Marie-Christine Carpentier

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Documents

Publications

Publications

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Regulation of co-translational mRNA decay by PAP and DXO1 in Arabidopsis

Marie-Christine Carpentier , Anne-Elodie Receveur , Adrien Cadoudal , Rémy Merret
BMC Plant Biology, 2025, 25 (1), pp.223. ⟨10.1186/s12870-025-06195-5⟩
Article dans une revue hal-04953592 v1
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Multi-transcriptomics identifies targets of the endoribonuclease DNE1 and highlights its coordination with decapping

Aude Pouclet , David Pflieger , Rémy Merret , Marie-Christine Carpentier , Marlene Schiaffini et al.
The Plant cell, 2024, 36 (9), pp.3674-3688. ⟨10.1093/plcell/koae175⟩
Article dans une revue hal-04614989 v1
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Genome-wide analysis of mRNA decay in Arabidopsis shoot and root reveals the importance of co-translational mRNA decay in the general mRNA turnover

Marie-Christine Carpentier , Anne-Elodie Receveur , Alexandre Boubegtitene , Adrien Cadoudal , Cécile Bousquet-Antonelli et al.
Nucleic Acids Research, 2024, ⟨10.1093/nar/gkae363⟩
Article dans une revue hal-04599495 v1
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Plant response to intermittent heat stress involves modulation of mRNA translation efficiency

Arnaud Dannfald , Marie-Christine Carpentier , Rémy Merret , Jean-Jacques Favory , Jean-Marc Deragon
Plant Physiology, 2024, 197 (2), pp.kiae648. ⟨10.1093/plphys/kiae648⟩
Article dans une revue hal-04874246 v1
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The unique dual targeting of AGO1 by two types of PRMT enzymes promotes phasiRNA loading in Arabidopsis thaliana

Clément Barre-Villeneuve , Michèle Laudié , Marie-Christine Carpentier , Lauriane Kuhn , Thierry Lagrange et al.
Nucleic Acids Research, 2024, ⟨10.1093/nar/gkae045⟩
Article dans une revue hal-04484170 v1
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Cell-type-specific control of secondary cell wall formation by Musashi-type translational regulators in Arabidopsis

Alicia Kairouani , Dominique Pontier , Claire Picart , Fabien Mounet , Yves Martinez et al.
eLife, 2023, 12, pp.RP88207. ⟨10.7554/eLife.88207⟩
Article dans une revue hal-04230426 v1
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Complementary peptides represent a credible alternative to agrochemicals by activating translation of targeted proteins

Mélanie Ormancey , Bruno Guillotin , Rémy Merret , Laurent Camborde , Carine Duboé et al.
Nature Communications, 2023, 14 (1), pp.254. ⟨10.1038/s41467-023-35951-0⟩
Article dans une revue hal-03949768 v1
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Nicotianamine synthase activity affects nucleolar iron accumulation and impacts rDNA silencing and RNA methylation in Arabidopsis

Charlotte Montacié , Christophe Riondet , Lili Wei , Tommy Darrière , Alizée Weiss et al.
Journal of Experimental Botany, 2023, 74 (15), pp.4384-4400. ⟨10.1093/jxb/erad180⟩
Article dans une revue hal-04097969 v1

Complementary peptides represent a credible alternative to agrochemicals by activating translation of targeted proteins

Mélanie Ormancey , Bruno Guillotin , Rémy Merret , Laurent Camborde , Carine Duboé et al.
Nature Communications, 2023, 14 (1), pp.254. ⟨10.1038/s41467-023-35951-0⟩
Article dans une revue hal-04704308 v1
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Chromatin-associated YTHDC1 coordinates heat-induced reprogramming of gene expression

Kalina Timcheva , Solenne Dufour , Leila Touat-Todeschini , Callum Burnard , Marie-Christine Carpentier et al.
Cell Reports, 2022, 41 (11), pp.111784. ⟨10.1016/j.celrep.2022.111784⟩
Article dans une revue hal-03902782 v1
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Characterization of the complete plastome of <i>Delphinium montanum</i>, a polyploid, endemic and endangered Pyrenean Larkspur

Pascaline Salvado , Christel Llauro , Marie-Christine Carpentier , Valérie Delorme-Hinoux , Joris Bertrand
Mitochondrial DNA Part B Resources, 2022, 7 (4), pp.590 - 592. ⟨10.1080/23802359.2022.2057248⟩
Article dans une revue hal-03672993 v1
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Fast and Efficient 5′P Degradome Library Preparation for Analysis of Co-Translational Decay in Arabidopsis

Marie-Christine Carpentier , Cécile Bousquet-Antonelli , Rémy Merret
Plants, 2021, 10 (3), pp.466. ⟨10.3390/plants10030466⟩
Article dans une revue hal-03209677 v1
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LARP6C orchestrates post-transcriptional reprogramming of gene expression during hydration to promote pollen tube guidance

Elodie Billey , Said Hafidh , Isabel Cruz-Gallardo , Celso G Litholdo , Viviane Jean et al.
The Plant cell, 2021, 33 (8), pp.2637-2661. ⟨10.1093/plcell/koab131⟩
Article dans une revue hal-03275017 v2
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Monitoring of XRN4 targets reveals the importance of co-translational decay during Arabidopsis development

Marie-Christine Carpentier , Jean-Marc Deragon , Viviane Jean , Seng Hour Vichet Be , Cecile Bousquet-Antonelli et al.
Plant Physiology, 2020, pp.00942.2020. ⟨10.1104/pp.20.00942⟩
Article dans une revue hal-02945049 v1
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Construction and characterisation of a knock-down RNA interference line of OsNRPD1 in rice (Oryza sativa ssp japonica cv Nipponbare)

Emilie Debladis , Tzuu-Fen Lee , Yan-Jiun Huang , Jui-Hsien Lu , Sandra M. Mathioni et al.
Philosophical Transactions of the Royal Society B: Biological Sciences, 2020, 375 (1795), pp.20190338. ⟨10.1098/rstb.2019.0338⟩
Article dans une revue hal-04274817 v1
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The impact of transposable elements on the structure, evolution and function of the rice genome

Roland Akakpo , Marie-Christine Carpentier , Yue Ie Hsing , Olivier Panaud
New Phytologist, 2020, ⟨10.1111/nph.16356⟩
Article dans une revue hal-02434127 v1
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The m 6 A pathway protects the transcriptome integrity by restricting RNA chimera formation in plants

Dominique Pontier , Claire Picart , Moaine El Baidouri , François Roudier , Tao Xu et al.
Life Science Alliance, 2019, 2 (3), pp.e201900393. ⟨10.26508/lsa.201900393⟩
Article dans une revue hal-02505328 v1
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Retrotranspositional landscape of Asian rice revealed by 3000 genomes

Marie-Christine Carpentier , Ernandes Manfroi , Fu-Jin Wei , Hshin-Ping Wu , Eric Lasserre et al.
Nature Communications, 2019, 10 (1), ⟨10.1038/s41467-018-07974-5⟩
Article dans une revue hal-02098307 v1
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Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza

Joshua Stein , Yeisoo Yu , Dario Copetti , Derrick Zwickl , Li Zhang et al.
Nature Genetics, 2018, 50 (2), pp.285-296. ⟨10.1038/s41588-018-0040-0⟩
Article dans une revue hal-02098593 v1

Nucleolar Proteome Analysis and Proteasomal Activity Assays Reveal a Link between Nucleolus and 26S Proteasome in A. thaliana

Charlotte Montacié , Nathalie Durut , Alison Opsomer , Denise Palm , Pascale Comella et al.
Frontiers in Plant Science, 2017, 8, ⟨10.3389/fpls.2017.01815⟩
Article dans une revue hal-02115384 v1
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Heat Shock Protein HSP101 Affects the Release of Ribosomal Protein mRNAs for Recovery after Heat Shock.

Rémy Merret , Marie-Christine Carpentier , Jean-Jacques Favory , Claire Picart , Julie Descombin et al.
Plant Physiology, 2017, 174 (2), pp.1216-1225. ⟨10.1104/pp.17.00269⟩
Article dans une revue hal-01594829 v1
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Detection of active transposable elements in Arabidopsis thaliana using Oxford Nanopore Sequencing technology

Emilie Debladis , Christel Llauro , Marie-Christine Carpentier , Marie Mirouze , Olivier Panaud
BMC Genomics, 2017, 18, art. 537 [8 p.]. ⟨10.1186/s12864-017-3753-zg⟩
Article dans une revue ird-01626046 v1
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Sequencing the extrachromosomal circular mobilome reveals retrotransposon activity in plants

Sophie Lanciano , Marie-Christine Carpentier , Christel Llauro , Edouard Jobet , Dagmara Robakowska-Hyzorek et al.
PLoS Genetics, 2017, 13 (2), pp.e1006630. ⟨10.1371/journal.pgen.1006630⟩
Article dans une revue hal-02098598 v1
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Identification of Nucleolus-Associated Chromatin Domains Reveals a Role for the Nucleolus in 3D Organization of the A. thaliana Genome

Frederic Pontvianne , Marie-Christine Carpentier , Nathalie Durut , Veronika Pavlištová , Karin Jaške et al.
Cell Reports, 2016, 16 (6), pp.1574-1587. ⟨10.1016/j.celrep.2016.07.016⟩
Article dans une revue hal-02115369 v1

Heat-induced ribosome pausing triggers mRNA co-translational decay in Arabidopsis thaliana.

Rémy Merret , Vinay K Nagarajan , Marie-Christine Carpentier , Sunhee Park , Jean-Jacques Favory et al.
Nucleic Acids Research, 2015, 43 (8), pp.4121-32
Article dans une revue hal-01180128 v1
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Widespread and frequent horizontal transfers of transposable elements in plants.

Moaine El Baidouri , Marie-Christine Carpentier , Richard Cooke , Dongying Gao , Eric Lasserre et al.
Genome Research, 2014, 24 (5), pp.831-8. ⟨10.1101/gr.164400.113⟩
Article dans une revue hal-01218140 v1
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XRN4 and LARP1 are required for a heat-triggered mRNA decay pathway involved in plant acclimation and survival during thermal stress.

Rémy Merret , Julie Descombin , Yu-Ting Juan , Jean-Jacques Favory , Marie-Christine Carpentier et al.
Cell Reports, 2013, 5 (5), pp.1279-93. ⟨10.1016/j.celrep.2013.11.019⟩
Article dans une revue hal-01217835 v1

Initial symbiont contact orchestrates host-organ-wide transcriptional changes that prime tissue colonization.

Natacha Kremer , Eva E R Philipp , Marie-Christine Carpentier , Caitlin A Brennan , Lars Kraemer et al.
Cell Host and Microbe, 2013, 14 (2), pp.183-94. ⟨10.1016/j.chom.2013.07.006⟩
Article dans une revue hal-00972298 v1

Control of secondary cell wall formation by Musashi-type translational regulators in trees.

Hélène Fouassier , Alicia Kairouani , D. Pontier , C. Picart , Y Martinez et al.
14e Journées du Réseau Français des Parois, Aug 2024, Saint-Malo, France
Communication dans un congrès hal-04848906 v1

Mechanisms and impact of ribosomal RNA methylation in plants

Sara Alina Neumann , Jacinthe Azevedo-Favory , Rémy Merret , Marie-Christine Carpentier , Julien Henry et al.
8ème colloque RNAOcc’ Club RNA Occitanie, Jun 2024, Toulouse, France
Communication dans un congrès hal-04841625 v1

Using long-read nanopore sequencing to unravel structural genomic variations in plants

Marie-Christine Carpentier , Hshin-Ping Wu , Fu-Jin Wei , Christel Llauro , Marie Mirouze et al.
Nanopore London Calling 2019, Oxford Nanopore, May 2019, Londres (UK), United Kingdom
Communication dans un congrès hal-04919461 v1

Unraveling the Retrotranspositional Landscape of Rice at Species Level using 3000 Genomes

Marie-Christine Carpentier , Ernandes Manfroi , Fu-Jin Wei , Hshin-Ping Wu , Eric Lasserre et al.
22nd National Congress on Transposable Elements - MobileET- Bioinformatics Days, Jul 2019, Lyon, France
Communication dans un congrès hal-04919526 v1

Unraveling the Retrotranspositional Landscape of Rice at Species Level using 3000 Genomes

Marie-Christine Carpentier , Ernandes Manfroi , Fu-Jin Wei , Hshin-Ping Wu , Eric Lasserre et al.
Plant and Animal Genomics Conference XXVII, Jan 2019, SAN DIEGO CA, United States
Communication dans un congrès hal-04919501 v1

Sequencing mobilome reveals real time transposable element activity in plants and animals

Marie Mirouze , Sophie Lanciano , Sophie Lanciano , Marie-Christine Carpentier , Christel Llauro et al.
Conference on Epigenetic & Chromatin Regulation of Plant Traits, EpiTRAITS, Jan 2016, Strasbourg, France
Communication dans un congrès hal-04908203 v1

Mobilome sequencing reveals real time transposable element activity in plants

Marie Mirouze , Sophie Lanciano , Marie-Christine Carpentier , Christel Llauro , Alain Ghesquiere
ICTE 2016, GDR Elements transposables, Apr 2016, Saint Malo, France
Communication dans un congrès hal-04908135 v1
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Mechanisms and impact of ribosomal RNA methylation in plants

Sara Alina Neumann , Jacinthe Azevedo-Favory , Rémy Merret , Marie-Christine Carpentier , Julien Henry et al.
The 2024 Post-transcriptional Gene Regulation in Plants meeting, Sep 2024, Banyuls-Sur-Mer, France.
Poster de conférence hal-04841568 v1
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Detection of transcriptomic structural variations in wild rice using Nanopore direct RNA sequencing.

Marie-Christine Carpentier , Christel Llauro , Eric Lasserre , Marie Mirouze , Rod A. Wing et al.
JOBIM 2024: JOURNéES OUVERTES DE BIOLOGIE, INFORMATIQUE ET MATHéMATIQUES 2024, Jun 2024, TOULOUSE Université Paul Sabatier, France
Poster de conférence hal-04919310 v1
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Structural variation involving transposable elements associated with grain width in cultivated rice.

Marie-Christine Carpentier , Christel Llauro , Wan-Yi Qiu , Yue-Ie Hsing , Olivier Panaud
JOBIM 2022: JOURNéES OUVERTES DE BIOLOGIE, INFORMATIQUE ET MATHéMATIQUES 2022, Jul 2022, RENNES, France
Poster de conférence hal-04919402 v1