Access content directly

Pauline GARNIER-GERE

69
Documents

Publications

Image document

High-quality SNPs from genic regions highlight introgression patterns among European white oaks (Quercus petraea and Q. robur)

Tiange Lang , Pierre P. Abadie , Valérie Léger , Thibaut Decourcelle , Jean-Marc Frigerio et al.
Peer Community In Forest & Wood Sciences, 2021, pp.1-33. ⟨10.1101/388447⟩
Journal articles hal-01985021v1

Candidate gene SNP variation in floodplain populations of pedunculate oak (Quercus robur L.) near the species' southern range margin: Weak differentiation yet distinct associations with water availability

Martina Temunović , Pauline Garnier‐géré , Maja Morić , Jozo Franjić , Mladen Ivanković et al.
Molecular Ecology, 2020, 29 (13), pp.2359-2378. ⟨10.1111/mec.15492⟩
Journal articles hal-03157568v1

Quercus species divergence is driven by natural selection on evolutionarily less integrated traits

Jaroslav Klápště , Antoine Kremer , Kornel Burg , Pauline Garnier‐géré , Omnia Gamal El-Dien et al.
Heredity, In press, pp.1-17. ⟨10.1038/s41437-020-00378-6⟩
Journal articles hal-03009762v1

No evidence for genetic differentiation in juvenile traits between Belgian and French populations of the invasive tree Robinia pseudoacacia

Xavier Bouteiller , Frédéric Barraquand , Pauline Garnier‐géré , Noémie Harmand , Yec’han Laizet et al.
Plant Ecology and Evolution, 2018, 151 (1), pp.5-17. ⟨10.5091/plecevo.2018.1403⟩
Journal articles hal-02362339v1

Species-specific alleles at a β-tubulin gene show significant associations with leaf morphological variation within Quercus petraea and Q. robur populations

Ilga Porth , Pauline Garnier‐géré , Jaroslav Klápště , Caroline Scotti-Saintagne , Yousry A. El-Kassaby et al.
Tree Genetics and Genomes, 2016, 12 (4), 13 p. ⟨10.1007/s11295-016-1041-8⟩
Journal articles hal-02634711v1

Single-nucleotide polymorphism discovery and validation in high-density SNP array for genetic analysis in European white oaks

Camille Lepoittevin , Catherine Bodenes-Brezard Bodénès , Emilie E. Chancerel , Laure Villate , Tiange Lang et al.
Molecular Ecology Resources, 2015, 15 (6), pp.1446-1459. ⟨10.1111/1755-0998.12407⟩
Journal articles hal-02635881v1

Nucleotide polymorphisms in a pine ortholog of the Arabidopsis degrading enzyme cellulase KORRIGAN are associated with early growth performance in Pinus pinaster

José Antonio Cabezas , Santiago C. González-Martínez , Carmen Collada , María Angeles Guevara , Christophe C. Boury et al.
Tree Physiology, 2015, 35 (9), pp.1000-1006. ⟨10.1093/treephys/tpv050⟩
Journal articles hal-02640523v1

Molecular proxies for climate maladaptation in a long-lived tree (Pinus pinaster Aiton, Pinaceae)

Juan-Pablo Jaramillo-Correa , Isabel Rodríguez-Quilón , Delphine Grivet , Camille Lepoittevin , Federico Sebastiani et al.
Genetics, 2015, 199 (3), pp.793-807. ⟨10.1534/genetics.114.173252⟩
Journal articles hal-02635555v1
Image document

High-throughput transcriptome sequencing and preliminary functional analysis in four Neotropical tree species

Louise Brousseau , Alexandra Tinaut , Caroline Duret , Tiange Lang , Pauline Garnier‐géré et al.
BMC Genomics, 2014, 15, 13 p. ⟨10.1186/1471-2164-15-238⟩
Journal articles hal-01032439v1

Development of genomic resources for Nothofagus species using next-generation sequencing data

Veronica El Mujtar , L.A. Gallo , T. Lang , Pauline Garnier‐géré
Molecular Ecology Resources, 2014, 14 (6), pp.1281-1295. ⟨10.1111/1755-0998.12276⟩
Journal articles hal-02636859v1

Outlier loci highlight the direction of introgression in oaks

Erwan Guichoux , Pauline Garnier‐géré , Lelia L. Lagache , Tiange Lang , Christophe C. Boury et al.
Molecular Ecology, 2013, 22 (2), pp.450-62. ⟨10.1111/mec.12125⟩
Journal articles hal-02646008v1

Association mapping for growth, straightness and wood chemistry traits in the Pinus pinaster Aquitaine breeding population

Camille Lepoittevin , Luc Harvengt , Christophe Plomion , Pauline Garnier‐géré
Tree Genetics and Genomes, 2012, 8 (1), pp.113-126. ⟨10.1007/s11295-011-0426-y⟩
Journal articles hal-02650860v1

Strength, diversity and plasticity of postmating reproductive barriers between two hybridizing oak species (Quercus robur L. and Quercus petraea (Matt) Liebl.)

Pierre P. Abadie , Guy G. Roussel , Benjamin Dencausse , C. Bonnet , Evangelista Bertocchi et al.
Journal of Evolutionary Biology, 2012, 25 (1), pp.157-173. ⟨10.1111/j.1420-9101.2011.02414.x⟩
Journal articles hal-02645602v1
Image document

Development and implementation of a highly-multiplexed SNP array for genetic mapping in maritime pine and comparative mapping with loblolly pine

Emilie E. Chancerel , Camille Lepoittevin , Grégoire G. Le Provost , Yao-Cheng Lin , Juan Pablo Jaramillo-Correa et al.
BMC Genomics, 2011, 12, 14 p. ⟨10.1186/1471-2164-12-368⟩
Journal articles hal-02649406v1
Image document

In vitro vs in silico detected SNPs for the development of a genotyping array : what can we learn from a non-model species?

Camille Lepoittevin , Jean-Marc Frigerio , Pauline Garnier‐géré , Franck F. Salin , María-Teresa Cervera et al.
PLoS ONE, 2010, 5 (6), 9 p. ⟨10.1371/journal.pone.0011034⟩
Journal articles hal-02662512v1

The estimator of optimal measure of allelic association : mean, variance and probability distribution when the sample size tends to infinity

Brigitte B. Mangin , Pauline Garnier‐géré , Christine Cierco-Ayrolles
Statistical Applications in Genetics and Molecular Biology, 2008, 7 (1), pp.23. ⟨10.2202/1544-6115⟩
Journal articles hal-02657661v1

Contrasting patterns of selection at Pinus pisaster Ait. drought stress candidate genes as revealed by genetic differentiation analyses

Emmanuelle Eveno , C. Collada , M.A. Guevara , Valérie V. Léger , A. Soto et al.
Molecular Biology and Evolution, 2008, 25 (2), pp.417-437. ⟨10.1093/molbev/msm272⟩
Journal articles hal-02657780v1

Plasticity of maritime pine (Pinus pinaster Ait.) wood forming tissues during a growing season.

Jorge Almiro Paiva , Pauline Garnier‐géré , J. C. Rodrigues , A. Alves , Sara Santos et al.
New Phytologist, 2008, 179 (4), pp.1080-1094. ⟨10.1111/j.1469-8137.2008.02536.x⟩
Journal articles hal-02657853v1

Molecular and phenotypic profiling from the base to the crown in maritime pine wood-forming tissue

Jorge Almiro Paiva , Marcelo Arnoldo Garces , A. Alves , Pauline Garnier‐géré , J.C. Rodrigues et al.
New Phytologist, 2008, 178 (2), pp.283-301. ⟨10.1111/j.1469-8137.2008.02379.x⟩
Journal articles hal-02655721v1

Nucleotide variation in genes involved in wood formation in two species

David Pot , Lisa Mcmillan , Craig Echt , Grégoire G. Le Provost , Pauline Garnier‐géré et al.
New Phytologist, 2005, 167 (1), pp.101-112. ⟨10.1111/j.1469-8137.2005.01417.x⟩
Journal articles hal-02677755v1

Standardizing for microsatellite length in comparisons of genetic diversity

Remy R. Petit , Marie-France Deguilloux , Joëlle Chat , Delphine Grivet , Pauline Garnier‐géré et al.
Molecular Ecology, 2005, 14 (3), pp.885-890. ⟨10.1111/j.1365-294X.2005.02446.x⟩
Journal articles hal-02682716v1

Automated SNP detection in expressed sequence tags : statistical considerations and application to maritime pine sequences

Loick Le Dantec , David Chagné , David Pot , Olivier Cantin , Pauline Garnier‐géré et al.
Plant Molecular Biology, 2004, 54 (3), pp.461-470. ⟨10.1023/B:PLAN.0000036376.11710.6f⟩
Journal articles hal-02679200v1

Automated SNP detection in expressed sequence tags: statistical considerations and application to maritime pine sequences

Loïck Le Dantec , David Chagné , David Pot , Olivier Cantin , Pauline Garnier‐géré et al.
Plant Molecular Biology, 2004, 54, pp.461-470
Journal articles hal-00306578v1

Ecology and genetics of tree invasions: from recent introductions to Quaternary migrations

Remy R. Petit , Ronald Bialozyt , Pauline Garnier‐géré , Arndt Hampe
Forest Ecology and Management, 2004, 197 (1-3), pp.117-137. ⟨10.1016/j.foreco.2004.05.009⟩
Journal articles hal-02683481v1

Modelling the impact of colonisation on genetic diversity and differentiation of forest trees : interaction of life cycle, pollen flow and seed long-distance dispersal

Frédéric Austerlitz , Pauline Garnier‐géré
Heredity, 2003, 90 (4), pp.282-290
Journal articles hal-02670386v1

Model-based analysis of the likelihood of gene introgression from genetically modified crops into wild relatives

C.J. Thompson , B.J.P. Thompson , P.K. Ades , R. Cousens , Pauline Garnier‐géré et al.
Ecological Modelling, 2003, 162 (6), pp.199-209. ⟨10.1016/S0304-3800(02)00347-2⟩
Journal articles hal-02677512v1

Modelling the impact of colonisation on genetic diversity and differentiation of forest trees: interaction of life cycle, pollen flow and seed long-distance dispersal.

F. Austerlitz , Pauline Garnier‐géré
Heredity, 2003, 90 (4), pp.282-290. ⟨10.1038/sj.hdy.6800243⟩
Journal articles hal-00531062v1

Influences of triploidy, parentage and genetic diversity on growth of the pacific oyster Crassostrea gigas reared in contrasting natural environments

Pauline Garnier‐géré , Y. Naciri-Graven , S. Bougrier , A. Magoulas , Maurice Héral et al.
Molecular Ecology, 2002, 11 (8), pp.1499-1514
Journal articles hal-02673901v1

Environmental surrogates for predicting and conserving adaptive genetic variability in tree species

Pauline Garnier‐géré , P.K. Ades
Conservation Biology, 2001, 15 (6), pp.1632-1644. ⟨10.1046/j.1523-1739.2001.00180.x⟩
Journal articles hal-02677586v1

COSTLY POLLEN IN MAIZE

Pauline Garnier‐géré , Sandrine Maurice , Isabelle Olivieri
Evolution - International Journal of Organic Evolution, 1993, 47 (3), pp.946-949
Journal articles halsde-00337623v1

A computer program for testing pairwise linkage disequilibria in subdivided populations

Pauline Garnier‐géré , C. Dillmann
Journal of Heredity, 1992, 83 (3), pp.239
Journal articles hal-02706765v1

Strong evidence of Bateson-Dobzhansky-Muller incompatibilities in white oaks shed light on the evolution of their reproductive barriers

Pauline Garnier‐géré , Stéphanie Mariette , Camille Lepoittevin
2. Joint Congress on Evolutionary Biology (EVOLUTION 2018), Aug 2018, Montpellier, France
Conference papers hal-02786261v1
Image document

Evolutionary history of tropical tree species complexes: species delimitation and adaptive genetic variation in the Brazil nut clade (Lecythidaceae)

Myriam Heuertz , Quentin Jehanne , Katharina Birgit Budde , Henri Caron , Niklas Tysklind et al.
European Conference of Tropical Ecology (GTOE2018), Mar 2018, Paris, France. pp.393
Conference papers hal-01837405v1

Evolution of reproductive barriers in European oaks

Pauline Garnier‐géré , Pierre P. Abadie , Camille Lepoittevin , Stéphanie Mariette , Tiange Lang et al.
2017 IUFRO Genetics and Genomics of Fagacae and Nothofagacae, Nov 2017, Shanghai, China
Conference papers hal-02786266v1

Hybridization and patterns of adaptive genetic variation in tropical trees of the Bertholletia clade (Lecythidaceae) in French Guiana

Myriam Heuertz , Quentin Jehanne , Katharina Birgit Budde , Henri Caron , Veronica El Mutjar et al.
Meeting of the German Society for Tropical Ecology (GTOE2017), Feb 2017, Bruxelles, Belgium
Conference papers hal-01837406v1

A real-time evolution experiment with oak and powdery mildew

Benoît Barres , Catherine Bodenes-Brezard Bodénès , Christian Burban , Christian Cyril Dutech , Virgil Fievet et al.
5. International Workshop on the Genetics of Tree-Parasite Interactions, Aug 2015, Orléans, France. 90 p
Conference papers hal-02741271v1
Image document

Genetic association for growth and biomass in maritime pine

J.A. Cabezas , S.C. González‐martínez , C. Collada , Camille Lepoittevin , Christophe C. Boury et al.
Final Conference Noveltree "Tree Breeding, Genomics and Evolutionary Biology", Oct 2012, Helsinki, Finland. 69 p
Conference papers hal-02748063v1

Comparaison de la différentiation nucléotidique pour des gènes candidats le long d'un gradient altitudinal : une approche expérimentale et par simulation chez Fagus sylvatica

Hadrien Lalagüe , Pauline Garnier‐géré , Santiago Gonzalez Martinez , Bruno Fady , Giovanni Giuseppe Vendramin et al.
Petit Pois Déridés 2012 : 34. Réunion Annuelle du Groupe d'Etude de Biologie et Génétique des Populations, Aug 2012, Avignon, France. 118 p
Conference papers hal-02750389v1
Image document

Population genetic structure, plant material certification and climate adaptation in maritime pine breeding zones

J.P. Jaramillo‐correa , D. Grivet , Camille Lepoittevin , F. Sebastiani , Myriam Heuertz et al.
Final Conference Noveltree "Tree Breeding, Genomics and Evolutionary Biology", Oct 2012, Helsinki, Finland. 69 p
Conference papers hal-02748065v1

Nucleotide diversity patterns of drought and cold tolerance candidate genes along a Fagus sylvatica altitudinal gradient.

Hadrien Lalagüe , Pauline Garnier‐géré , Santiago C. Gonzalez-Martinez , Giovanni G. Vendramin , Sylvie Oddou-Muratorio et al.
12th EEF Congress: Responding to Rapid Environmental Change, Sep 2011, Avila, Spain. 1 p
Conference papers hal-02808568v1

Interspecific cross-compatibility between two oak species and nucleotide differentiation in genes potentially involved in reproductive barriers

Pierre P. Abadie , Guy G. Roussel , Tiange Lang , Remy R. Petit , Antoine Kremer et al.
Conference on Forest Ecosystem Genomics and Adaptation, Jun 2010, Madrid, Spain
Conference papers hal-02754095v1

Joint evolution of two quantitative traits in constant and changing environments

Marta Benito Garzón , Pauline Garnier‐géré , Frédéric Austerlitz
Conference on Forest Ecosystem Genomics and Adaptation, Jun 2010, Madrid, Spain
Conference papers hal-02755632v1

Selective pressures between oaks and their obligate fungal parasite causing powdery mildew

Marie Laure M. L. Desprez Loustau , Thibaut Decourcelle , Sylvain S. Delzon , Christian Cyril Dutech , Nicolas Feau et al.
Conference on Forest Ecosystem Genomics and Adaptation, Jun 2010, Madrid, Spain
Conference papers hal-02755832v1
Image document

Candidate gene variation in common beech (Fagus sylvatica L.) along an altitudinal gradient

Hadrien Lalagüe , Bruno Fady , Pauline Garnier‐géré , Santiago C. Gonzalez-Martinez , - Yao-Cheng Lin et al.
Forest ecosystem genomics and adaptation, Jun 2010, San Lorenzo de El Escorial, Spain
Conference papers hal-02755653v1

Can nucleotide diversity patterns in maritime pine (Pinus pinaster Aiton.) wood formation candidate genes be explained by demography or selection?

Camille Lepoittevin , Christophe Plomion , Pauline Garnier‐géré
Conference on Forest Ecosystem Genomics and Adaptation, Jun 2010, Madrid, Spain
Conference papers hal-02751095v1

Genome scanning of regions showing divergent evolution between white oaks (Quercus petraea (matt.) Liebl. and Q.robur l.) : new insights from the oak allelic resequencing project

Pauline Garnier‐géré , Tiange Lang , Pierre P. Abadie , Thibaut Decourcelle , Valérie V. Léger et al.
Conference on Forest Ecosystem Genomics and Adaptation, Jun 2010, Madrid, Spain
Conference papers hal-02753045v1

Candidate gene variation along an altitudinal gradient in Fagus sylvatica

Hadrien Lalagüe , Bruno Fady , Pauline Garnier‐géré , S.C. González-Martínez , Yao-Cheng Lin et al.
Colloque « Ecologie 2010, Sep 2010, Montpellier, France
Conference papers hal-02821054v1

Genetic variability in 3D coarse root architecture in Pinus pinaster

Frederic F. Danjon , Emmanuelle Eveno , Christophe Plomion , Pauline Garnier‐géré
2. International Conference Wind Effects on Trees, Oct 2009, Freiburg, Germany
Conference papers hal-02754108v1

Coarse root architecture and stability in a 5-years-old Pinus pinaster provenance x progeny test

Frederic F. Danjon , Emmanuelle Eveno , Frédéric Bernier , François Hubert , Julien Brach et al.
COST E38 Meeting "Woody root processes - Revealing the hidden half", May 2008, Lisbonne, Portugal
Conference papers hal-02753857v1

Strong linkage disequilibrium and balanced selection in Pinus pinaster transcription factors putatively involved in wood formation

Camille Lepoittevin , Pauline Garnier‐géré , François Hubert , Christophe Plomion
IUFRO-CTIA joint conference, “Adaptation, Breeding and Conservation in the Era of Forest Tree Genomics and Environmental Change”, Aug 2008, Québec City, Canada. 1 p
Conference papers hal-02817240v1
Image document

Association mapping for wood quality in Pinus pinaster Aquitaine breeding population

Camille Lepoittevin , Pauline Garnier‐géré , François Hubert , Franck Salin , Emmanuelle Eveno et al.
IUFRO-CTIA joint conference, "Adaptation, Breeding and Conservation in the Era of Forest Tree Genomics and Environmental Change", Aug 2008, Québec City, Canada. 2 p
Conference papers hal-01032075v1

Development of genomic resources in oak to study the structure, variability, evolution and functioning of its genome

Christophe Plomion , Franck Salin , Jean-Marc Frigerio , Catherine Bodenes , Patricia Faivre Rampant et al.
Tree Biotechnology 2007, Jun 2007, Ponta Delgada, Portugal. 33p
Conference papers hal-00337729v1
Image document

Effets de la sélection sur la diversité et la différenciation génétique moléculaire : résultats de simulations et application au pin maritime pour les gènes de la lignification

Pauline Garnier‐géré , Frédéric Austerlitz , Frank Bedon , Antoine Kremer , Christophe Plomion et al.
5. Colloque national du BRG, Nov 2004, Lyon, France
Conference papers hal-02762648v1

Un exemple de gestion des ressources genetiques en vue de la selection

A. Gallais , Henri Duval , Pauline Garnier‐géré , Alain A. Charcosset
Colloque international en hommage a Jean Pernes, Jan 1992, Paris, France
Conference papers hal-02774046v1

Evolutionary history of tropical tree species complexes: species delimitation and adaptive genetic variation in the Brazil nut clade (Lecythidaceae)

Myriam Heuertz , Quentin Jehanne , Katharina Birgit Budde , Henri Caron , Niklas Tysklind et al.
2. Joint Congress on Evolutionary Biology (EVOLUTION 2018), Aug 2018, Montpellier, France. , 2018
Conference poster hal-02786265v1

Demographic history of Pinus pinaster at the Northern range of its distribution: what can we learn for ABC models?

Camille Lepoittevin , François Hubert , Franck F. Bedon , Valérie V. Léger , Luc Harvengt et al.
2. Joint Congress on Evolutionary Biology (EVOLUTION 2018), Aug 2018, Montpellier, France. , 2018
Conference poster hal-02786263v1

Environmental correlates of SNP variation across Quercus robur populations from the species’southern range margin

Martina Temunovic , Bogdan Saša , Franjić Jozo , Ivanković Mladen , Popović Maja et al.
Genomics and Forest Tree Genetics Conference, May 2016, Arcachon, France. , 134 p., 2016, Book of abstracts
Conference poster hal-02741125v1

Nucleotide diversity patterns at genes potentially involved in nothofagus species divergence along altitudinal gradient

Veronica El Mujtar , Leonardo Gallo , Pauline Garnier‐géré
IUFRO working group “Genetics of Quercus and Nothofagus”, Oct 2012, Bordeaux, France. 1 p., 2012
Conference poster hal-02807214v1

Nucleotide diversity and differentiation of candidate genes related to phenology and abiotic stress along an altitudinal gradient of Fagus sylvatica

Hadrien Lalagüe , Pauline Garnier‐géré , Santiago C. Gonzalez-Martinez , Bruno Fady , Giovanni G. Vendramin et al.
IUFRO working group “Genetics of Quercus and Nothofagus”, Oct 2012, Bordeaux, France. 1 p., 2012
Conference poster hal-02808497v1

Identifying the genetic bases of natural variation in resistance to powdery mildew in a Quercus robur population

Benoît Barres , Pauline Garnier‐géré , Catherine Bodenes-Brezard Bodénès , Christian Burban , Emilie E. Chancerel et al.
IUFRO working group “Genetics of Quercus and Nothofagus”, Oct 2012, Bordeaux, France. 1 p., 2012
Conference poster hal-02808598v1

Chloroplast genome comparison of two South American Nothofagus species

Veronica El Mujtar , Leonardo Gallo , Pauline Garnier‐géré
IUFRO working group “Genetics of Quercus and Nothofagus”, Oct 2012, Bordeaux, France. 1 p., 2012
Conference poster hal-02803356v1
Image document

Can nucleotide diversity patterns in Pinus pinaster lignification transcription factors be explained by demography or selection?

Camille Lepoittevin , François Hubert , Christophe Plomion , Pauline Garnier‐géré
12. Congress of the European Society for Evolutionary Biology, Aug 2009, Turin, Italy. 2 p., 2009
Conference poster hal-02813943v1
Image document

Patrons de diversité nucléotidique de gènes candidats à la tolérance au stress hydrique chez 5 espèces d'arbres forestiers

Pauline Garnier‐géré , Isabella Paolucci , Thibaut Decourcelle , Véronique V. Jorge , Emmanuelle Eveno et al.
7. colloque national du BRG "Ressources génétiques" : les ressources génétiques à l'heure des génomes, Oct 2008, Strasbourg, France. 1 p., 2008
Conference poster hal-02821517v1
Image document

Studying the landscape of nucleotide diversity in candidate genes for wood quality in Pinus pinaster

Camille Lepoittevin , Luis Cancino , Emmanuelle Eveno , Pauline Garnier‐géré , John Mackay et al.
IUFRO Conference "Tree Biotechnology", Jun 2007, Ponta Delgada, Portugal. 2 p., 2007
Conference poster hal-02817476v1

Historical Genomics

Louise Brousseau , Pauline Garnier‐géré , Charles R. Clément
Jean-François Molino; Guillaume Odonne. Methods in Historical Ecology - Insights from Amazonia, 1, Routledge, 2021, 978-0-367-18221-2. ⟨10.4324/9780429060175⟩
Book sections hal-03113371v1

Patterns of nucleotide diversity and association mapping

Santiago C. González-Martínez , S. Dillon , Pauline Garnier‐géré , M.R. Gil , D. Grivet et al.
Genetics, genomics and breeding of conifers, CRC Press Boca Raton, 447 p., 2011, Genetics, Genomics and Breeding of Crop Plants, 978-1-57808-719-8
Book sections hal-02808513v1
Image document

Genetics of large populations and association studies

Lounès Chikhi , Pauline Garnier‐géré
Encyclopedia of Life Sciences, Wiley, 2005, 978-0-470-06651-5. ⟨10.1038/npg.els.0005446⟩
Book sections hal-02833864v1

Histoires d'adaptation et de spéciation dans quelques populations naturelles d'arbres forestiers

Pauline Garnier‐géré
Sciences du Vivant [q-bio]. Université des Sciences et Technologies (Bordeaux 1), 2012
Habilitation à diriger des recherches tel-02803895v1