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Vers une meilleure interprétabilité des réseaux de neurones pour la prédiction du sepsis via des cartes d'attribution variable par variable
Pierre-Elliott Thiboud
,
Valentine Wargnier-Dauchelle
,
Mathieu Lefort
,
Nicolas Duchateau
,
Michaël Sdika
Colloque Français d'Intelligence Artificielle en Imagerie Biomédicale (IABM), Mar 2025, Nice, France
Communication dans un congrès
hal-04971677
v1
|
|
Towards Better Interpretability of Sepsis Prediction by Deep Neural Networks with Variable-wise Attribution Maps
P.-E Thiboud
,
V Wargnier-Dauchelle
,
M Lefort
,
N Duchateau
,
M Sdika
2025 IEEE International Symposium on Biomedical Imaging (ISBI), Apr 2025, Houston (Texas), United States
Communication dans un congrès
hal-04776927
v3
|
|
Dynamic Single-Pixel Imaging on an Extended Field of View without Warping the Patterns
Thomas Maitre
,
Elie Bretin
,
Romain Phan
,
Nicolas Ducros
,
Michaël Sdika
International Conference on Medical Image Computing and Computer Assisted Intervention, Oct 2024, Marrakech, Morocco. pp 275-284, ⟨10.1007/978-3-031-72104-5_27⟩
Communication dans un congrès
hal-04533981
v2
|
|
Hybrid single-pixel camera for dynamic hyperspectral imaging
Thomas Maitre
,
Elie Bretin
,
Laurent Mahieu-Williame
,
Michaël Sdika
,
Nicolas Ducros
Communication dans un congrès
hal-04310110
v2
|
|
Application on Clinical Data of Robust Estimation of PpIX in Multispectral Excited Fluorescence Spectroscopy
Arthur Gautheron
,
Michaël Sdika
,
J. Guyotat
,
antoine uzel
,
David Meyronet
et al.
RITS 2024, Jun 2024, Clermond - Ferrand, France
Communication dans un congrès
hal-04617157
v1
|
|
Near infrared diffuse reflectance spectroscopy for fat quantification in fatty liver disease
Antoine Uzel
,
Michaël Sdika
,
Sophie Chopinet
,
Olivier Lopez
,
Bruno Montcel
Advanced Biomedical and Clinical Diagnostic and Surgical Guidance Systems XXII, Jan 2024, San-Francisco, United States. pp.29, ⟨10.1117/12.3001895⟩
Communication dans un congrès
hal-04628102
v1
|
|
Near infrared diffuse reflectance spectroscopy quantification in fatty liver disease
Antoine Uzel
,
Olivier Lopez
,
Sophie Chopinet
,
Michaël Sdika
,
Bruno Montcel
Communication dans un congrès
hal-04628154
v1
|
|
The Impact of Hardware Variability on Applications Packaged with Docker and Guix: a Case Study in Neuroimaging
Gaël Vila
,
Emmanuel Medernach
,
Inés Gonzalez
,
Axel Bonnet
,
Yohan Chatelain
et al.
Communication dans un congrès
hal-04480308
v2
|
|
An unexpected confounder: how brain shape can be used to classify MRI scans ?
Valentine Wargnier-Dauchelle
,
Thomas Grenier
,
Michaël Sdika
Medical Imaging with Deep Learning, Jul 2024, Paris, France
Communication dans un congrès
hal-04561863
v1
|
|
Evaluation of liver viability for transplantation by fluorescence spectroscopy
Antoine Uzel
,
Olivier Lopez
,
Arthur Gautheron
,
Guillaume Rossignol
,
Xavier Muller
et al.
Communication dans un congrès
hal-04617068
v1
|
|
Pixel-wise and real-time estimation of optical mean path length using deep learning: application for intraoperative functional brain mapping
Charly Caredda
,
Ivan Ezhov
,
Michaël Sdika
,
Frédéric Lange
,
Luca Giannoni
et al.
Communication dans un congrès
hal-04661800
v1
|
|
Robust estimation of 5-ALA-induced PpIX contributions in multiple-wavelength excitation fluorescence spectroscopy to improve intraoperative glioma detection: application on clinical data
Arthur Gautheron
,
Michaël Sdika
,
Jacques Guyotat
,
Antoine Uzel
,
David Meyronet
et al.
Communication dans un congrès
hal-04617079
v1
|
|
Quantification de graisse pour la stéatose hépatique par spectroscopie proche infrarouge en réflectance diffuse
A Uzel
,
Olivier Lopez
,
S Chopinet
,
M Sdika
,
B Montcel
Recherche en Imagerie et Technologies pour la Santé 2024, Jun 2024, Aubière, France
Communication dans un congrès
hal-04628297
v1
|
|
Constrained non-negative networks for a more explainable and interpretable classification
Valentine Wargnier-Dauchelle
,
Thomas Grenier
,
Françoise Durand-Dubief
,
François Cotton
,
Michaël Sdika
Medical Imaging with Deep Learning, Jul 2024, Paris, France
Communication dans un congrès
hal-04561860
v1
|
|
HyperProbe consortium: innovate tumour neurosurgery with innovative photonic solutions
Charly Caredda
,
Luca Giannoni
,
Frédéric Lange
,
Ivan Ezhov
,
Adithep Kawinkij
et al.
SFNR 2024, Société Française de Neuroradiologie, Mar 2024, Paris, France
Communication dans un congrès
hal-04959009
v1
|
|
Separable spectral unmixing based on the learning of periodic absorbance changes: application to functional brain mapping using RGB imaging
C. Caredda
,
Jérémy Cohen
,
Laurent Mahieu-Williame
,
Raphaël Sablong
,
Michaël Sdika
et al.
European Conferences on Biomedical Optics, 2023, Munich, Germany, SPIE, Jun 2023, Munchen, Germany. pp.44, ⟨10.1117/12.2670506⟩
Communication dans un congrès
hal-04181635
v1
|
|
Robust Unsupervised Image to Template Registration Without Image Similarity Loss
Slim Hachicha
,
Célia Le
,
Valentine Wargnier-Dauchelle
,
Michaël Sdika
Medical Image Learning with Limited and Noisy Data, Second International Workshop, MILLanD 2023, Held in Conjunction with MICCAI 2023, Vancouver, Proceedings, Oct 2023, Vancouver, Canada
Communication dans un congrès
hal-04183379
v1
|
|
Near infrared diffuse reflectance spectroscopy for fat quantification in non-alcoholic fatty liver disease
Antoine Uzel
,
Michaël Sdika
,
Sophie Chopinet
,
Olivier Lopez
,
Bruno Montcel
Communication dans un congrès
hal-04279251
v1
|
|
Reproducibility of Tumor Segmentation Outcomes with a Deep Learning Model
Morgane Des Ligneris
,
Axel Bonnet
,
Yohan Chatelain
,
Tristan Glatard
,
Michaël Sdika
et al.
Communication dans un congrès
hal-04006057
v1
|
|
Comparison of intraoperative functional brain maps obtained with RGB imaging with preoperative functional magnetic resonance Imaging maps: a task-based and resting-state study
Charly Caredda
,
Anne Josset
,
Eric van Reeth van Reeth
,
Laurent Mahieu-Williame
,
Raphaël Sablong
et al.
Communication dans un congrès
hal-03687220
v1
|
|
Intraoperative optical imaging for neurosurgery guidance
Charly Caredda
,
Laure Alston
,
Arthur Gautheron
,
L. Mahieu-Williame
,
Bruno Montcel
et al.
Journées de la Recherche en Imagerie et Technologies pour la Santé (RITS ) 2022, May 2022, Brest, France
Communication dans un congrès
hal-03700652
v1
|
|
Design of brain simulating liquid and numeric phantoms for evaluating hemodynamic changes in intraoperative functional brain mapping studies
Charly Caredda
,
Laurent Mahieu-Williame
,
Raphaël Sablong
,
Michaël Sdika
,
Jacques Guyotat
et al.
Communication dans un congrès
hal-03687207
v1
|
|
Robust Estimation of 5-ALA Induced PpIX Multiple-Wavelength Excitation Fluorescence Spectroscopy for Improving Glioma Classification
Arthur Gautheron
,
Michaël Sdika
,
Mathieu Hébert
,
Bruno Montcel
SPIE Photonics Europe, Clinical Biophotonics II ; SPIE proceedings, Apr 2022, Strasbourg, France. pp.1214607, ⟨10.1117/12.2620945⟩
Communication dans un congrès
hal-03665499
v1
|
|
Estimation of Fluorescence Contributions using Multiple-Wavelength Excitation: the example of PpIX for improving Glioma Classification
Arthur Gautheron
,
Michael Sdika
,
Mathieu Hébert
,
Bruno Montcel
Journées Imagerie Optique Non Conventionnelle (JIONC), Mar 2022, Paris, France
Communication dans un congrès
hal-03597733
v1
|
|
Un Classifieur plus Interprétable pour la SEP
Valentine Wargnier-Dauchelle
,
Thomas Grenier
,
Françoise Durand-Dubief
,
François Cotton
,
Michaël Sdika
Congrès Société Française de Résonance Magnétique en Biologie et Médecine (SFRMBM), Sep 2021, Lyon, France
Communication dans un congrès
hal-03212961
v1
|
|
Intraoperative Statistical Parametric Brain Mapping using RGB Imaging
Charly Caredda
,
Laurent Mahieu-Williame
,
Raphaël Sablong
,
Michaël Sdika
,
Jacques Guyotat
et al.
European Conferences on Biomedical Optics, Jun 2021, Munchen, Germany
Communication dans un congrès
hal-03261989
v1
|
|
Application of Deep Leaning Model for Quality Control of Short-echo 7T MRSI with Various Disease Types
Huawei Liu
,
Emilie Xie
,
H. Ratiney
,
Michaël Sdika
,
Yan Li
2021 ISMRM & SMRT Annual Meeting, May 2021, virtual Vancouver, Canada
Communication dans un congrès
hal-03519714
v1
|
|
Intraoperative Resting State Functional Connectivity Based on RGB Imaging
Charly Caredda
,
Laurent Mahieu-Williame
,
Raphaël Sablong
,
Michaël Sdika
,
Fabien C Schneider
et al.
European Conferences on Biomedical Optics, Jun 2021, Munchen (virtual), Germany
Communication dans un congrès
hal-03262003
v1
|
|
Optimal Spectral Combination of a Hyperspectral Camera for Intraoperative Hemodynamic and Metabolic Brain Mapping
Charly Caredda
,
Laurent Mahieu-Williame
,
Raphaël Sablong
,
Michaël Sdika
,
Jacques Guyotat
et al.
European Conferences on Biomedical Optics, Jun 2021, Munchen (virtual), Germany
Communication dans un congrès
hal-03262012
v1
|
|
A More Interpretable Classifier for Multiple Sclerosis
Valentine Wargnier-Dauchelle
,
Thomas Grenier
,
Françoise Durand-Dubief
,
François Cotton
,
Michaël Sdika
Communication dans un congrès
hal-03212945
v1
|
|
Intraoperative functional and metabolic brain mapping using hyperspectral imaging
Charly Caredda
,
Laurent Mahieu-Williame
,
Raphaël Sablong
,
Michaël Sdika
,
Jacques Guyotat
et al.
Communication dans un congrès
hal-02539551
v1
|
|
MRI-based radiomic to predict lipomatous soft tissue tumors malignancy
Benjamin Leporq
,
Amine Bouhamama
,
Fabrice Lame
,
Catherine Bihane
,
Michaël Sdika
et al.
27th Annual meeting of the ISMRM, May 2019, Montréal, Canada
Communication dans un congrès
hal-02266792
v1
|
|
Pixel-wise modied Beer-Lambert model for intraoperative functional brain mapping
Charly Caredda
,
Laurent Mahieu-Williame
,
Raphaël Sablong
,
Michaël Sdika
,
Bruno Montcel
European Conferences on Biomedical Optics, Jun 2019, Munich, Germany
Communication dans un congrès
hal-02142540
v1
|
|
MR SPECTROSCOPY ARTIFACT REMOVAL WITH U-NET CONVOLUTIONAL NEURAL NETWORK
Nima Hatami
,
Hélène Ratiney
,
Michaël Sdika
27th Annual meeting of the ISMRM, May 2019, Montreal, Canada
Communication dans un congrès
hal-02129946
v1
|
|
Real time intraoperative functional brain mapping using a RGB camera
Charly Caredda
,
Laurent Mahieu-Williame
,
Raphaël Sablong
,
Michaël Sdika
,
Jacques Guyotat
et al.
European Conferences on Biomedical Optics, Jun 2019, Munich, Germany
Communication dans un congrès
hal-02142519
v1
|
|
Segmentation of neonates cerebral ventricles with 2D CNN in 3D US data: suitable training-set size and data augmentation strategies
Matthieu Martin
,
Bruno Sciolla
,
Michaël Sdika
,
Philippe Quetin
,
Philippe Delachartre
Communication dans un congrès
hal-03148378
v1
|
|
Neuroimagerie fonctionnelle multispectrale
C. Caredda
,
L. Mahieu-Williame
,
R Sablong
,
Michaël Sdika
,
L.M. Alston
et al.
OPTDIAG, 2018, Paris, Unknown Region
Communication dans un congrès
hal-01902495
v1
|
|
Towards handling artefacts in Convolutional Neural Networks-based MRS quantification
Nima Hatami
,
Michaël Sdika
,
Hélène Ratiney
ISMRM MRS Workshop, Oct 2018, Utrecht, Netherlands
Communication dans un congrès
hal-01904680
v1
|
|
Magnetic Resonance Spectroscopy Quantification using Deep Learning
Nima Hatami
,
Michaël Sdika
,
Hélène Ratiney
MICCAI, Oct 2018, Grenada, Spain
Communication dans un congrès
hal-01904617
v1
|
|
Towards Integrating Spatial Localization in Convolutional Neural Networks for Brain Image Segmentation
Pierre-Antoine Ganaye
,
Michael Sdika
,
Hugues Benoit-Cattin
2018 IEEE 15th International Symposium on Biomedical Imaging (ISBI 2018), Apr 2018, Washington, United States. ⟨10.1109/ISBI.2018.8363652⟩
Communication dans un congrès
hal-01812045
v1
|
|
MRI-based radiomic to assess lipomatous soft tissue tumors malignancy: a pilot study
Benjamin Leporq
,
Amine Bouhamama
,
Fabrice Lame
,
Catherine Bihane
,
Michael Sdika
et al.
International Society of Magnetic Resonance in Medicine and European Society of Magnetic Resonance in Medicine and Biology joint Annual Meeting, Jun 2018, Paris, France
Communication dans un congrès
hal-01921659
v1
|
|
Semi-supervised learning for segmentation under semantic constraint
Pierre-Antoine Ganaye
,
Michaël Sdika
,
Hugues Benoit-Cattin
MICCAI, Sep 2018, Grenada, Spain
Communication dans un congrès
hal-01904641
v1
|
|
Automatic Segmentation of the Cerebral Ventricle in Neonates Using Deep Learning with 3D Reconstructed Freehand Ultrasound Imaging
Matthieu Martin
,
Bruno Sciolla
,
Michaël Sdika
,
Xiaoyu Wang
,
Philippe Quétin
et al.
Communication dans un congrès
hal-02043054
v1
|
|
3D MRI Segmentation of muscle through 2D multi-label propagation at 7T
Augustin C. Ogier
,
Alexandre Fouré
,
Michaël Sdika
,
Arnaud Le Troter
,
Bendahan David
34th Annual Scientific Meeting of the European Society of Magnetic Resonance in Medicine and Biology, European Society of Magnetic Resonance in Medicine and Biology, Oct 2017, Barcelone, Spain
Communication dans un congrès
hal-04077604
v1
|
|
OptiC: Robust and Automatic Spinal Cord Localization on a Large Variety of MRI Data Using a Distance Transform Based Global Optimization
Charley Gros
,
Benjamin de Leener
,
Sara Dupont
,
Allan R. Martin
,
Michael G. Fehlings
et al.
Communication dans un congrès
hal-01713965
v1
|
|
Automatic Detection of the Spinal Cord Centerline using Machine Learning and Global Nonlinear Optimization
Michaël Sdika
,
V. Callot
Recherche en Imagerie et Technologies pour la Santé - RITS 2017, Mar 2017, Lyon, France
Communication dans un congrès
hal-01721389
v1
|
|
Robust real time motion compensation for intraoperative video processing during neurosurgery
Michaël Sdika
,
Laure Alston
,
Laurent Mahieu-Williame
,
Jacques Guyotat
,
David Rousseau
et al.
Communication dans un congrès
hal-01451713
v1
|
|
Improving the spatial resolution and SNR of rat brain T2-weighted MR images: application of a super-resolution method
E. van Reeth van Reeth
,
Michaël Sdika
,
S. Gaillard
,
P.-H. Luppi
,
P.-A. Libourel
et al.
ISMRM 23rd Annual Meeting & Exhibition, May 2015, Toronto, Canada
Communication dans un congrès
hal-01288505
v1
|
|
Multiple labels point-set registration
E. van Reeth van Reeth
,
M Sdika
,
P.-H. Luppi
,
P.-A. Libourel
,
O. Beuf
2015 IEEE 12th International Symposium on Biomedical Imaging (ISBI), Apr 2015, New-York, United States. pp.609 - 612, ⟨10.1109/ISBI.2015.7163947⟩
Communication dans un congrès
hal-01272177
v1
|
|
Amélioration de résolution spatiale et SNR d’images cérébrales pondérées T2 de rat : application de la super-résolution
Eric van Reeth van Reeth
,
Michaël Sdika
,
Sophie Gaillard
,
Pierre-Hervé Luppi
,
Paul-Antoine Libourel
et al.
2ème Congrès de la SFRMBM, Mar 2015, Grenoble, France
Communication dans un congrès
hal-01288527
v1
|
|
MNI-Poly-AMU Average Anatomical Template for Automatic Spinal Cord Measurements
V.S. Fonov
,
A. Le Troter
,
M. Taso
,
Gaëtan Lévêque
,
M. Benhamou
et al.
ISMRM-ESMRMB Annual Meeting 2014, May 2014, Milan, Italy
Communication dans un congrès
hal-01117634
v1
|
|
Atlas of White-Matter Tracts in the Human Spinal Cord
M. Benhamou
,
V.S. Fonov
,
M. Taso
,
A. Le Troter
,
Michaël Sdika
et al.
ISMRM-ESMRMB Annual Meeting 2014, May 2014, Milan, Italy
Communication dans un congrès
hal-01117699
v1
|
|
Validation of a 2D Spinal Cord Probabilistic Atlas. Application to FA Measurement and VBM Study of the GM Atrophy Occurring with Age
M. Taso
,
A. Le Troter
,
Michaël Sdika
,
V.S. Fonov
,
J. Cohen-Adad
et al.
ISMRM-ESMRMB Annual Meeting 2014, May 2014, Milan, France
Communication dans un congrès
hal-01117689
v1
|
|
Démonstrateur en imagerie à vocation diagnostique dans le cadre de l'AVC
C. Frindel
,
H. Rositi
,
Michaël Sdika
,
F. Chauveau
,
T.-H. Cho
et al.
4èmes Journées Démonstrateurs 2013, Jun 2013, Angers, France
Communication dans un congrès
hal-00849981
v1
|
|
Liver perfusion quantification with MR-DCE imaging at 3.0 T for liver fibrosis assessment in patients with chronic liver diseases
Benjamin Leporq
,
Franck Pilleul
,
Jérôme Dumortier
,
Olivier Guillaud
,
Thibaud Lefort
et al.
ISMRM 21st Annual Meeting & Exhibition, Apr 2013, Salt-Lake City, United States. pp.3911
Communication dans un congrès
hal-01128036
v1
|
|
Optimal Recombination of Multi-Coils CSI Data using Image Based Sensitivity Map
Michaël Sdika
,
Y. Le Fur
,
P. . Cozzone
20th Annual meeting of the ISMRM, 2011, Montreal, Canada. pp.3478
Communication dans un congrès
hal-01902502
v1
|
|
Towards a biochemical and structure specific quantitative analysis of the mouse brain using Magnetic Resonance Spectroscopic Imaging at 11.7T
H. Ratiney
,
Michaël Sdika
,
O. Beuf
,
Y. Le Fur
,
S. Cavassila
Journées Thématiques GDR "Imagerie in vivo" (IMAGIV), 2011, Paris, Unknown Region
Communication dans un congrès
hal-01879479
v1
|
|
Vascular Alterations and Recruitment in Spinal Cord Injury Revealed by Multislice Arterial Spin Labeling (ASL) Perfusion Imaging
Guillaume Duhamel
,
Tanguy Marqueste
,
Michaël Sdika
,
M. Tachrount
,
P. Decherchi
et al.
ISMRM-ESMRMB Joint Annual Meeting, 2011, Stockholm, Sweden. pp.5092
Communication dans un congrès
hal-01902500
v1
|
|
Multi Atlas Segmentation of Rat Leg Muscles
Michaël Sdika
,
A. Tonson
,
P. . Cozzone
,
D. Bendahan
20th Annual meeting of the ISMRM, 2011, Montreal, Canada. pp.2562
Communication dans un congrès
hal-01902503
v1
|
|
A Fully Automated White Matter/Gray Matter Segmentation of Mice Spinal Cord on DTI Images
Michaël Sdika
,
V. Callot
,
M Hebert
,
Guillaume Duhamel
,
P.J. Cozzone
ISMRM-ESMRMB Joint Annual Meeting, 2010, Stockholm, Sweden. pp.442
Communication dans un congrès
hal-01902505
v1
|
|
Short Echo Time H1 Chemical Shift Imaging data quantification in the mouse brain at 11.7T using a constrained parametric macromolecular model
H. Ratiney
,
Y. Le Fur
,
Michaël Sdika
,
S. Cavassila
ISMRM-ESMRMB Joint Annual Meeting, 2010, Stockholm, Sweden
Communication dans un congrès
hal-01879492
v1
|
|
Segmentation of the Structure of the Mouse Spinal Cord on DTI images
Michaël Sdika
,
V. Callot
,
M Hebert
,
Guillaume Duhamel
,
P.J. Cozzone
ISMRM-ESMRMB Joint Annual Meeting, 2010, Stockholm, Sweden. pp.5115
Communication dans un congrès
hal-01902504
v1
|
|
Towards structure specific macromolecular content of mouse brain from Chemical Shift Imaging data at 11.7T
H. Ratiney
,
Michaël Sdika
,
O. Beuf
,
Y. Le Fur
,
S. Cavassila
ISMRM, 2009, Hawai, United States. pp.3293
Communication dans un congrès
hal-01879496
v1
|
|
Quantitative assessment of the brain macromolecular content in a mouse model of neuro-inflammation from chemical shift imaging data at 11.7T
H. Ratiney
,
Y. Le Fur
,
Michaël Sdika
,
M. Touret
,
A. Bernard
et al.
ESMRMB, 2009, Antalya, Turkey. pp.39
Communication dans un congrès
hal-01879500
v1
|
|
Effective Voigt model estimation using multiple random starting values and parameter bounds settings for in vivo hepatic 1H Magnetic Resonance Spectroscopy data
H. Ratiney
,
A. Bucur
,
Michaël Sdika
,
O. Beuf
,
F. Pilleul
et al.
Communication dans un congrès
hal-01879508
v1
|
|
Regional Estimation of T1 Metabolite Relaxation using 2D MRSI and a Bootstrap Approach at 1.5T
H. Ratiney
,
S.M. Noworolski
,
Michaël Sdika
,
R. Srinivasan
,
R.G. Henry
et al.
Int. Soc. Magnetic Resonance in Medicine, 14th Scientific Meeting and Exhibition, 2006, Seattle, Washington, USA, Unknown Region
Communication dans un congrès
hal-01879435
v1
|
|
Semi-Parametric estimation in In vivo MR Spectroscopy
H. Ratiney
,
E. Capobianco
,
Michaël Sdika
,
H. Rabeson
,
C. Cudalbu
et al.
ProRISC, IEEE Benelux, 2005, Veldhoven, The, Netherlands. pp.658-667
Communication dans un congrès
hal-01879442
v1
|
|
PhotoMole: retrieval from a database of natural images
Matthijs Douze
,
Michaël Sdika
,
Cordelia Schmid
CVPR'05 - IEEE Computer Society Conference on Computer Vision and Pattern Recognition, Jun 2005, San Diego, United States. pp.1-4
Communication dans un congrès
hal-01902510
v1
|