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Intrahepatic levels of microbiome-derived hippurate associates with improved metabolic dysfunction-associated steatotic liver disease.
Maxime Deslande
,
Francesc Puig Castellvi
,
Romina Pacheco Tapia
,
Violeta Raverdy
,
Robert Caiazzo
et al.
Article dans une revue
hal-05051923
v1
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Multiomics of the intestine-liver-adipose axis in multiple studies unveils a consistent link of the gut microbiota and the antiviral response with systemic glucose metabolism
Anna Castells-Nobau
,
José Maria Moreno-Navarrete
,
Lisset de la Vega-Correa
,
Irene Puig
,
Massimo Federici
et al.
Article dans une revue
hal-04799588
v1
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Author Correction: Para-infectious brain injury in COVID-19 persists at follow-up despite attenuated cytokine and autoantibody responses
Benedict Michael
,
Cordelia Dunai
,
Edward Needham
,
Kukatharmini Tharmaratnam
,
Robyn Williams
et al.
Article dans une revue
hal-04799591
v1
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Delayed Mucosal Antiviral Responses Despite Robust Peripheral Inflammation in Fatal COVID-19
Jasmin Sidhu
,
Matthew Siggins
,
Felicity Liew
,
Clark Russell
,
Ashley Uruchurtu
et al.
Article dans une revue
hal-04799587
v1
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Genomic attributes of airway commensal bacteria and mucosa
Leah Cuthbertson
,
Ulrike Löber
,
Jonathan Ish-Horowicz
,
Claire Mcbrien
,
Colin Churchward
et al.
Article dans une revue
hal-04528672
v1
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Large-scale phenotyping of patients with long COVID post-hospitalization reveals mechanistic subtypes of disease
Felicity Liew
,
Claudia Efstathiou
,
Sara Fontanella
,
Matthew Richardson
,
Ruth Saunders
et al.
Article dans une revue
hal-04799586
v1
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ADVANCE-TBI study protocol: traumatic brain injury outcomes in UK military personnel serving in Afghanistan between 2003 and 2014 – a longitudinal cohort study
Neil Graham
,
Grace Blissitt
,
Karl Zimmerman
,
Daniel Friedland
,
Marc-Emmanuel M.-E. Dumas
et al.
Article dans une revue
hal-04528663
v1
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Advances in the integration of metabolomics and metagenomics for human gut microbiome and their clinical applications
Francesc Puig-Castellví
,
Romina Pacheco-Tapia
,
Maxime Deslande
,
Manyi Jia
,
Petros Andrikopoulos
et al.
Article dans une revue
(article de synthèse)
hal-04442375
v1
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Evidence of a causal and modifiable relationship between kidney function and circulating trimethylamine N-oxide
Petros Andrikopoulos
,
Judith Aron-Wisnewsky
,
Rima Chakaroun
,
Antonis Myridakis
,
Sofia K Forslund
et al.
Article dans une revue
hal-04442366
v1
|
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Para-infectious brain injury in COVID-19 persists at follow-up despite attenuated cytokine and autoantibody responses
Benedict Michael
,
Cordelia Dunai
,
Edward Needham
,
Kukatharmini Tharmaratnam
,
Robyn Williams
et al.
Article dans une revue
hal-04528685
v1
|
|
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Delayed Mucosal Antiviral Responses Despite Robust Peripheral Inflammation in Fatal COVID-19
Jasmin Sidhu
,
Matthew Siggins
,
Felicity Liew
,
Clark Russell
,
Ashley Uruchurtu
et al.
Article dans une revue
hal-04528682
v1
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Potential therapeutic implications of histidine catabolism by the gut microbiota in NAFLD patients with morbid obesity
Sergio Quesada-Vázquez
,
Anna Castells-Nobau
,
Jèssica Latorre
,
Núria Oliveras-Cañellas
,
Irene Puig-Parnau
et al.
Article dans une revue
hal-04528666
v1
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Impairment of gut microbial biotin metabolism and host biotin status in severe obesity: effect of biotin and prebiotic supplementation on improved metabolism
Eugeni Belda
,
Lise Voland
,
Valentina Tremaroli
,
Gwen Falony
,
Solia Adriouch
et al.
Article dans une revue
hal-03873157
v1
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High Resolution Ambient MS Imaging of Biological Samples by Desorption Electro-Flow Focussing Ionization
Vincen Wu
,
Jocelyn Tillner
,
Emrys Jones
,
James Mckenzie
,
Dipa Gurung
et al.
Article dans une revue
hal-04528656
v1
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The gut metabolite indole-3 propionate promotes nerve regeneration and repair
Elisabeth Serger
,
Lucia Luengo-Gutierrez
,
Jessica Chadwick
,
Guiping Kong
,
Luming Zhou
et al.
Article dans une revue
hal-03873141
v1
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Metabolomic and microbiome profiling reveals personalized risk factors for coronary artery disease
Yeela Talmor-Barkan
,
Noam Bar
,
Aviv Shaul
,
Nir Shahaf
,
Anastasia Godneva
et al.
Article dans une revue
hal-03873145
v1
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Implementation of corticosteroids in treatment of COVID-19 in the ISARIC WHO Clinical Characterisation Protocol UK: prospective, cohort study
Fiina Närhi
,
S Ramani Moonesinghe
,
Susan Shenkin
,
Thomas Drake
,
Rachel Mulholland
et al.
Article dans une revue
hal-03873143
v1
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SARS-CoV-2 Omicron-B.1.1.529 leads to widespread escape from neutralizing antibody responses
Wanwisa Dejnirattisai
,
Jiandong Huo
,
Daming Zhou
,
Jiří Zahradník
,
Piyada Supasa
et al.
Article dans une revue
hal-03873154
v1
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Microbiome and metabolome features of the cardiometabolic disease spectrum
Sebastien Fromentin
,
Sofia Forslund
,
Kanta Chechi
,
Judith Aron-Wisnewsky
,
Rima Chakaroun
et al.
Article dans une revue
hal-04008034
v1
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Microbiome and metabolome features of the cardiometabolic disease spectrum
Sebastien Fromentin
,
Sofia Forslund
,
Kanta Chechi
,
Judith Aron-Wisnewsky
,
Rima Chakaroun
et al.
Article dans une revue
pasteur-03692581
v1
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Viral Coinfections in Hospitalized Coronavirus Disease 2019 Patients Recruited to the International Severe Acute Respiratory and Emerging Infections Consortium WHO Clinical Characterisation Protocol UK Study
Elen Vink
,
Chris Davis
,
Alasdair Maclean
,
David Pascall
,
Sarah Mcdonald
et al.
Article dans une revue
hal-03873149
v1
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ITCH E3 ubiquitin ligase downregulation compromises hepatic degradation of branched-chain amino acids
Rossella Menghini
,
Lesley Hoyles
,
Marina Cardellini
,
Viviana Casagrande
,
Arianna Marino
et al.
Article dans une revue
hal-03873153
v1
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Human and preclinical studies of the host–gut microbiome co-metabolite hippurate as a marker and mediator of metabolic health
François Brial
,
Julien Chilloux
,
Trine Nielsen
,
Sara Vieira-Silva
,
Gwen Falony
et al.
Article dans une revue
hal-03451210
v1
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Iron status influences non-alcoholic fatty liver disease in obesity through the gut microbiome
Jordi Mayneris-Perxachs
,
Marina Cardellini
,
Lesley Hoyles
,
Jèssica Latorre
,
Francesca Davato
et al.
Article dans une revue
hal-03451206
v1
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|
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The impact of viral mutations on recognition by SARS-CoV-2 specific T cells
Marc-Emmanuel Dumas
,
Thushan de Silva
,
Guihai Liu
,
Benjamin Lindsey
,
Danning Dong
et al.
Article dans une revue
hal-03451248
v1
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An integrated workflow for enhanced taxonomic and functional coverage of the mouse fecal metaproteome
Nicolas Nalpas
,
Lesley Hoyles
,
Viktoria Anselm
,
Tariq Ganief
,
Laura Martinez-Gili
et al.
Article dans une revue
hal-03451223
v1
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|
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A targeted ultra performance liquid chromatography – Tandem mass spectrometric assay for tyrosine and metabolites in urine and plasma: Application to the effects of antibiotics on mice
Marc-Emmanuel Dumas
,
Marine Letertre
,
Antonis Myridakis
,
Luke Whiley
,
Stéphane Camuzeaux
et al.
Article dans une revue
hal-03451217
v1
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|
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Combinatorial, additive and dose-dependent drug–microbiome associations
Sofia Forslund
,
Rima Chakaroun
,
Maria Zimmermann-Kogadeeva
,
Lajos Markó
,
Judith Aron-Wisnewsky
et al.
Article dans une revue
hal-03873160
v1
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Characterisation of in-hospital complications associated with COVID-19 using the ISARIC WHO Clinical Characterisation Protocol UK: a prospective, multicentre cohort study
Marc-Emmanuel Dumas
,
Thomas Drake
,
Aya Riad
,
Cameron Fairfield
,
Conor Egan
et al.
Article dans une revue
hal-03451256
v1
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|
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A prenylated dsRNA sensor protects against severe COVID-19
Marc-Emmanuel Dumas
,
Arthur Wickenhagen
,
Elena Sugrue
,
Spyros Lytras
,
Srikeerthana Kuchi
et al.
Article dans une revue
hal-03451263
v1
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The microbial metabolite p-Cresol induces autistic-like behaviors in mice by remodeling the gut microbiota
Patricia Bermudez-Martin
,
Jérôme Becker
,
Nicolas Caramello
,
Sebastian P Fernandez
,
Renan Costa-Campos
et al.
Article dans une revue
hal-03434993
v1
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Dominant gut Prevotella copri in gastrectomised non-obese diabetic Goto–Kakizaki rats improves glucose homeostasis through enhanced FXR signalling
Noémie Péan
,
Aurelie Le Lay
,
Francois Brial
,
Jessica Wasserscheid
,
Claude Rouch
et al.
Article dans une revue
hal-03089346
v1
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|
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The APOA1bp–SREBF–NOTCH axis is associated with reduced atherosclerosis risk in morbidly obese patients
Jordi Mayneris-Perxachs
,
Josep Puig
,
Rémy Burcelin
,
Marc-Emmanuel Dumas
,
Richard Barton
et al.
Article dans une revue
hal-05054556
v1
|
|
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Author Correction: Imidazole propionate is increased in diabetes and associated with dietary patterns and altered microbial ecology
Antonio Molinaro
,
Pierre Bel Lassen
,
Marcus Henricsson
,
Hao Wu
,
Solia Adriouch
et al.
Article dans une revue
inserm-03970363
v1
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Imidazole propionate is increased in diabetes and associated with dietary patterns and altered microbial ecology
Pierre Bel Lassen
,
Trine Nielsen
,
Per-Olof Bergh
,
Christine Rouault
,
Sébastien André
et al.
Article dans une revue
hal-03041270
v2
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Statin therapy is associated with lower prevalence of gut microbiota dysbiosis
Sara Vieira-Silva
,
Gwen Falony
,
Eugeni Belda
,
Trine Nielsen
,
Judith Aron-Wisnewsky
et al.
Article dans une revue
hal-02964351
v1
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|
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The Natural Metabolite 4-Cresol Improves Glucose Homeostasis and Enhances β-Cell Function
Francois Brial
,
Fawaz Alzaid
,
Kazuhiro Sonomura
,
Yoichiro Kamatani
,
Kelly Meneyrol
et al.
Article dans une revue
hal-03089353
v1
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|
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Diet-induced metabolic changes of the human gut microbiome: importance of short-chain fatty acids, methylamines and indoles
Mohd Badrin Hanizam Abdul Rahim
,
Julien Chilloux
,
Laura Martinez-Gili
,
Ana Luisa Neves
,
Antonis Myridakis
et al.
Article dans une revue
hal-03089354
v1
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The translational regulator FMRP controls lipid and glucose metabolism in mice and humans
Antoine Leboucher
,
Didier Pisani
,
Laura Martinez-Gili
,
Julien Chilloux
,
Patricia Bermudez-Martin
et al.
Article dans une revue
hal-03006175
v1
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|
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Diet-induced metabolic changes of the human gut microbiome: importance of short-chain fatty acids, methylamines and indoles
Mohd Badrin Hanizam Abdul Rahim
,
Julien Chilloux
,
Laura Martinez-Gili
,
Ana Luisa Neves
,
Antonis Myridakis
et al.
Article dans une revue
hal-03041250
v1
|
|
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The translational regulator FMRP controls lipid and glucose metabolism in mice and humans
Antoine Leboucher
,
Didier Pisani
,
Laura Martinez-Gili
,
Julien Chilloux
,
Patricia Bermudez-Martin
et al.
Article dans une revue
hal-02266400
v1
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|
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A Data Integration Multi-Omics Approach to Study Calorie Restriction-Induced Changes in Insulin Sensitivity
Maria Carlota Dao
,
Nataliya Sokolovska
,
Rémi Brazeilles
,
Séverine Affeldt
,
Véronique Pelloux
et al.
Article dans une revue
hal-02042331
v1
|
|
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Systems Genetics of Hepatic Metabolome Reveals Octopamine as a Target for Non-Alcoholic Fatty Liver Disease Treatment
Francois Brial
,
Aurelie Le Lay
,
Lyamine Hedjazi
,
Tsz Tsang
,
Jane F Fearnside
et al.
Article dans une revue
hal-02090897
v1
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Untargeted Mass Spectrometry Lipidomics identifies correlation between serum sphingomyelins and plasma cholesterol
Pierre Zalloua
,
Hanane Kadar
,
Essa Hariri
,
Layal Abi Farraj
,
Francois Brial
et al.
Article dans une revue
hal-02049254
v1
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|
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pJRES Binning Algorithm (JBA): a new method to facilitate the recovery of metabolic information from pJRES 1H NMR spectra
Andrea Rodriguez-Martinez
,
Rafael Ayala
,
Joram M Posma
,
Nikita Harvey
,
Beatriz Jiménez
et al.
Article dans une revue
hal-03089366
v1
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|
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Implication of gut microbiota metabolites in cardiovascular and metabolic diseases
Francois Brial
,
Aurelie Le Lay
,
Marc-Emmanuel Dumas
,
Dominique Gauguier
Article dans une revue
hal-03089369
v1
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|
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Molecular phenomics and metagenomics of hepatic steatosis in non-diabetic obese women
Lesley Hoyles
,
José-Manuel Fernández-Real
,
Massimo Federici
,
Matteo Serino
,
James Abbott
et al.
Article dans une revue
hal-03090150
v1
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Metabolic retroconversion of trimethylamine N-oxide and the gut microbiota
L Hoyles
,
Ml Jimenez-Pranteda
,
J Chilloux
,
F Brial
,
A Myridakis
et al.
Article dans une revue
hal-03105447
v1
|
|
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Publisher Correction: Molecular phenomics and metagenomics of hepatic steatosis in non-diabetic obese women
Lesley Hoyles
,
José-Manuel Fernández-Real
,
Massimo Federici
,
Matteo Serino
,
James Abbott
et al.
Article dans une revue
hal-03144734
v1
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Gut Microbiota Interacts with Markers of Adipose Tissue Browning, Insulin Action and Plasma Acetate in Morbid Obesity
José Maria Moreno-Navarrete
,
Matteo Sérino
,
Vincent Blasco-Baque
,
Vincent Azalbert
,
Richard H. Barton
et al.
Article dans une revue
hal-02627928
v1
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Exploring the Genetic Landscape of Metabolic Phenotypes with MetaboSignal
Andrea Rodriguez-Martinez
,
Rafael Ayala
,
Joram Posma
,
Marc-Emmanuel Dumas
Current Protocols in Bioinformatics, 2018, 61 (1), pp.14.14.1-14.14.13. ⟨10.1002/cpbi.41⟩
Article dans une revue
hal-03089371
v1
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Microbial-host co-metabolites are prodromal markers predicting phenotypic heterogeneity in behavior, obesity, and impaired glucose tolerance
Marc-Emmanuel Dumas
,
Alice R. Rothwell
,
Lesley Hoyles
,
Thomas Aranias
,
Julien Chilloux
et al.
Article dans une revue
hal-01608420
v1
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|
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Topological analysis of metabolic networks integrating co-segregating transcriptomes and metabolomes in type 2 diabetic rat congenic series
Marc-Emmanuel Dumas
,
Céline Domange
,
Sophie Calderari
,
Andrea Rodríguez Martínez
,
Rafael Ayala
et al.
Article dans une revue
hal-01587798
v1
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|
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<em>Akkermansia muciniphila</em> and improved metabolic health during a dietary intervention in obesity: relationship with gut microbiome richness and ecology
Maria Carlota Dao
,
Amandine Everard
,
Judith Aron-Wisnewsky
,
Nataliya Sokolovska
,
Edi Prifti
et al.
Article dans une revue
hal-02639895
v1
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|
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Quantifying Diet-Induced Metabolic Changes of the Human Gut Microbiome
Saeed Shoaie
,
Pouyan Ghaffari
,
Petia Kovatcheva-Datchary
,
Adil Mardinoglu
,
Partho Sen
et al.
Article dans une revue
hal-02634319
v1
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|
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Metabolomics-on-a-chip of hepatotoxicity induced by anticancer drug flutamide and its active metabolite hydroxyflutamide using HepG2/C3a microfluidic biochips
Leila Choucha-Snouber
,
Andrei Bunescu
,
Cécile Legallais
,
Céline Brochot
,
Marc-Emmanuel Dumas
et al.
Article dans une revue
ineris-00963445
v1
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|
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Untargeted metabolome quantitative trait locus mapping associates variation in urine glycerate to mutant glycerate kinase.
Jean-Baptise Cazier
,
Pamela J Kaisaki
,
Karène Argoud
,
Benjamin J. Blaise
,
Kirill Veselkov
et al.
Article dans une revue
hal-00699625
v1
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|
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Metabolomics-on-a-Chip and Predictive Systems Toxicology in Microfluidic Bioartificial Organs
Laetitia Shintu
,
Régis Baudoin
,
Vincent Navratil
,
Jean-Matthieu Prot
,
Clément Pontoizeau
et al.
Article dans une revue
hal-00699575
v1
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|
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Metabolomics-on-a-chip and metabolic flux analysis for label-free modeling of the internal metabolism of HepG2/C3A cells
Djomangan Adama Ouattara
,
Jean-Matthieu Prot
,
Andrei Bunescu
,
Marc-Emmanuel Dumas
,
Bénédicte Elena-Herrmann
et al.
Article dans une revue
ineris-00963393
v1
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|
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Predictive toxicology using systemic biology and liver microfluidic "on chip" approaches: Application to acetaminophen injury
Jean-Matthieu Prot
,
Andrei Bunescu
,
Bénédicte Elena-Herrmann
,
Caroline Aninat
,
Leila Choucha Snouber
et al.
Article dans une revue
hal-00699551
v1
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|
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Broad-ranging natural metabotype variation drives physiological plasticity in healthy control inbred rat strains.
Clément Pontoizeau
,
Jane F. Fearnside
,
Vincent Navratil
,
Céline Domange
,
Jean-Baptiste Cazier
et al.
Article dans une revue
hal-00700437
v1
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|
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Pyruvate imbalance mediates metabolic reprogramming and mimics lifespan extension by dietary restriction in Caenorhabditis elegans.
Laurent Mouchiroud
,
Laurent Molin
,
Prasad Kasturi
,
Mohamed N Triba
,
Marc-Emmanuel Dumas
et al.
Article dans une revue
hal-00720060
v1
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|
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A metabolomic and systems biology perspective on the brain of the fragile X syndrome mouse model.
Laetitia Davidovic
,
Vincent Navratil
,
Carmela M Bonaccorso
,
Maria Vincenza Catania
,
Barbara Bardoni
et al.
Article dans une revue
hal-00724490
v1
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|
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Colonization-induced host-gut microbial metabolic interaction
Sandrine P. S. P. Claus
,
Sandrine L. S. L. Ellero
,
Bernard B. Berger
,
Lutz L. Krause
,
Anne A. Bruttin
et al.
Article dans une revue
hal-01004431
v1
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|
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Metabolic profiling strategy of Caenorhabditis elegans by whole-organism nuclear magnetic resonance.
Benjamin J Blaise
,
Jean Giacomotto
,
Mohamed N Triba
,
Pierre Toulhoat
,
Martial Piotto
et al.
Article dans une revue
hal-00425221
v1
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|
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Metabotyping of Caenorhabditis elegans reveals latent phenotypes
Benjamin J Blaise
,
Jean Giacomotto
,
Bénédicte Elena-Herrmann
,
Marc-Emmanuel Dumas
,
Pierre Toulhoat
et al.
Proceedings of the National Academy of Sciences of the United States of America, 2007, 104 (50), pp.19808-12. ⟨10.1073/pnas.0707393104⟩
Article dans une revue
hal-00294039
v1
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A top‐down systems biology view of microbiome‐mammalian metabolic interactions in a mouse model
François‐pierre Martin
,
Marc‐emmanuel Dumas
,
Yulan Wang
,
Cristina Legido‐quigley
,
Ivan Yap
et al.
Article dans une revue
hal-02912640
v1
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