Julie Lao

27
Documents

Publications

Publications

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Pre-existing β-lactamase gene diversity is associated with lower risk of ESBL-producing Enterobacterales colonization in patients exposed to ceftriaxone

Quentin Le Bastard , Rémi Gschwind , Julie Lao , Marie-Anne Vibet , Eric Batard et al.

Gut microbes, 2026, 18 (1), pp.2627692. ⟨10.1080/19490976.2026.2627692⟩

Article dans une revue inserm-05506429v1
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ResFinderFG v2.0: a database of antibiotic resistance genes obtained by functional metagenomics

Rémi Gschwind , Svetlana Ugarcina Perovic , Maja Weiss , Marie Petitjean , Julie Lao et al.

Nucleic Acids Research, 2023, 51 (W1), pp.W493-W500. ⟨10.1093/nar/gkad384⟩

Article dans une revue inserm-04510976v1
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A New Integrative and Mobilizable Element Is a Major Contributor to Tetracycline Resistance in Streptococcus dysgalactiae subsp. equisimilis

Guillem López de Egea , Aida González-Díaz , Gérard Guédon , Julie Lao , Dàmaris Berbel et al.

Antibiotics, 2023, 12 (3), pp.579. ⟨10.3390/antibiotics12030579⟩

Article dans une revue hal-04085227v1
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Comparative Genome Analysis of Enterococcus cecorum Reveals Intercontinental Spread of a Lineage of Clinical Poultry Isolates

Jeanne Laurentie , Valentin Loux , Christelle Hennequet-Antier , Emilie Chambellon , Julien Deschamps et al.

MSphere, 2023, 8 (2), pp.e0049522. ⟨10.1128/msphere.00495-22⟩

Article dans une revue hal-04004063v1

Prevalence and mobility of integrative and conjugative elements within a Streptomyces natural population

Caroline Choufa , Abdoul-Razak Tidjani , Anthony Gauthier , Manar Harb , Julie Lao et al.

Frontiers in Microbiology, 2022, 13, ⟨10.3389/fmicb.2022.970179⟩

Article dans une revue hal-03775996v1
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ICEscreen: a tool to detect Firmicute ICEs and IMEs, isolated or enclosed in composite structures

Julie Lao , Thomas Lacroix , Gérard Guédon , Charles Coluzzi , Sophie Payot et al.

NAR Genomics and Bioinformatics, 2022, 4 (4), pp.lqac079. ⟨10.1093/nargab/lqac079⟩

Article dans une revue hal-03832376v1
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FirmiData: a set of 40 genomes of Firmicutes with a curated annotation of ICEs and IMEs

Gérard Guédon , Julie Lao , Sophie Payot , Thomas Lacroix , Hélène Chiapello et al.

BMC Research Notes, 2022, 15 (1), pp.157. ⟨10.1186/s13104-022-06036-w⟩

Article dans une revue (data paper) hal-03971919v1
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Abundance, Diversity and Role of ICEs and IMEs in the Adaptation of Streptococcus salivarius to the Environment

Julie Lao , Gérard Guédon , Thomas Lacroix , Florence Charron-Bourgoin , Virginie Libante et al. Article dans une revue hal-02922962v1
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A New Strategy to Reduce Influenza Escape: Detecting Therapeutic Targets Constituted of Invariance Groups

Julie Lao , Anne Vanet

Viruses, 2017, 9 (3), pp.38. ⟨10.3390/v9030038⟩

Article dans une revue hal-01898706v1

ABRomics : Une plateforme basée sur Galaxy pour la recherche sur la résistance aux antibiotiques et la santé publique

Cléa Siguret , Bérénice Batut , Raphaël Tackx , Julie Lao , Amanda Dieuaide et al.

Journée d’animation annuelle de la plateforme AuBi 2024, Plateforme Auvergne Bioinformatique (AuBi), Dec 2024, Aubière / Clermont-Ferrand, France

Communication dans un congrès hal-05084079v1

ABRomics: An integrated multi-omics platform for antibiotic resistance research and public health

Julie Lao , Pierre Marin , Romain Dallet , Fabien Mareuil , Alix De Toisy et al.

18ème congrès national de la SFM: MICROBES 2023, Société Français de Microbiologie, Oct 2023, Le couvant des Jacobins, Rennes, France

Communication dans un congrès hal-04369101v1

ICEscreen: a valuable tool for automatic detection of ICEs and IMEs in Firmicutes

Nathalie N. Leblond-Bourget , Julie Lao , Sophie Payot , Thomas Lacroix , Gérard Guédon et al.

Réunion du GDR3546 Eléments transposables, Dec 2022, Paris, France

Communication dans un congrès hal-04232460v1

Mobile Genetic Elements transferring by conjugation in the human commensal bacterium Streptococcus salivarius: abundance, diversity and role in the adaptation to environment.

Julie Lao , Gérard Guédon , Thomas Lacroix , Florence Charron-Bourgoin , Virginie Libante et al.

Réunion du GDR3546 Eléments transposables, Dec 2021, Paris, France

Communication dans un congrès hal-03495840v1

The ICE/IME Finder approach and its application to ICE/IME annotation in Streptococcus.

Charles Coluzzi , Julie Lao , Gérard Guédon , Marie-Dominique Devignes , Chloé Ambroset et al.

8th symposium on Antimicrobial Resistance in Animal and Environment, Jul 2019, Tours, France

Communication dans un congrès hal-02974531v1
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The ABRomics platform — a One Health Antimicrobial resistance analysis service

Julie Lao , Raphael Tackx , Pierre Marin , Amanda Dieuaide , Thomas Mignon et al.

Journées Ouvertes en Biologie, Informatique, et Mathématiques - 2024, Jun 2024, Toulouse, France

Poster de conférence hal-04618645v1
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ABRomics: A Galaxy-based one health antimicrobial resistance platform

Pierre Marin , Bérénice Batut , Kenzo-Hugo Hillion , Clea Siguret , Raphael Tackx et al.

GCC 2024 - Galaxy Community Conference 2024, Jun 2024, Brno, Czech Republic. , ⟨10.7490/f1000research.1119762.1⟩

Poster de conférence hal-04619528v1
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ABRomics: An integrated multi-omics platform for antibiotic resistance research and public health

Julie Lao , Pierre Marin , Romain Dallet , Fabien Mareuil , Alix De Toisy et al.

9ème symposium sur la résistance aux antimicrobiens chez les animaux et dans l'environnement (ARAE 2023), Jul 2023, Vinci International Convention Centre, Tours, France

Poster de conférence hal-04369175v1
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ABRomics: An integrated multi-omics platform for antibiotic resistance research and public health

Julie Lao , Pierre Marin , Romain Dallet , Fabien Mareuil , Alix De Thoisy et al.

Journées Ouvertes en Biologie, Informatique et Mathématiques (JOBIM ) 2023, Jun 2023, Plouzané, France

Poster de conférence hal-04369161v1
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ABRomics - an open access online platform on antimicrobial resistance to store, integrate, analyze and share multi-omics data

Julie Lao , Pierre Marin , Romain Dallet , Fabien Mareuil , Alix De Toisy et al.

FEMS 2023 European Congress of Microbiology, Jul 2023, Congress Center Hamburg Hamburg, Germany, Germany

Poster de conférence hal-04369134v1
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ABRomics - a digital platform on antimicrobial resistance to store, integrate, analyze and share multi-omics data

Pierre Marin , Julie Lao , Kenzo-Hugo Hillion , Aurélien Birer , Nadia Goué et al.

JOURNÉES OUVERTES EN BIOLOGIE, INFORMATIQUE ET MATHÉMATIQUES ( JOBIM ) 2022, Jul 2022, Rennes, France. Actes JOBIM 2022

Poster de conférence hal-04369049v1

Abundance and diversity of Mobile Genetic Elements carrying antibiotic resistance genes and transferring by conjugation in the human commensal bacterium Streptococcus salivarius.

Sophie Payot , Julie Lao , Gérard Guédon , Thomas Lacroix , Florence Charron-Bourgoin et al.

5th International Caparica Congress in Antibiotic Resistance (IC2AR 2022), Sep 2022, Caparica, Lisbon, Portugal

Poster de conférence hal-04232454v1

The ICE/IME Finder approach and its application to ICE/IME annotation in Streptococcus

Charles Coluzzi , Julie Lao , Gérard Guédon , Marie-Dominique Devignes , Chloé Ambroset et al.

4th International Workshop on Streptococcus suis, Jun 2019, Montréal, Canada.

Poster de conférence hal-02974525v1
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Towards an integrated approach for the annotation of ICEs and IMEs in bacterial genomes

Julie Lao , Gérard Guédon , Thomas Lacroix , Nathalie N. Leblond-Bourget , Helene H. Chiapello

JOBIM 2018, Jul 2018, Marseille, France

Poster de conférence hal-01829606v1
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Comparison of statistical methods of inference of cooccurrence networks within micro- bial ecosystems from metagenomics data

Sophie Schbath , Mahendra Mariadassou , Julie Lao

JOBIM 2017 - Journées Ouvertes Biologie Informatique Mathématiques, Jul 2017, Lille, France. , pp.234, 2017, JOBIM 2017

Poster de conférence hal-01563604v1