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Luca Ciandrini

23
Documents

Publications

Ribosome economics: Ribosome usage in translation initiation and elongation

Luca Ciandrini
Reverse mathematical methods for reconstructing molecular dynamics in single cell, Centro di Ricerca Matematica Ennio de Giorgi, Oct 2018, Pisa, Italy
Communication dans un congrès hal-01935528v1

Deciphering mRNA sequence determinants of protein production rate

Luca Ciandrini
Biophysics: Today and Beyond, Joint Meeting GRISBI; Labex EpiGenMed; Labex NUMEV, Apr 2018, Montpellier, France
Communication dans un congrès hal-01938431v1

Ribosome Economics: Ribosome usage, translation initiation and elongation

Luca Ciandrini
Integrative Cell Models for Disease Intervention, Banff International Research Station, Jun 2018, Banff, Canada
Communication dans un congrès hal-01938095v1

Codon bias and cost of ribosome usage

Luca Ciandrini
Statistical physics of cells and genomes, Marco Cosentino Lagomarsino (CNRS/Sorbonne; Paris and IFOM Milan), May 2018, Alghero, Italy
Communication dans un congrès hal-01938405v1

Driven transport on a polymer: a model inspired by transcription and translation

Luca Ciandrini
Rencontre de Physique Statistique, Jan 2018, Paris, France
Communication dans un congrès hal-01938456v1

Gene length as a regulator for ribosome recruitment and protein synthesis: theoretical insights

Luca Ciandrini
Meeting of the International Physics of Living Systems (iPoLS) Network, Jun 2017, Paris, France
Communication dans un congrès hal-01938945v1

Cellular Tradeoff between Resources and Demand in gene Expression

Luca Ciandrini
Como Pohskrow, Oct 2016, Como, Italy
Communication dans un congrès hal-01939053v1

A quantitative view on mRNA translation: the relative role of initiation and elongation

Luca Ciandrini
Quantitative Laws II: Physiology, ecology, interaction structures, collective behavior, Jun 2016, Como, Italy
Communication dans un congrès hal-01939004v1

Transcript length as a main determinant of mRNA translation efficiency

Luca Ciandrini
Quantitative Methods in Gene Regulation III, Dec 2015, Cambridge, United Kingdom
Communication dans un congrès hal-01939067v1

Ribosome recycling as a main determinant of experimental ribosome densities

Luca Ciandrini
EMBO fellows’ meeting, Jun 2015, Heidelberg, Germany
Communication dans un congrès hal-01939095v1

Crowded mRNAs and translation efficiency: from theory to experiments and speculations

Luca Ciandrini
Chromosome Structure and Function: Experiments and Modeling, SISSA, Oct 2013, Trieste, Italy
Communication dans un congrès hal-01939133v1

Quantifying gene expression at the level of translation

Luca Ciandrini
Quantitative Laws of Genome Evolution, Jun 2013, Como, Italy
Communication dans un congrès hal-01939022v1

Fluctuations and cooperative properties of molecular motors: from theory to experiments

Luca Ciandrini
Traffic and Granular Flow '13, Sep 2013, Juelich, Germany
Communication dans un congrès hal-01939150v1

Stepping and crowding ofmolecular motors: from theory to mRNA translation

Luca Ciandrini
Paris Biological Physics Community Day, Dec 2013, Paris, France
Communication dans un congrès hal-01939123v1

Molecular Motors with a Stepping Cycle: From Theory to Experiments

Luca Ciandrini
Traffic and Granular Flow '13, Sep 2013, Julich, Germany. pp.619-627, ⟨10.1007/978-3-319-10629-8_70⟩
Communication dans un congrès hal-01103149v1

Predicting the steady-state rate of mRNA translation in protein biosynthesis

Juraj Szavits-Nossan , Luca Ciandrini , Carmen Maria Romano
19th IUPAB congress and 11th EBSA congress, Jul 2017, Edinburgh, United Kingdom
Poster de conférence hal-01938988v1

Genelength as a regulator for ribosome recruitmentand protein synthesis: theoretical insights

Luca Ciandrini
Protein Synthesis and Translational Control, Sep 2017, Heidelberg, Germany
Poster de conférence hal-01938973v1
Image document

Inferring efficiency of translation initiation and elongation from ribosome profiling

Juraj Szavits-Nossan , Luca Ciandrini
Nucleic Acids Research, 2020, 48, pp.9478 - 9490. ⟨10.1093/nar/gkaa678⟩
Article dans une revue hal-03980481v1

Driven transport on a flexible polymer with particle recycling: A model inspired by transcription and translation

Lucas Dias Fernandes , Luca Ciandrini
Physical Review E , 2019, 99 (5), pp.052409. ⟨10.1103/PhysRevE.99.052409⟩
Article dans une revue hal-01743450v1
Image document

Deciphering mRNA Sequence Determinants of Protein Production Rate

Juraj Szavits-Nossan , Luca Ciandrini , M. Carmen Romano
Physical Review Letters, 2018, 120, pp.128101. ⟨10.1103/PhysRevLett.120.128101⟩
Article dans une revue hal-01585251v1
Image document

Power series solution of the inhomogeneous exclusion process

Juraj Szavits-Nossan , M. Carmen Romano , Luca Ciandrini
Physical Review E : Statistical, Nonlinear, and Soft Matter Physics, 2018, 97, pp.052139. ⟨10.1103/PhysRevE.97.052139⟩
Article dans une revue hal-01737998v1
Image document

Gene length as a regulator for ribosome recruitment and protein synthesis: theoretical insights

Lucas Dias Fernandes , Alessandro de Moura , Luca Ciandrini
Scientific Reports, 2017, 7, pp.17409. ⟨10.1038/s41598-017-17618-1⟩
Article dans une revue hal-01585262v1
Image document

Identification of the mRNA targets of tRNA-specific regulation using genome-wide simulation of translation.

Barbara Gorgoni , Luca Ciandrini , Matthew R Mcfarland , M Carmen Romano , Ian Stansfield
Nucleic Acids Research, 2016, 44 (19), pp.9231-9244. ⟨10.1093/nar/gkw630⟩
Article dans une revue hal-02060317v1