Peter Czuppon

23
Documents

Publications

Publications

The role of evolving niche choice in herbivore adaptation to host plants

Peter Nabutanyi , Alitha Edison , Peter Czuppon , Shuqing Xu , Meike J Wittmann

Journal of Evolutionary Biology, 2025, 38 (3), pp.305-319. ⟨10.1093/jeb/voae154⟩

Article dans une revue hal-05567161v1

Drivers and impact of the early silent invasion of SARS-CoV-2 Alpha

Benjamin Faucher , Chiara E Sabbatini , Peter Czuppon , Moritz U G Kraemer , Philippe Lemey et al.

Nature Communications, 2024, 15 (1), pp.2152. ⟨10.1038/s41467-024-46345-1⟩

Article dans une revue hal-04798323v1
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Maintenance of long-term transposable element activity through regulation by nonautonomous elements

Adekanmi Daniel Omole , Peter Czuppon

Genetics, 2024, 229 (2), ⟨10.1093/genetics/iyae209⟩

Article dans une revue hal-05536765v1
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Using early detection data to estimate the date of emergence of an epidemic outbreak

Sofía Jijón , Peter Czuppon , François Blanquart , Florence Débarre

PLoS Computational Biology, 2024, 20 (3), pp.e1011934. ⟨10.1371/journal.pcbi.1011934⟩

Article dans une revue hal-04660551v1
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Harbouring Blochmannia incurs costs: a trade-off between the necessity of the obligate primary endosymbiont for brood development and its costs for adult carpenter ants (Hymenoptera: Formicidae)

Anika Preuss , Peter Czuppon , Ulrich R Ernst , Jürgen Gadau

Myrmecological News, 2023, 33, pp.211-219. ⟨10.25849/myrmecol.news_033:211⟩

Article dans une revue hal-05536630v1
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A stochastic analysis of the interplay between antibiotic dose, mode of action, and bacterial competition in the evolution of antibiotic resistance

Peter Czuppon , Troy Day , Florence Débarre , François Blanquart

PLoS Computational Biology, 2023, 19 (8), pp.e1011364. ⟨10.1371/journal.pcbi.1011364⟩

Article dans une revue hal-04275613v1
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From individual-based epidemic models to McKendrick-von Foerster PDEs: a guide to modeling and inferring COVID-19 dynamics

Félix Foutel-Rodier , François Blanquart , Philibert Courau , Peter Czuppon , Jean-Jil Duchamps et al.

Journal of Mathematical Biology, 2022, 85 (4), pp.43. ⟨10.1007/s00285-022-01794-4⟩

Article dans une revue hal-03835684v1
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Revisiting the number of self‐incompatibility alleles in finite populations: From old models to new results

Peter Czuppon , Sylvain Billiard

Journal of Evolutionary Biology, 2022, 35 (10), pp.1296-1308. ⟨10.1111/jeb.14061⟩

Article dans une revue hal-03819875v1
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Years of life lost estimates cannot always be taken at face value: Response to “COVID-19 – exploring the implications of long-term condition type and extent of multimorbidity on years of life lost: a modelling study”

Marius Rubo , Peter Czuppon

Wellcome Open Research, 2022, 5, pp.137. ⟨10.12688/wellcomeopenres.16015.2⟩

Article dans une revue hal-05536616v1
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Understanding evolutionary and ecological dynamics using a continuum limit

Peter Czuppon , Arne Traulsen

Ecology and Evolution, 2021, 11 (11), pp.5857 - 5873. ⟨10.1002/ece3.7205⟩

Article dans une revue hal-03265985v1
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The stochastic dynamics of early epidemics: probability of establishment, initial growth rate, and infection cluster size at first detection

Peter Czuppon , Emmanuel Schertzer , François Blanquart , Florence Débarre

Journal of the Royal Society Interface, 2021, 18 (184), pp.20210575. ⟨10.1098/rsif.2021.0575⟩

Article dans une revue hal-03439370v1
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Success of prophylactic antiviral therapy for SARS-CoV-2: predicted critical efficacies and impact of different drug-specific mechanisms of action

Peter Czuppon , Florence Débarre , Antonio Gonçalves , Olivier Tenaillon , Alan S Perelson et al.

PLoS Computational Biology, 2021, 17 (3), pp.e1008752. ⟨10.1371/journal.pcbi.1008752⟩

Article dans une revue hal-03003001v3
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The Effect of Habitat Choice on Evolutionary Rescue in Subdivided Populations

Peter Czuppon , François Blanquart , Hildegard Uecker , Florence Débarre

The American Naturalist, 2021, 197 (6), pp.625-643. ⟨10.1086/714034⟩

Article dans une revue hal-03439344v1
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The search for sexually antagonistic genes: Practical insights from studies of local adaptation and statistical genomics

Filip Ruzicka , Ludovic Dutoit , Peter Czuppon , Crispin Y Jordan , Xiang-Yi Li et al.

Evolution Letters, 2020, 4 (5), pp.398-415. ⟨10.1002/evl3.192⟩

Article dans une revue hal-05465024v1
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Evolution of mating types in finite populations: The precarious advantage of being rare

Peter Czuppon , David Rogers

Journal of Evolutionary Biology, 2019, 32 (11), pp.1290-1299. ⟨10.1111/jeb.13528⟩

Article dans une revue hal-02311340v1
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Invasion and Extinction Dynamics of Mating Types Under Facultative Sexual Reproduction

Peter Czuppon , George W A Constable

Genetics, 2019, 213 (2), pp.567-580. ⟨10.1534/genetics.119.302306⟩

Article dans une revue hal-02313853v1
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Fixation probabilities in populations under demographic fluctuations

Peter Czuppon , Arne Traulsen

Journal of Mathematical Biology, 2018, 77 (4), pp.1233-1277. ⟨10.1007/s00285-018-1251-9⟩

Article dans une revue hal-05536474v1
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Limits of noise for autoregulated gene expression

Peter Czuppon , Peter Pfaffelhuber

Journal of Mathematical Biology, 2018, 77 (4), pp.1153-1191. ⟨10.1007/s00285-018-1248-4⟩

Article dans une revue hal-05536485v1
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Disentangling eco-evolutionary effects on trait fixation

Peter Czuppon , Chaitanya S Gokhale

Theoretical Population Biology, 2018, 124, pp.93-107. ⟨10.1016/j.tpb.2018.10.002⟩

Article dans une revue hal-05536468v1
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A spatial model for selection and cooperation

Peter Czuppon , Peter Pfaffelhuber

Journal of Applied Probability, 2017, 54 (2), pp.522-539. ⟨10.1017/jpr.2017.15⟩

Article dans une revue hal-05536461v1
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Some limit results for Markov chains indexed by trees

Peter Czuppon , Peter Pfaffelhuber

Electronic Communications in Probability, 2014, 19, pp.1-11. ⟨10.1214/ECP.v19-3601⟩

Article dans une revue hal-05535358v1