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Pascal Frey

159
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Researcher identifiers

Presentation

Directeur de Recherches, HDR INRAE, Université de Lorraine UMR1136 "Interactions Arbres - Microorganismes" F-54280 Champenoux, FRANCE E-mail: pascal.frey at inrae.fr [https://mycor.nancy.inra.fr/IAM/?page\_id=731](https://mycor.nancy.inra.fr/IAM/?page_id=731) Directeur de l’[UMR1136 “Interactions Arbres-Microorganismes“](https://mycor.nancy.inra.fr/IAM/) Président de la [Société Française de Phytopathologie](https://www.sfp-asso.org/) (2008-2011, 2011-2014), membre depuis 1990. Coordinateur de la Division 7.02.05 “Rust of Forest Trees” de l’[IUFRO](https://www.iufro.org/) depuis 2014. Membre de l’[American Phytopathological Society](https://www.apsnet.org/) (APS) depuis 2005. Thématique de recherche : Biologie et génétique des populations d'agents pathogènes forestiers.

Publications

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A mechanistic-statistical approach to infer dispersal and demography from invasion dynamics, applied to a plant pathogen

Méline Saubin , Jérôme Coville , Constance Xhaard , Pascal Frey , Samuel Soubeyrand
Peer Community Journal, 2024, 4, pp.e9. ⟨10.24072/pcjournal.356⟩
Journal articles hal-04430456v1
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A remarkable expansion of oligopeptide transporter genes in rust fungi (Pucciniales) suggests a specialization in nutrients acquisition for obligate biotrophy

Pamela Guerillot , Asaf Salamov , Clémentine Louet , Emmanuelle Morin , Pascal Frey
Phytopathology, 2023, 113 (2), pp.252-264. ⟨10.1094/PHYTO-04-22-0128-R⟩
Journal articles hal-03847696v1
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Improving sustainable crop protection using population genetics concepts

Méline Saubin , Clémentine Louet , Lydia Bousset , Frédéric Fabre , Pascal Frey
Molecular Ecology, 2023, 32 (10), pp.2461-2471. ⟨10.1111/mec.16634⟩
Journal articles hal-03394837v2
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A point mutation and large deletion at the candidate avirulence locus AvrMlp7 in the poplar rust fungus correlate with poplar RMlp7 resistance breakdown

Clémentine Louet , Méline Saubin , Axelle Andrieux , Antoine Persoons , Mathilde Gorse
Molecular Ecology, 2023, 32 (10), pp.2472-2483. ⟨10.1111/mec.16294⟩
Journal articles hal-03510966v1
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A survey of highly influential studies on plant pathogen effectors during the last two decades (2000-2020).

Clémentine Louet , Sébastien Duplessis , Pascal Frey , Benjamin Petre
Frontiers in Plant Science, 2022, 13, pp.920281. ⟨10.3389/fpls.2022.920281⟩
Journal articles hal-03849040v1
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Annotation survey and life cycle transcriptomics of transcription factors in rust fungi (Pucciniales) identify a possible role for cold shock proteins in dormancy exit

Clémentine Louet , Carla Blot , Ekaterina Shelest , Pamela Guerillot , Asaf Salamov
Fungal Genetics and Biology, 2022, 161, pp.103698. ⟨10.1016/j.fgb.2022.103698⟩
Journal articles hal-03847622v1
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Genomic Signatures of a Major Adaptive Event in the Pathogenic Fungus Melampsora larici-populina

Antoine Persoons , Agathe Maupetit , Clémentine Louet , Axelle Andrieux , Anna Lipzen
Genome Biology and Evolution, 2022, 14 (1), 14 p. ⟨10.1093/gbe/evab279⟩
Journal articles hal-03606205v1
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Evolution of morphological but not aggressiveness‐related traits following a major resistance breakdown in the poplar rust fungus, Melampsora larici‐populina

Agathe Maupetit , Bénédicte Fabre , Jérémy Pétrowski , Axelle Andrieux , Stéphane de Mita
Evolutionary Applications, 2021, 14 (2), pp.513-523. ⟨10.1111/eva.13136⟩
Journal articles hal-03052529v1
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Defense Compounds Rather Than Nutrient Availability Shape Aggressiveness Trait Variation Along a Leaf Maturity Gradient in a Biotrophic Plant Pathogen

Agathe Maupetit , Romain Larbat , Michaël Pernaci , Axelle Andrieux , Cécile Guinet
Frontiers in Plant Science, 2018, 9, pp.1-13. ⟨10.3389/fpls.2018.01396⟩
Journal articles hal-01901489v1
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Émergence de maladies sur peupliers ou la course aux armements entre l’améliorateur et les maladies (Résumé)

Pascal Frey , Katherine J. Hayden , Fabien Halkett
Revue forestière française, 2018, 70 (6), pp.643-644. ⟨10.4267/2042/70315⟩
Journal articles hal-03447441v1
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The Rust Fungus Melampsora larici-populina Expresses a Conserved Genetic Program and Distinct Sets of Secreted Protein Genes During Infection of Its Two Host Plants, Larch and Poplar

Cécile Lorrain , Clémence Marchal , Stéphane Hacquard , Christine Delaruelle , Jeremy Petrowski
Molecular Plant-Microbe Interactions, 2018, 31 (7), pp.695-706. ⟨10.1094/MPMI-12-17-0319-R⟩
Journal articles hal-01893935v1
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The escalatory Red Queen

Antoine Persoons , Katherine Hayden , Bénédicte Fabre , Pascal Frey , Stéphane de Mita
Molecular Ecology, 2017, 26 (7), pp.1902-1918. ⟨10.1111/mec.13980⟩
Journal articles hal-01564550v1
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Genetic Diversity and Origins of the Homoploid-Type Hybrid Phytophthora ×alni

Jaime Aguayo , Fabien Halkett , Claude Husson , András Szigethy , József Bakonyi
Applied and Environmental Microbiology, 2016, 82 (24), pp.7142-7153. ⟨10.1128/AEM.02221-16⟩
Journal articles hal-01494736v1
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Genetic signatures of a range expansion in natura: when clones play leapfrog

Ronan Becheler , Constance Xhaard , Etienne K. Klein , Katherine J. Hayden , Pascal Frey
Ecology and Evolution, 2016, 6 (18), pp.6625-6632. ⟨10.1002/ece3.2392⟩
Journal articles hal-01512000v1

Simultaneous monitoring and quantification of Melampsora allii-populina and Melampsora larici-populina on infected poplar leaves using a duplex real-time PCR assay

C. Guinet , A. L. Boutigny , A. Vialle , R. C. Hamelin , Pascal Frey
Plant Pathology, 2016, 65 (3), pp.380-391. ⟨10.1111/ppa.12426⟩
Journal articles hal-01579577v1
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Evidence for homoploid speciation in Phytophthora alni supports taxonomic reclassification in this species complex

Claude Husson , Jaime Aguayo , Cécile Revellin , Pascal Frey , Renaud Ioos
Fungal Genetics and Biology, 2015, 77, pp.12-21. ⟨10.1016/j.fgb.2015.02.013⟩
Journal articles hal-01269090v1
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Genome-wide patterns of segregation and linkage disequilibrium: the construction of a linkage genetic map of the poplar rust fungus Melampsora larici-populina

Michaël Pernaci , Stéphane de Mita , Axelle Andrieux , Jeremy Petrowski , Fabien Halkett
Frontiers in Plant Science, 2014, 5, ⟨10.3389/fpls.2014.00454⟩
Journal articles hal-01269013v1
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Patterns of genomic variation in the poplar rust fungus Melampsora larici-populina identify pathogenesis-related factors

Antoine Persoons , Emmanuelle Morin , Christine Delaruelle , Thibaut Payen , Fabien Halkett
Frontiers in Plant Science, 2014, 5, ⟨10.3389/fpls.2014.00450⟩
Journal articles hal-01269012v1
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Aptitude au contournement d’un gène majeur de résistance quantitative à Melampsora larici-populina : dispositif de criblage rapide, constitution de collections de souches et fréquence du phénomène

Arnaud A. Dowkiw , Pascal Frey , Virginie Diévart , Axelle Andrieux , Constance Xhaard
Innovations Agronomiques, 2014, 35, pp.39-47. ⟨10.17180/hk9w-tw18⟩
Journal articles hal-02629623v1

Microsatellite analysis of Icelandic populations of the poplar fungal pathogen Melampsora larici-populina shows evidence of repeated colonization events

Sigridur Erla Elefsen , Pascal Frey , Halldor Sverrisson , Jon Hallsteinn Hallsson
European Journal of Plant Pathology, 2014, 139 (3), pp.597-608. ⟨10.1007/s10658-014-0416-7⟩
Journal articles hal-01578658v1
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Transcriptome analysis of poplar rust telia reveals overwintering adaptation and tightly coordinated karyogamy and meiosis processes

Stéphane Hacquard , Christine Delaruelle , Pascal Frey , Emilie Tisserant , Annegret Kohler
Frontiers in Plant Science, 2013, 4, ⟨10.3389/fpls.2013.00456⟩
Journal articles hal-01268532v1
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Strong Genetic Differentiation Between North American and European Populations of Phytophthora alni subsp. uniformis.

Jaime Aguayo-Silva , Gerard C. Adams , Fabien Halkett , Mursel Catal , Claude Husson
Phytopathology, 2013, 103 (2), pp.190-199. ⟨10.1094/PHYTO-05-12-0116-R⟩
Journal articles hal-01136978v1

Optimization of a real-time PCR assay for the detection of the quarantine pathogen Melampsora medusae f. sp deltoidae

Anne-Laure Boutigny , Cecile Guinet , Agathe Vialle , Richard C. Hamelin , Axelle Andrieux
Fungal Biology, 2013, 117 (6), pp.389-398. ⟨10.1016/j.funbio.2013.04.001⟩
Journal articles hal-01578665v1
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Development and use of new sensitive molecular tools for diagnosis and detection of [i]Melampsora[/i] rusts on cultivated poplar

Claude Husson , Renaud Ioos , Axelle Andrieux , Pascal Frey
Forest Pathology, 2013, 43 (1), pp.1-11. ⟨10.1111/efp.12007⟩
Journal articles hal-01136979v2

A sensitive real-time PCR assay for the detection of the two Melampsora medusae formae speciales on infected poplar leaves

Anne-Laure Boutigny , Cecile Guinet , Agathe Vialle , Richard Hamelin , Pascal Frey
European Journal of Plant Pathology, 2013, 136 (3), pp.433 - 441. ⟨10.1007/s10658-013-0180-0⟩
Journal articles hal-01268075v1

Three-year investigations on leaf rust of poplar cultivated for biomass production in Umbria, Central Italy

Lorenzo Covarelli , Giovanni Beccari , Laura Tosi , Bénédicte Fabre , Pascal Frey
Biomass and Bioenergy, 2013, 49, pp.315 - 322. ⟨10.1016/j.biombioe.2012.12.032⟩
Journal articles hal-01268189v1

Phylogenetic species recognition reveals host-specific lineages among poplar rust fungi

Agathe Vialle , Nicolas Feau , Pascal Frey , Louis Bernier , Richard C. Hamelin
Molecular Phylogenetics and Evolution, 2013, 66 (3), pp.628 - 644. ⟨10.1016/j.ympev.2012.10.021⟩
Journal articles hal-01577787v1
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Disentangling the genetic origins of a plant pathogen during disease spread using an original molecular epidemiology approach

Constance Xhaard , Benoît Barres , Axelle Andrieux , Lydia Bousset , Fabien Halkett
Molecular Ecology, 2012, 21 (10), pp.2383-2398. ⟨10.1111/j.1365-294X.2012.05556.x⟩
Journal articles hal-01191214v1

Exploring the role of asexual multiplication in poplar rust epidemics: impact on diversity and genetic structure

Benoît Barres , Christian Cyril Dutech , Axelle Andrieux , Fabien Halkett , Pascal Frey
Molecular Ecology, 2012, 21 (20), pp.4996-5008. ⟨10.1111/mec.12008⟩
Journal articles hal-02646739v1
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A comprehensive analysis of genes encoding small secreted proteins identifies candidate effectors in Melampsora larici-populina (poplar leaf rust).

Stéphane Hacquard , David L. Joly , Yao-Cheng Lin , Emilie Tisserant , Nicolas Feau
Molecular Plant-Microbe Interactions, 2012, 25 (3), pp.279-293. ⟨10.1094/MPMI-09-11-0238⟩
Journal articles hal-01267890v1

Impact of ectomycorrhizal colonization and rust infection on the secondary metabolism of poplar (Populus trichocarpa x deltoides)

Cornelia Pfabel , Kai-Uwe Eckhardt , Christel Baum , Christine Struck , Pascal Frey
Tree Physiology, 2012, 32 (11), pp.1357 - 1364. ⟨10.1093/treephys/tps093⟩
Journal articles hal-01268267v1
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The poplar-poplar rust interaction: insights from genomics and transcriptomics

Stéphane S. Hacquard , Benjamin Petre , Pascal Frey , Arnaud Hecker , Nicolas Rouhier
Journal of Pathogens, 2011, EPUB 2011
Journal articles hal-02642064v1

Poplar rust systematics and refinement of Melampsora species delineation

Agathe Vialle , Pascal Frey , Sarah Hambleton , Louis Bernier , Richard C. Hamelin
Fungal Diversity, 2011, 50 (1), pp.227 - 248. ⟨10.1007/s13225-011-0129-6⟩
Journal articles hal-02646810v1

Predicting invasion success of forest pathogenic fungi from species traits

Aurore A. Philibert , Marie Laure M. L. Desprez Loustau , Bénédicte Fabre , Pascal Frey , Fabien Halkett
Journal of Applied Ecology, 2011, 48 (6), pp.1381 - 1390. ⟨10.1111/j.1365-2664.2011.02039.x⟩
Journal articles hal-01000012v1
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Obligate biotrophy features unraveled by the genomic analysis of rust fungi

Sébastien Duplessis , Christina A C. A. Cuomo , Yao-Cheng Y.-C. Lin , Andrea Aerts , Emilie Tisserant
Proceedings of the National Academy of Sciences of the United States of America, 2011, 108 (22), pp.9166-9171. ⟨10.1073/pnas.1019315108⟩
Journal articles hal-01000169v1
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High-throughput microsatellite isolation through 454 GS-FLX Titanium pyrosequencing of enriched DNA libraries

Thibaut Malausa , André Gilles , Emese Meglécz , Hélène Blancard , Stéphanie Duthoy
Molecular Ecology Resources, 2011, 11 (4), pp.638-644. ⟨10.1111/j.1755-0998.2011.02992.x⟩
Journal articles hal-01506135v1
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Chalara fraxinea is an invasive pathogen in France

Claude Husson , Bruno Scala , Olivier Caël , Pascal Frey , Nicolas Feau
European Journal of Plant Pathology, 2011, 130 (3), pp.311-324. ⟨10.1007/s10658-011-9755-9⟩
Journal articles hal-01136967v1

Melampsora larici-populina transcript profiling during germination and timecourse infection of poplar leaves reveals dynamic expression patterns associated with virulence and biotrophy.

Sébastien Duplessis , Stéphane S. Hacquard , Christine Delaruelle , Emilie Tisserant , Pascal Frey
Molecular Plant-Microbe Interactions, 2011, 24 (7), pp.808-818. ⟨10.1094/MPMI-01-11-0006⟩
Journal articles hal-02650884v1
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The genetic structure of the plant pathogenic fungus Melampsora larici-populina on its wild host is extensively impacted by host domestication

Constance Xhaard , Bénédicte Fabre , Axelle Andrieux , P. Gladieux , Benoît Barres
Molecular Ecology, 2011, 20 (13), pp.2739-2755. ⟨10.1111/j.1365-294X.2011.05138.x⟩
Journal articles hal-01136973v1
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Validation of Melampsora larici-populina reference genes for in planta RT-quantitative PCR expression profiling during time-course infection of poplar leaves

Stéphane S. Hacquard , Claire Veneault-Fourrey , Christine Delaruelle , Pascal Frey , Francis Martin
Physiological and Molecular Plant Pathology, 2011, 75 (3), pp.106-112. ⟨10.1016/j.pmpp.2010.10.003⟩
Journal articles hal-02644005v1

Laser capture microdissection of uredinia formed by Melampsora larici-populina revealed a transcriptional switch between biotrophy and sporulation

Stéphane S. Hacquard , Christine Delaruelle , Valérie Legué , Emilie Tisserant , Annegret Kohler
Molecular Plant-Microbe Interactions, 2010, 23 (10), pp.1275-1286. ⟨10.1094/MPMI-05-10-0111⟩
Journal articles hal-02667759v1
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Development, comparison, and validation of real-time and conventional PCR tools for the detection of the fungal pathogens causing brown spot and red band needle blights of pine

Renaud Ioos , Bénédicte Fabre , Carole Saurat , Céline Fourrier , Pascal Frey
Phytopathology, 2010, 100 (1), pp.105-114. ⟨10.1094/PHYTO-100-1-0105⟩
Journal articles hal-01136983v1
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L’hybridation interspécifique chez les champignons phytopathogènes à l’origine de nouvelles maladies

Pascal Frey
Biofutur, 2009, 28 (296), pp.36-39
Journal articles hal-02664559v1
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Fungal pathogen (mis-) identifications: A case study with DNA barcodes on Melampsora rusts of aspen and white poplar

Nicolas Feau , Agathe Vialle , Mathieu Allaire , Philippe Tanguay , David L. Joly
Mycological Research, 2009, 113 (6-7), pp.713-724. ⟨10.1016/j.mycres.2009.02.007⟩
Journal articles hal-02658399v1
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Interactions entre populations naturelles et cultivés : l’exemple du peuplier

Catherine Bastien , Nicolas Chenault , Arnaud A. Dowkiw , Marc M. Villar , Etienne K. Klein
Biofutur, 2009, 28 (305), pp.31-34
Journal articles hal-02658918v1

Characterization of 41 microsatellite loci developed from the genome sequence of the poplar rust fungus, Melampsora larici-populina

Constance Xhaard , Axelle Andrieux , Fabien Halkett , Pascal Frey
Conservation Genetics Resources, 2009, 1 (1), pp.21-25. ⟨10.1007/s12686-009-9005-z⟩
Journal articles hal-02667477v1
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Genetic structure of the poplar rust fungus Melampsora larici-populina : Evidence for isolation by distance in Europe and recent founder effects overseas

Benoît Barres , Fabien Halkett , Christian Cyril Dutech , Axelle Andrieux , Jean Pinon
Infection, Genetics and Evolution, 2008, 8 (5), pp.577-587. ⟨10.1016/j.meegid.2008.04.005⟩
Journal articles hal-02669196v1
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Distribution and expression of elicitin genes in the interspecific hybrid oomycete Phytophthora alni.

Renaud Ioos , Franck Panabières , Benoit Industri , Axelle Andrieux , Pascal Frey
Applied and Environmental Microbiology, 2007, 73 (17), pp.5587-5597. ⟨10.1128/AEM.00721-07⟩
Journal articles hal-01005054v1

Transcript Profiling of Poplar Leaves upon Infection with Compatible and Incompatible Strains of the Foliar Rust Melampsora larici-populina

Cecile Rinaldi , Annegret Kohler , Pascal Frey , Frédéric Duchaussoy , Francois Ningre
Plant Physiology, 2007, 144 (1), pp.347-366. ⟨10.1104/pp.106.094987⟩
Journal articles hal-01194961v1
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Characterization of microsatellite markers in the interspecific hybrid Phytophthora alni ssp. alni, and cross-amplification with related taxa

Renaud Ioos , Benoît Barres , Axelle Andrieux , Pascal Frey
Molecular Ecology Notes, 2007, 7 (1), pp.133-137. ⟨10.1111/j.1471-8286.2006.01554.x⟩
Journal articles hal-01136981v1
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First Report of Phytophthora ramorum on Ornamental Plants in France

C. Husson , C. Delatour , Pascal Frey , Benoit Marçais , C. Saurat
Plant Disease, 2007, 91 (10), pp.1359. ⟨10.1094/PDIS-91-10-1359B⟩
Journal articles hal-02089812v1
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L’eau, vecteur d’agents pathogènes : cas du Phytophthora de l’Aulne.

Claude Husson , Bénédicte Fabre , Renaud R. Ioos , Pascal Frey , Benoit Marçais
Revue forestière française, 2006, 58 (4), pp.351-360
Journal articles hal-02666788v1
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Wettability of poplar leaves influences dew formation and infection by Melampsora larici-populina.

Jean Pinon , Pascal Frey , Claude Husson
Plant Disease, 2006, 90 (2), pp.177-184. ⟨10.1094/PD-90-0177⟩
Journal articles hal-01136984v1
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Genetic characterization of the natural hybrid species Phytophthora alni as inferred from nuclear and mitochondrial DNA analyses

Renaud Ioos , Axelle Andrieux , Benoit Marçais , Pascal Frey
Fungal Genetics and Biology, 2006, 43 (7), pp.511-529. ⟨10.1016/j.fgb.2006.02.006⟩
Journal articles hal-01136982v1
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Comparison of genetic and virulence diversity of Melampsora larici-populina populations on wild and cultivated poplar and influence of the alternate host

Pierre Gérard , Claude Husson , Jean Pinon , Pascal Frey
Phytopathology, 2006, 96 (9), pp.1027-1036. ⟨10.1094/PHYTO-96-1027⟩
Journal articles hal-01136985v1
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L’eau, vecteur d’agents pathogènes : cas du phytophthora de l’Aulne

Claude Husson , Bénédicte Thoirain , Renaud Ioos , Pascal Frey , Benoît Marçais
Revue forestière française, 2006, 58 (4), pp.351-360. ⟨10.4267/2042/6705⟩
Journal articles hal-03449319v1

Usefulness of single copy genes containing introns in Phytophthora for the development of detection tools for the regulated species P. ramorum and P. fragariae

Renaud R. Ioos , Lise Laugustin , Nathalie Schenck , Sylvie Rose , Claude Husson
European Journal of Plant Pathology, 2006, 116 (2), pp.171-176. ⟨10.1007/s10658-006-9051-2⟩
Journal articles hal-02666217v1

SCAR-based PCR primers to detect the hybrid pathogen Phytophthora alni and its subspecies causing alder disease in Europe

Renaud Ioos , Claude Husson , Axelle Andrieux , Pascal Frey
European Journal of Plant Pathology, 2005, 112, pp.323-335. ⟨10.1007/s10658-005-6233-2⟩
Journal articles hal-02683193v1
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Isolation and characterization of 15 microsatellite loci in the poplar rust fungus, Melampsora larici-populina, and cross-amplification in related species

Benoît Barres , Christian Cyril Dutech , Axelle Andrieux , Henri Caron , Jean Pinon
Molecular Ecology Notes, 2005, 6 (1), pp.60-64. ⟨10.1111/j.1471-8286.2005.01137.x⟩
Journal articles hal-01005053v1
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Poplar peroxiredoxin Q. A thioredoxin-linked chloroplast antioxidant functional in pathogen defense

Nicolas Rouhier , Éric Gelhaye , J.M. Gualberto , M.N. Jordy , E. de Fay
Plant Physiology, 2004, 134 (3), pp.1027-1036
Journal articles hal-02680157v1
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La rouille du peuplier : un pathosystème modèle

Pascal Frey , Jean Pinon
Biofutur, 2004, 247, pp.28-32
Journal articles hal-02681634v1

First report of Melampsora larici-populina on Populus spp. in Eastern North America.

L. Innes , L. Marchand , Pascal Frey , M. Bourassa , C. Hamelin
Plant Disease, 2004, 88 (1), pp.85
Journal articles hal-02677519v1

Partial Resistance to Melampsora larici-populina Leaf Rust in Hybrid Poplars: Genetic Variability in Inoculated Excised Leaf Disk Bioassay and Relationship with Complete Resistance.

Arnaud A. Dowkiw , Claude Husson , Pascal Frey , Jean Pinon , Catherine Bastien
Phytopathology, 2003, 93 (4), pp.421-427
Journal articles hal-02677644v1
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Végétation accompagnatrice et agresseurs biotiques

L.M. Nageleisen , Jean Pinon , Pascal Frey , Benoit Marçais , Henri Frochot
Revue forestière française, 2002, 54, pp.577-584
Journal articles hal-02673581v1
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Végétation accompagnatrice et agresseurs biotiques.

Louis-Michel Nageleisen , Jean Pinon , Pascal Frey , Henri Frochot , François Ningre
Revue forestière française, 2002, 54 (6), pp.577-684. ⟨10.4267/2042/4945⟩
Journal articles hal-03449223v1

La populiculture à la recherche de la résistance durable aux maladies

Jean Pinon , Pascal Frey , Marc Villar
La Forêt Privée - revue forestière européenne, 2001, 258, pp.25-32
Journal articles hal-02672906v1

Genomic variation within Monilinia laxa, M. fructigena and M. fructicola, and application to species identification by PCR

Renaud Ioos , Pascal Frey
European Journal of Plant Pathology, 2000, 106, pp.373-378. ⟨10.1023/A:1008798520882⟩
Journal articles hal-02695403v1
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The hrpB and hrpG regulatory genes of Ralstonia solanacearum are required for different stages of the tomato root infection process

Jacques Vasse , Stéphane Genin , Pascal Frey , C. Boucher , B. Brito
Molecular Plant-Microbe Interactions, 2000, 13 (3), pp.259-267
Journal articles hal-02698404v1
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Varietal mixture of poplar clones: effects on infection by Melampsora larici-populina and on plant growth

S. Miot , Pascal Frey , Jean Pinon
European Journal of Forest Pathology, 1999, 29, pp.411-423
Journal articles hal-02691618v1

Poplar rust (Melampsora larici-populina): the development of E4 pathotypes in France since 1994

Jean Pinon , Pascal Frey , C. Husson , Arlette Schipfer
Research Papers - Finnish Forest Research Institute, 1998, 712, pp.57-64
Journal articles hal-02683949v1
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Variability in pathogenicity of Melampsora allii-populina expressed on poplar cultivars

Pascal Frey , Jean Pinon
European Journal of Forest Pathology, 1997, 27, pp.397-407
Journal articles hal-02690690v1

Structure of Melampsora larici-populina populations on wild and cultivated poplar

Jean Pinon , Pascal Frey
European Journal of Plant Pathology, 1997, 103, pp.159-173. ⟨10.1023/A:1008650128568⟩
Journal articles hal-02696112v1

Recrudescence de la rouille du peuplier à Melampsora larici-populina, en 1997

Jean Pinon , Pascal Frey
Forêt Entreprise, 1997, 118, pp.58-64
Journal articles hal-02686496v1
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Metabolic and genotypic fingerprinting of fluorescent Pseudomonads associated with the douglas fir-Laccaria bicolor mycorrhizosphere

Pascal Frey , Pascale Frey-Klett , Jean Garbaye , Odile Berge , T. Heulin
Applied and Environmental Microbiology, 1997, 63 (5), pp.1852-1860
Journal articles hal-02695301v1
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Bacteriocin typing of Burkholderia (Pseudomonas) solanacearum race 1 of the French West Indies and correlation with genomic variation of the pathogen

Pascal Frey , J.J. Smith , Laurence Albar , Philippe Prior , G.S. Saddler
Applied and Environmental Microbiology, 1996, 62 (2), pp.473-479
Journal articles hal-02689573v1
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Microscopic studies of intercellular infection and protoxylem invasion of tomato roots by Pseudomonas solanacearum

Jacques Vasse , Pascal Frey , André Trigalet
Molecular Plant-Microbe Interactions, 1995, 8 (2), pp.241-251
Journal articles hal-02714636v1
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Hrp - Mutants of Pseudomonas solanacearum as potential biocontrol agents of tomato bacterial wilt

Pascal Frey , Philippe Prior , C. Marie , Alain Kotoujansky , D. Trigalet-Demery
Applied and Environmental Microbiology, 1994, 60 (9), pp.3175-3181
Journal articles hal-02709496v1

The Durance River valley: a great ecological system to study dispersal

Fabien Halkett , Méline Saubin , Xhaard Constance , Becheler Ronan , Stoeckel Solenn
Journée thématique du LabEx ARBRE "Maladies forestières et changements globaux", Mireia Gomez-Gallego, Jun 2023, Champenoux, France, France
Conference papers hal-04125869v1
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Poplar rust dispersal along the Durance River valley: inference of dispersal kernel and consequences

Frédéric Fabre , Méline Saubin , Jérôme Coville , Constance Xhaard , Pascal Frey
Workshop on Evolutionary Dynamical Systems and Applications (EDySA) and Training on Mathematics and Modeling, Nov 2023, Thiès, Senegal
Conference papers hal-04428063v1

Une mutation ponctuelle et une large délétion au locus candidat d’avirulence AvrMlp7 chez la rouille du peuplier sont corrélés avec le contournement de la résistance RMlp7 exprimée par le peuplier

Clémentine Louet , Méline Saubin , Axelle Andrieux , Antoine Persoons , Mathilde Gorse
Journées Jean Chevaugeon, 13èmes Rencontres de Phytopathologie - Mycologie, Sep 2022, Aussois, France
Conference papers hal-04137634v1

Genetic signatures of a range expansion in natura: how clones play leapfrog?

Méline Saubin , Ronan Becheler , Jérôme Coville , Lucie Develay , Bénédicte Fabre
Congress of the European Society for Evolutionary Biology, Lukáš Kratochvíl, Aug 2022, Prague, Czech Republic
Conference papers hal-04137682v1

Association of two co-occurring mutations at the AvrMlp7 avirulence locus in poplar rust during the breakdown of RMlp7 resistance gene

Louet C , Méline Saubin , Axelle Andrieux , A. Persoons , Gorce M
Molecular Mechanism & Structure— Zooming in on Plant Immunity, Jul 2021, e-symposia, Germany
Conference papers hal-03588311v1

From population genomics to molecular approaches to identify and analyse the first avirulence gene in the poplar rust fungus Melampsora larici-populina

Clémentine Louet , Méline Saubin , Antoine Persoons , Axelle Andrieux , Bénédicte Fabre
Réunion 2020 du groupe "champignons phytopathogènes", Nov 2020, aucune (visio), France
Conference papers hal-03336539v1
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Quel avenir pour les principales essences forestières de la ripisylve? Etats des lieux et prospectives

Marc Villar , Richard Chevalier , Aurore Desgroux , Arnaud Dowkiw , André Evette
Séminaire "Comment améliorer la gestion de nos ripisylves ?", Oct 2020, Orléans, France
Conference papers hal-03286970v1

Impact of the light on poplar rust infection

Bénédicte Fabre , Fabien Halkett , Pascal Frey
Workshop PathoLED: light sources & plant pathology test outcomes, May 2019, Angers (FR), France
Conference papers hal-04137334v1

Towards evolutionary and functional characterization of an avirulence gene in the poplar rust fungus

Pascal Frey , Clémentine Louet , Agathe Maupetit , Méline Saubin , Antoine Persoons
IUFRO Joint Conference: Genetics of Five-Needle Pines & Rusts of Forest Trees, Jul 2019, Invermere, United States
Conference papers hal-04137412v1

Towards evolutionary and functional characterization of an avirulence gene in the poplar rust fungus

Pascal Frey , Clémentine Louet , Agathe Maupetit , Méline Saubin , Fabien Halkett
3rd Wild Plant Pathosystems Conference, Marco Thines, Sep 2019, Frankfurt,, Germany
Conference papers hal-04137365v1

Optimal infection dynamics in spore producing pathogens: reconciling theory with experiment for the study of host-parasite interactions

Fabien Halkett , Ivan Yegorov , Frédéric Fabre , Virginie Ravigné , Pascal Frey
3rd Wild Plant Pathosystems Conference, Sep 2019, Frankfurt, Germany
Conference papers hal-03336458v1

From mutation to population extinction: The butterfly effect of resistance breakdown in the poplar rust fungus Melampsora larici- populina

Antoine Persoons , Fabien Halkett , Sébastien Duplessis , Pascal Frey , Stéphane de Mita
XVIII International Congress on Molecular Plant-Microbe Interactions (IS-MPMI), Jul 2019, Glasgow, United Kingdom. pp.S1.1-S1.243
Conference papers hal-04137226v1

First avirulence gene in the poplar rust fungus Melampsora larici-populina, from genetic characterization to functional validation

Clémentine Louet , Méline Saubin , Antoine Persoons , Agathe Maupetit , Stéphane de Mita
12th Effectome Meeting, Oct 2019, Lauret, France
Conference papers hal-04137237v1

Evolutionary potential of aggressiveness related traits in the poplar rust fungus, Melampsora larici-populina

Agathe Maupetit , Katherine Hayden , Pascal Frey , Stéphane de Mita , Fabien Halkett
12. Rencontres de Phytopathologie - Mycologie - JJC 2018 Journée Jean Chevaugeon, Jan 2018, Aussois, France
Conference papers hal-03336266v1

Evolutionary potential of aggressiveness traits in the poplar rust fungus, Melampsora larici-populina

Agathe Maupetit , Antoine Persoons , Katherine Hayden , Vincent Segura , Thomas Coudoux
II Joint Congress on Evolutionary Biology, Aug 2018, Montpellier, France
Conference papers hal-04137309v1

Demographic and genomic consequences of a major selective event in the poplar rust

Fabien Halkett , Antoine Persoons , Agathe Maupetit , Sébastien Duplessis , Pascal Frey
International Conference on Population Genomics of Fungal and Oomycete Diseases of Animals and Plants, May 2017, Ascona, Switzerland
Conference papers hal-02790211v1
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Conséquences génomiques de l’adaptation à l’hôte chez l’agent de la rouille du peuplier

Agathe Maupetit , Antoine Persoons , Vincent Segura , Thomas Coudoux , Pascal Frey
38. colloque Le Petit Pois Déridé, réunion du Groupe de Génétique et Biologie des Populations, Jun 2017, Saclay, France. 1 p
Conference papers hal-02788070v1
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Emergence de maladies sur peupliers ou la course aux armements entre l’améliorateur et les maladies

Pascal Frey , Katherine Hayden , Fabien Halkett
Regefor Atelier Recherche et Gestion Forestières. Emergence de bioagresseurs en forêt : Comment identifier et atténuer les risques ?, Jun 2017, Champenoux, France
Conference papers hal-02791243v1

Genome-wide QTL mapping of aggressiveness traits in the poplar rust fungus

Michaël Pernaci , Agathe Maupetit , Stéphane de Mita , Bénédicte Fabre , Sébastien Duplessis
International Conference on Population Genomics of Fungal and Oomycete Diseases of Animals and Plants, May 2017, Monte Verità Conference Center, Ascona, Switzerland
Conference papers hal-02785090v1
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When a plant pathogen runs down a river

Pascal Frey , Constance Xhaard , Michaël Pernaci , Ronan Becheler , Katherine Hayden
12. European Foundation for Plant Pathology (EFPP) ; 10. French Society for Plant Pathology (SFP) Conference, May 2017, Dunkerque Malo-les-Bains, France
Conference papers hal-02788429v1

Update on Melampsora larici-populina genomics

Sébastien Duplessis , Stéphane de Mita , Fabien Halkett , Pascal Frey
11. Rencontres de Phytopathologie - Mycologie - JJC 2016 Journée Jean Chevaugeon, Jan 2016, Aussois, France
Conference papers hal-02741208v1

Adaptation of poplar rust to the poplar varietal landscape

Katherine Hayden , Bénédicte Fabre , Fabien Halkett , Pascal Frey
11. Rencontres de Phytopathologie - Mycologie - JJC 2016 Journée Jean Chevaugeon, Jan 2016, Aussois, France
Conference papers hal-01604529v1

Mapping QTL of aggressiveness traits in the poplar rust fungus

Michaël Pernaci , Stéphane de Mita , Bénédicte Fabre , Sébastien Duplessis , Fabien Halkett
5. International Conference on Genetics of Tree-Parasite Interactions : Novel challenges and opportunities for resistance to pests and pathogens, Aug 2015, Orléans, France
Conference papers hal-02793206v1

Mapping QTL of aggressiveness traits in the poplar rust fungus

Michaël Pernaci , Stéphane de Mita , Bénédicte Fabre , Sébastien Duplessis , Fabien Halkett
9eme Colloque de la Société Française de Phytopathologie, Jun 2015, Colmar, France
Conference papers hal-02792933v1

Quantitative trait evolution within a qualitative resistance breakdown

Katherine Hayden , Bénédicte Fabre , Jeremy Petrowski , Fabien Halkett , Pascal Frey
5. International Conference on Genetics of Tree-Parasite Interactions: Novel challenges and opportunities for resistance to pests and pathogens, Aug 2015, Orléans, France
Conference papers hal-02794919v1

On the road to mapping QTLs of morphological and aggressiveness traits in the poplar rust fungus

Michaël Pernaci , Stéphane de Mita , Bénédicte Fabre , Sébastien Duplessis , Fabien Halkett
Réunion annuelle 2015 du Réseau Ecologie des Interactions Durables, Mar 2015, Lyon, France
Conference papers hal-02792666v1

Pathogen adaptation to a shifting host landscape

Katherine Hayden , Bénédicte Fabre , Jeremy Petrowski , Fabien Halkett , Pascal Frey
Max-Planck-ARBRE inter-departmental workshop on plant-fungus interactions, Max Planck Institute for Terrestrial Microbiology. DEU., Nov 2014, Nancy, France
Conference papers hal-02800432v1

Adaptation de la rouille du peuplier au paysage variétal populicole en France

Katherine Hayden , Constance Xhaard , Bénédicte Fabre , Fabien Halkett , Pascal Frey
14. Rencontres du Groupe Français de Pathologie Forestière, Oct 2014, Hendaye, France
Conference papers hal-01606751v1

Patterns of genomic variation in the poplar rust fungus Melampsora larici-populina identify pathogenesis-related factors

Antoine Persoons , Emmanuelle Morin , Christine Delaruelle , Thibaut Payen , Fabien Halkett
Max-Planck-ARBRE inter-departmental workshop on plant-fungus interactions, Nov 2014, Nancy, France
Conference papers hal-02794927v1
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Étude du déterminisme génétique des traits de vie qualitatifs et quantitatifs de Melampsora larici-populina, agent de la rouille foliaire du peuplier

Michaël Pernaci , Stéphane de Mita , Bénédicte Fabre , Axelle Andrieux , Fabien Halkett
10. Rencontres de Phytopathologie - Mycologie - JJC 2014 Journée Jean Chevaugeon, Jan 2014, Aussois, France
Conference papers hal-02800971v1

Adaptation of poplar rust to the poplar varietal landscape

Katherine Hayden , Constance Xhaard , Bénédicte Fabre , Fabien Halkett , Pascal Frey
IUFRO Joint Meeting on Genetics of Five-Needle Pines and Rusts in Mountain Landscapes, Jun 2014, Fort Collins, United States
Conference papers hal-02792367v1

On the road to mapping QTLs of morphological and aggressiveness traits in the poplar rust fungus

Michaël Pernaci , Stéphane de Mita , Bénédicte Fabre , Axelle Andrieux , Fabien Halkett
IUFRO Joint Meeting on Genetics of Five-Needle Pines and Rusts in Mountain Landscapes, Jun 2014, Fort Collins, United States
Conference papers hal-02792679v1

Genomics, transcriptomics and effectoromics of the poplar leaf rust fungus Melampsora larici-populina

Benjamin Petre , Stéphane S. Hacquard , Antoine Persoons , Emilie Tisserant , Emmanuelle Morin
IUFRO Joint Meeting on Genetics of Five-Needle Pines and Rusts in Mountain Landscapes, Jun 2014, Fort Collins, United States
Conference papers hal-02801804v1
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Genome-wide signature of adaptation in a recently introduced pathogen

N. Feau , Pascal Frey , Sébastien Duplessis , R. C. Hamelin
APS-MSA Joint Meeting, Aug 2013, Austin, Texas, United States
Conference papers hal-01268359v1
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Inférence des processus épidémiques chez la rouille du peuplier dans la vallée de la Durance

Constance Xhaard , Frédéric Fabre , Jérôme Coville , Pascal Frey , Samuel Soubeyrand
34. Réunion annuelle du Groupe d’Etude de Biologie et Génétique des Populations (Petit Pois Déridé 2012), Aug 2012, Avignon, France
Conference papers hal-01267867v1

Un cadre théorique pour étudier les interactions plantes - champignons pathogènes foliaires

Fabien Halkett , Audrey Andanson , Bénédicte Fabre , Elisabeth E. Fournier , Pascal Frey
8. Congrès national de la Société Française de Phytopathologie, Jun 2012, Paris, France. p.54
Conference papers hal-02802411v1

Predicting invasion success in forest pathogenic fungi from species traits?

Marie Laure Desprez Loustau , Pascal Frey , Fabien Halkett , Claude Husson , Brigitte Lung
Conference Jacques Monod on ‘New and Emerging Fungal Diseases of Animals and Plants”, Jun 2011, Roscoff, France
Conference papers hal-01173287v1

Les apports de la génomique pour l’étude des familles multigéniques : exemple des thaumatin-like proteins (TLPs) chez le peuplier

Benjamin Petre , Ian Major , Pascal Frey , Francis Martin , Nicolas Rouhier
Séminaire de l’Ecole Doctorale RP2E. Biodiversité, Ingénierie écologique, Jan 2011, Vandoeuvre-lès-Nancy, France. 8 p
Conference papers hal-02746248v1
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Breeding poplars with durable resistance to Melampsora larici-populina leaf rust : a multidisciplinary approach to understand and delay pathogen adaptation

Arnaud A. Dowkiw , Catherine Bastien , Véronique V. Jorge , Marc M. Villar , Elodie Voisin
4. International Workshop on the Genetics of Host-Parasite Interactions in Forestry : "Disease and Insect Resistance in Forest Trees", United States Department of Agriculture - USDA (USA) (USDA). Forest service, Ville service, USA., Jul 2011, Eugene, Oregon, United States. 112 p
Conference papers hal-02748005v1

Un cadre théorique pour étudier les interactions plantes-champignons pathogènes foliaires

Virginie Ravigné , Audrey Andanson , Bénédicte Fabre , Pascal Frey , Elisabeth Fournier
Premier Colloque National d'Ecologie Scientifique, 2010, Montpellier, France
Conference papers hal-00853204v1
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No resistance is sacrosanct: unveiling the genes controlling quantitative resistance to Melampsora larici-populina in interspecific hybrid poplars and quantifying potential adaptation of the pathogen

Arnaud A. Dowkiw , Véronique V. Jorge , Elodie Voisin , Patricia P. Faivre-Rampant , Alois Bresson
4. International Rusts of Forest Trees Conference. IUFRO Working Party 02.07.05, May 2010, Florence, Italy
Conference papers hal-02754692v1
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Towards broad-spectrum resistance to Melampsora larici-populina rust in poplar: new genetic constructions and potential adaptation of the pathogen

Catherine Bastien , Arnaud A. Dowkiw , Véronique V. Jorge , Elodie Voisin , Vanina Guérin
5. International Poplar Symposium;IPS V, Sep 2010, Orvieto, Italy
Conference papers hal-02753480v1

Joint transcriptomic and proteomic approaches to precise the molecular basis of a major QTL (RUS) controlling quantitative rust resistance in poplar

Véronique V. Jorge , Sébastien Duplessis , Céline C. Lalanne , Alois Bresson , Arnaud A. Dowkiw
Plant genomics and beyond, Jul 2009, Evry, France
Conference papers hal-02756173v1

Molecular characterisation of a major QTL for rust resistance in poplar using a proteomic approach

Céline C. Lalanne , Catherine Bastien , Pascal Frey , Arnaud A. Dowkiw , Véronique V. Jorge
IUFRO - Tree Biotechnology, Jun 2007, Ponta Delgada, Azores, Portugal
Conference papers hal-02754112v1

Clonalité et diversité génétique hiérarchique de Melampsora larici-populina, agent de la rouille foliaire du peuplier

Benoît Barres , Axelle Andrieux , Christian Cyril Dutech , Jean Pinon , Pascal Frey
Journées Jean Chevaugeon. 6e Rencontres de Phytopathologie - Mycologie, Jan 2006, Aussois, France. 1 p
Conference papers hal-02824723v1

Remise en cause du potentiel du durabilité des résistances quantitatives à Melampsora larici-populina chez le peuplier hybride interamericain

Arnaud A. Dowkiw , Véronique V. Jorge , Patricia P. Faivre-Rampant , Pascal Frey , Jean Pinon
6. Rencontres de Phytopathologie / Mycologie de la Société Française de Phytopathologie, Jan 2006, Aussois, France
Conference papers hal-02756731v1

Characterization of the early response of poplar to rust infection using expression profiling

Sébastien Duplessis , Annegret Kohler , Cécile Rinaldi , Pascal Frey , Francis Martin
12. New Phytologist Symposium. Functional genomics of environmental adaptation in Populus, Oct 2004, Gatlinburg, United States. 1 p
Conference papers hal-02830800v1

Développement de marqueurs microsatellites chez Melampsora larici-populina

Benoît Barres , Christian Cyril Dutech , Axelle Andrieux , Jean Pinon , Pascal Frey
Journées Jean Chevaugeon : 5. Rencontres de Phytopathologie, Jan 2004, Aussois, France. 1 p
Conference papers hal-02831693v1

Molecular studies of the poplar rust Melampsora Medusae-Populina, an interspecific hybrid between M.Larici-Populina and M.Medusae

Pascal Frey , M. Gatineau , F. Martin , J. Pinon
International Poplar Symposium II, Sep 1999, Orléans (45), France. pp.34
Conference papers hal-04649153v1

Poplar rust (Melampsora larici-populina): the development of E4 pathotypes in France since 1994

Jean Pinon , Pascal Frey , C. Husson , Arlette Schipfer
Rusts of Forest Trees, Aug 1998, Saariselkä, Finland
Conference papers hal-02835859v1

Caractérisation génétique et moléculaire de gènes de résistance aux rouilles chez les peupliers

Marc Villar , Patricia Faivre-Rampant , Pascal Frey , M.C. Goué-Mourier , Daniel Lacan
Réunion AIP, Mar 1997, L'Isle sur la Sorgue, France
Conference papers hal-02769999v1

One cluster of genes governs qualitative resistance of four rust races in poplar

S. Miot , Patricia Faivre-Rampant , Pascal Frey , Francois Lefèvre , M.C. Lesage
5. Plant and animal genome, Jan 1997, San Diego, United States
Conference papers hal-02766829v1

Etude de la compétition in planta entre un mutant Hrp- et une souche pathogène de Pseudomonas solanacearum

C. Etchebar , D. Trigalet-Demery , Pascal Frey , Jacques Vasse , André Trigalet
2. Rencontres de phytobactériologie, Feb 1996, Aussois, France
Conference papers hal-02769167v1

Répartition géographique et variabilité d'une nouvelle race de Melampsora larici-populina, agent de la rouille du peuplier

Pascal Frey , Jean Pinon
4. Congrès, Nov 1996, Nice, France
Conference papers hal-02765464v1

Diversité phénotypique et génotypique des Pseudomonas fluorescens associés à la mycorhizosphère du Douglas

Pascal Frey , Pascale Klett , Jean Garbaye , Odile Berge , T. Heulin
2. Rencontres de phytobactériologie, Feb 1996, Aussois, France
Conference papers hal-02771727v1

Caractérisation génétique et moléculaire de gènes de résistance aux rouilles chez les peupliers

Francois Lefèvre , Patricia Faivre-Rampant , Pascal Frey , M.C. Goue , Françoise Laurans
AIP, Nov 1995, Seillac, France
Conference papers hal-02777636v1

Lutte biologique contre le flétrissement bactérien des solanacées à l'aide de mutants avirulents de Pseudomonas solanacearum

Pascal Frey , D. Prior , D. Trigalet-Demery , C. Marie , Alain Kotoujansky
3. congrès de la Société Française de Phytopathologie. Réunion du groupe d'écologie microbienne de la Société Française de Microbiologie, Dec 1993, Dijon, France
Conference papers hal-02774690v1

Biological control of tomato bacterial wilt using HRP mutants of Pseudomonas solanacearum

Pascal Frey , Philippe Prior , D. Trigalet-Demery , André Trigalet
6. International congress of plant pathology, Jul 1993, Montréal, Canada
Conference papers hal-02774048v1

Advances in biological control to tomato bacterial wilt using genetically engineered avirulent mutants of Pseudomonas solanacearum

Pascal Frey , Philippe Prior , D. Trigalet-Demery , C. Marie , Alain Kotoujansky
8. International conference, Jun 1992, Versailles, France
Conference papers hal-02776664v1

Hrp mutants of Pseudomonas solanacearum for the biological control of tomato bacterial wilt