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Mathieu Bonneau

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Analysis of image-based sow activity patterns reveals several associations with piglet survival and early growth

Océane Girardie , Mathieu Bonneau , Yvon Billon , Jean Bailly , Ingrid David et al.
Frontiers in Veterinary Science, 2023, 9, ⟨10.3389/fvets.2022.1051284⟩
Journal articles hal-03934529v1

Assessing Goats' Fecal Avoidance Using Image Analysis-Based Monitoring

Mathieu Bonneau , Xavier Godard , Jean-Christophe Bambou
Frontiers in Animal Science, 2022, 3, ⟨10.3389/fanim.2022.835516⟩
Journal articles hal-03752961v1
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Predicting sow postures from video images: Comparison of convolutional neural networks and segmentation combined with support vector machines under various training and testing setups

Mathieu Bonneau , Bernard Benet , Yann Labrune , Jean Bailly , Edmond Ricard et al.
Biosystems Engineering, 2021, 212, pp.19-29. ⟨10.1016/j.biosystemseng.2021.09.014⟩
Journal articles hal-03413048v1

A Non-Invasive Millimetre-Wave Radar Sensor for Automated Behavioural Tracking in Precision Farming—Application to Sheep Husbandry

Alexandre Dore , Cristian Pasquaretta , Dominique Henry , Edmond Ricard , Jean-François Bompa et al.
Sensors, 2021, 21 (23), pp.8140. ⟨10.3390/s21238140⟩
Journal articles hal-03485290v1

Behavior Comparison During Chronic Heat Stress in Large White and Creole Pigs Using Image-Analysis

Mathieu Bonneau , Nausicaa Poullet , David Beramice , Laurent Dantec , Laurianne L. Canario et al.
Frontiers in Animal Science, 2021, 2, ⟨10.3389/fanim.2021.784376⟩
Journal articles hal-03475225v1
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Outdoor animal tracking combining neural network and time-lapse cameras

Mathieu Bonneau , Jehan-Antoine Vayssade , Willy Troupé , Rémy Arquet
Computers and Electronics in Agriculture, 2020, 168, pp.105150. ⟨10.1016/j.compag.2019.105150⟩
Journal articles hal-02624666v1

Category count models for adaptive management of metapopulations: Case study of an imperiled salamander

Katherine M. O'Donnell , Paul L. Fackler , Fred A. Johnson , Mathieu Bonneau , Julien Martin et al.
Conservation Science and Practice, 2020, 13 p. ⟨10.1111/csp2.180⟩
Journal articles hal-02628289v1

Mixed grazing of adult goats and cattle: Lessons from long-term monitoring

Maurice Mahieu , Rémy Arquet , Jérôme Fleury , Mathieu Bonneau , Nathalie Mandonnet et al.
Veterinary Parasitology, 2020, 280, pp.109087. ⟨10.1016/j.vetpar.2020.109087⟩
Journal articles hal-03198474v1

Optimal spatial allocation of control effort to manage invasives in the face of imperfect detection and misclassification

Mathieu Bonneau , Julien Martin , Nathalie Peyrard , Leroy Rodgers , Christina M. Romagosa et al.
Ecological Modelling, 2019, 392, pp.108-116. ⟨10.1016/j.ecolmodel.2018.11.012⟩
Journal articles hal-02626872v1

Automatic activity tracking of goats using drone camera

Jehan-Antoine Vayssade , Rémy Arquet , Mathieu Bonneau
Computers and Electronics in Agriculture, 2019, 162, pp.767-772. ⟨10.1016/j.compag.2019.05.021⟩
Journal articles hal-02622276v1

Integrating encounter theory with decision analysis to evaluate collision risk and determine optimal protection zones for wildlife

Bradley J. Udell , Julien Martin , Robert J. Fletcher , Mathieu Bonneau , Holly H. Edwards et al.
Journal of Applied Ecology, 2019, 56 (5), pp.1050-1062. ⟨10.1111/1365-2664.13290⟩
Journal articles hal-02619852v1

Automatic activity tracking of goats using drone camera

Jehan-Antoine Vayssade , Rémy Arquet , Mathieu Bonneau
Computers and Electronics in Agriculture, 2019, 162, pp.767-772. ⟨10.1016/j.compag.2019.05.021⟩
Journal articles hal-03753650v1
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Dynamic minimum set problem for reserve design: Heuristic solutions for large problems

Mathieu Bonneau , Régis Sabbadin , Fred A. Johnson , Bradley Stith
PLoS ONE, 2018, 13 (3), ⟨10.1371/journal.pone.0193093⟩
Journal articles hal-02626203v1
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Goats worm burden variability also results from non-homogeneous larval intake

Mathieu Bonneau , Jean-Christophe Bambou , Nathalie Mandonnet , Rémy Arquet , Maurice Mahieu et al.
Scientific Reports, 2018, 8 (1), pp.15987. ⟨10.1038/s41598-018-34338-2⟩
Journal articles hal-02627776v1

Optimal schedule for monitoring a plant incursion when detection and treatment success vary over time

Mathieu Bonneau , Cindy E. Hauser , Nicholas S. G. Williams , Roger D. Cousens
Biological Invasions, 2018, pp.741-756. ⟨10.1007/s10530-017-1572-4⟩
Journal articles hal-02620925v1
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Optimal control of an invasive species using a reaction-diffusion model and linear programming

Mathieu Bonneau , Fred Johnson A. , Brian J. Smith , Christina M. Romagosa , Julien Martin et al.
Ecosphere, 2017, 8 (10), pp.Non Paginé. ⟨10.1002/ecs2.1979⟩
Journal articles hal-02627999v1
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Expert Elicitation, Uncertainty, and the Value of Information in Controlling Invasive Species

Fred A. Johnson , Brian J. Smith , Mathieu Bonneau , Julien Martin , Christina Romagosa et al.
Ecological Economics, 2017, 137, pp.83-90. ⟨10.1016/j.ecolecon.2017.03.004⟩
Journal articles hal-01514233v1
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Urbanization may limit impacts of an invasive predator on native mammal diversity

Brian E. Reichert , Adia R. Sovie , Brad J. Udell , Kristen M. Hart , Rena R. Borkhataria et al.
Diversity and Distributions, 2017, 23 (4), pp.355-367. ⟨10.1111/ddi.12531⟩
Journal articles hal-01603392v1

Sampling for weed spatial distribution mapping need not be adaptive

Mathieu Bonneau , Nathalie Dubois Peyrard Peyrard , Sabrina S. Gaba , Régis Sabbadin
Environmental and Ecological Statistics, 2016, 23 (2), pp.233 - 255. ⟨10.1007/s10651-015-0337-4⟩
Journal articles hal-02640008v1

Spatially explicit control of invasive species using a reaction–diffusion model

Mathieu Bonneau , Fred A. Johnson , Christina M Romagosa
Ecological Modelling, 2016, 337, pp.15-24. ⟨10.1016/j.ecolmodel.2016.05.013⟩
Journal articles hal-01603393v1

Reinforcement learning-based design of sampling policies under cost constraints in Markov random fields: application to weed map reconstruction

Mathieu Bonneau , Sabrina S. Gaba , Nathalie Dubois Peyrard Peyrard , Régis Sabbadin
Computational Statistics and Data Analysis, 2014, 72, pp.30-44. ⟨10.1016/j.csda.2013.10.002⟩
Journal articles hal-02633760v1

Décision dans les agro-écosystèmes

Gauthier Quesnel , Mahuna Akplogan , Mathieu Bonneau , Roger Martin-Clouaire , Nathalie Dubois Peyrard Peyrard et al.
Revue des Sciences et Technologies de l'Information - Série RIA : Revue d'Intelligence Artificielle, 2013, 27 (4-5), pp.409-442. ⟨10.3166/ria.27.409-442⟩
Journal articles hal-02650505v1
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Que nous disent les réseaux d'observatoires sur les réactions de la flore adventice aux évolutions des pratiques agricoles ?

Xavier X. Reboud , Sabrina Gaba , Benjamin Borgy , Mathieu Bonneau , M. Délos et al.
Innovations Agronomiques, 2013, 28, pp.127-140
Journal articles hal-01190467v1

Clustering of Meishan and Large White sows for activity defined from image analysis, and influence on piglet mortality

Oceane Girardie , Mathieu Bonneau Bonneau , Yvon Billon , Jean Bailly , Ingrid David et al.
WCGALP, Jul 2022, rotterdam, Netherlands
Conference papers hal-03725121v1
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Analyse d'images pour le suivi d'animaux d'élevage

Mathieu Bonneau , Laurianne L. Canario , Yann Labrune , Edmond Ricard , Bernard Benet et al.
GDR ISIS - Intelligence artificielle/Apprentissage machine pour l'agriculture, Centre national de la recherche scientifique, Nov 2020, Inconnu, France
Conference papers hal-03023955v1
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Utilisation de techniques d’intelligence artificielle pour des opérations de détection et d’identification dans le domaine animalier

Bernard Benet , Anders Mårell , Yves Boscardin , Mathieu Bonneau , Laurianne L. Canario et al.
Journée GDR Isis, Centre national de la recherche scientifique, Nov 2020, Inconnu, France
Conference papers hal-03079459v1

Méthodes d'estimation de l'ingestion individuelle d'animaux élevés en groupe

Remy Delagarde , Mathieu Bonneau , Maryline Boval , Herve Chapuis , Géraldine Fleurance et al.
Défis scientifiques Phase, Nov 2019, Rennes, France
Conference papers hal-02735680v1

Development and validation of an embedded tool to measure postural activity of lactating sows

Laurianne L. Canario , Yann Labrune , Jean-François Bompa , Yvon Billon , Laure Ravon et al.
70. Annual Meeting of the European Association for Animal Production (EAAP), Aug 2019, Ghent, Belgium. 717 p
Conference papers hal-02737266v1

Goats monitoring at the pasture scale combining neural network and time-lapse cameras

Mathieu Bonneau , Jehan-Antoine Vayssade , Willy Troupé , Rémy Arquet
European Conference on Precisions Livestock Farming (ECPLF), Aug 2019, Cork, Ireland
Conference papers hal-02737985v1

Répartition du risque d'infestation au sein d'un troupeau de petits-ruminants au pâturage tournant

Mathieu Bonneau , Rémy Arquet , Maurice Mahieu
Journée du réseau ModStatSAP, Mar 2018, Paris, France
Conference papers hal-02790210v1

Control of nematodes at different life stages, which stage should we target?

Mathieu Bonneau , Jean-Christophe Bambou , Maurice Mahieu , Rémy Arquet , Harry Archimède et al.
Modelling in Animal Health conference - ModAH 2017, Modelling in Animal Health (ModAH). Nantes, FRA., Jun 2017, Nantes, France
Conference papers hal-01605407v1

A hidden Markov random field approach for control prioritization based on noisy observations

Mathieu Bonneau , Julien Martin , Christina Romagosa , Fred Johnson A.
101 st ESA Annual Meeting Ecological Society of America, Aug 2016, Fort Lauderdale, Floride, United States
Conference papers hal-01608448v1

Designing a protected area in Florida's Everglades Headwaters region with encroaching urbanization

Stephanie S. Romañach , Bradley Stith , Mathieu Bonneau , Fred A. Johnson
101 st ESA Annual Meeting Ecological Society of America, Ecological Society of America (ESA). USA., Aug 2016, Fort Lauderdale, Floride, United States
Conference papers hal-01603391v1

Using structured decision making and category count models to develop optimal policies for imperiled salamander habitat restoration

Katie O'Donnell , Fred Johnson A. , Mathieu Bonneau , Julien Martin , Paul Fackler et al.
101 st ESA Annual Meeting Ecological Society of America, Aug 2016, Fort Lauderdale, Floride, United States
Conference papers hal-01606263v1

Designing the Everglades headwaters national wildlife refuge for habitat needs considering urbanization encroachment

Stéphanie Romañach , Brad Stith , Mathieu Bonneau , Fred Johnson A.
National Conference on Ecosystem Restoration, University of Florida [Gainesville] (UF). USA., Apr 2016, Coral Springs, Floride, United States
Conference papers hal-01607455v1

Decision analysis for optimal control of invasive species in the Everglades

Fred A. Johnson , Mathieu Bonneau , Julien Martin , Christina M Romagosa , Paul Fackler et al.
101 st ESA Annual Meeting Ecological Society of America, Ecological Society of America (ESA). Gainesville, Floride, USA., Aug 2016, Fort Lauderdale, Floride, United States
Conference papers hal-01607005v1

Integrating lethal collision risk from watercraft into optimal designs zones for marine mammals

Brad J. Udell , Julien Martin , Robert Fletcher , Mathieu Bonneau , Edwards Holly et al.
101 st ESA Annual Meeting Ecological Society of America, Aug 2016, Fort Lauderdale (Floride), United States
Conference papers hal-01603390v1

Decision in agroecosystems advanced modelling techniques studying global changes in environmental sciences

Gauthier Quesnel , Mahuna Akplogan , Mathieu Bonneau , Roger Martin-Clouaire , Nathalie Dubois Peyrard Peyrard et al.
19th Global Biennial Conference of the, Oct 2013, Toulouse, France. pp.29, ⟨10.1016/B978-0-444-63536-5.00010-7⟩
Conference papers hal-02740144v1
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Reinforcement-learning for sampling design in Markov random fields

Mathieu Bonneau , Nathalie Dubois Peyrard , Régis Sabbadin
International Conference on Computational Statistics, Aug 2012, Limassol, Cyprus. pp.12
Conference papers hal-01191361v1
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A reinforcement-learning algorithm for sampling design in Markov random fields

Mathieu Bonneau , Nathalie Dubois Peyrard Peyrard , Régis Sabbadin
20. European Conference on Artificial Intelligence, Aug 2012, Montpellier, France. pp.1056, ⟨10.3233/978-1-61499-098-7-181⟩
Conference papers hal-02748492v1
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Weeds sampling for map reconstruction: a Markov random field approach

Mathieu Bonneau Bonneau , Sabrina S. Gaba , Nathalie Dubois Peyrard Peyrard , Régis Sabbadin
Workshop on Spatial Statistics and Image Analysis in Biology, May 2012, Avignon, France. pp.4
Conference papers hal-00988416v1
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Echantillonnage adaptatif optimal dans les champs de Markov discrets

Mathieu Bonneau , Nathalie Dubois Peyrard Peyrard , Régis Sabbadin
JFPDA 2011 - Sixièmes journées francophones de planification, décision et apprentissage pour la conduite de systèmes, Labo/service de l'auteur, Ville service, Pays service., Jun 2011, Rouen, France
Conference papers hal-02744532v1
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An adaptive sampling method using Hidden Markov Random Fields for the mapping of weed at the field scale

Mathieu Bonneau , Sabrina S. Gaba , Nathalie Dubois Peyrard Peyrard , Régis Sabbadin
EWRS 2011 - 4th Workshop of the EWRS Working Group Weeds and Biodiversity, Labo/service de l'auteur, Ville service, Pays service., 2011, Dijon, France
Conference papers hal-02802213v1
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Solving adaptive sampling problems in graphical models using Markov decision process

Mathieu Bonneau , Nathalie Dubois Peyrard , Régis Sabbadin
ECCS10 European Conference on Complex Systems, 2010, Lisbonne, Portugal
Conference papers hal-01607684v1

Echantillonnage spatial basé sur le krigeage pour la reconstruction de carte d’occurrence

Mathieu Bonneau , Nathalie Dubois Peyrard Peyrard , Régis Sabbadin
17. Congrès francophone AFRIF-AFIA : Reconnaissance des Formes et Intelligence Artificielle. RFIA 2010., Jan 2010, Caen, France. 8 p
Conference papers hal-02755228v1