
Philippe ANDREY
89
Documents
Publications
Publications
Model-based reconstruction of whole organ growth dynamics reveals invariant patterns in leaf morphogenesisFirst European Conference From Genes to Plant Architecture: the Shoot Apical Meristem in All its States, INRAE; INRIA, Nov 2023, Poitiers, France
Communication dans un congrès
hal-04552791
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Beyond singularity in spatial analyses of plant cells and tissues7th International Plant Computational Biology Workshop, Sep 2023, Cambridge, United Kingdom
Communication dans un congrès
hal-04457883
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Computational approaches to decipher cell division patterns in plant embryo6th International Plant Computational Biology Workshop, Aug 2022, Lyon, France
Communication dans un congrès
hal-03776246
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Computational analysis of cell division patterns in the shoot apical meristemFirst European Conference From Genes to Plant Architecture: the Shoot Apical Meristem in All its States, Nov 2022, Poitiers, France
Communication dans un congrès
hal-04552636
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Statistical modeling of spatial interactions in biological patterns, with application to plant nuclear organizationQuantitative BioImaging Conference, Jan 2020, Oxford, United Kingdom
Communication dans un congrès
hal-03779479
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Mapping and comparing spatial distributions in biological imagingQuantitative BioImaging Conference, Jan 2019, Rennes, France
Communication dans un congrès
hal-03780303
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Statistical modeling of spatial interactions: new insights into the spatial organization of plant heterochromatinINDEPTH Cost Action Meeting: Impact of Chromatin Domains on Plant Phenotypes, Dec 2019, El Escorial, Spain
Communication dans un congrès
hal-03776229
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Statistical multi-scale atlasing of leaf morphogenesis7. International Workshop on Image Analysis Methos for the Plant Sciences 2019 (IAMPSI1́9), Jul 2019, Lyon, France
Communication dans un congrès
hal-02733992
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Deciphering cell division patterns in plant early embryogenesis by combining 3D image analysis and computer modellingPlant Growth and Form: International Symposium on Quantitative Plant Morphodynamics, Sep 2019, Heidelberg, Germany
Communication dans un congrès
hal-02786917
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Accurate dating of organs during growth can unmask invariant developmental patterns: illustration with plant leaf morphogenesis7. International Workshop on Image Analysis Methos for the Plant Sciences 2019 (IAMPSI1́9), Jul 2019, Lyon, France
Communication dans un congrès
hal-02734090
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Spatiotemporal quantification of 3D cellular parameters during leaf morphogenesisQuantitative BioImaging Conference, Jan 2019, Rennes, France
Communication dans un congrès
hal-02786234
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Surface parameterization and registration for statistical multiscale atlasing of organ developmentIEEE Conference on Computer Vision and Pattern Recognition (CVPR) Workshops, Jun 2019, Long Beach, Californie, United States. ⟨10.1109/CVPRW.2019.00022⟩
Communication dans un congrès
hal-02733984
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Combining 3D image analysis and computer modeling to understand cell division patterns in plant early embryogenesisQuantitative BioImaging Conference, Jan 2019, Rennes, France
Communication dans un congrès
hal-02791564
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Dynamic atlasing of gene expression domains from individual images16. IEEE International Symposium on Biomedical Imaging 2019 (ISBI1́9), Apr 2019, Venise, Italy. ⟨10.1109/ISBI.2019.8759188⟩
Communication dans un congrès
hal-02733986
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Image analysis and computer modelling of cell divisions in plant early embryogenesisPhycomorph EU Cost Action Workshop: “Imaging seaweed cells and tissues”, Nov 2018, Roscoff, France
Communication dans un congrès
hal-02785870
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Towards a spatio-temporal atlas of 3D cellular parameters during leaf morphogenesis16. IEEE International Conference on Computer Vision (ICCV 2017), Oct 2017, Venise, Italy. 3212 p., ⟨10.1109/ICCVW.2017.14⟩
Communication dans un congrès
hal-02737139
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Modeling 3D cell division patterns in plant early embryogenesisCLIPS 2017 - Multiscale live imaging in human, animal and plant health, Sep 2017, Gif-sur-Yvette, France
Communication dans un congrès
hal-02785869
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Spatial reorganization of Proopiomelanocortin (POMC)-expressing Neurons in the Arcuate Nucleus of POMC-EGFP Mice Resistant or Prone to ObesityExperimental Biology Meeting, Apr 2016, San Diego, Californie, United States. pp.2
Communication dans un congrès
hal-02740851
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Spatial reorganization of Proopiomelanocortin (POMC)-expressing Neurons in the Arcuate Nucleus of POMC-EGFP Mice Resistant or Prone to ObesityExperimental Biology 2016 Meeting, Apr 2016, San Diego, United States. Supplement 405.8
Communication dans un congrès
hal-01588459
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Modeling spatial distributions and patterns in biological imagingMini-symposium BioImage Informatics, GDR2588. FRA., Nov 2015, Paris, France
Communication dans un congrès
hal-02795146
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Spatial 3D modelling of nuclear architecture: application to A. thaliana leaf cell nucleiQuantitative BioImaging Conference, Jan 2015, Paris, France
Communication dans un congrès
hal-02795803
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Computational modelling of cell division patterns during plant early embryogenesisInternational Workshop on Image Analysis Methods for the Plant Sciences (IAMPS), Sep 2015, Louvain-la-Neuve, Belgium
Communication dans un congrès
hal-02795769
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A spatial statistical approach to analyze and model nuclear architectureInternational Workshop on Image Analysis Methods for the Plant Sciences (IAMPS), Sep 2015, Louvain-la-Neuve, Belgium
Communication dans un congrès
hal-02795768
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P186: Différences d’organisation spatiale des neurones pro-opiomélanocortine (POMC) dans le noyau arqué de l’hypothalamus de souris sensibles ou résistantes à l’obésité12es Journées Francophones de Nutrition, Dec 2014, Bruxelles, Belgium. pp.S165, ⟨10.1016/S0985-0562(14)70828-3⟩
Communication dans un congrès
hal-01579240
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De l’image numérique à la donnée scientifique: Qu’est-ce qu’une image numérique?Ecole Image INRA: De l'image numérique à la donnée scientifique : quelles démarches d'analyse et de traitement d'images ?, 2014, Lyon, France
Communication dans un congrès
hal-01336199
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Statistical groupwise comparison of spatial point patterns in biological imaging10. International Symposium on Biomedical Imaging - From Nano to Macro, Institute of Electrical and Electronics Engineers (IEEE). USA., Apr 2013, San Francisco, United States. 1519 p., ⟨10.1109/ISBI.2013.6556510⟩
Communication dans un congrès
hal-01204006
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Traitement central d'odeurs chez le rat vigile révélé par IRM améliorée par l'agent de contraste manganèse (MEMRI)1er congrès de la SFRMBM (Société Française de Résonance Magnétique en Biologie & Médecine), Mar 2012, Marseille, France
Communication dans un congrès
hal-00782677
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Reconstructing the three-dimensional surface of a branching and merging biological structure from a stack of coplanar contours8. IEEE International Symposium on Biomedical Imaging (ISBI 2011), Mar 2011, Chicago, United States. ⟨10.1109/ISBI.2011.5872479⟩
Communication dans un congrès
hal-02750403
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Architecture nucléaire : modélisation spatiale et application à la compréhension des mécanismes de différenciationColloque interne des IFR144, 115 et 87, Apr 2009, Gif-sur-Yvette, France. n.p
Communication dans un congrès
hal-02818125
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Modélisation de la dynamique temporelle des signaux calciques dans l'embryon précoce de souris3. Journées d'Animation Scientifique du Département de Physiologie Animale et Système d'Elevage, Oct 2009, Tours, France
Communication dans un congrès
hal-02757997
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Three-dimensional statistical modeling of neuronal populations : illustration with spatial localization of supernumerary neurons in the locus coeruleus of quaking mutant mice.9. Colloque de la Société des Neurosciences, May 2009, Bordeaux, France. ⟨10.1002/cne.21954⟩
Communication dans un congrès
istex
hal-02755219
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La modification du rapport NADH/NAD+ cytosolique durant la fécondation modifie la croissance des animaux et le poids de l'adulte chez la souris3. Journées d’Animation Scientifique du Département de Physiologie Animale et Systèmes d’Elevage, Oct 2009, Tours, France
Communication dans un congrès
hal-02752198
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Spatial normalisation of three-dimensional neuroanatomical models using shape registration, averaging, and warping5. IEEE International Symposium on Biomedical imaging - from Nano to Macro, May 2008, Paris, France
Communication dans un congrès
hal-02756733
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Activation maps in the nucleus of the solitary tract (NTS) in response to internal stimuli16. Annual meeting of the Society for the Study of Ingestive Behavior, Jul 2008, Paris, France
Communication dans un congrès
hal-01173371
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Activation maps in the nucleus of the solitary tract (NTS) in response to internal stimuliExperimental Biology 2008, Apr 2008, San Diego, United States
Communication dans un congrès
hal-01173368
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Dynamiques calciques de la fécondation: couplage entre approche expérimentale et de modélisation pour identifier l'origine des effets à long terme2. Journées de Restitution des Projets financés sur Crédits Incitatifs en 2006 et 2007, Nov 2008, Tours, France
Communication dans un congrès
hal-04519875
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A new filter for spot extraction in N-dimensional biological imaging5. IEEE International Symposium on Biomedical imaging - from Nano to Macro, May 2008, Paris, France
Communication dans un congrès
hal-02758229
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Statistical three-dimensional estimation and mapping of neuronal distributions8e Colloque de la Société des Neurosciences, May 2007, Montpellier, France
Communication dans un congrès
hal-02753768
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Activity mappings in olfactory bulb of newborn rabbits elicited by odor stimulation using quantitative manganese enhanced MRIAnnual Meeting of the International Society for Magnetic Resonance in Medicine (ISMRM) and of the European Society for Magnetic Resonance in Medicine and Biology (ESMRMB), May 2007, Berlin, Germany
Communication dans un congrès
hal-00160890
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Algorithm and software for the reconstruction, integration, and statistical analysis of 3D models in neuroanatomy8e Colloque de la Société des Neurosciences, May 2007, Montpellier, France
Communication dans un congrès
hal-02753925
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Cartographie statistique de populations de neuronesAromagri 2007, Oct 2007, Jouy-en-Josas, France. 1 p
Communication dans un congrès
hal-02816478
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Training a deep neural network to learn 3D division rules7th International Plant Computational Biology Workshop, Sep 2023, Cambridge (Angleterre), United Kingdom
Poster de conférence
hal-04829522
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BIP, a new software design for batch analysis of biological imagesFirst European Conference From Genes to Plant Architecture: the Shoot Apical Meristem in All its States, Nov 2022, Poitiers, France.
Poster de conférence
hal-04552618
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Spatial normalisation of three-dimensional neuroanatomical models using shape registration5. IEEE International Symposium on Biomedical Imaging (ISBI'08) : From Nano to Macro, May 2008, Paris, France. n.p., 2008
Poster de conférence
hal-02814911
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Activity mappings in olfactory bulb of newborn rabbits elicited by odor stimulation using quantitative manganese enhanced MRIJoint Annual Meeting ISMRM-ESMRM, May 2007, Berlin, Germany. 1 p., 2007
Poster de conférence
hal-02814005
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A method for testing Random spatial models on nuclear object distributionsPlant chromatin dynamics : Methods and protocols, 1675, Springer Protocol, Humana Press, 2018, Methods in Molecular Biology, 978-1-4939-7317-0. ⟨10.1007/978-1-4939-7318-7_29⟩
Chapitre d'ouvrage
hal-02786989
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Designing Image Analysis Pipelines in Light Microscopy: A Rational ApproachLight Microscopy, 1563, SPRINGER, pp.23, 2017, Methods in Molecular Biology, 978-1-4939-6810-7; 978-1-4939-6808-4. ⟨10.1007/978-1-4939-6810-7_13⟩
Chapitre d'ouvrage
hal-02788784
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A method for testing random spatial model on nuclear object distributionsMethods in molecular biology: Plant chromatin dynamics, Springer International Publishing, 2017
Chapitre d'ouvrage
hal-01603142
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Spatial modeling of telomere intra-nuclear distribution reveals non-random organization that varies during cell cycle and depends on LAP2 and BAF2024
Pré-publication, Document de travail
hal-04457815
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Large-scale analysis and computer modeling reveal hidden regularities behind variability of cell division patterns in Arabidopsis thaliana embryogenesis2022
Pré-publication, Document de travail
hal-03766429
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Analyse et modélisation d’organisations spatiales en imagerie biologiqueSciences du Vivant [q-bio]. Université Pierre et Marie Curie - Paris 6, 2015
HDR
tel-02795150
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