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Using phenomic selection to predict hybrid values with NIR spectra measured on the parental lines: proof of concept on maize
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Improvement in genomic prediction of maize with prior gene ontology information depends on traits and environmental conditions
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High-dimensional multi-omics measured in controlled conditions are useful for maize platform and field trait predictions
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Assessing the potential of genetic resource introduction into elite germplasm: a collaborative multiparental population for flint maize
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Robotized indoor phenotyping allows genomic prediction of adaptive traits in the field
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Identifying QTLs involved in hybrid performance and heterotic group complementarity: new GWAS models applied to factorial and admixed diallel maize hybrid panels
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Improving the use of plant genetic resources to sustain breeding programs’ efficiency
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Detecting directional and non-directional epistasis in bi-parental populations using genomic data
Simon Rio
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Genomic prediction for grain yield and micro-environmental sensitivity in winter wheat
Miguel Raffo
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Genetic Architecture of Powdery Mildew Resistance Revealed by a Genome-Wide Association Study of a Worldwide Collection of Flax (Linum usitatissimum L.)
Adrien Speck
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Improving genomic predictions with inbreeding and nonadditive effects in two admixed maize hybrid populations in single and multienvironment contexts
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Genomic prediction of hybrid performance: comparison of the efficiency of factorial and tester designs used as training sets in a multiparental connected reciprocal design for maize silage
Alizarine Lorenzi
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Unravelling cucumber resistance to several viruses via genome-wide association studies highlighted resistance hotspots and new QTLs
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Deciphering the Genetic Architecture of Plant Virus Resistance by GWAS, State of the Art and Potential Advances
Severine Monnot
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Genomic Prediction of Hybrid Crops Allows Disentangling Dominance and Epistasis
David González-Diéguez
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Genetic basis of phenotypic plasticity and genotype × environment interactions in a multi-parental tomato population
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Concevoir et évaluer les maïs du futur
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Quantitative Trait Loci involved in the reproductive success of a parasitoid wasp
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Revisiting hybrid breeding designs using genomic predictions: simulations highlight the superiority of incomplete factorials between segregating families over topcross designs
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Genomic prediction with a maize collaborative panel: identification of genetic resources to enrich elite breeding programs
Antoine Allier
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Accounting for Group-Specific Allele Effects and Admixture in Genomic Predictions: Theory and Experimental Evaluation in Maize
Simon Rio
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Optimized breeding strategies to harness genetic resources with different performance levels
Antoine Allier
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Disentangling group specific QTL allele effects from genetic background epistasis using admixed individuals in GWAS: An application to maize flowering
Simon Rio
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X-chromosome meiotic drive in Drosophila simulans: a QTL approach reveals the complex polygenic determinism of Paris drive suppression
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Training set optimization of genomic prediction by means of EthAcc
Brigitte Mangin
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Improving Short- and Long-Term Genetic Gain by Accounting for Within-Family Variance in Optimal Cross-Selection
Antoine Allier
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Water deficit-responsive QTLs for cell wall degradability and composition in maize at silage stage
Laetitia Virlouvet
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Quantitative trait loci mapping in hybrids between Dent and Flint maize multiparental populations reveals group-specific QTL for silage quality traits with variable pleiotropic effects on yield
Adama I Seye
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hal-02617673
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Assessment of breeding programs sustainability: application of phenotypic and genomic indicators to a north european grain maize program
Antoine Allier
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Water Deficit-Responsive QTLs for Cell Wall Degradability and Composition in Maize at Silage Stage
Laëtitia Virlouvet
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Common gardens in teosintes reveal the establishment of a syndrome of adaptation to altitude
Margaux-Alison Fustier
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Genomic selection efficiency and a priori estimation of accuracy in a structured dent maize panel
Simon Rio
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hal-02625890
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Usefulness criterion and post-selection parental contributions in multi-parental crosses: Application to polygenic trait Introgression
Antoine Allier
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Alain Charcosset
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hal-02620266
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Linkage analysis and association mapping QTL detection models for hybrids between multiparental populations from two heterotic groups: application to biomass production in maize (Zea mays L.).
Héloïse Giraud
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Reciprocal genetics: identifying QTL for general and specific combining abilities in hybrids between multiparental populations from two maize (Zea mays L.) heterotic groups
Héloïse Giraud
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hal-03818440
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Predicting genomic selection efficiency to optimize calibration set and to assess prediction accuracy in highly structured populations
Renaud Rincent
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hal-01583795
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Genotyping-by-sequencing highlights original diversity patterns within a European collection of 1191 maize flint lines, as compared to the maize USDA genebank
Brigitte Gouesnard
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hal-01595534
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General and specific combining abilities in a maize (Zea mays L.) test-cross hybrid panel: relative importance of population structure and genetic divergence between parents
Amandine Lariepe
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hal-01481772
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Clusthaplo: a plug-in for MCQTL to enhance QTL detection using ancestral alleles in multi-cross design.
Damien Leroux
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hal-02634532
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Usefulness of Multiparental Populations of Maize (Zea mays L.) for Genome-Based Prediction
Christina Lehermeier
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hal-02636667
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Dent and flint maize diversity panels reveal important genetic potential for increasing biomass production
Renaud Rincent
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hal-02637142
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Linkage disequilibrium with linkage analysis of multiline crosses reveals different multiallelic QTL for hybrid performance in the flint and dent heterotic groups of maize.
Héloïse Giraud
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hal-02637060
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Recovering power in Association Mapping Panels with variable levels of linkage disequilibrium
Renaud Rincent
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hal-02634244
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OptiMAS: A Decision Support Tool for Marker-Assisted Assembly of Diverse Alleles
Fabio Valente
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hal-02646077
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Combined linkage and linkage disequilibrium QTL mapping in multiple families of maize (Zea mays L.) line crosses highlights complementarities between models based on parental haplotype and single locus polymorphism
Nicolas Bardol
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Article dans une revue
istex
hal-02642570
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Maximizing the reliability of genomic selection by optimizing the calibration set of reference individuals: comparison of methods in two diverse groups of maize inbreds (Zea mays L.)
Renaud Rincent
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hal-01019845
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Diversity and linkage disequilibrium features in a composite public/private dent maize panel: consequences for association genetics as evaluated from a case study using flowering time
Marion Truntzler
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hal-02643782
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The genetic basis of heterosis: multiparental quantitative trait loci mapping reveals contrasted levels of apparent overdominance among traits of agronomical interest in maize (Zea mays L.)
Amandine Lariepe
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Article dans une revue
hal-00986094
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QTLs and candidate genes for desiccation and abscisic acid content in maize kernels
Valérie Capelle
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Article dans une revue
hal-02662839
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The genetic architecture of grain yield and related traits in Zea maize L. revealed by comparing intermated and conventional populations
Yung-Fen Huang
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hal-02661097
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Genetic map construction and quantitative trait loci (QTL) mapping for nitrogen use efficiency and its relationship with productivity and quality of the biennial crop Belgian endive (Cichorium intybus L.)
Laurent Cassan
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Samuel Segouin
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Article dans une revue
istex
hal-02662433
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Meta-analysis of QTL involved in silage quality of maize and comparison with the position of candidate genes
Marion Truntzler
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Article dans une revue
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hal-02663445
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Fine mapping and haplotype structure analysis of a major flowering time quantitative trait locus on maize chromosome 10
Sebastien Ducrocq
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Valerie V. Combes
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Article dans une revue
hal-02667927
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Quantitative trait loci for leaf length in perennial ryegrass (Lolium perenne L.)
Philippe P. Barre
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F. Mi
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Article dans une revue
istex
hal-02660303
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Overview of QTL detection in plants and tests for synergistic epistatic interactions
Jean-Luc J.-L. Jannink
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Article dans une revue
istex
hal-00964463
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Leaf yellowing and anthocyanin accumulation are two genetically independent strategies in response to nitrogen limitation in Arabidopsis thaliana
Celine Diaz
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Véra Saliba-Colombani
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Article dans une revue
hal-02661380
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Results of a whole genome scan targeting QTL for growth and carcass traits in a Piétrain $\times$ Large White intercross
Carine Nezer
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Danny Wagenaar
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Article dans une revue
hal-00894417
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A method to optimize selection on multiple identified quantitative trait loci
Reena Chakraborty
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Article dans une revue
hal-00894405
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Optimal selection on two quantitative trait loci with linkage
Jack Dekkers
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Reena Chakraborty
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Article dans une revue
hal-00894406
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