Olivier Panaud

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Publications

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Oryza genome evolution through a tetraploid lens

Alice Fornasiero , Tao Feng , Noor Al-Bader , Aseel Alsantely , Saule Mussurova et al.
Nature Genetics, 2025, ⟨10.1038/s41588-025-02183-5⟩
Article dans une revue hal-05063705 v1
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Genome of the early spider-orchid Ophrys sphegodes provides insights into sexual deception and pollinator adaptation

Alessia Russo , Mattia Alessandrini , Moaine El Baidouri , Daniel Frei , Teresa Rosa Galise et al.
Nature Communications, 2024, 15 (1), pp.6308. ⟨10.1038/s41467-024-50622-4⟩
Article dans une revue hal-04664022 v1
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Genome-wide analysis of horizontal transfer in non-model wild species from a natural ecosystem reveals new insights into genetic exchange in plants

Emilie Aubin , Christel Llauro , Joseph Garrigue , Marie Mirouze , Olivier Panaud et al.
PLoS Genetics, 2023, 19 (10), pp.e1010964. ⟨10.1371/journal.pgen.1010964⟩
Article dans une revue hal-04274792 v1
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Horizontal Gene Transfers in Plants

Emilie Aubin , Moaine El Baidouri , Olivier Panaud
Life, 2021, 11 (8), pp.857. ⟨10.3390/life11080857⟩
Article dans une revue hal-03443232 v1
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Whole plastid genome-based phylogenomics supports an inner placement of the O. insectifera group rather than a basal position in the rapidly diversifying Ophrys genus (Orchidaceae)

Joris Bertrand , Anaïs Gibert , Christel Llauro , Olivier Panaud
Botany Letters, 2021, 168 (3), pp.452-457. ⟨10.1080/23818107.2021.1893216⟩
Article dans une revue hal-03375011 v1
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The Ecology of the Genome and the Dynamics of the Biological Dark Matter

Alheli Flores-Ferrer , Anne Nguyen , Sylvain Glémin , Jean-Marc Deragon , Olivier Panaud et al.
Journal of Theoretical Biology, 2021, 518, pp.110641. ⟨10.1016/j.jtbi.2021.110641⟩
Article dans une revue hal-03157289 v1
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Construction and characterisation of a knock-down RNA interference line of OsNRPD1 in rice (Oryza sativa ssp japonica cv Nipponbare)

Emilie Debladis , Tzuu-Fen Lee , Yan-Jiun Huang , Jui-Hsien Lu , Sandra M. Mathioni et al.
Philosophical Transactions of the Royal Society B: Biological Sciences, 2020, 375 (1795), pp.20190338. ⟨10.1098/rstb.2019.0338⟩
Article dans une revue hal-04274817 v1
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The impact of transposable elements on the structure, evolution and function of the rice genome

Roland Akakpo , Marie-Christine Carpentier , Yue Ie Hsing , Olivier Panaud
New Phytologist, 2020, ⟨10.1111/nph.16356⟩
Article dans une revue hal-02434127 v1
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Retrotranspositional landscape of Asian rice revealed by 3000 genomes

Marie-Christine Carpentier , Ernandes Manfroi , Fu-Jin Wei , Hshin-Ping Wu , Eric Lasserre et al.
Nature Communications, 2019, 10 (1), ⟨10.1038/s41467-018-07974-5⟩
Article dans une revue hal-02098307 v1
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Characterization of the complete plastome of Ophrys aveyronensis , a Euro-Mediterranean orchid with an intriguing disjunct geographic distribution

Joris Bertrand , Anaïs Gibert , Christel Llauro , Olivier Panaud
Mitochondrial DNA Part B Resources, 2019, 4 (2), pp.3256-3257. ⟨10.1080/23802359.2019.1670748⟩
Article dans une revue hal-02297851 v1
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Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza

Joshua Stein , Yeisoo Yu , Dario Copetti , Derrick Zwickl , Li Zhang et al.
Nature Genetics, 2018, 50 (2), pp.285-296. ⟨10.1038/s41588-018-0040-0⟩
Article dans une revue hal-02098593 v1
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QTL Mapping Combined With Comparative Analyses Identified Candidate Genes for Reduced Shattering in Setaria italica

Sandra Odonkor , Soyeon Choi , Debkanta Chakraborty , Liliam Martinez-Bello , Xuewen Wang et al.
Frontiers in Plant Science, 2018, 9, pp.1-9. ⟨10.3389/fpls.2018.00918⟩
Article dans une revue hal-02098582 v1
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Oak genome reveals facets of long lifespan

Christophe Plomion , Jean-Marc Aury , Joelle Amselem , Thibault Leroy , Florent Murat et al.
Nature Plants, 2018, 4 (7), pp.440-452. ⟨10.1038/s41477-018-0172-3⟩
Article dans une revue hal-01820559 v1

QTL Mapping Combined With Comparative Analyses Identified Candidate Genes for Reduced Shattering in Setaria italica

Sandra Odonkor , Soyeon Choi , Debkanta Chakraborty , Liliam Martinez-Bello , Xuewen Wang et al.
Frontiers in Plant Science, 2018, 9, ⟨10.3389/fpls.2018.00918⟩
Article dans une revue hal-04296727 v1
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Detection of active transposable elements in Arabidopsis thaliana using Oxford Nanopore Sequencing technology

Emilie Debladis , Christel Llauro , Marie-Christine Carpentier , Marie Mirouze , Olivier Panaud
BMC Genomics, 2017, 18, art. 537 [8 p.]. ⟨10.1186/s12864-017-3753-zg⟩
Article dans une revue ird-01626046 v1
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Sequencing the extrachromosomal circular mobilome reveals retrotransposon activity in plants

Sophie Lanciano , Marie-Christine Carpentier , Christel Llauro , Edouard Jobet , Dagmara Robakowska-Hyzorek et al.
PLoS Genetics, 2017, 13 (2), pp.e1006630. ⟨10.1371/journal.pgen.1006630⟩
Article dans une revue hal-02098598 v1

Horizontal transfers of transposable elements in eukaryotes: The flying genes

Olivier Panaud
Comptes Rendus. Biologies, 2016, 339 (7-8), pp.296-299. ⟨10.1016/j.crvi.2016.04.013⟩
Article dans une revue hal-02099878 v1
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DNA transposon activity is associated with increased mutation rates in genes of rice and other grasses

Thomas Wicker , Yeisoo Yu , Georg Haberer , Klaus Mayer , Pradeep Reddy Marri et al.
Nature Communications, 2016, 7 (1), pp.12790 (2016). ⟨10.1038/ncomms12790⟩
Article dans une revue hal-02099869 v1

Evolution of Plant Phenotypes, from Genomes to Traits

Josep Casacuberta , Scott Jackson , Olivier Panaud , Michael Purugganan , Jonathan F. Wendel
G3, 2016, 6 (4), pp.775-778. ⟨10.1534/g3.115.025502⟩
Article dans une revue hal-02099871 v1
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A new approach for annotation of transposable elements using small RNA mapping.

Moaine El Baidouri , Kyung Do Kim , Brian Abernathy , Siwaret Arikit , Florian Maumus et al.
Nucleic Acids Research, 2015, 43 (13), pp.e84. ⟨10.1093/nar/gkv257⟩
Article dans une revue hal-01215276 v1
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Abiotic stress and genome dynamics: specific genes and transposable elements response to iron excess in rice

Taciane Finatto , Antonio Costa de Oliveira , Cristian Chaparro , L.C. da Maia , D.R. Farias et al.
Rice, 2015, 8, pp.13. ⟨10.1186/s12284-015-0045-6⟩
Article dans une revue hal-01162622 v1
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RiTE database: a resource database for genus-wide rice genomics and evolutionary biology

Dario Copetti , Jianwei Zhang , Moaine El Baidouri , Dongying Gao , Jun Wang et al.
BMC Genomics, 2015, 16 (1), pp.538. ⟨10.1186/s12864-015-1762-3⟩
Article dans une revue hal-02099881 v1

Drivers and dynamics of diversity in plant genomes.

Olivier Panaud , Scott A Jackson , Jonathan F Wendel
New Phytologist, 2014, 202 (1), pp.15-8
Article dans une revue hal-01218167 v1
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The genome sequence of African rice (Oryza glaberrima) and evidence for independent domestication

Muhua Wang , Yeisoo Yu , Georg Haberer , Pradeep Reddy Marri , Chuanzhu Fan et al.
Nature Genetics, 2014, 46 (9), pp.982-988. ⟨10.1038/ng.3044⟩
Article dans une revue hal-02099904 v1
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Plant root transcriptome profiling reveals a strain-dependent response during Azospirillum-rice cooperation

Benoît Drogue , Hervé Sanguin , Amel Chamam , Michael Mozar , Christel Llauro et al.
Frontiers in Plant Science, 2014, 5, pp.1-14. ⟨10.3389/fpls.2014.00607⟩
Article dans une revue hal-02099891 v1
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Widespread and frequent horizontal transfers of transposable elements in plants.

Moaine El Baidouri , Marie-Christine Carpentier , Richard Cooke , Dongying Gao , Eric Lasserre et al.
Genome Research, 2014, 24 (5), pp.831-8. ⟨10.1101/gr.164400.113⟩
Article dans une revue hal-01218140 v1

Use of Next Generation Sequencing (NGS) Technologies for the Genome-Wide Detection of Transposition

Moaine Elbaidouri , Cristian Chaparro , Olivier Panaud
Methods in Molecular Biology, 2013, pp.265-274. ⟨10.1007/978-1-62703-568-2_19⟩
Article dans une revue hal-02102445 v1
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Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida.

Jonas Collén , Betina Porcel , Wilfrid Carré , Steven G Ball , Cristian Chaparro et al.
Proceedings of the National Academy of Sciences of the United States of America, 2013, 110 (13), pp.5247-52. ⟨10.1073/pnas.1221259110⟩
Article dans une revue hal-01073830 v1

Comparative Genomic Paleontology across Plant Kingdom Reveals the Dynamics of TE-Driven Genome Evolution

Moaine El Baidouri , Olivier Panaud
Genome Biology and Evolution, 2013, 5 (5), pp.954-965. ⟨10.1093/gbe/evt025⟩
Article dans une revue hal-02102447 v1

The banana (Musa acuminata) genome and the evolution of monocotyledonous plants.

Angélique d'Hont , France Denoeud , Jean-Marc Aury , Franc-Christophe Baurens , Françoise Carreel et al.
Nature, 2012, 488 (7410), pp.213-7. ⟨10.1038/nature11241⟩
Article dans une revue hal-00855582 v1

Reference genome sequence of the model plant Setaria

Jeffrey Bennetzen , Jeremy J. Schmutz , Hao Wang , Ryan Percifield , Jennifer Hawkins et al.
Nature Biotechnology, 2012, 30 (6), pp.555-561. ⟨10.1038/nbt.2196⟩
Article dans une revue hal-02114330 v1
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Isolation and characterisation of a bacterial strain degrading the herbicide sulcotrione from an agricultural soil

Christophe Calvayrac , Fabrice Martin-Laurent , Alexia Faveaux , Nathalie Picault , Olivier Panaud et al.
Pest Management Science, 2012, 68 (3), pp.340-347. ⟨10.1002/ps.2263⟩
Article dans une revue hal-01137037 v1

Comparative genomic paleontology across plant kingdom reveals the dynamics of TE-driven genome evolution.

Moaine El Baidouri , Olivier Panaud
Genome Biology and Evolution, 2012, 5 (5), pp.954-65
Article dans une revue hal-01218174 v1
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International Congress on Transposable Elements (ICTE) 2012 in Saint Malo and the sea of TE stories.

Abdelkader Aïnouche , Mireille Bétermier , Mick Chandler , Richard Cordaux , Gaël Cristofari et al.
Mobile DNA, 2012, 3 (1), pp.17. ⟨10.1186/1759-8753-3-17⟩
Article dans une revue inserm-00764323 v1

Transpositional landscape of the rice genome revealed by paired-end mapping of high-throughput re-sequencing data

Francois Sabot , Nathalie Picault , Moaine El-Baidouri , Christel Llauro , Cristian Chaparro et al.
The Plant Journal, 2011, 66 (2), pp.241-246. ⟨10.1111/j.1365-313X.2011.04492.x⟩
Article dans une revue hal-02114338 v1

The genome of Theobroma cacao.

Xavier Argout , Jerome Salse , Jean-Marc Aury , Mark J Guiltinan , Gaetan Droc et al.
Nature Genetics, 2011, 43 (2), pp.101-8. ⟨10.1038/ng.736⟩
Article dans une revue hal-00855922 v1

RDA derived Oryza minuta-specific clones to probe genomic conservation across Oryza and introgression into rice (O. sativa L.)

Junghyun Shim , Olivier Panaud , Clémentine Vitte , Merlyn S. Mendioro , Darshan S. Brar
Euphytica, 2010, 176 (2), pp.269 - 279. ⟨10.1007/s10681-010-0245-5⟩
Article dans une revue istex hal-02664386 v1

Paleogenomic analysis of the short arm of chromosome 3 reveals the history of the African and Asian progenitors of cultivated rices.

Anne Roulin , Cristian Chaparro , Benoit Piegu , Scott Jackson , Olivier Panaud
Genome Biology and Evolution, 2010, 2, pp.132-9. ⟨10.1093/gbe/evq005⟩
Article dans une revue hal-00787403 v1

A genetic model for the female sterility barrier between Asian and African cultivated rice species.

Andrea Garavito , Romain Guyot , Jaime Lozano , Frédérick F. Gavory , Sylvie Samain et al.
Genetics, 2010, 185 (4), pp.1425-40. ⟨10.1534/genetics.110.116772⟩
Article dans une revue hal-00787398 v1
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Whole genome surveys of rice, maize and sorghum reveal multiple horizontal transfers of the LTR-retrotransposon Route66 in Poaceae.

Anne Roulin , Benoit Piegu , Philippe M Fortune , François Sabot , Angélique d'Hont et al.
BMC Evolutionary Biology, 2009, 9 (58), pp.58. ⟨10.1186/1471-2148-9-58⟩
Article dans une revue hal-00693471 v1

Reply: A unified classification system for eukaryotic transposable elements should reflect their phylogeny

Thomas Wicker , Francois Sabot , Aurélie Hua-Van , Jeffrey L. Bennetzen , Pierre Capy et al.
Nature Reviews Genetics, 2009, 10 (4), pp.276-276. ⟨10.1038/nrg2165-c4⟩
Article dans une revue hal-01189545 v1

Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas.

Alexandra Z Worden , Jae-Hyeok Lee , Thomas Mock , Pierre Rouzé , Melinda P Simmons et al.
Science, 2009, 324 (5924), pp.268-72. ⟨10.1126/science.1167222⟩
Article dans une revue hal-00693449 v1

Identification of an active LTR retrotransposon in rice.

Nathalie Picault , Cristian Chaparro , Cristel Llauro , Benoit Piegu , Willfried Stenger et al.
The Plant Journal, 2009, 58 (5), pp.754-65. ⟨10.1111/j.1365-313X.2009.03813.x⟩
Article dans une revue hal-00685656 v1

A unified classification system for eukaryotic transposable elements should reflect their phylogeny Reply.

T. Wicker , F. Sabot , A. Hua Van , J. L. Bennetzen , P. Capy et al.
Nature Reviews Genetics, 2009, 10, pp.00-00
Article dans une revue hal-00462118 v1

The molecular bases of cereal domestication and the history of rice.

Olivier Panaud
Comptes Rendus. Biologies, 2009, 332 (2-3), pp.267-72. ⟨10.1016/j.crvi.2008.09.003⟩
Article dans une revue istex hal-00693484 v1

Diversity of the Ty-1 copia retrotransposon Tos17 in rice (Oryza sativa L.) and the AA genome of the Oryza genus.

Julie Petit , Emmanuelle Bourgeois , Wilfried Stenger , Martine Bès , Gaétan Droc et al.
Molecular Genetics and Genomics, 2009, 282 (6), pp.633-52. ⟨10.1007/s00438-009-0493-z⟩
Article dans une revue istex hal-00693499 v1

The Rice Annotation Project Database (RAP-DB): 2008 update.

Tsuyoshi Tanaka , Baltazar A Antonio , Shoshi Kikuchi , Takashi Matsumoto , Yoshiaki Nagamura et al.
Nucleic Acids Research, 2008, 36 (Database issue), pp.D1028-33. ⟨10.1093/nar/gkm978⟩
Article dans une revue hal-00300215 v1
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Identification of precursor transcripts for 6 novel miRNAs expands the diversity on the genomic organisation and expression of miRNA genes in rice.

Séverine Lacombe , Hiroshi Nagasaki , Carole Santi , David Duval , Benoit Piegu et al.
BMC Plant Biology, 2008, 8, pp.123. ⟨10.1186/1471-2229-8-123⟩
Article dans une revue hal-00366386 v1

A universal classification of eukaryotic transposable elements implemented in Repbase

Thomas Wicker , Francois Sabot , Aurélie Hua-Van , Jeffrey L. Bennetzen , Pierre Capy et al.
Nature Reviews Genetics, 2008, 9 (5), pp.414. ⟨10.1038/nrg2165-c2⟩
Article dans une revue hal-01189557 v1

Evidence of multiple horizontal transfers of the long terminal repeat retrotransposon RIRE1 within the genus Oryza

Anne Roulin , Benoit Piegu , Rod Wing , Olivier Panaud
The Plant Journal, 2008, 53 (6), pp.950-959. ⟨10.1111/j.1365-313X.2007.03388.x⟩
Article dans une revue hal-02114361 v1

A unified classification system for eukaryotic transposable elements.

T. Wicker , F. Sabot , A. Hua Van , J. L. Bennetzen , P. Capy et al.
Nature Reviews Genetics, 2007, 8, pp.973-982
Article dans une revue hal-00169819 v1

Spip and Squiq, two novel rice non-autonomous LTR retro-element families related to RIRE3 and RIRE8

Clémentine Vitte , Cristian Chaparro , Hadi H. Quesneville , Olivier Panaud
Plant Science, 2007, 172 (1), pp.8-19. ⟨10.1016/j.plantsci.2006.07.008⟩
Article dans une revue istex hal-02114377 v1

Evolutionary dynamics of an ancient retrotransposon family provides insights into evolution of genome size in the genus Oryza

Jetty Ammiraju , Andrea Zuccolo , Yeisoo Yu , Xiang Song , Benoit Piegu et al.
The Plant Journal, 2007, 52 (2), pp.342-351. ⟨10.1111/j.1365-313X.2007.03242.x⟩
Article dans une revue hal-02114387 v1

RetrOryza: a database of the rice LTR-retrotransposons.

Cristian Chaparro , Romain Guyot , Andrea Zuccolo , Benoit Piegu , Olivier Panaud
Nucleic Acids Research, 2007, 35 (Database issue), pp.D66-70. ⟨10.1093/nar/gkl780⟩
Article dans une revue hal-00164403 v1

A unified classification system for eukaryotic transposable elements should reflect their phylogeny

Thomas Wicker , Francois Sabot , Aurélie Hua-Van , Jeffrey L. Bennetzen , Pierre Capy et al.
Nature Reviews Genetics, 2007, 8 (12), pp.973-982. ⟨10.1038/nrg2165⟩
Article dans une revue hal-01189458 v1
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LTR retrotransposons in rice (Oryza sativa, L.): recent burst amplifications followed by rapid DNA loss

Clémentine Vitte , Olivier Panaud , Hadi H. Quesneville
BMC Genomics, 2007, 8 (1), pp.218. ⟨10.1186/1471-2164-8-218⟩
Article dans une revue hal-02114382 v1

Doubling genome size without polyploidization: dynamics of retrotransposition-driven genomic expansions in Oryza australiensis, a wild relative of rice.

Benoit Piegu , Romain Guyot , Nathalie Picault , Anne Roulin , Abhijit Saniyal et al.
Genome Research, 2006, 16 (10), pp.1262-9. ⟨10.1101/gr.5290206⟩
Article dans une revue hal-00164404 v1

Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features.

Evelyne Derelle , Conchita Ferraz , Stephane Rombauts , Pierre Rouzé , Alexandra Z Worden et al.
Proceedings of the National Academy of Sciences of the United States of America, 2006, 103 (31), pp.11647-52. ⟨10.1073/pnas.0604795103⟩
Article dans une revue hal-00164247 v1

LTR retrotransposons and flowering plant genome size: emergence of the increase/decrease model.

C. Vitte , O. Panaud
Cytogenetic and Genome Researchearch, 2005, 110 (1-4), pp.91-107. ⟨10.1159/000084941⟩
Article dans une revue hal-00168793 v1

LTR retrotransposons and flowering plant genome size: emergence of the increase/decrease model

C. Vitte , O. Panaud
Cytogenetic and Genome Research, 2005, 110 (1-4), pp.91-107. ⟨10.1159/000084941⟩
Article dans une revue hal-04305951 v1

Genomic paleontology provides evidence for two distinct origins of Asian rice (Oryza sativa L.)

C. Vitte , T. Ishii , F. Lamy , D. Brar , O. Panaud
Molecular Genetics and Genomics, 2004, 272 (5), pp.504-511. ⟨10.1007/s00438-004-1069-6⟩
Article dans une revue istex hal-04305849 v1

Formation of Solo-LTRs Through Unequal Homologous Recombination Counterbalances Amplifications of LTR Retrotransposons in Rice Oryza sativa L.

C. Vitte , Olivier Panaud
Molecular Biology and Evolution, 2003, 20 (4), pp.528-540. ⟨10.1093/molbev/msg055⟩
Article dans une revue hal-04305865 v1

Characterization of transposable elements in the genome of rice (Oryza sativa L.) using Representational Difference Analysis (RDA)

O. Panaud , C. Vitte , J. Hivert , S. Muzlak , J. Talag et al.
Molecular Genetics and Genomics, 2002, 268 (1), pp.113-121. ⟨10.1007/s00438-002-0734-x⟩
Article dans une revue istex hal-04305880 v1

Unmanaged sexual reproduction and the dynamics of genetic diversity of a vegetatively propagated crop plant, cassava ( Manihot esculenta Crantz), in a traditional farming system

M. Elias , L. Penet , P. Vindry , D. Mckey , O. Panaud et al.
Molecular Ecology, 2001, 10 (8), pp.1895-1907. ⟨10.1046/j.0962-1083.2001.01331.x⟩
Article dans une revue istex hal-04154369 v1

Assessment of genetic relationships between Setaria italica and its wild relative S. viridis using AFLP markers

Maud Le Thierry D’ennequin , Olivier Panaud , Bruno Toupance , Aboubakry Sarr
TAG Theoretical and Applied Genetics, 2000, 100, pp.1061-1066. ⟨10.1007/s001220051387⟩
Article dans une revue istex hal-02123002 v1

Suivi des introgressions dans les croisements interspécifiques chez le riz: utilisation des marqueurs moléculaires

A Ghesquière , O Panaud , Philippe Marmey , Mc Gavalda , O Leblanc et al.
Genetics Selection Evolution, 1994, 26 (Suppl 1), pp.S67. ⟨10.1186/1297-9686-26-S1-S67⟩
Article dans une revue hal-03782059 v1
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Suivi des introgressions dans les croisements interspécifiques chez le riz : utilisation des marqueurs moléculaires

A Ghesquière , O Panaud , P Marmey , Mc Gavalda , O Leblanc et al.
Genetics Selection Evolution, 1994, 26 (Suppl1), pp.67s-80s
Article dans une revue hal-00894055 v1
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TEs as a major driver of genomic variation in trees ? Jumping MITEs in common beech revealed by TIPs and eccDNA

Abirami Soundiramourtty , Lauren Clement , Christel Llauro , Olivier Panaud , Christophe Plomion et al.
ICTE 2024 - International Congress on Transposable Elements, Apr 2024, Saint Malo, France.
Poster de conférence hal-04907176 v1
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Detection of transcriptomic structural variations in wild rice using Nanopore direct RNA sequencing.

Marie-Christine Carpentier , Christel Llauro , Eric Lasserre , Marie Mirouze , Rod A. Wing et al.
JOBIM 2024: JOURNéES OUVERTES DE BIOLOGIE, INFORMATIQUE ET MATHéMATIQUES 2024, Jun 2024, TOULOUSE Université Paul Sabatier, France
Poster de conférence hal-04919310 v1
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Structural variation involving transposable elements associated with grain width in cultivated rice.

Marie-Christine Carpentier , Christel Llauro , Wan-Yi Qiu , Yue-Ie Hsing , Olivier Panaud
JOBIM 2022: JOURNéES OUVERTES DE BIOLOGIE, INFORMATIQUE ET MATHéMATIQUES 2022, Jul 2022, RENNES, France
Poster de conférence hal-04919402 v1

Croiser les approches du vivant : vers une écopoétique transdisciplinaire de la forêt

Caroline Granger , Olivier Panaud , Bénédicte Meillon
Echos poétiques de la forêt, UPVD, 2022, Perpignan, France
Communication dans un congrès hal-04301375 v1

Using long-read nanopore sequencing to unravel structural genomic variations in plants

Marie-Christine Carpentier , Hshin-Ping Wu , Fu-Jin Wei , Christel Llauro , Marie Mirouze et al.
Nanopore London Calling 2019, Oxford Nanopore, May 2019, Londres (UK), United Kingdom
Communication dans un congrès hal-04919461 v1

Unraveling the Retrotranspositional Landscape of Rice at Species Level using 3000 Genomes

Marie-Christine Carpentier , Ernandes Manfroi , Fu-Jin Wei , Hshin-Ping Wu , Eric Lasserre et al.
22nd National Congress on Transposable Elements - MobileET- Bioinformatics Days, Jul 2019, Lyon, France
Communication dans un congrès hal-04919526 v1

Unraveling the Retrotranspositional Landscape of Rice at Species Level using 3000 Genomes

Marie-Christine Carpentier , Ernandes Manfroi , Fu-Jin Wei , Hshin-Ping Wu , Eric Lasserre et al.
Plant and Animal Genomics Conference XXVII, Jan 2019, SAN DIEGO CA, United States
Communication dans un congrès hal-04919501 v1

Sequencing mobilome reveals real time transposable element activity in plants and animals

Marie Mirouze , Sophie Lanciano , Sophie Lanciano , Marie-Christine Carpentier , Christel Llauro et al.
Conference on Epigenetic & Chromatin Regulation of Plant Traits, EpiTRAITS, Jan 2016, Strasbourg, France
Communication dans un congrès hal-04908203 v1

Contribution au developpement et a l'utilisation des cartes genetiques moleculaires en genetique des riz

Gérard Second , Anna Ghesquiere , Mathilde M. Causse , O. Panaud
Colloque international en hommage a Jean Pernes, Jan 1992, Paris, France
Communication dans un congrès hal-02776970 v1

Genome-Wide Analysis of Transposition Using Next Generation Sequencing Technologies

Moaine Elbaidouri , Olivier Panaud
Plant Transposable Elements. Topics in Current Genetics, vol 24. Springer, Berlin, Heidelberg, pp.59-70, 2012
Chapitre d'ouvrage hal-02114320 v1

Plant Transposable Elements

Jean-Marc Deragon , J.M. Casacuberta , O. Panaud
Plant Genomes, KARGER, pp.69-82, 2008, ⟨10.1159/000126007⟩
Chapitre d'ouvrage hal-04930917 v1

From Rice to Other Cereals: Comparative Genomics

Richard Cooke , Benoit Piegu , Olivier Panaud , Romain Guyot , Jérôme Salse et al.
Rice Functional Genomics, Springer New York, pp.429-479, 2007
Chapitre d'ouvrage hal-02114392 v1