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Clement Jonquet
Senior Researcher – INRAE (MISTEA), Associate Researcher – University of Montpellier (LIRMM)
98%
Open access
128
Documents
Current affiliations
- 1100640
- 1096435
Researcher identifiers
jonquet
- ResearcherId : B-2364-2012
- IdRef : 076431215
-
0000-0002-2404-1582
Web site
- http://www.lirmm.fr/~jonquet/
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Common Minimum Metadata for FAIR Semantic Artefacts2nd Workshop on Ontologies for FAIR and FAIR Ontologies (Onto4FAIR), Cassia Trojahn; Luiz Olavo Bonino da Silva Santos; Giancarlo Guizzardi; Clement Jonquet, Jul 2023, Sherbrooke, Canada
Conference papers
hal-04106533v2
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Semantic artefact and ontology services for long-term data interpretationPV 2023 - 10th Conference on Ensuring Long-Term Preservation and Adding Value to Scientific and Technical Data, May 2023, Geneva, Switzerland
Conference papers
hal-04079485v1
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IndustryPortal: a Common Repository for FAIR Ontologies in Industry 4.022nd International Semantic Web Conference (ISWC) - Demo & Poster, Nov 2023, Athens, Greece
Conference papers
hal-04207343v1
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Classification of Linking Problem Types for linking semantic dataSEMANTICS, Sep 2023, Leipzig, Germany
Conference papers
hal-04206689v1
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About versioning ontologies or any digital objects with clear semanticsDaMaLOS 2023 - 3rd Workshop on Metadata and Research (objects) Management for Linked Open Science, Leyla Jael Castro; Sonja Schimmler; Jens Dierkes; Danilo Dessì; Dietrich Rebholz-Schuhmann, May 2023, Hersonissos (Crète), Greece. ⟨10.4126/FRL01-006444994⟩
Conference papers
hal-04094847v2
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Ontology Repositories and Semantic Artefact Catalogues with the OntoPortal TechnologyISWC 2023 - 22nd International Semantic Web Conference, Juanzi Li, Nov 2023, Athens, Greece
Conference papers
hal-04088537v2
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Ontological Representation of Cultivated Plants: Linking Botanical and Agricultural UsagesMK 2022 - 1st Workshop on Modular Knowledge @ ESWC 2022, Loris Bozzato; Valentina Anita Carrier; Torsten Hahmann; Antoine Zimmermann, May 2022, Hersonissos, Greece. pp.165-173
Conference papers
hal-03679652v1
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O'FAIRe: Ontology FAIRness Evaluator in the AgroPortal semantic resource repositoryESWC 2022 - 19th Extended Semantic Web Conference, Poster and demonstration, May 2022, Hersonissos, Greece. pp.89-94, ⟨10.1007/978-3-031-11609-4_17⟩
Conference papers
lirmm-03630543v3
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Crop Planning and Production Process Ontology (C3PO), a new model to assist diversified crop productionIFOW 2021 - Integrated Food Ontology Workshop @ 12th International Conference on Biomedical Ontologies (ICBO), Sep 2021, Bolzano, Italy
Conference papers
lirmm-03389513v1
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Description sémantique des stades de développement phénologique des plantes, cas d’étude de la vigne32èmes Journées Francophones d'Ingénierie des Connaissances (IC) Plate-Forme Intelligence Artificielle (PFIA'21), Jun 2021, Bordeaux, France. pp.30-38
Conference papers
emse-03260085v1
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L’ontologie E-Phy, une base de connaissances pour le catalogue des produits phytopharmaceutiques autorisés en agriculture en France.IC - 32es Journées francophones d'Ingénierie des Connaissances, Jun 2021, Bordeaux, France. pp.105-112
Conference papers
emse-03260693v1
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Une méthodologie et un outil d'évaluation du niveau de "FAIRness" pour les ressources sémantiques : le cas d'AgroPortalIC@PFIA 2021 - 32es Journées francophones d'Ingénierie des Connaissances, Plate-Forme Intelligence Artificielle (PFIA'21), Jun 2021, Bordeaux, France. pp.11-19
Conference papers
lirmm-03232615v1
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FAIR or FAIRer? An integrated quantitative FAIRness assessment grid for semantic resources and ontologiesMTSR 2021 - 15th International Conference on Metadata and Semantics Research, Nov 2021, Madrid, Spain. pp.67-80, ⟨10.1007/978-3-030-98876-0_6⟩
Conference papers
lirmm-03208544v3
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Analysis of Term Reuse, Term Overlap and Extracted Mappings across AgroPortal Semantic ResourcesEKAW 2020 - 22nd International Conference on Knowledge Engineering and Knowledge Management, Sep 2020, Bozen-Bolzano, Italy. pp.71-87, ⟨10.1007/978-3-030-61244-3_5⟩
Conference papers
lirmm-02945172v1
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Semantic Description of Plant Phenological Development Stages, starting with GrapevineMTSR 2020 - 14th International Conference on Metadata and Semantics Research, Dec 2020, Madrid, Spain. pp.257-268, ⟨10.1007/978-3-030-71903-6_25⟩
Conference papers
hal-02996846v1
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Investigating One Million XRefs in Thirthy Ontologies from the OBO WorldICBO 2020 - 11th International Conference on Biomedical Ontologies, Sep 2020, Bozen-Bolzano, Italy. pp.G.1-12
Conference papers
lirmm-02945170v1
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Recent progresses in data and knowledge integration for decision support in agri-food chainsIC 2019 - 30es Journées francophones d'Ingénierie des Connaissances, AFIA, Jul 2019, Toulouse, France. pp.43-59
Conference papers
hal-02284538v1
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Projet VisaTM : l'interconnexion OpenMinTeD – AgroPortal – ISTEX, un exemple de service de Text et Data Mining pour les scientifiques françaisIC: Ingénierie des Connaissances, Jul 2018, Nancy, France. pp.247-249
Conference papers
hal-01839626v2
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Maitriser une technologie de gestion des ontologies et vocabulaires en France : défis et enjeuxSemWeb.Pro, Nov 2018, Paris, France
Conference papers
lirmm-01852073v2
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ICD-10 coding of death certificates with the NCBO and SIFR Annotators at CLEF eHealth 2017CLEF: Conference and Labs of the Evaluation Forum, Sep 2017, Dublin, Ireland
Conference papers
lirmm-01605359v1
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ViewpointS: When Social Ranking Meets the Semantic WebFLAIRS: Florida Artificial Intelligence Research Society, May 2017, Marco Island, FL, United States. pp.329-334
Conference papers
lirmm-01598842v1
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PGxO: A very lite ontology to reconcile pharmacogenomic knowledge unitsMethods, tools & platforms for Personalized Medicine in the Big Data Era, Oct 2017, Palermo, Italy. ⟨10.7287/peerj.preprints.3140v1⟩
Conference papers
hal-01593184v2
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French ConText: Détecter la négation, la temporalité et le sujet dans les textes cliniques FrançaisSIIM 2017 - 4ème Symposium sur l'Ingénierie de l'Information Médicale, Nov 2017, Toulouse, France
Conference papers
lirmm-01656834v1
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Challenges for ontology repositories and applications to biomedicine & agronomySIMBig: Symposium on Information Management and Big Data, Sep 2017, Lima, Peru. pp.25-37
Conference papers
lirmm-01679500v1
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Enrichment of French Biomedical Ontologies with UMLS Concepts and Semantic Types for Biomedical Named Entity Recognition Though Ontological Semantic AnnotationLOTKS: Language, Ontology, Terminology and Knowledge Structures, Sep 2017, Montpellier, France
Conference papers
lirmm-01605517v2
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New Generation Metadata vocabulary for Ontology Description and PublicationMTSR 2017 - 11th International Conference on Metadata and Semantics Research, Nov 2017, Tallinn, Estonia. pp.173-185, ⟨10.1007/978-3-319-70863-8_17⟩
Conference papers
lirmm-01605783v1
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Two years later: the landscape of vocabularies and ontologies in the AgroPortalIN-OVIVE, Jul 2017, Montpellier, France
Conference papers
lirmm-01598852v1
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Subjective and generic distance in ViewpointS: an experiment on WordNetWIMS: Web Intelligence, Mining and Semantics, Jun 2016, Nîmes, France. ⟨10.1145/2912845.2912870⟩
Conference papers
lirmm-01397993v1
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Réconciliation d'alignements multilingues dans BioPortalIC: Ingénierie des Connaissances, Jun 2016, Montpellier, France
Conference papers
lirmm-01395900v1
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SIFR BioPortal : Un portail ouvert et générique d’ontologies et de terminologies biomédicales françaises au service de l’annotation sémantiqueJFIM: Journées Francophones d'Informatique Médicale, Jun 2016, Genève, Suisse
Conference papers
hal-01398250v1
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Modèle de métadonnées dans un portail d'ontologiesJFO: Journées Francophones sur les Ontologies, Oct 2016, Bordeaux, France
Conference papers
lirmm-01397388v1
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Multilingual Mapping Reconciliation between English-French Biomedical OntologiesWIMS: Web Intelligence, Mining and Semantics, Jun 2016, Nîmes, France. ⟨10.1145/2912845.2912847⟩
Conference papers
lirmm-01395880v1
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MuEVo, un vocabulaire multi-expertise (patient/médecin) dédié au cancer du seinIC: Ingénierie des Connaissances, Jun 2016, Montpellier, France
Conference papers
hal-01379272v1
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Selection and Combination of Heterogeneous Mappings to Enhance Biomedical Ontology MatchingEKAW: Knowledge Engineering and Knowledge Management, Nov 2016, Bologne, Italy. pp.19-33, ⟨10.1007/978-3-319-49004-5_2⟩
Conference papers
lirmm-01395883v1
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Reusing the NCBO BioPortal technology for agronomy to build AgroPortalICBO: International Conference on Biomedical Ontologies, Aug 2016, Corvallis, OR, United States
Conference papers
hal-01398251v1
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MuEVo, a breast cancer Consumer Health Vocabulary built out of web forumsSWAT4LS: Semantic Web Applications and Tools for Life Sciences, 2016, Amsterdam, Netherlands
Conference papers
hal-01398253v1
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Roadmap for a multilingual BioPortalMSW: Multilingual Semantic Web, Jun 2015, Portoroz, Slovenia
Conference papers
lirmm-01172218v1
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Preference Dissemination by Sharing Viewpoints: Simulating SerendipityIC3K: Knowledge Discovery, Knowledge Engineering and Knowledge Management, Nov 2015, Lisbon, Portugal. pp.402-409, ⟨10.5220/0005636204020409⟩
Conference papers
lirmm-01223078v1
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Diffusion de systèmes de préférences par confrontation de points de vue, vers une simulation de la SérendipitéIC: Ingénierie des Connaissances, INRIA, AFIA, Jul 2015, Rennes, France
Conference papers
lirmm-01172223v1
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Prédiction de la polysémie pour un terme biomédical12ième Conférence francophone en Recherche d'Information et Applications (CORIA), Mar 2015, Paris, France. pp.437-452
Conference papers
lirmm-01132654v1
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AgroPortal : a proposition for ontology-based services in the agronomic domainIN-OVIVE, Jun 2015, Rennes, France
Conference papers
lirmm-01172232v1
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An Approach to Compare Bio-Ontologies PortalsMIE: Medical Informatics European, Aug 2014, Istanbul, Turkey
Conference papers
lirmm-01052549v1
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SIFR Project: The Semantic Indexing of French Biomedical Data ResourcesSIMBig: Symposium on Information Management and Big Data, Juan Antonio Lossio-Ventura; Hugo Alatrista-Salas, Sep 2014, Cusco, Peru. pp.58-61
Conference papers
lirmm-01112901v1
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Construction et évolution de connaissances par confrontation de points de vue : prototype pour la recherche d'information scientifiqueIC: Ingénierie des Connaissances, May 2014, Clermont-Ferrand, France. pp.175-186
Conference papers
lirmm-00995948v1
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BIOTEX: A system for Biomedical Terminology Extraction, Ranking, and ValidationISWC: International Semantic Web Conference, Oct 2014, Riva del Garda, Italy. pp.157-160
Conference papers
lirmm-01112894v1
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REX:Innovation pédagogique via l'utilisation de tablettes numériques à Polytech MontpellierTICE: Technologies de l'Information et de la Communication pour l'Enseignement, Nov 2014, Béziers, France. pp.97-106
Conference papers
lirmm-01118757v1
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Biomedical Terminology Extraction: A new combination of Statistical and Web Mining ApproachesJADT: Journées d'Analyse statistique des Données Textuelles, Jun 2014, Paris, France. pp.421-432
Conference papers
lirmm-01056598v2
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Scoring semantic annotations returned by the NCBO AnnotatorSWAT4LS: Semantic Web Applications and Tools for Life Sciences, Dec 2014, Berlin, Germany
Conference papers
lirmm-01099860v1
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Integration of Linguistic and Web Information to Improve Biomedical Terminology ExtractionIDEAS: International Database Engineering & Applications Symposium, Jul 2014, Porto, Portugal. pp.265-269, ⟨10.1145/2628194.2628208⟩
Conference papers
lirmm-01068547v2
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Yet Another Ranking Function for Automatic Multiword Term Extraction9th International Conference on Natural Language Processing (PolTAL), Sep 2014, Warsaw, Poland. pp.52-64, ⟨10.1007/978-3-319-10888-9_6⟩
Conference papers
lirmm-01068556v1
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Gestion du multilinguisme dans un portail d’ontologies: étude de cas pour le NCBO BioPortalTOTh Workshop, Dec 2014, Bruxelles, Belgique
Conference papers
lirmm-01099882v1
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Comparing BioPortal and HeTOP: towards a unique biomedical ontology portal?IWBBIO: International Work-Conference on Bioinformatics and Biomedical Engineering, Apr 2014, Granada, Spain
Conference papers
lirmm-01052583v1
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Extraction automatique de termes combinant différentes informationsTALN: Traitement Automatique des Langues Naturelles, Jul 2014, Marseille, France. pp.407-412
Conference papers
lirmm-01020051v1
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Combining C-value and Keyword Extraction Methods for Biomedical Terms ExtractionLBM: Languages in Biology and Medicine, Dec 2013, Tokyo, Japan
Conference papers
lirmm-01019991v1
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Negotiating the Web Science Curriculum through Shared Educational ArtefactsWebSci'11: 3rd International Conference on Web Science, Jun 2011, Koblenz, Germany. pp.14-17
Conference papers
lirmm-00652085v1
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The Lexicon Builder Web service: Building Custom Lexicons from two hundred Biomedical OntologiesAmerican Medical Informatics Association Annual Symposium, AMIA'10, Nov 2010, Washington, DC, United States. pp.6
Conference papers
hal-00558033v1
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Optimize First, Buy Later: Analyzing Metrics to Ramp-up Very Large Knowledge Bases9th International Semantic Web Conference, ISWC'10, Nov 2010, Shangai, China. pp.486-501
Conference papers
hal-00558036v1
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Indexation et intégration de ressources textuelles à l'aide d'ontologies : application au domaine biomédical21èmes Journées Francophones d'Ingénierie des Connaissances, Jun 2010, Nimes, France. pp.271-282
Conference papers
hal-00488419v1
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NCBO Resource Index: Ontology-Based Search and Mining of Biomedical ResourcesSemantic Web Challenge, 9th International Semantic Web Conference, ISWC'10, Nov 2010, Shangai, China. pp.8
Conference papers
hal-00557982v1
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Un service Web pour l'annotation sémantique de données biomédicales avec des ontologies13èmes Journées Francophones d'Informatique Médicale, JFIM'09, Apr 2009, Nice, France, France. pp.12
Conference papers
hal-00492022v1
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What Four Million Mappings Can Tell You about Two Hundred Ontologies8th International Semantic Web Conference, ISWC'09, Oct 2009, Washington DC, United States. pp.229-242
Conference papers
hal-00489094v1
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The Open Biomedical AnnotatorAMIA Summit on Translational Bioinformatics, Mar 2009, San Francisco, CA, United States. pp.56-60
Conference papers
hal-00492024v1
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Service-Based Integration of Grid and Multi-Agent Systems ModelsInternational Workshop on Service-Oriented Computing: Agents, Semantics, and Engineering, SOCASE'08:, May 2008, Estoril, Portugal. pp.56-68, ⟨10.1007/978-3-540-79968-9_5⟩
Conference papers
lirmm-00288454v1
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A System for Ontology-Based Annotation of Biomedical DataInternational Workshop on Data Integration in The Life Sciences 2008, DILS'08, Jun 2008, Evry, France. pp.144-152
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The Principle of Immanence in GRID-Multiagent Integrated SystemsAWeSOMe'08: 4th International Workshop On Agents and Web Services Merging in Distributed Environments - OTM 2008 Workshops, Nov 2008, Monterrey, Mexico. pp.98-107, ⟨10.1007/978-3-540-88875-8_29⟩
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Agent-Grid Integration OntologyOTM: On the Move to Meaningful Internet Systems, Oct 2006, Montpellier, France. pp.136-146, ⟨10.1007/11915034_36⟩
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Intégration orientée service des modèles Grid et Multi-Agents14èmes Journées Francophones sur les Systèmes Multi-Agents, JFSMA'06, Oct 2006, Annecy, France. pp.271-274
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The Grid Shared Desktop for CSCLeChallenges 2006 Conference, Oct 2006, Barcelona, Spain, pp.1493-1499
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I-Dialogue: Modelling Agent Conversation by Streams and Lazy EvaluationInternational Lisp Conference, ILC'05, Jun 2005, Stanford University, United States. pp.1
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Agents Communicating for Dynamic Service GenerationGLS'04: 1st Workshop on GRID Learning Services at ITS'04, Aug 2004, Maceio, Brazil. pp.39-53
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Les Agents comme des interpréteurs Scheme : Spécification dynamique par la communicationRFIA: Reconnaissance des Formes et Intelligence Artificielle, AFRIF-AFIA, Jan 2004, Toulouse, France. pp.779-788
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Cognitive Agents Learning by CommunicatingALCAA: Agents Logiciels - Coopération - Apprentissage - Activités Humaines, Sep 2003, Bayonne, France
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Dynamic Learning Agents and Enhanced Presence on the Grid3rd International Workshop on GRID Infrastructure to Support Future Technology Enhanced Learning (LeGE-WG), Dec 2003, Berlin, Germany
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Apprentissage Issu de la Communication pour des Agents CognitifsJournées Francophones sur les Systèmes Multi-Agents (JFSMA), 2003, Hammamet, Tunisie. pp.83-87
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Adoption of BioPortal's Ontology Registry Software: The Emerging OntoPortal CommunityConference poster lirmm-02360625v1 |
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D2KAB project taking off: Data to Knowledge in Agronomy and BiodiversityRDA P14 2019 - 14th Research Data Alliance Plenary Conference, Oct 2019, Helsinki, Finland. , 2019, ⟨10.5281/zenodo.3520300⟩
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AgroPortal: an ontology repository for agronomyEFITA WCCA CONGRESS, Jul 2017, Montpellier, France. , 11th European Conference dedicated to the future use of ICT in the agri-food sector, bioresource and biomass sector, with World Congress on Computers in Agriculture demonstration session, 2017, demonstration session
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lirmm-01598854v2
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The Agronomic Linked Data (AgroLD) projectEFITA WCCA CONGRESS, Jul 2017, Montpellier, France. , 11th European Conference dedicated to the future use of ICT in the agri-food sector, bioresource and biomass sector, with World Congress on Computers in Agriculture, 2017, demonstration session
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lirmm-01598856v1
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A Way to Automatically Enrich Biomedical OntologiesPitoura Evaggelia; Maabout Sofian; Koutrika Georgia; Marian Amelie; Tanca Letizia; Manolescu Ioana; Stefanidis Kostas. EDBT 2016 - 19th International Conference on Extending Database Technology, Mar 2016, Bordeaux, France. OpenProceedings.org, Advances in Database Technology - EDBT 2016, 19th International Conference on Extending Database Technology, Bordeaux, France, March 15-16, Proceedings, pp.676-677, 2016, ⟨10.5441/002/edbt.2016.82⟩
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AgroPortal : A Proposition for Ontology-Based Services in the Agronomic DomainPAG: Plant & Animal Genome, Jan 2016, San Diego, United States. , International Plant & Animal Genome XXIV, P0343, 2016, Systems Biology and Ontologies, Poster session
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AgroPortal: an open repository of ontologies and vocabularies for agriculture and nutrition dataBen Schaap. GODAN Summit, Sep 2016, New York, NY, United States. , GODAN Summit is an Open Data Research Symposium on Agriculture and Nutrition, 2016
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Scénarios pédagogiques numériques via l'utilisation de l'iPad par et pour les étudiants de Polytech MontpellierKarsenti, T. SOMMET iPad en éducation, May 2014, Montreal, Canada. , 2ème Sommet iPad en éducation, 2014
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Facilitating efficient knowledge management and discovery in the Agronomic SciencesRDA: Research Data Alliance, Sep 2014, Amsterdam, Netherlands. , 4th Plenary Meeting of the Research Data Alliance, 2014
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Representing NCBO Annotator results in standard RDF with the Annotation OntologyA. Paschke; A. Burger; P. Romano; M.S. Marshall; A. Splendiani. SWAT4LS: Semantic Web Applications and Tools for Life Sciences, Dec 2014, Berlin, Germany. CEUR-WS.org, 7th International Semantic Web Applications and Tools for Life Sciences, 1320, 2014
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Semantic Annotation Workflow using Bio-OntologiesWorkshop on Crop Ontology and Phenotyping Data Interoperability, Mar 2014, Montpellier, France. , 1 p., 2014
Conference poster
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Ontology-based Web Services for Data Annotation and IntegrationISMB: Intelligent Systems for Molecular Biology, Jul 2010, Boston, United States. , 18th International Conference on Intelligent Systems for Molecular Biology, 2010
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Improving data identification and tagging for more effective decision making in agricultureLeisa Armstrong. Improving Data Management and Decision Support Systems in Agriculture, 85, Burleigh Dodds Science Publishing, 2020, Series in Agricultural Science, 978-1-78676-340-2
Book sections
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Semantic Indexing of French Biomedical Data ResourcesBook sections lirmm-02360615v1 |
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Learning Agents and Enhanced Presence for Generation of Services on the GridTowards the Learning GRID: Advances in Human Learning Services, 127, IOS Press, pp.203-213, 2005, Frontiers in Artificial Intelligence and Applications, 978-1-58603-534-1 (print) 978-1-60750-123-7 (online)
Book sections
lirmm-00106610v1
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State-of-the-art browsing of SKOS resources in AgroPortal2023
Preprints, Working Papers, ...
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OntoPortal Workshop 2022 ReportUniversité de Montpellier; Stanford University. 2022, 16p
Reports
hal-04087929v1
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Assessing the Practice of Ontology Metadata: A Survey Result[Research Report] University of Montpellier. 2018
Reports
lirmm-02315001v1
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A Map of Agri-food Data Standards[Research Report] F1000 7-177, Godan. 2018
Reports
lirmm-01964791v1
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Landscaping the use of semantics to enhance the interoperability of agricultural data[Research Report] Research Data Alliance. 2017, pp.59
Reports
hal-02607815v1
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YAM-BIO – Results for OAEI 2017University of Montpellier. 2017, pp.1-6
Reports
lirmm-01679503v1
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AGIL Specifications06030, 2006, pp.32
Reports
lirmm-00102805v1
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Dynamic Service Generation: Agent interactions for service exchange on the GridSoftware Engineering [cs.SE]. Université Montpellier II - Sciences et Techniques du Languedoc, 2006. English. ⟨NNT : ⟩
Theses
tel-00115389v1
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Ontology Repository and Ontology-Based Services – Challenges, contributions and applications to biomedicine & agronomyWeb. Université de Montpellier, 2019
Habilitation à diriger des recherches
tel-02133335v1
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Proceedings of the 2nd International Workshop on Semantics for Biodiversity (S4BioDiv 2017)S4BioDiv: International Workshop on Semantics for Biodiversity, Oct 2017, Vienna, Australia. Ceur-1933, CEUR, 2017
Proceedings
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Actes de la 9ème conférence des Technologies de l’Information et de la Communication pour l’Enseignement (TICE 2014)Claude Frasson; Jean-Marc Labat; Fabien Gandon; David Cassagne; Clement Jonquet; Stefano A. Cerri; Philippe Pujas. TICE: Technologies de l’Information et de la Communication pour l’Enseignement, Nov 2014, Béziers, France. IUT Béziers, 2014
Proceedings
hal-01187103v1
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Proceedings of the 1st International Workshop on Semantics for BiodiversityPierre Larmande; Elizabeth Arnaud; Isabelle Mougenot; Clement Jonquet; Thérèse Libourel; Manuel Ruiz. 1. International Workshop on Semantics for Biodiversity, May 2013, Montpellier, France. Ceur-979, , pp.001-131, 2013
Proceedings
lirmm-00831757v1
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