Pierre Nouhaud

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Affiliations actuelles

Centre de Biologie pour la Gestion des Populations (UMR CBGP)
Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)

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Publications

	A chromosome -level assembly of the pine processionar y moth (Thaumetopoea pityocampa) genome Mathieu Gautier , Pierre Nouhaud , Jacques Lagnel , Manuela Branco , Thomas Chertemps et al. Journal of Heredity, 2026, ⟨10.1093/jhered/esag035/8706354⟩ Article dans une revue hal-05688354v1
	Genomic incompatibilities are persistent barriers when speciation happens with gene flow in Formica ants Patrick Heidbreder , Noora Poikela , Pierre Nouhaud , Tuomas Puukko , Konrad Lohse et al. Molecular Biology and Evolution, 2026, 43 (5), pp.msag063. ⟨10.1093/molbev/msag063⟩ Article dans une revue hal-05598329v1
	The loss of a supergene in obligately polygynous <i>Formica</i> wood ant species Hanna Sigeman , Ina Satokangas , Matthieu de Lamarre , Patrick Krapf , Pierre Nouhaud et al. Molecular Biology and Evolution, 2025, 42 (12), pp.msaf320. ⟨10.1093/molbev/msaf320⟩ Article dans une revue hal-05482620v1
	Beyond genes‐for‐behaviour: The potential for genomics to resolve long‐standing questions in avian brood parasitism Katja Rönkä , Fabrice Eroukhmanoff , Jonna Kulmuni , Pierre Nouhaud , Rose Thorogood Ecology and Evolution, 2024, 14 (11), pp.e70335. ⟨10.1002/ece3.70335⟩ Article dans une revue hal-04852171v1
	Semipermeable species boundaries create opportunities for gene flow and adaptive potential I. Satokangas , Pierre Nouhaud , B. Seifert , P. Punttila , R. Schultz et al. Molecular Ecology, 2023, 32, pp.4329-4347. ⟨10.1111/mec.16992⟩ Article dans une revue hal-04144697v2
	Contrasting Evolutionary Patterns Between Sexual and Asexual Lineages in a Genomic Region Linked to Reproductive Mode Variation in the pea aphid Maud Rimbault , Fabrice Legeai , Jean Peccoud , Lucie Mieuzet , Elsa Call et al. Genome Biology and Evolution, 2023, 15 (9), pp.evad168. ⟨10.1093/gbe/evad168⟩ Article dans une revue hal-04232477v1
	Assembly of a Hybrid Formica aquilonia × F. polyctena Ant Genome From a Haploid Male Pierre Nouhaud , Jack Beresford , Jonna Kulmuni Journal of Heredity, 2022, 113 (3), pp.353-359. ⟨10.1093/jhered/esac019⟩ Article dans une revue hal-05598073v1
	Whole‐genome analysis of multiple wood ant population pairs supports similar speciation histories, but different degrees of gene flow, across their European ranges Beatriz Portinha , Amaury Avril , Christian Bernasconi , Heikki Helanterä , Josie Monaghan et al. Molecular Ecology, 2022, 31 (12), pp.3416 - 3431. ⟨10.1111/mec.16481⟩ Article dans une revue hal-05598064v1
	Rapid and predictable genome evolution across three hybrid ant populations Pierre Nouhaud , Simon H Martin , Beatriz Portinha , Vitor C Sousa , Jonna Kulmuni PLoS Biology, 2022, 20 (12), pp.e3001914. ⟨10.1371/journal.pbio.3001914⟩ Article dans une revue hal-04711227v1
	Differences in thermal tolerance between parental species could fuel thermal adaptation in hybrid wood ants Raphael Martin-Roy , Elisa Nygård , Pierre Nouhaud , Jonna Kulmuni The American Naturalist, 2021, 198 (2), pp.278-294. ⟨10.1086/715012⟩ Article dans une revue hal-05598080v1
	Secondary Evolve and Resequencing: An Experimental Confirmation of Putative Selection Targets without Phenotyping Claire Burny , Viola Nolte , Pierre Nouhaud , Marlies Dolezal Genome Biology and Evolution, 2020, 12 (3), pp.151-159. ⟨10.1093/gbe/evaa036AdvanceAccess⟩ Article dans une revue hal-05598083v1
	Instability of natural selection at candidate barrier loci underlying speciation in wood ants Jonna Kulmuni , Pierre Nouhaud , Lucy Pluckrose , Ina Satokangas , Kishor Dhaygude et al. Molecular Ecology, 2020, 29 (20), pp.3988 - 3999. ⟨10.1111/mec.15606⟩ Article dans une revue hal-05621089v1
	Understanding Admixture: Haplodiploidy to the Rescue Pierre Nouhaud , Alexandre Blanckaert , Claudia Bank , Jonna Kulmuni Trends in Ecology & Evolution, 2020, 35 (1), pp.34-42. ⟨10.1016/j.tree.2019.08.013⟩ Article dans une revue hal-04711248v1
	High-throughput fecundity measurements in Drosophila Pierre Nouhaud , François Mallard , Rodolphe Poupardin , Neda Barghi , Christian Schlötterer Scientific Reports, 2018, 8 (1), pp.4469. ⟨10.1038/s41598-018-22777-w⟩ Article dans une revue hal-05598094v1
	Identifying genomic hotspots of differentiation and candidate genes involved in the adaptive divergence of pea aphid host races Pierre Nouhaud , Mathieu Gautier , Anaïs Gouin , Julie Jaquiéry , Jean Peccoud et al. Molecular Ecology, 2018, 27 (16), pp.3287 - 3300. ⟨10.1111/mec.14799⟩ Article dans une revue hal-01892027v1
	Disentangling the Causes for Faster-X Evolution in Aphids Julie Jaquiéry , Jean Peccoud , Tiphaine Ouisse , Fabrice Legeai , Nathalie Prunier Leterme et al. Genome Biology and Evolution, 2018, 10 (2), pp.507-520. ⟨10.1093/gbe/evy015⟩ Article dans une revue hal-03276874v1
	Ancestral population reconstitution from isofemale lines as a tool for experimental evolution Pierre Nouhaud , Ray Tobler , Viola Nolte , Christian Schlötterer Ecology and Evolution, 2016, 6 (20), pp.7169 - 7175. ⟨10.1002/ece3.2402⟩ Article dans une revue hal-05598147v1
	Whole-genome re-sequencing of non-model organisms: lessons from unmapped reads Anaïs Gouin , Fabrice Legeai , Pierre Nouhaud , Annabel Whibley , Jean-Christophe Simon et al. Heredity, 2015, 114, pp.494-501. ⟨10.1038/hdy.2014.85⟩ Article dans une revue hal-01081094v1
	Genomics of adaptation to host-plants in herbivorous insects Jean-Christophe Simon , Emmanuelle d'Alencon , Endrick Guy , Emmanuelle Jacquin-Joly , Julie Jaquiéry et al. Briefings in Functional Genomics and Proteomics, 2015, 14 (6), pp.413-423. ⟨10.1093/bfgp/elv015⟩ Article dans une revue hal-03419843v1
	Genetic control of contagious asexuality in the pea aphid Julie Jaquiéry , Jean Peccoud , Tiphaine Ouisse , Fabrice Legeai , Nathalie Prunier-Leterme et al. PLoS Genetics, 2014, 10 (12), pp.e1004838. ⟨10.1371/journal.pgen.1004838⟩ Article dans une revue hal-01701165v1
	Genomic regions repeatedly involved in divergence among plant-specialized pea aphid biotypes Pierre Nouhaud , Jean Peccoud , Frédérique Mahéo , Lucie Mieuzet , Julie Jaquiéry et al. Journal of Evolutionary Biology, 2014, 27 (9), pp.2013-2020. ⟨10.1111/jeb.12441⟩ Article dans une revue hal-01178940v1
	Genome scans reveal candidate regions involved in the adaptation to host plant in the pea aphid complex. Julie Jaquiéry , Solenn Stoeckel , P. Nouhaud , L. Mieuzet , F. Mahéo et al. Molecular Ecology, 2012, 21 (21), pp.5251-64. ⟨10.1111/mec.12048⟩ Article dans une revue istex hal-00753439v1

	Detecting genomic incompatibilities and barriers during divergence with gene flow in Formica ants P Heidbreder , N Poikela , Pierre Nouhaud , T Puukko , K Lohse et al. Congress of the European Society for Evolutionary Biology (ESEB 2025), Sociedad Española de Biología Evolutiva, Aug 2025, Barcelona, Spain Communication dans un congrès hal-05225873v1
	Génomique de la divergence des pyrales du genre Ostrinia en Europe Pierre Nouhaud , Mathieu Gautier , Louise Brousseau , Sabine Nidelet Janin , Philippe Audiot et al. Petit Pois Déridé 2023, Jul 2023, Poitiers, France Communication dans un congrès hal-05705653v1
	Not so boring: genomic divergence between Ostrinia borers in Europe Pierre Nouhaud , Mathieu Gautier , Louise Brousseau , Sabine Nidelet Janin , Philippe Audiot et al. ADALEP network, Oct 2023, Versailles, France Communication dans un congrès hal-05705676v1
	Whole genome re-sequencing : lessons from unmapped reads Anaïs Gouin , Pierre Nouhaud , Fabrice Legeai , Guillaume Rizk , Jean-Christophe Simon et al. Journées Ouvertes Biologie Informatique Mathématiques, Jul 2013, Toulouse, France Communication dans un congrès hal-00907446v1

	Utilisation des polymorphismes : QTL, GWAS et scans génomiques Julie Jaquiéry , Pierre Nouhaud Principes des techniques de biologie moléculaire et génomique : 3e édition revue et augmentée, Quae, 2018, Savoir Faire, 978-2-7592-2389-3 Chapitre d'ouvrage hal-03318980v1

	Genomic signatures of selection and putative adaptive introgression during the African expansion of the house mouse Daniel Poveda-Martinez , Pierre Nouhaud , Philippe Gauthier , Fanny Degrugillier , Gauthier Dobigny et al. 2026 Pré-publication, Document de travail hal-05724822v1
	An annotated chromosome-level genome assembly of the Adzuki bean borer <i>Ostrinia scapulalis</i> (Lepidoptera: Crambidae) Pierre Nouhaud , Sabine Nidelet , Fabrice Legeai , Philippe Audiot , Joanna Lledo et al. 2026 Pré-publication, Document de travail hal-05713066v1
	A major selective sweep likely linked to insecticide resistance identified along altitudinal gradients in the pine processionary moth Pierre Nouhaud , Mathieu Gautier , Alexandre Schifano , Laure Saune , Carole Kerdelhue et al. 2026 Pré-publication, Document de travail (preprint/prepublication) hal-05705603v1

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Pierre Nouhaud

Publications

Publications

A chromosome -level assembly of the pine processionar y moth (Thaumetopoea pityocampa) genome

Genomic incompatibilities are persistent barriers when speciation happens with gene flow in Formica ants

The loss of a supergene in obligately polygynous <i>Formica</i> wood ant species

Beyond genes‐for‐behaviour: The potential for genomics to resolve long‐standing questions in avian brood parasitism

Semipermeable species boundaries create opportunities for gene flow and adaptive potential

Contrasting Evolutionary Patterns Between Sexual and Asexual Lineages in a Genomic Region Linked to Reproductive Mode Variation in the pea aphid

Assembly of a Hybrid Formica aquilonia × F. polyctena Ant Genome From a Haploid Male

Whole‐genome analysis of multiple wood ant population pairs supports similar speciation histories, but different degrees of gene flow, across their European ranges

Rapid and predictable genome evolution across three hybrid ant populations

Differences in thermal tolerance between parental species could fuel thermal adaptation in hybrid wood ants

Secondary Evolve and Resequencing: An Experimental Confirmation of Putative Selection Targets without Phenotyping

Instability of natural selection at candidate barrier loci underlying speciation in wood ants

Understanding Admixture: Haplodiploidy to the Rescue

High-throughput fecundity measurements in Drosophila

Identifying genomic hotspots of differentiation and candidate genes involved in the adaptive divergence of pea aphid host races

Disentangling the Causes for Faster-X Evolution in Aphids

Ancestral population reconstitution from isofemale lines as a tool for experimental evolution

Whole-genome re-sequencing of non-model organisms: lessons from unmapped reads

Genomics of adaptation to host-plants in herbivorous insects

Genetic control of contagious asexuality in the pea aphid

Genomic regions repeatedly involved in divergence among plant-specialized pea aphid biotypes

Genome scans reveal candidate regions involved in the adaptation to host plant in the pea aphid complex.

Detecting genomic incompatibilities and barriers during divergence with gene flow in Formica ants

Génomique de la divergence des pyrales du genre Ostrinia en Europe

Not so boring: genomic divergence between Ostrinia borers in Europe

Whole genome re-sequencing : lessons from unmapped reads

Utilisation des polymorphismes : QTL, GWAS et scans génomiques

Genomic signatures of selection and putative adaptive introgression during the African expansion of the house mouse

An annotated chromosome-level genome assembly of the Adzuki bean borer <i>Ostrinia scapulalis</i> (Lepidoptera: Crambidae)

A major selective sweep likely linked to insecticide resistance identified along altitudinal gradients in the pine processionary moth