jessica Marion , Frédérique Tellier , Patrick Moreau et al.

Journal of Cell Science, 2011, 124 (19), pp.3223-3234. ⟨10.1242/jcs.074575⟩

Article dans une revue hal-00855927v1
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Sphingolipids containing very-long-chain fatty acids define a secretory pathway for specific polar plasma membrane protein targeting in Arabidopsis.

Jonathan E Markham , Diana Molino , Lionel Gissot , Yannick Bellec , Kian Hématy et al.

The Plant cell, 2011, 23 (6), pp.2362-78. ⟨10.1105/tpc.110.080473⟩

Article dans une revue hal-00855942v1
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Very-long-chain fatty acids are involved in polar auxin transport and developmental patterning in Arabidopsis

François Roudier , Lionel Gissot , Frédéric Beaudoin , Richard Haslam , Louise V. Michaelson et al.

The Plant cell, 2010, 22 (2), pp.364-375. ⟨10.1105/tpc.109.071209⟩

Article dans une revue hal-00856101v1
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NOF1 encodes an arabidopsis protein involved in the control of rRNA expression

Erwana Harscoet , Bertrand Dubreucq , Jean-Christophe Palauqui , Loic Lepiniec

PLoS ONE, 2010, 5 (9), pp.e12829. ⟨10.1371/journal.pone.0012829⟩

Article dans une revue hal-01203890v1
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High-contrast three-dimensional imaging of the Arabidopsis leaf enables the analysis of cell dimensions in the epidermis and mesophyll.

Nathalie Wuyts , Jean-Christophe Palauqui , Geneviève Conejero , Jean-Luc Verdeil , Christine Granier et al.

Plant Methods, 2010, 6, pp.17. ⟨10.1186/1746-4811-6-17⟩

Article dans une revue hal-00508435v1

Looking deeper: whole-mount confocal imaging of plant tissue for the accurate study of inner tissue layers.

Elisabeth Truernit , Jean-Christophe Palauqui

Plant Signaling and Behavior, 2009, 4 (2), pp.151-152. ⟨10.4161/psb.4.2.7683⟩

Article dans une revue hal-02657732v1

High-resolution whole-mount imaging of three-dimensional tissue organization and gene expression enables the study of Phloem development and structure in Arabidopsis.

Elisabeth Truernit , Hélène Bauby , Bertrand Dubreucq , Olivier Grandjean , John Runions et al.

The Plant cell, 2008, 20 (6), pp.1494-1503. ⟨10.1105/tpc.107.056069⟩

Article dans une revue hal-02663189v1

Protophloem differentiation in early Arabidopsis thaliana development

Hélène Bauby , Fanchon Divol , Elisabeth Truernit , Olivier Grandjean , Jean-Christophe J.-C. Palauqui

Plant and Cell Physiology, 2007, 48 (1), pp.97-109

Article dans une revue hal-02655495v1

Alterations in sphingolipid synthesis in the model plant Arabidopsis thaliana is associated with cell polarity and developmental defects

François Roudier , Lionel L. Gissot , Julien Vignard , Christine Rochat , Patrick Moreau et al.

Chemistry and Physics of Lipids, 2006, 143 (1-2), pp.100

Article dans une revue hal-02657873v1

Systemic response to aphid infestation by Mycus persicae in the phloem of Apium graveolens

Fanchon Divol , Francoise F. Vilaine , S. Thibivilliers , Joelle J. Amselem , Jean-Christophe J.-C. Palauqui et al.

Plant Molecular Biology, 2005, 57 (4), pp.517-540. ⟨10.1007/s11103-005-0338-z⟩

Article dans une revue istex hal-02682711v1

Diversity of the superfamily of phloems lectins (Phloem protein 2) in angiosperms

Sylvie Dinant , A.M. Clark , Y. Zhu , Francoise F. Vilaine , Jean-Christophe J.-C. Palauqui et al.

Plant Physiology, 2003, 131, pp.114-128

Article dans une revue hal-02679214v1

Towards deciphering phloem : a transcriptome analysis of the phloem of Apium graveolens

Françoise Vilaine , Jean-Christophe Palauqui , J. Amselem , Chantal Zusiak , Rémi Lemoine et al.

The Plant Journal, 2003, 36, pp.67-81. ⟨10.1046/j.1365-313X.2003.01855.x⟩

Article dans une revue hal-00096795v1

Les macromolécules transportées dans le phloème

Jean-Christophe J.-C. Palauqui

Comptes Rendus de l'Académie d'Agriculture de France, 2002, 88 (8), pp.69-77

Article dans une revue hal-02674534v1

Activation of systemic acquired silencing by localised introduction of DNA

Jean-Christophe Palauqui , Sandrine Balzergue

Current Biology, 1999, 9 (2), pp.59-66. ⟨10.1016/S0960-9822(99)80016-5⟩

Article dans une revue hal-02694052v1

Transgene-induced gene silencing in plants

Herve H. Vaucheret , Christophe Beclin , Taline T. Elmayan , C. Godon , J.B. Morel et al.

The Plant Journal, 1998, 16 (6), pp.651-659

Article dans une revue hal-02694449v1

Arabidopsis mutants impaired in cosuppression

Taline T. Elmayan , Sandrine Balzergue , F. Béon , V. Bourdon , J. Daubremet et al.

The Plant cell, 1998, 10, pp.1747-1757

Article dans une revue hal-02687808v1

Infection of Tobacco or Arabidopsis plants by CMV counteracts systemic post-transcriptional silencing of nonviral (trans)genes

Christophe Beclin , R. Berthomé , Jean-Christophe J.-C. Palauqui , Mark M. Tepfer , Herve H. Vaucheret

Virology, 1998, 252, pp.313-317

Article dans une revue hal-02693464v1

Transgenes are dispensable for the RNA degradation step of cosuppression

Jean-Christophe J.-C. Palauqui , Herve H. Vaucheret

Proceedings of the National Academy of Sciences of the United States of America, 1998, 95, pp.9675-9680

Article dans une revue hal-02686361v1

Infection of Tobacco or Arabidopsis Plants by CMV Counteracts Systemic Post-transcriptional Silencing of Nonviral (Trans)Genes

Christophe Béclin , Richard Berthomé , Jean-Christophe Palauqui , Mark Tepfer , Hervé Vaucheret

Virology, 1998, 252 (2), pp.313-317. ⟨10.1006/viro.1998.9457⟩

Article dans une revue hal-03741531v1

Nitrate reductase and nitrite reductase as targets to study gene silencing phenomena in transgenic plants

Herve H. Vaucheret , Jean-Christophe J.-C. Palauqui , P. Mourrain , Taline T. Elmayan

Euphytica, 1997, 00, pp.195-200

Article dans une revue hal-02683732v1

Systemic acquired silencing : transgene-specific post-transcriptional silencing is transmitted by grafting from silenced stocks to non-silenced scions

Jean-Christophe J.-C. Palauqui , Taline T. Elmayan , J.M. Pollien , Herve H. Vaucheret

EMBO Journal, 1997, 16 (15), pp.4738-4745

Article dans une revue hal-02693816v1

A transcriptionally active state is required for post-transcriptional silencing (cosuppression) of nitrate reductase host genes and transgenes.

Herve H. Vaucheret , Laurent Nussaume , Jean-Christophe J.-C. Palauqui , Isabelle I. Quillere , Taline T. Elmayan

The Plant cell, 1997, 9, pp.1495-1504

Article dans une revue hal-02689537v1

Contrôle épigénétique des (trans)gènes chez les plantes supérieures

Herve H. Vaucheret , Christophe Beclin , Taline T. Elmayan , P. Mourain , Jean-Christophe J.-C. Palauqui et al.

Comptes rendus des séances de la Société de biologie et de ses filiales, 1997, 191 (2), pp.161-163

Article dans une revue hal-02692401v1

Frequencies, timing, and spatial patterns of co-suppression of nitrate reductase and nitrite reductase in transgenic tobacco plants

Jean-Christophe J.-C. Palauqui , Taline T. Elmayan , F. Dorlhac de Borne , P. Crete , Cyril Charles et al.

Plant Physiology, 1996, 112, pp.1447-1456

Article dans une revue hal-02688248v1

Field trial analysis of nitrate reductase co-suppression: a comparative study of 38 combinations of transgene loci

Jean-Christophe J.-C. Palauqui , Herve H. Vaucheret

Plant Molecular Biology, 1995, 29, pp.149-159

Article dans une revue hal-02708779v1

Molecular and genetic analysis of nitrite reductase co-suppression in transgenic tobacco plants

Herve H. Vaucheret , Jean-Christophe J.-C. Palauqui , Taline T. Elmayan , B. Moffatt

Molecular and General Genetics MGG, 1995, 248, pp.311-317

Article dans une revue hal-02713839v1

Deciphering cell division patterns in plant early embryogenesis by combining 3D image analysis and computer modelling

Elise Laruelle , Julien Moukhtar , Alain Trubuil , Katia Belcram , David Legland et al.

Plant Growth and Form: International Symposium on Quantitative Plant Morphodynamics, Sep 2019, Heidelberg, Germany

Communication dans un congrès hal-02786917v1

Combining 3D image analysis and computer modeling to understand cell division patterns in plant early embryogenesis

Julien Moukhtar El Demerdache , Elise Laruelle , Alain Trubuil , Katia Belcram , David Legland et al.

Quantitative BioImaging Conference, Jan 2019, Rennes, France

Communication dans un congrès hal-02791564v1

Cellular determinants of early embryo development : seeing what is hidden

Jean-Denis Faure , Jean-Christophe J.-C. Palauqui

The Seed Biology Paris Summer School, Jul 2015, Paris, France

Communication dans un congrès hal-01528027v1

Computational modelling of cell division patterns during plant early embryogenesis

Julien Moukhtar , Katia Belcram , Alain Trubuil , David Legland , Jean-Christophe Palauqui et al.

International Workshop on Image Analysis Methods for the Plant Sciences (IAMPS), Sep 2015, Louvain-la-Neuve, Belgium

Communication dans un congrès hal-02795769v1

On 3D reconstruction and lineage of Arabidopsis embryos from a collection of fixed samples

Aurelie A. Urbain , Jean-Christophe J.-C. Palauqui , S.V. S. Nikolaev , N.A. N. Kolchanov , Alain Trubuil

EMBO Confererence Series, Morphogenesis and Dynamics of Multicellular Systems, Sep 2012, Heidelberg, Germany. pp.1

Communication dans un congrès hal-01001051v1

Systemic response to aphid infestation by Myzus persicae in the phloem of apuim graveolens

Fanchon Divol , Françoise Vilaine , Sandra Thibivilliers , Joëlle Amselem , Jean-Cristophe Palauqui et al.

congrès SEB, Jul 2005, Paris, France

Communication dans un congrès hal-02913051v1

Transcriptome analysis of the phloem in the plant response to virus, bacteria or fungi pathogens

Sandra Thibivilliers , Fanchon Divol , Francoise F. Vilaine , Joëlle Amselem , Rachid Aaziz et al.

Journées thématiques SFBV, Apr 2004, Poitiers, France

Communication dans un congrès hal-02913043v1

New insights on phloem processes provided by transcriptome analysis

Sylvie S. Dinant , Fanchon Divol , Sandra Thibivilliers , Joelle J. Amselem , Jean-Christophe Palauqui et al.

Journées thématiques SFBV, Apr 2004, Poitiers, France

Communication dans un congrès hal-02913040v1

identification of markers involved in the differenciation of phloem in arabidopsis thaliana

Hélène Bauby , Sylvie Dinant , Francoise Vilaine , Georges Pelletier , Jean-Christophe Palauqui

Phloem, Aug 2003, Bayreuth, Germany

Communication dans un congrès hal-02913037v1

Phloem transcriptome analysis

Rémi Lemoine , Lucie Landouar-Arsivaud , Laurence Maurousset , Françoise Vilaine , Jean-Christophe Palauqui et al.

International Conférence on Phloem Transport, Aug 2003, Bayreuth, Germany

Communication dans un congrès hal-00107932v1

Transcriptome analysis of the phloem of in the plant response to aphid feeding

Fanchon Divol , Francoise F. Vilaine , Sandra Thibivilliers , Joelle J. Amselem , Jean-Christophe Palauqui et al.

Phloem, Aug 2003, Bayreuth, Germany

Communication dans un congrès hal-02913028v1

a transcriptome analysis of the phloem in the plant response to aphis feeding

Fanchon Divol , Francoise F. Vilaine , Jean-Christophe Palauqui , Sylvie S. Dinant

Colloque Genoplante, Oct 2003, Poitiers, France

Communication dans un congrès hal-02912998v1

Toward phloem deciphering : a transcriptome analysis of the phloem of apium graveolens in arabidopsis thaliana

Francoise Vilaine , Jean-Christophe Palauqui , Joëlle Amselem , Chantal Kusiak , Rémi Lemoine et al.

Phloem, Aug 2003, Bayreuth, Germany

Communication dans un congrès hal-02913035v1

Plant defense response in the phloem of Celery upon aphid infestation

Fanchon Divol , Jean-Christophe Palauqui , Francoise F. Vilaine , Rachid Aaziz , B. Maba et al.

Colloque génoplante, Oct 2001, Poitiers, France

Communication dans un congrès hal-02912993v1

Unravelling the macromolecular movement through plasmodesmata

Rachid Aaziz , Jean-Christophe Palauqui , Francoise Vilaine , Rémi Lemoine , Sylvie Dinant

Quatrième colloque généralde la Société Française de Physiologie végétale, Dec 2000, Paris, France

Communication dans un congrès hal-02912985v1

Recherche de promoteurs a expression phloeme -spécifique chez le céleri (Apium graveolens)

Francoise Vilaine , Sylvie Dinant , Jean-Christophe Palauqui

1er marché aux projets "GRAINES", Nov 1999, Paris, France

Communication dans un congrès hal-02912972v1

Analysis of phloem formation in celery by c-DNA sequencing

Sylvie Dinant , Françoise Vilaine , Murielle Gagneux , Jean-Christophe Palauqui , Chantal Kusiak et al.

International Congress of assimilate transport and partitionning., Aug 1999, Newcastle, Australia

Communication dans un congrès hal-02912978v1
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Training a deep neural network to learn 3D division rules

Alexandre Durrmeyer , Jean-Christophe Palauqui , Philippe Andrey

7th International Plant Computational Biology Workshop, Sep 2023, Cambridge (Angleterre), United Kingdom

Poster de conférence hal-04829522v1

Studying Cell Division Plane Positioning in Early-Stage Embryos

Katia Belcram , Jean-Christophe Palauqui , Martine Pastuglia

Plant Cell Division, 2382, Springer US, pp.141-154, 2022, Methods in Molecular Biology, 978-1-0716-1743-4. ⟨10.1007/978-1-0716-1744-1_9⟩

Chapitre d'ouvrage hal-03766433v1

Studying cell division plane positioning in early-stage embryos

Katia Belcram , Jean-Christophe Palauqui , Martine Pastuglia

Plant Cell Division, 1370, Humana Press Inc., 13 p., 2016, Methods in Molecular Biology, 978-1-4939-3141-5. ⟨10.1007/978-1-4939-3142-2_14⟩

Chapitre d'ouvrage hal-01532553v1