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Jean Mainguy

16
Documents

Publications

Image document

metagWGS: a workflow to analyse short and long HiFi metagenomic reads Taxonomic profile HiFi vs Short reads assembly

Joanna Fourquet , Jean Mainguy , Maïna Vienne , Céline Noirot , Pierre Martin
JOBIM 2022, Jul 2022, Rennes, France. Actes des exposés (keynotes, contributions orales, mini-symposia) : JOBIM2022_proceedings_oral.pdf (23 Mo) et actes des posters et démos : JOBIM2022_proceedings_posters_demos.pdf (19 Mo). ⟨10.15454/1.5572369328961167E12⟩
Conference poster hal-03771202v1
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metagWGS: a workflow to analyse short and long HiFi metagenomic reads

Joanna Fourquet , Maïna Vienne , Jean Mainguy , Vincent Darbot , Pierre Martin
ECCB2022, Sep 2022, Sitges, Spain
Conference poster hal-03788263v1
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Avancées réalisées en métabarcoding et en métagénomique dans le cadre du projet SeqOccIn grâce au séquençage longs fragments

Denis Milan , Jean Mainguy , Adrien Castinel , Olivier Bouchez , Sylvie Combes
Colloque INRAE Genomics 2022, May 2022, Orléans, France. , 2022
Conference poster hal-03776011v1
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Implementation of new methods for metagenomics analysis using PacBio HiFi sequencing

Adrien Castinel , Jean Mainguy , Sylvie Combes , Carole Iampietro , Christine Gaspin
Plant & Animal Genome Conference (PAG) 2022, Jan 2022, San Diego, United States
Conference poster hal-03541346v1
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Strengths and limits of long read metabarcoding

Jean Mainguy , Adrien Castinel , Olivier Bouchez , Sylvie Combes , Carole Iampietro
ECCB 2022, Sep 2022, Meliá Sitges, Spain
Conference poster hal-03848228v1
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Benefits of PacBio HiFi long reads for metagenomic whole genome analysis

Adrien Castinel , Jean Mainguy , Olivier Bouchez , Sylvie Combes , Carole Iampietro
Environmental And Agronomical Genomics Symposium, Oct 2021, Tours, France
Conference poster hal-03538657v1
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Improving microbial taxonomic profiling with long read technologies

Jean Mainguy , Adrien Castinel , Olivier Bouchez , Sylvie Combes , Carole Iampietro
JOBIM2020, Jun 2020, Montpellier (virtuel), France
Conference poster hal-03177058v1
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A Long Read project to find optimal technologic combinations for genome assembly and variability, epigenetic marks detection and metagenomic analysis

Carole Iampietro , Camille Eché , Adrien Castinel , Rémy-Félix Serre , Christophe C. Klopp
PAG XXVIII, Plant and Animal Genome, Jan 2020, San Diego, United States. 2020
Conference poster hal-02947690v1
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Des solutions informatiques innovantes pour l’utilisation et le développement de biomarqueurs de diversité du microbiote.

Maria Bernard , Olivier Rué , Malo Le Boulch , Jean Mainguy , Laurent Cauquil
DefisPHASE 2019, 2019, Rennes, France
Conference poster hal-03851900v1
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Whole metagenome analysis with metagWGS

Joanna Fourquet , Adeline Chaubet , Hélène Chiapello , Christine Gaspin , Marisa Haenni
JOBIM 2019, Jul 2019, Nantes, France. , 2019
Conference poster hal-02788137v1
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Identification of genomic regions for high-resolution taxonomic profiling using long-read sequencing technology

Jean Mainguy , Olivier Bouchez , Adrien Castinel , Sylvie Combes , Christine Gaspin
JOBIM : Journées Ouvertes Biologie Informatique Mathématiques, Jul 2019, Nantes, France. , 2019
Conference poster hal-02791605v1