Julie Coloigner

66
Documents

Présentation

Publications

Publications

Deposit thumbnail

Evaluating lesion-specific preprocessing pipelines for rs-fMRI in stroke patients: Impact on functional connectivity and behavioral prediction

Alix Lamouroux , Julie Coloigner , Pierre Maurel , Nicolas Farrugia , Giulia Lioi

Imaging Neuroscience, 2025, 3, pp.1-16. ⟨10.1162/IMAG.a.6⟩

Article dans une revue hal-05115858v1
Deposit thumbnail

Graph Slepian Framework for Guided Filtering With Application to Neuroimaging

Sébastien Dam , Julie Coloigner , Dimitri van De Ville

IEEE Transactions on Biomedical Engineering, 2025, pp.1-10. ⟨10.1109/TBME.2025.3628058⟩

Article dans une revue hal-05353573v1
Deposit thumbnail

Multimodal Graph Convolutional Network on Brain Structure and Function in Adolescent Anxiety and Depression

Sébastien Dam , Jean-Marie Batail , Pierre Maurel , Julie Coloigner

IEEE Transactions on Signal and Information Processing over Networks, 2025, 11, pp.617-629. ⟨10.1109/TSIPN.2025.3577354⟩

Article dans une revue hal-04764608v1
Deposit thumbnail

A Riemannian framework for incorporating white matter bundle priors in ODF-based tractography algorithms.

Thomas Durantel , Gabriel Girard , Emmanuel Caruyer , Olivier Commowick , Julie Coloigner

PLoS ONE, In press, pp.1-10

Article dans une revue hal-04246380v1

fMRIStroke: A preprocessing pipeline for fMRI Data from Stroke patients

Alix Lamouroux , Giulia Lioi , Julie Coloigner , Pierre Maurel , Nicolas Farrugia

Journal of Open Source Software, 2024, 9 (103), pp.6636. ⟨10.21105/joss.06636⟩

Article dans une revue hal-04837034v1
Deposit thumbnail

Microstructural brain assessment in late-life depression and apathy using diffusion MRI multi-compartments models and tractometry

Renaud Hédouin , Jean-Charles Roy , Thomas Desmidt , Gabriel Robert , Julie Coloigner

Scientific Reports, 2024, 14 (1), pp.18193. ⟨10.1038/s41598-024-67535-3⟩

Article dans une revue hal-04685291v1
Deposit thumbnail

Quantifying Apathy in Late-Life Depression: Unraveling Neurobehavioral Links through Daily Activity Patterns and Brain Connectivity Analysis

Jean-Charles Roy , Renaud Hédouin , Thomas Desmidt , Sébastien Dam , Iris Miréa-Grivel et al.

Biological Psychiatry: Cognitive Neuroscience and Neuroimaging, 2024, pp.1-30. ⟨10.1016/j.bpsc.2024.04.002⟩

Article dans une revue hal-04564336v1
Deposit thumbnail

Structural Brain Connectivity and Treatment Improvement in Mood Disorder

Sébastien Dam , Jean-Marie Batail , Gabriel Robert , Dominique Drapier , Pierre Maurel et al.

Brain connectivity, 2024, 14 (4), pp.239-251. ⟨10.1089/brain.2023.0063⟩

Article dans une revue inserm-04515217v3
Deposit thumbnail

Brain BOLD and NIRS response to hyperoxic challenge in sickle cell disease and chronic anemias

Chau Vu , Adam Bush , Matthew Borzage , Soyoung Choi , Julie Coloigner et al.

Magnetic Resonance Imaging, 2023, 100, pp.26-35. ⟨10.1016/j.mri.2023.03.002⟩

Article dans une revue hal-04284976v1
Deposit thumbnail

Connectivity patterns of the core resting-state networks associated with apathy in late-life depression

Jean-Charles Roy , Thomas Desmidt , Sébastien Dam , Iris Mirea-Grivel , Louise Weyl et al.

Journal of Psychiatry and Neuroscience, 2023, 48 (6), pp.E404 - E413. ⟨10.1503/jpn.230008⟩

Article dans une revue hal-04295208v1
Deposit thumbnail

Quantitative perfusion mapping with induced transient hypoxia using BOLD MRI

Chau Vu , Yaqiong Chai , Julie Coloigner , Aart J Nederveen , Matthew Borzage et al.

Magnetic Resonance in Medicine, 2021, 85 (1), pp.168-181. ⟨10.1002/mrm.28422⟩

Article dans une revue inserm-02913689v1
Deposit thumbnail

Tract‐specific analysis and neurocognitive functioning in sickle cell patients without history of overt stroke

Yaqiong Chai , Chaoran Ji , Julie Coloigner , Soyoung Choi , Melissa Balderrama et al.

Brain and Behavior, 2021, 11 (3), ⟨10.1002/brb3.1978⟩

Article dans une revue hal-04513348v1
Deposit thumbnail

The impact of Neurofeedback on effective connectivity networks in chronic stroke patients: an exploratory study

Giulia Lioi , Adolfo Veliz , Julie Coloigner , Quentin Duché , Simon Butet et al.

Journal of Neural Engineering, 2021, 18 (5), pp.056052. ⟨10.1088/1741-2552/ac291e⟩

Article dans une revue hal-03354296v1
Deposit thumbnail

Transient Hypoxia Model Revealed Cerebrovascular Impairment in Anemia Using BOLD MRI and Near‐Infrared Spectroscopy

Julie Coloigner , Chau Vu , Matthew Borzage , Adam Bush , Soyoung Choi et al.

Journal of Magnetic Resonance Imaging, 2020, 52 (5), pp.1400-1412. ⟨10.1002/jmri.27210⟩

Article dans une revue inserm-02913695v1
Deposit thumbnail

Structural abnormalities associated with poor outcome of a major depressive episode: the role of thalamus.

Jean-Marie Batail , Julie Coloigner , Marine Soulas , Gabriel Robert , Christian Barillot et al.

Psychiatry Research: Neuroimaging, 2020, 305, pp.1-10. ⟨10.1016/j.pscychresns.2020.111158⟩

Article dans une revue hal-02920551v1
Deposit thumbnail

White matter abnormalities in depression: a categorical and phenotypic diffusion MRI study.

Julie Coloigner , Jean-Marie Batail , Olivier Commowick , Isabelle Corouge , Gabriel Robert et al.

Neuroimage-Clinical, 2019, 22, pp.101710. ⟨10.1016/j.nicl.2019.101710⟩

Article dans une revue inserm-01938407v1
Deposit thumbnail

White matter has impaired resting oxygen delivery in sickle cell patients

Yaqiong Chai , Adam Bush , Julie Coloigner , Aart Nederveen , Benita Tamrazi et al.

American Journal of Hematology, 2019, 94 (4), pp.467-474. ⟨10.1002/ajh.25423⟩

Article dans une revue inserm-02174474v1
Deposit thumbnail

Patients with sickle-cell disease exhibit greater functional connectivity and centrality in the locus coeruleus compared to anemic controls

Ravi Bhatt , Lonnie Zeltzer , Julie Coloigner , John Wood , Tom Coates et al.

Neuroimage-Clinical, 2019, 21, pp.101686. ⟨10.1016/j.nicl.2019.101686⟩

Article dans une revue inserm-02174466v1
Deposit thumbnail

Graph Lasso-based test for evaluating functional brain connectivity in sickle cell disease

Julie Coloigner , Ronald Phlypo , Thomas D. Coates , Nastasha Lepore , John C Wood

Brain connectivity, 2017, 7 (7), ⟨10.1089/brain.2016.0474⟩

Article dans une revue hal-01658272v1
Deposit thumbnail

Contrasting resting-state fMRI abnormalities from sickle and non-sickle anemia

Julie Coloigner , Yeun Kim , Adam Bush , Soyoung Choi , Melissa Balderrama et al.

PLoS ONE, 2017, 12 (10), pp.e0184860. ⟨10.1371/journal.pone.0184860⟩

Article dans une revue hal-01710679v1
Deposit thumbnail

A novel classification method for prediction of rectal bleeding in prostate cancer radiotherapy based on a semi-nonnegative ICA of 3D planned dose distributions

Julie Coloigner , Aureline Fargeas , Amar Kachenoura , Lu Wang , Gael Dréan et al.

IEEE Journal of Biomedical and Health Informatics, 2015, 9 (3), pp.1168-1177. ⟨10.1109/JBHI.2014.2328315⟩

Article dans une revue hal-01011843v1

On feature extraction and classification in prostate cancer radiotherapy using tensor decompositions.

Auréline Fargeas , Laurent Albera , Amar Kachenoura , Gaël Dréan , Juan-David Ospina et al.

Medical Engineering & Physics, 2015, 37 (1), pp.126-31. ⟨10.1016/j.medengphy.2014.08.009⟩

Article dans une revue istex inserm-01119187v1
Deposit thumbnail

Line search and trust region strategies for canonical decomposition of semi-nonnegative semi-symmetric 3rd order tensors

Julie Coloigner , Ahmad Karfoul , Laurent Albera , Pierre Comon

Linear Algebra and its Applications, 2014, 450, pp.334-374. ⟨10.1016/j.laa.2014.02.001⟩

Article dans une revue hal-00945606v1
Deposit thumbnail

Semi-nonnegative joint diagonalization by congruence and semi-nonnegative ICA

Julie Coloigner , Laurent Albera , Amar Kachenoura , Fanny Noury , Lotfi Senhadji

Signal Processing, 2014, 105, pp.185-197. ⟨10.1016/j.sigpro.2014.05.017⟩

Article dans une revue inserm-01006599v1
Deposit thumbnail

Integrating Functional and Structural Brain Connectomes: a novel multilayer graphs framework for Alzheimer's disease classification

Carlo Ferritto , Giulia Lioi , Pierre-Yves Jonin , Julie Coloigner

EUSIPCO 2025 - 33rd European Signal Processing Conference, Sep 2025, Isola delle Femmine, Italy. pp.1-4

Communication dans un congrès hal-05238535v1

Optimized Multilayer Graphs for Integrating Functional and Structural Connectivity in Alzheimer's Disease Classification

Carlo Ferritto , Pierre-Yves Jonin , Giulia Lioi , Julie Coloigner

NetSci 2025 - International School and Conference on Network Science, Jun 2025, Maastricht, Netherlands. pp.1-1

Communication dans un congrès hal-05238559v1
Deposit thumbnail

Improved Riemannian FOD averaging for fiber bundle priors incorporation in FOD-based tractography algorithms

Grégoire Ville , Emmanuel Caruyer , Julie Coloigner

IST 2025 - International Society for Tractography, Oct 2025, Bordeaux, France. pp.1-1

Communication dans un congrès hal-05425887v1
Deposit thumbnail

Multi-compartment tractometry approach for white matter neuroinflammation investigation in late-life depression

Nathan Decaux , Gabriel Robert , Julie Coloigner

IST 2025 - International Society for Tractography Conference, Oct 2025, Bordeaux, France

Communication dans un congrès hal-05458484v1
Deposit thumbnail

Data-driven identification of functional network changes in Neurofeedback stroke rehabilitation: A clinical validation of network-based statistics

Alix Lamouroux , Julie Coloigner , Pierre Maurel , Nicolas Farrugia , Isabelle Bonan et al.

EUSIPCO 2025 - 33rd European Signal Processing Conference, Sep 2025, Palerme, Italy. pp.1522-1526

Communication dans un congrès hal-05271292v1
Deposit thumbnail

Réseau de neurones convolutifs sur graphes multimodal pour l'étude de la structure et de la fonction cérébrales dans l'anxiété et la dépression à l'adolescence

Sébastien Dam , Jean-Marie Batail , Pierre Maurel , Julie Coloigner

IABM 2025 - 3ème édition du Colloque Français d'Intelligence Artificielle en Imagerie Biomédicale, Mar 2025, Nice, France. pp.1-3

Communication dans un congrès hal-04905297v1

Two Modalities, One Network: A Multilayer Graph Framework for Alzheimer's Disease Biomarkers

Carlo Ferritto , Giulia Lioi , Pierre-Yves Jonin , Julie Coloigner

BraYn 2025 - 8 th Conference, the Brainstorming Research Assembly for Young Neuroscientists, Oct 2025, Turin, Italy

Communication dans un congrès hal-05384103v1
Deposit thumbnail

Graph Wavelet Packets for the Classification of Brain Data in Anxiety and Depression

Sébastien Dam , Pierre Maurel , Julie Coloigner

EUSIPCO 2024 - 32nd European conference on signal processing, Aug 2024, Lyon, France. pp.1-5

Communication dans un congrès hal-04683535v1
Deposit thumbnail

SOS-MUSIC, a subspace approach for EEG source imaging promoting sparsity of active sources

Carla Joud , Laurent Albera , Isabelle Merlet , Julie Coloigner

EUSIPCO 2024 - 32nd European signal processing conference, Aug 2024, Lyon, France. pp.1-5

Communication dans un congrès hal-04685505v1

263. Treatment Resistant Versus Non-Resistant Depression: A Whole-Brain Morphometry Replication Study in Young Adults

Marie-Laure Paillère Martinot , Jean-Charles Roy , Julie Coloigner , Renaud Hédouin , Jean-Luc Martinot et al.

2024 - Society of Biological Psychiatry’s Meeting, May 2024, Austin (TX), United States. pp.S207-S207, ⟨10.1016/j.biopsych.2024.02.762⟩

Communication dans un congrès hal-04685004v1
Deposit thumbnail

GSP-DERIVED BRAIN FEATURES FOR CLASSIFICATION IN ANXIETY AND DEPRESSION

Sébastien Dam , Pierre Maurel , Julie Coloigner

ISBI 2024 - 21st IEEE International Symposium on Biomedical Imaging, May 2024, Athens, Greece

Communication dans un congrès hal-04770983v2
Deposit thumbnail

A convolutional Wasserstein distance for tractography evaluation : complementary study to state-of-the-art measures

Thomas Durantel , Julie Coloigner , Olivier Commowick

ISBI 2022 - IEEE International Symposium on Biomedical Imaging, Mar 2022, Calcutta, India. ⟨10.1109/ISBI52829.2022.9761650⟩

Communication dans un congrès hal-03630777v1
Deposit thumbnail

Imaging biomarker discovery in major depressive disorder with diffusion MRI multi-compartment models

Renaud Hedouin , Olivier Commowick , Julie Coloigner

OHBM 2022 - 28th Annual Meeting of the Organization for Human Brain Mapping, Jun 2022, Glasgow, United Kingdom

Communication dans un congrès inserm-03934869v1
Deposit thumbnail

Shape-based features of white matter fiber-tracts associated with outcome in Major Depression Disorder

Claire Cury , Jean-Marie Batail , Julie Coloigner

MICCAI 2022 - International Conference on Medical Image Computing and Computer-Assisted Intervention, Sep 2022, Singapour, Singapore. pp.163-173, ⟨10.1007/978-3-031-16431-6_16⟩

Communication dans un congrès hal-03798593v1
Deposit thumbnail

Structural and functional interplay in anxiety related classification: a graph signal processing approach

Giovanna Orrù , Pierre Maurel , Julie Coloigner

ISBI 2021 - IEEE International Symposium on Biomedical Imaging, Apr 2021, Nice, France. pp.1-4

Communication dans un congrès hal-03450470v1
Deposit thumbnail

Effect of prenatal organic solvent exposure on structural connectivity at childhood

Julie Coloigner , Anne-Claire Binter , Elise Bannier , Jean-Christophe Ferré , Cécile Chevrier et al.

ISBI 2019 - 16th IEEE International Symposium on Biomedical Imaging, Apr 2019, Venise, Italy. pp.151-154, ⟨10.1109/ISBI.2019.8759473⟩

Communication dans un congrès inserm-02176376v1

Structural connectivity analysis in treatment-resistant depression

Julie Coloigner , Jean-Marie Batail , Dominique Drapier , Christian Barillot

OHBM 2019 - 25th Annual Meeting of the Organization for Human Brain Mapping, Jun 2019, Rome, Italy. pp.1-2

Communication dans un congrès hal-02176403v1
Deposit thumbnail

Hyperoxia Challenge in Healthy and Anemic Subjects using BOLD MRI

Chau Vu , Julie Coloigner , John Wood

ISMRM, May 2019, Montreal, France

Communication dans un congrès inserm-02159373v1
Deposit thumbnail

Diffusion MRI as an imaging marker of depression from a large and homogenous population study

Julie Coloigner , Jean-Marie Batail , Isabelle Corouge , Jean-Christophe Ferré , Dominique Drapier et al.

ISMRM 2018 - International Society for Magnetic Resonance in Medicine, Jun 2018, Paris, France. pp.1-2

Communication dans un congrès hal-01812093v1
Deposit thumbnail

Diffusion MRI as a descriptive imaging marker of the pathogenesis of treatment-resistant depression

Julie Coloigner , Jean-Marie Batail , Isabelle Corouge , Jean-Christophe Ferré , Dominique Drapier et al.

ISMRM 2018 - International Society for Magnetic Resonance in Medicine, Jun 2018, Paris, France. pp.1-2

Communication dans un congrès hal-01812087v1
Deposit thumbnail

Fiber connection density based on in sickle cell disease

Julie Coloigner , Jacob Anthony , Rosa Vlosova , Adam Bush , Soyoung Choi et al.

25th annual meeting of the international society of magnetic resonance in medecine, 2017, Honolulu, Hawaii, United States

Communication dans un congrès hal-01792310v1
Deposit thumbnail

Parametric Mapping of Oxygen Activity in Human Placenta across Gestation using in utero BOLD imaging

Vidya Rajagopalan , Vince Schmithorst , Julie Coloigner , Jessica Winowski , Matthew Borzage et al.

25th annual meeting of the international society of magnetic resonance in medecine, 2017, Honolulu, United States

Communication dans un congrès hal-01792319v1

An experimental investigation of labeling efficiency for pseudo-continuous arterial spin labeling

Yaqiong Chai , Adam Bush , Julie Coloigner , Xiaoping Qu , Jonathan Chia et al.

2016 IEEE 13th International Symposium on Biomedical Imaging (ISBI 2016), Apr 2016, Prague, France. ⟨10.1109/ISBI.2016.7493458⟩

Communication dans un congrès hal-01710699v1
Deposit thumbnail

BOLD delay times using group delay in sickle cell disease

Julie Coloigner , Chau Vu , Adam Bush , Matt Borzage , Vidya Rajagopalan et al.

SPIE Medical Imaging, Feb 2016, San Diego, United States. ⟨10.1117/12.2217263⟩

Communication dans un congrès hal-01710721v1
Deposit thumbnail

The 3D EdgeRunner Pipeline: a novel shape-based analysis for neoplasms characterization

Fernando Yepes-C , Rebecca Johnson , Yi Lao , Darryl Hwang , Julie Coloigner et al.

SPIE Medical Imaging 2016, Feb 2016, San Diego, CA, United States. ⟨10.1117/12.2217238⟩

Communication dans un congrès hal-01710708v1
Deposit thumbnail

Functional connectivity analysis for thalassemia disease based on a graphical lasso model

Julie Coloigner , Ronald Phlypo , Adam Bush , Natasha Lepore , John Wood

ISBI 2016 - IEEE International Symposium on Biomedical Imaging, Apr 2016, Prague, Czech Republic. pp.1295 - 1298, ⟨10.1109/ISBI.2016.7493504⟩

Communication dans un congrès hal-01355161v1

DTI analysis in patients with sickle cell disease

Julie Coloigner , Daniela Sacchetto , Jeff Tanedo , Maxime Descoteaux , Thomas D. Coates et al.

46th Society For Neuroscience conference, 2016, San Diego, United States

Communication dans un congrès hal-01792302v1
Deposit thumbnail

Low-frequency fluctuation amplitude analysis of resting-state fMRI for sickle cell disease patients

Julie Coloigner , Yeun Kim , Adam Bush , Matt Borzage , Vidya Rajagopalan et al.

11th International Symposium on Medical Information Processing and Analysis, 2015, Cuenca-Ecuador, Ecuador

Communication dans un congrès hal-01792258v1

Tract specific analysis in patients with sickle cell disease

Yaqiong Chai , Julie Coloigner , Xiaoping Qu , Soyoung Choi , Adam Bush et al.

11th International Symposium on Medical Information Processing and Analysis (SIPAIM 2015), Nov 2015, Cuenca, France. ⟨10.1117/12.2213617⟩

Communication dans un congrès hal-01710727v1
Deposit thumbnail

Analysis of Hemodynamic Changes and Bold Signals of Sickle Cell Disease Patients during Desaturation

Julie Coloigner , Chau Vu , Matt Borzage , Adam Bush , Natasha Lepore et al.

57th American Society of Hematology (ASH) conference, 2015, Orlando, United States

Communication dans un congrès hal-01792249v1
Deposit thumbnail

Décomposition de tableaux d'ordre trois semi-nonnégatifs et semi-symétriques

Julie Coloigner , Laurent Albera , Ahmad Karfoul , Pierre Comon

GRETSI 11, Vingt-troisième colloque sur le Traitement du Signal et des Images, Sep 2011, Bordeaux, France. pp.4

Communication dans un congrès hal-00659973v1

Canonical decomposition of semi-symmetric semi-nonnegative three-way arrays .

Julie Coloigner , Laurent Albera , Amar Kachenoura , Lotfi Senhadji

Signals, Systems and Computers (ASILOMAR), Nov 2011, Pacific Grove, CA, United States. pp.444 - 448, ⟨10.1109/ACSSC.2011.6190038⟩

Communication dans un congrès hal-00908655v1

Semi-nonnegative Independent Component Analysis: The (3,4)-SENICAexp Method.

Julie Coloigner , Laurent Albera , Ahmad Karfoul , Amar Kachenoura , Pierre Comon et al.

Proceedings of the 9th International Conference Latent Variable Analysis and Signal Separation LVA/ICA 2010, Sep 2010, St. Malo, France. pp.612-619, ⟨10.1007/978-3-642-15995-4_76⟩

Communication dans un congrès istex hal-00910705v1
Deposit thumbnail

Quantification par IRM T2 - Du végétal au cerveau

Benjamin Prigent , Julie Coloigner , Marc Lapert , Erick Jorge Canales-Rodríguez , Guylaine Collewet et al.

SFRMBM 2025 - Société Française de Résonance Magnétique en Biologie et Médecine, Mar 2025, Saint-Malo, France. 2025

Poster de conférence hal-05241198v1
Deposit thumbnail

SOS-MUSIC: A subspace approach for EEG source imaging promoting sparsity of active sources

Carla Joud , Laurent Albera , Julie Coloigner , Isabelle Merlet

EUSIPCO 2024 - 32nd European signal processing conference, Aug 2024, Lyon, France. pp.1-1, 2024

Poster de conférence hal-04685536v1
Deposit thumbnail

Imaging biomarker discovery in major depressive disorder with diffusion MRI multi-compartment models

Renaud Hedouin , Olivier Commowick , Gabriel Robert , Julie Coloigner

OHBM 2022 - 28th Annual Meeting of the Organization of Human Brain Mapping, Jun 2022, Glasgow, United Kingdom. pp.1-1

Poster de conférence inserm-03934921v1

The effect of neurofeedback training on effective connectivity assessed with dynamic causal modeling in stroke patients – a pilot study

Giulia Lioi , Adolfo Veliz , Julie Coloigner , Quentin Duché , Simon Butet et al.

WFNR 2020 - World Federation For NeuroRehabilitation, Oct 2020, Lyon, France

Poster de conférence hal-03354319v1
Deposit thumbnail

White matter connectivity analysis in patients suffering from depression.

Julie Coloigner , Jean-Marie Batail , Isabelle Corouge , Dominique Drapier , Christian Barillot

2018 - 7ème Forum de l’Institut de Psychiatrie, Sep 2018, Amiens, France. pp.1

Poster de conférence hal-01890087v1
Deposit thumbnail

Diffuse T1-MRI White Matter Volume Decrease in Patients with Sickle Cell Disease

Soyoung Choi , Adam Bush , Matt Borzage , Anand Joshi , Vidya Rajagopalan et al.

21sy Annual meeting of the Organization for Human Brain Mapping, Apr 2015, Honolulu, HI, United States.

Poster de conférence hal-01792279v1