Patricia Faivre Rampant
- Etude du Polymorphisme des Génomes Végétaux (EPGV)
Publications
Publications
The genome of G. fossarum: a genomic toolkit to investigate endocrine and metabolic disruption in amphipod sentinel speciesColloque INRAE Genomics, Jun 2025, Clermon-Ferrand, France |
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The genome of G. fossarum: a genomic toolkit to investigate endocrine and metabolic disruption in amphipod sentinel species20th International Conference on Amphipoda, Sep 2025, Lodz, Poland |
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Resilience of genetic diversity in forest trees over the Quaternary26th IUFRO World Congress, IUFRO, Jun 2024, Stockholm, Sweden |
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Between and within species diversity of water use efficiency for Q. petraea and Q. robur : At the crossroad of ecology, ecophysiology and geneticsINUPRAG Symposium on Integrative Plant Biology, Umea Plant Science Centre Suede, Feb 2023, Umea, Sweden |
Evolution des technologies de séquençage et génotypageséminaire INRAE, Nov 2022, Orléans (45), France |
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Analyse de réseaux plante-pollinisateurs pour évaluer la pollinisation des prairies dans trois zones agricoles françaises contrastéesGDR Pollineco, Mar 2019, Montpellier, France |
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Survey of genetic diversity in European Populus breeding programsINUPRAG Meeting 2018, Jun 2018, Barcelone, Spain |
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An integrated information system dedicated to oak genomics and geneticsPAG XXVI Plant and Animal Genome Conference, Jan 2018, San Diego, United States. pp.27 slides |
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Genetic mapping of resistance factors to Melamspora sp in Populus sp: a reviewSéminaire interne de l'Université d'Helsinki, Apr 2018, Helsinki, Finland |
Genetic architecture of water use efficiency across two oak species and their hybridsWorkshop on Fagaceae and Nothofagaceae genetics and genomics, Nov 2017, Shanghai, China |
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Napoleonian legacy in Populus nigra populationsIUFRO Genomics and Forest Tree Genetics, May 2016, Arcachon, France |
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A new Genomic resource for Populus nigra and its deployment for genetic studiesIUFRO Genomics and Forest Tree Genetics, May 2016, Arcachon, France |
Oak genome sequencing and evolutionGenomics and Forest Tree Genetics Conference, Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., May 2016, Arcachon, France. 134 p |
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Annotation of the oak genome sequence and associated bioinformatic resourcesIUFRO Genomics and Forest Tree Genetics, Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., May 2016, Arcachon, France. 134 p |
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Intérêts d’approches génomiques complémentaires pour l’analyse de la diversité génétique fonctionnelle de populations naturelles de Peuplier NoirColloque EPGV 2014 "Détection, Gestion et Analyse du Polymorphisme des Génomes Végétaux", Jun 2014, Evry, France. 17 p |
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New genomic tools to enhance discovery of functional diversity in natural populations of Populus nigra L.Forest Tree Breeding Conference. IUFRO 2014, Aug 2014, Prague, Czech Republic |
Sequencing allelic BACs for exploring the level of genome heterozygosity in oakIUFRO working group "Genetics of Quercus and Nothofagus", Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., Oct 2012, Bordeaux, France. 1 p |
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Development of genomic resources to study the structure, function and evolution of the oak genomeIUFRO working group "Genetics of Quercus and Nothofagus", Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., Oct 2012, Bordeaux, France. 1 p |
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Diversité moléculaire de la région chromosomique contrôlant la résistance à la rouille foliaire dans les collections de peupliersColloque FRB : Les Ressources Génétiques (RG) face aux nouveaux enjeux environnementaux, économiques et sociétaux, Sep 2011, Montpellier, France. 84 p |
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Genome-wide structural variation in poplar19. Conference on Plant & Animal Genomes (PAG), Jan 2011, San Diego, California, United States. 1 p |
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Le Peuplier noir (Populus nigra L.) espèce adaptée aux changements climatiques en Loire ?Séminaire ZAL/CNRS/CITERES : La biodiversité du bassin versant de la Loire. Facteurs déterminants et interactions, LTER Zone Atelier Loire. FRA., Jun 2011, Tours, France |
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Breeding poplars with durable resistance to Melampsora larici-populina leaf rust : a multidisciplinary approach to understand and delay pathogen adaptation4. International Workshop on the Genetics of Host-Parasite Interactions in Forestry : "Disease and Insect Resistance in Forest Trees", United States Department of Agriculture - USDA (USA) (USDA). Forest service, Ville service, USA., Jul 2011, Eugene, Oregon, United States. 112 p |
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Sequence and polymorphism map of the populus Nigra genome from A de novo assembly approach19. Conference on Plant & Animal Genomes (PAG), Jan 2011, San Diego, California, United States. 1 p |
Development of a bac library and bac end sequencing for pedunculate oak (Quercus robur L.) : new tools for oak genome studiesConference on Forest Ecosystem Genomics and Adaptation, Jun 2010, Madrid, Spain |
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Comparative mapping in Salicaceae: a tool for identifying important genes controlling adaptive traitsForest ecosystem genomics and adaptation, Jun 2010, San Lorenzo de El Escorial, Spain |
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Next-generation sequencing as source of SNP and structural variants information to improve breeding programs in Populus nigra5. International Poplar Symposium;IPS V, Sep 2010, Orvieto, Italy |
Exploiting next-generation sequencing to obtain a whole-genome SNP collection in black poplar (Populus nigra L.)Forest ecosystem genomics and adaptation, Jun 2010, San Lorenzo de El Escorial, Spain |
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Towards broad-spectrum resistance to Melampsora larici-populina rust in poplar: new genetic constructions and potential adaptation of the pathogen5. International Poplar Symposium;IPS V, Sep 2010, Orvieto, Italy |
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No resistance is sacrosanct: unveiling the genes controlling quantitative resistance to Melampsora larici-populina in interspecific hybrid poplars and quantifying potential adaptation of the pathogen4. International Rusts of Forest Trees Conference. IUFRO Working Party 02.07.05, May 2010, Florence, Italy |
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Linking nucleotide polymorphisms in candidate genes and quantitative resistance to Melampsora larici-populina Kleb. in Populus nigra L.4. International Rusts of Forest Trees Conference. IUFRO Working Party 02.07.05, May 2010, Florence, Italy |
Joint transcriptomic and proteomic approaches to precise the molecular basis of a major QTL (RUS) controlling quantitative rust resistance in poplarPlant genomics and beyond, Jul 2009, Evry, France |
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Genetic and physical mapping of RUS, a major QTL controlling rust resistance in poplarPlant genomics and beyond, Jul 2009, Evry, France |
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An integrated genetic and physical map of chromosome XIX in poplar2009 IUFRO Tree Biotechnology Conference, Jun 2009, Whistler, BC, Canada |
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Development of genomic resources in oak to study the structure, variability, evolution and functioning of its genomeInternational Plant & Animal genomes XV Conferences, Jan 2007, San Diego, United States |
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Molecular characterisation of a major QTL for rust resistance in poplar using a proteomic approachIUFRO - Tree Biotechnology, Jun 2007, Ponta Delgada, Azores, Portugal |
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Development of genomic resources in oak to study the structure, variability, evolution and functioning of its genomeTree Biotechnology 2007, Jun 2007, Ponta Delgada, Portugal. 33p |
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Remise en cause du potentiel du durabilité des résistances quantitatives à Melampsora larici-populina chez le peuplier hybride interamericain6. Rencontres de Phytopathologie / Mycologie de la Société Française de Phytopathologie, Jan 2006, Aussois, France |
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Association mapping of resistance to rust disease in poplarPopulation genetics and genomics of forest trees : from gene function to evolutionary dynamics and conservation; A joint conference of IUFRO working groups 2.04.01 (population, ecological and conservation genetics) and 2.04.10 (genomics), and COST Action E-28 (genosilva : european forest genomics network), Oct 2006, Madrid, Spain |
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Linkage mapping and QTL analysis for growth of young Pseudotsuga menziesii plantsSustainable Forestry, Wood products and Biotechnology, BIOFOR 02, Nov 2002, Vitoria-Gasteiz, Spain |
Molecular dissection of quantitative traits in larchInternational Symposium : Improvement of larch (larix sp.) for better growth, stem form and wood quality, Sep 2002, Gap, France |
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Characterization of hybrids between Larix Decidua and L. Kaempferi by molecular markersInternational Symposium : Improvement of larch (larix sp.) for better growth, stem form and wood quality, Sep 2002, Gap, France |
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Caractérisation génétique et moléculaire de gènes de résistance aux rouilles chez les peupliersRéunion AIP, Mar 1997, L'Isle sur la Sorgue, France |
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One cluster of genes governs qualitative resistance of four rust races in poplar5. Plant and animal genome, Jan 1997, San Diego, United States |
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Comment surmonter les difficultés des espèces forestières pour la recherche de QTLRencontres de m2ribel 1997, 1997, Versailles, France |
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Analysis of a factorial mating design for the detection of relationships between quantitative traits and RAPD markers in larchSRIEG Workshop, Jun 1996, Houston, United States |
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Molecular and genetic approaches to rust resistance (Melampsora sp.) in poplar (Populus sp.)IUFRO Working PartiesSomatic Cell Genetics S2.04-07. Molecular Genetics S2.04-06, Sep 1995, Gent, Belgium |
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Quantitative traits and genetic markers: analysis of a factorial mating design in larchIUFRO Working PartiesSomatic Cell Genetics S2.04-07. Molecular Genetics S2.04-06, Sep 1995, Gent, Belgium |
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Detection of disease resistance genes by the use of mating designs in poplars and wild cherrySRIEG Workshop, Jun 1996, Houston, United States |
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Molecular genetics of rust resistance in a factorial mating design involving Populus trichocarpa and P. deltoidesInternational poplar symposium, Aug 1995, Seattle, United States |
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Caractérisation génétique et moléculaire de gènes de résistance aux rouilles chez les peupliersAIP, Nov 1995, Seillac, France |
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Composantes de la résistance aux rouilles chez les peupliers : utilisation en sélectionColloque, Mar 1995, Paris, France |
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Molecular approaches to the study of poplar systematicsInternational poplar symposium, Aug 1995, Seattle, United States |
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Genetic diversity of European black poplar, Populus nigra L., in France and the role of vegetative reproduction in natural standsInternational poplar symposium, Aug 1995, Seattle, United States |
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Quantitative traits and genetic markers : analysis of a factorial mating design in larchJoint meeting of the IUFRO International Union of Forestry Research Organizations, Sep 1995, Gent, Belgium |
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Fluorescence in situ hybridization detects a variable number of ribosomal DNA loci in poplar speciesInternational conference on the status of plant genome research, Jan 1995, San Diego, United States |
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Molecular genetics of rust resistance in a factorial mating design involving Populus trichocarpa and P. deltoidesJoint meeting of the IUFRO International Union of Forestry Research Organizations, Sep 1995, Gent, Belgium |
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Etude du déterminisme génétique de l'incompatibilité race-spécifique du peuplier aux rouilles à MelampsoraRéunion du groupe de travail Marqueurs moléculaires chez les végétaux, Mar 1995, Méribel, France |
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Construction d'une carte genetique chez le peuplier : marquage et localisation des genes de resistance a Melampsora sp.Groupe de travail Marqueurs Moleculaires chez les Vegetaux, Mar 1993, Meribel, France |
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Genetic study of poplar resistance to rusts : first results from an intra and interspecific mating design.Convegno Internazionale, May 1993, Viterbo, Italy |
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RDNA variation in 10 Populus species.Convegno Internazionale, May 1993, Viterbo, Italy |
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Conservation des ressources genetiques de Populus nigraColloque international, Jan 1992, Paris, France |
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Relations phylogenetiques etablies sur la base de marqueurs moleculaires : modeles de la betterave et du peuplierMeribel 91. Seminaire du Departement de Genetique et d'Amelioration des Plantes, Mar 1991, Meribel, France |
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Intra-specific NLR allelic diversity and genomic landscape for plant resistance association studies2025 |
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Synchronous effective population size changes and genetic stability of forest trees through glacial cycles2023 |
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Nanopore adaptive sampling to identify the NLR-gene family in melon (Cucumis melo L.)2024 |
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Deciphering the genetic architecture of plant-pathogen interactions using co-GWASJournées Jeunes Chercheurs du département BAP 2025, May 2025, Bordeaux, France |
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Un an de MGI à l'EPGVAG France Génomique, Jun 2024, Evry courcouronnes, France |
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Pipeline for Haplotype Frequencies Estimation from Pooled Targeted Sequencing in MaizeAG France Génomique, Jun 2024, Evry courcouronnes, France. 2013, ⟨10.1093/molbev/mst016⟩ |
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A chromosome-level assembly of lavender ‘Maillette’ using long-reads and a newly generated linkage mapPAG XXI. Plant and Animal Genome Conference, Jan 2024, San Diego (California), United States. ⟨10.1371/journal.pone.0243853⟩ |
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Estimation of Haplotype Frequencies from Pooled Targeted Sequencing in Maize Landraces2ème carrefour de la sélection maïs, May 2024, Saclay, France. 2013, ⟨10.1093/molbev/mst016⟩ |
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Feedback on tGBS with Allegro : Does it hit the target ?PAG XXX. Plant and Animal Genome, Jan 2023, San Diego (California), United States. , ⟨10.15454/4NYHD6⟩ |
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Long Reads for Long-Term Goals : A Genome Resource for Lavander Genetic ImprovementPAG XXX Plant and Animal Genome Conference, Jan 2023, San Diego (California), United States |
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Short reads et trios, un duo gagnant pour l'identification de variations structurales chez le peuplier noirMini congrès, Jun 2022, Evry, France |
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La fibre génomique du Lin30ème édition du Festival du Lin et de la Fibre Artistique, Jul 2022, Saint-Pierre-Le-Viger, France. |
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Exploration du génome du peuplier noir : identification de variations structurales1. colloque INRAE Genomics, May 2022, Orléans, France. |
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Étude du polymorphisme des génomes végétauxColloque INRAE Genomics, May 2022, Orléans, France. |
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La génomique au service de la lavandePortes ouvertes Iteipmai, Jun 2021, Montboucher-sur-Jabron, France |
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Development of a new tool (4TREE) for adapted genome selection in European tree speciesGenTree, Jan 2020, Avignon, France. |
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LONG DNA TECHNOLOGIES EVALUATION FOR PLANT STRUCTURAL VARIATIONS DETECTION : NANOPORE ONT SEQUENCING vs BIONANO GENOMICS OPTICAL MAPPINGPlant and Animal Genome XXVIII Conference, Jan 2020, San Diego, United States. |
Long DNA technologies evaluation for plant structural variations detection: Nanopore ONT sequencing vs Bionano Genomics optical mapping- Plant and Animal Genome XXVIII Conference, 2020, San Diego, CA, United States |
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RésiLens: A research project aiming at identifying bruchid and root rot resistance sources in lentil (<em>Lens culinaris</em>)9. International Conference on Legume Genetics and Genomics (ICLGG 2019), Let's harness the potential of legumes, May 2019, Dijon, France. , 2019 |
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Étude du Polymorphisme des Génomes VégétauxJOURNÉES SCIENTIFIQUES DU DÉPARTEMENT BAP, Sep 2019, Giens, France |
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Flower-foraging insects and their pollen loads in french permanent grasslandsPAG XXVI - Plant and Animal Genome Conference, Jan 2018, San Diego, United States. , 1 p., 2018 |
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BSA-Seq : an efficient method to decipher a complex trait on Poplar, a highly heterozygous diploid genomePAG XXVI - Plant and Animal Genome Conference, Jan 2018, San Diego, United States. , 1 p., 2018 |
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BSA-Seq : An efficient tool to characterize loci involved in the Poplar leaf rust resistance.7. International Poplar Symposium (IPS VII), Oct 2018, Buenos Aires, Brazil. , 2018, IPS VII Poster Presentations |
Preliminary training of a genomic evaluation in a breeding pedigree of Populus nigra L.IUFRO Genomics and Forest Tree Genetics, May 2016, Arcachon, France. , 2016, Abstract Book. IUFRO Genomics and Forest Tree Genetics |
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Detection of WUE positional candidate genes by combining QTL maps and BAC sequencing with the annotated oak genome sequenceGenomics and Forest Tree Genetics Conference, May 2016, Arcachon, France. , 134 p., 2016, Book of abstracts |
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Performance of a multi-species-plant illumina beadchipPAG XXIV - Plant and Animal Genome Conference, Jan 2016, San Diego, United States. 2016, PAG XXIV - Plant and Animal Genome Conference |
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Are patterns of Populus nigra geographical differentiation for resistance to Melampsora larici-populina dependent of genetic variation of the pathogen populations?5. International Workshop on the Genetics of Tree-Parasite Interactions, Aug 2015, Orléans, France. , 2015, 5th International Workshop on the Genetics of Tree-Parasite Interactions. Book of abstracts |
Genetic architecture of quantitative Melampsora larici-populina leaf rust resistance in poplarsIUFRO Joint conference: Genetics of Five-Needle Pines, Rusts of Forest Trees, & Strobusphere, Jun 2014, Fort Collins, Colorado, United States. 2014 |
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Exploration of Populus nigra L. genetic variation for partial resistance against the co-adapted pathogen Melampsora larici-populinaInternational Poplar Symposium (IPS-VI), Jul 2014, Vancouver, British Columbia, Canada. , 2014, IPS VI |
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Identification, cibles et diversité de régulateurs expressionnels majeurs impliqués dans la production de biomasse chez le peuplierSéminaire AIP Bio-ressources, Feb 2013, Paris, France. 2013, ⟨10.13140/RG.2.1.3449.0403⟩ |
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A case study in marker‐assisted breeding for disease resistanceFinal Conference Noveltree project "Tree Breeding, Genomics and Evolutionary Biology", Oct 2012, Helsinki, Finland. , 2012, Final Conference Noveltree "Tree Breeding, Genomics and Evolutionary Biology : new synergies to tackle the impact of climate change in the 21st century" |
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Development and validation of a 12K SNP chip genotyping array for association genetics in Populus nigra using genome‐wide resequencing dataFinal Conference Noveltree "Tree Breeding, Genomics and Evolutionary Biology", Oct 2012, Helsinki, Finland. , 2012, Final Conference Noveltree "Tree Breeding, Genomics and Evolutionary Biology : new synergies to tackle the impact of climate change in the 21st century" |
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Genome-wide SNP detection and genetic population inferences on 52 P. nigra genotypes resequenced by next-generation sequencingFinal Conference Noveltree "Tree Breeding, Genomics and Evolutionary Biology", Oct 2012, Helsinki, Finland. , 2012, Final Conference Noveltree "Tree Breeding, Genomics and Evolutionary Biology : new synergies to tackle the impact of climate change in the 21st century" |
BAC libraries for structural genomic development in oakIUFRO working group “Genetics of Quercus and Nothofagus”, Oct 2012, Bordeaux, France. 1 p., 2012 |
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Diversité moléculaire de la région chromosomique contrôlant la résistance à la rouille foliaire dans les collections de peupliersColloque FRB : Les Ressources Génétiques (RG) face aux nouveaux enjeux environnementaux, économiques et sociétaux, Sep 2011, Montpellier, France. Fondation pour la Recherche sur la Biodiversité, 84 p., 2011, Les ressources génétiques face aux nouveaux enjeux environnementaux, économiques et sociaux |
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Resources and potential for candidate-gene association studies in European black poplar for leaf rust resistance4. International Rusts of Forest Trees Conference, IUFRO Working Party 7.02.05, May 2010, Florence, Italy. 1 p., 2010 |
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Patrons de diversité nucléotidique de gènes candidats à la tolérance au stress hydrique chez 5 espèces d'arbres forestiers7. colloque national du BRG "Ressources génétiques" : les ressources génétiques à l'heure des génomes, Oct 2008, Strasbourg, France. 1 p., 2008 |
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INTERPOPGER: Interactions between natural and artificial poplar stands and selection pressures associated with their management in French landscape. Poster.Population genetics and genomics of forest trees : from gene function to evolutionary dynamics and conservation; A joint conference of IUFRO working groups 2.04.01 (population, ecological and conservation genetics) and 2.04.10 (genomics), and COST Action E-28 (genosilva : european forest genomics network), Oct 2006, Madrid, Spain. 1 p., 2006, Population genetics and genomics of forest trees: from gene function to evolutionary dynamics and conservation. Programme and conference abstract book |
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Candidate QTLs for durable resistance to Melampsora larici-populina leaf rust identified in hybrid poplars.10.Plant and Animal Genome (PAG), Jan 2002, San Diego, United States. 2002 |
Preliminary data on resistance of progenies of Populus Deltoides to a cerambicidae border : Apriona Germari hope under artificial and natural infestationInternational Poplar Symposium II, Sep 1999, Orléans, France. 1999 |
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Detection of QTLs in Populus Trichocarpa linked with partial resistance to foliar rust Melampsora larici populina (race E2)International Poplar Symposium II, Sep 1999, Orléans, France. 1999 |
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Detection of QTLs by genotyping parents involved in a mating designPlant & animal genome V conference, Jan 1997, San Diego, France. 1997 |
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Analyse et exploitation de séquences SangerÉcole thématique. France. 2017 |
Genetic architecture of quantitative traits in trees: evolution of tools and methodsNovel Tree Breeding, 24, Instituto Nacional de Investigacion y Tecnologia Agraria y Alimentaria (INIA), 89 p., 2013, Monografias INIA : Serie forestal, 978-84-7498-558-0 |
Characterization of hybrids between Larix Decidua and L. Kaempferi by molecular markersINRA. 2002, pp.99-107 |
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Résistance des peupliers aux rouilles foliaires. Recherche de marqueurs moléculaires de la résistance aux rouillesINRA. 1995 |
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Compréhension de la dynamique des peuplements naturels de peupliers noirsDERF-INRA--61-21-10/94, 1994 |
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La conservation des ressources génétiques forestières (chênes, sapin, merisier, peuplier noir). Rapport final sur la contribution de l'INRADERF/AFOCEL/INRA--9370-B, 1994 |
Applications of molecular marker technologies in Populus breeding140 ref. chap. 14. 1997 |
Reconnaissance d'especes, de clones et d'hybrides de peupliers grace au polymorphisme des genes nucleaires codant pour les ARN ribosomiques : Hypotheses sur l'evolution du genre PopulusSciences du Vivant [q-bio]. Université Blaise Pascal (Clermont Ferrand 2), 1992. Français. ⟨NNT : ⟩ |