Philippe Bordron

17
Documents

Publications

Publications

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HUMESS: integrating quantitative transcriptomic analysis and metabolic modeling to unveil condition-specific gene signatures

Louis Paré , Philippe Bordron , Laurent David , Maxime Mahé , Audrey Bihouée et al.

Bioinformatics, 2025, 41 (8), pp.btaf448. ⟨10.1093/bioinformatics/btaf448⟩

Article dans une revue hal-05232371v1
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Maternal prebiotic supplementation impacts colitis development in offspring mice

Amélie Lê , Amandine Selle , Philippe Aubert , Tony Durand , Carole Brosseau et al.

Frontiers in Nutrition, 2023, 9, pp.988529. ⟨10.3389/fnut.2022.988529⟩

Article dans une revue hal-03930453v1
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Could the Microbiota Be a Predictive Factor for the Clinical : Response to Probiotic Supplementation in IBS-D? A Cohort Study

Justine Marchix , Lucille Quénéhervé , Philippe Bordron , Philippe Aubert , Tony Durand et al.

Microorganisms, 2023, 11 (2), pp.277. ⟨10.3390/microorganisms11020277⟩

Article dans une revue hal-04163623v1
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Fecal Supernatant from Adult with Autism Spectrum Disorder Alters Digestive Functions, Intestinal Epithelial Barrier, and Enteric Nervous System

Jacques Gonzales , Justine Marchix , Laetitia Aymeric , Catherine Le Berre-Scoul , Johanna Zoppi et al.

Microorganisms, 2021, 9 (8), pp.1723. ⟨10.3390/microorganisms9081723⟩

Article dans une revue hal-03637249v1
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Genome–Scale Metabolic Networks Shed Light on the Carotenoid Biosynthesis Pathway in the Brown Algae Saccharina japonica and Cladosiphon okamuranus

Delphine Nègre , Méziane Aite , Arnaud Belcour , Clémence Frioux , Loraine Brillet-Guéguen et al.

Antioxidants , 2019, 8 (11), pp.564. ⟨10.3390/antiox8110564⟩

Article dans une revue hal-02395080v1
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Gene Expression Analysis of Zobellia galactanivorans during the Degradation of Algal Polysaccharides Reveals both Substrate-Specific and Shared Transcriptome-Wide Responses

François Thomas , Philippe Bordron , Damien Eveillard , Gurvan Michel

Frontiers in Microbiology, 2017, 8, pp.article 1808. ⟨10.3389/fmicb.2017.01808⟩

Article dans une revue hal-01613034v1

Putative bacterial interactions from metagenomic knowledge with an integrative systems ecology approach

Philippe Bordron , Mauricio Latorre , Maria-Paz Cortés , Mauricio Gonzales , Sven Thiele et al.

MicrobiologyOpen, 2016, 5 (1), pp.106-117. ⟨10.1002/mbo3.315⟩

Article dans une revue hal-01246173v1

Integrated analysis of the gene neighbouring impact on bacterial metabolic networks.

P. Bordron , D. Eveillard , I. Rusu

IET Systems Biology, 2011, 5 (4), pp.261-268. ⟨10.1049/iet-syb.2010.0070⟩

Article dans une revue hal-00626709v1

An ASP application in integrative biology: identification of functional gene units

Philippe Bordron , Damien Eveillard , Alejandro Maass , Anne Siegel , Sven Thiele

LPNMR - 12th Conference on Logic Programming and Nonmonotonic Reasoning - 2013, Sep 2013, Corunna, Spain

Communication dans un congrès hal-00853762v1
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Integration of omics data to investigate common intervals

Sébastien Angibaud , Philippe Bordron , Damien Eveillard , Guillaume Fertin , Irena Rusu

1st International Conference on Bioscience, Biochemistry and Bioinformatics (ICBBB 2011), 2011, Singapore, Singapore. pp.101-105

Communication dans un congrès hal-00606226v1

SIPPER: A flexible method to integrate heterogeneous data into a metabolic network

Philippe Bordron , Damien Eveillard , Irena Rusu

Computational Advances in Bio and Medical Sciences (ICCABS), 2011 IEEE 1st International Conference on, Feb 2011, Orlando, United States. pp.40 - 45, ⟨10.1109/ICCABS.2011.5729937⟩

Communication dans un congrès hal-00585102v1