
Pierre Pontarotti
71%
Libre accès
189
Documents
Identifiants chercheurs
Présentation
Publications
Publications
Long-Term Intra-Host Evolution of SARS-CoV-2 in an Immunocompromised Patient: Recombination and Within-Host Mutations Driving Viral Adaptation2025
Pré-publication, Document de travail
hal-05015227
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Symbiotic status does not preclude hybridisation in Mediterranean octocorals2024
Pré-publication, Document de travail
hal-04568927
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Pre-Columbian treponemes clarify worldwide spread of treponematosis2024
Pré-publication, Document de travail
hal-04403114
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Population genomics of Pocillopora corals: insights from RAD-sequencing2021
Pré-publication, Document de travail
hal-03374944
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Sequencing, de novo assembly and annotation of the genome of the scleractinian coral, Pocillopora acuta2021
Pré-publication, Document de travail
hal-03239739
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A metallo-beta-lactamase with both beta-lactamase and ribonuclease activity is linked with traduction in giant viruses2020
Pré-publication, Document de travail
hal-03047394
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Holobiont diversity in heterogeneous and anthropized marine environmentsEcology and Evolution: New perspectives and societal challenges, SFE² GfÖ EEF Joint meeting, International Conference on Ecological Sciences, Nov 2022, Metz, France
Communication dans un congrès
hal-03947518
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Immunogenetics in the age of next generation sequencing and the need for dedicated analytical solutionsHLA, 2019, Tours, France. pp.384
Communication dans un congrès
hal-02526687
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Coral plasticity and holobiont dynamics under thermal stress: intrapopulational, interpopulational and interspecific variability13th International Coral Reef Symposium, Jun 2016, Honolulu, United States. pp.38-39
Communication dans un congrès
hal-03965848
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Integration of European eel transcriptome into the PHYLOFISH project, a high throughput phylogenomic analysis designed to study teleost gene evolution after whole genome duplicationEel genome symposium 2014, Jan 2014, Leiden, Netherlands
Communication dans un congrès
hal-02743789
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Interactions ovocyte-cellules somatiques, une étude de génomique comparative chez les vertébrés9. Journées AGENAE, Mar 2012, La Rochelle, France
Communication dans un congrès
hal-02747100
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The <em>Nme</em> family: gene repertoire and evolutionary history8. International Congress of the NDP Kinase/Nm23/awd Family - From basic science to clinical application, Oct 2010, Heidelberg, Germany
Communication dans un congrès
hal-02818522
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OscileVIIIe Colloque Agenae / Genanimal, Nov 2010, Bordeaux, France
Communication dans un congrès
inria-00540830
v1
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Nme protein family evolutionary history, a vertebrate perspective with emphasis on the teleost groupEvolutionary biology 2009: Phylogenetics, speciation, co-evolution, development, genomes, life histories, plasticity.. What is new ?, Jun 2009, Rennes, France
Communication dans un congrès
hal-02752933
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La phylogénie à l'heure de l'annotation fonctionnellle des génomesSéminaire AIP INRA 2005-2007. Séquençage et Ressources Génétiques "du séquençage à la biologie intégrative", Nov 2007, Paris, France
Communication dans un congrès
hal-02752018
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Methods to identify and study the evolution of pseudogenes using a phylogenetic approachLaura Poliseno. Pseudogenes. Functions and Protocols, 2324, Springer US, pp.21-34, 2021, 978-1-0716-1502-7. ⟨10.1007/978-1-0716-1503-4_2⟩
Chapitre d'ouvrage
hal-03389474
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DDE Transposon as Public GoodsEvolutionary Biology—A Transdisciplinary Approach, Springer International Publishing, pp.337 - 357, 2020, ⟨10.1007/978-3-030-57246-4_14⟩
Chapitre d'ouvrage
hal-03043351
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DDE Transposon as Public GoodsEvolutionary Biology—A Transdisciplinary Approach, Springer International Publishing, pp.337-357, 2020, ⟨10.1007/978-3-030-57246-4_14⟩
Chapitre d'ouvrage
hal-03370014
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A Proposed Terminology of Convergent EvolutionOrigin and Evolution of Biodiversity, Springer International Publishing, 361p., 2019, 978-3-319-95953-5. ⟨10.1007/978-3-319-95954-2_18⟩
Chapitre d'ouvrage
hal-02418230
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Road map to study convergent evolution: A proposition for evolutionary systems biology approachesEvolutionary Biology : Convergent Evolution, Evolution of Complex Traits, Concepts and Methods, Springer International Publishing, 422 p., 2016, 978-3-319-41323-5. ⟨10.1007/978-3-319-41324-2_1⟩
Chapitre d'ouvrage
hal-02801520
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CD277 an Immune Regulator of T Cell Function and Tumor Cell RecognitionAdvances in Cancer Therapy, In Tech, pp.411-428, 2011, 978-953-307-703-1. ⟨10.5772/24915⟩
Chapitre d'ouvrage
hal-00827306
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Integration of evolutionary biology concepts for functional annotation and automation of complex research in evolution: the multi-agent software system DAGOBAHevolutionary biology-concepts biodiversity, macroevolution and genome evolution Evolutionary Biology - Concept Biodiversity, Macroevolution and Genome Evolution, SPRINGER, pp.71-87, 2011, 978-3-642-20762-4. ⟨10.1007/978-3-642-20763-1_5⟩
Chapitre d'ouvrage
hal-00827323
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12th evolutionary biology meeting at marseilles Meeting reportEvolutionary Biology Concept, Modeling, and Application, springer, pp.7-10, 2009
Chapitre d'ouvrage
hal-00827684
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A Possible Relationship Between the Phylogenetic Branch Lengths and the Chaetognath rRNA Paralog Gene Functionalities : Ubiquitous, Tissue-Specific or Pseudogenes.Evolutionary Biology from Concept to Application, SPRINGER, pp.155-164, 2008
Chapitre d'ouvrage
hal-00827395
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An Overview of Evolutionary Biology Concepts for Functional Annotation : Advances and ChallengesEvolutionary Biology from Concept to Application, SPRINGER, pp.209-215, 2008, 978-3-540-78992-5. ⟨10.1007/978-3-540-78993-2_13⟩
Chapitre d'ouvrage
hal-00827379
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Computational reconstruction of ancestral genomic regions from evolutionarily conserved gene clustersAncestral Sequence Reconstruction, oxford university press, pp.252, 2007, 9780199299188
Chapitre d'ouvrage
hal-00827430
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Computational reconstruction of ancestral genomic regions from evolutionarily conserved gene clustersAncestral Sequence Reconstruction, Oxford University Press, 272 p., 2007, 978-0199545575
Chapitre d'ouvrage
hal-02820457
v1
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The MHC big bang : duplication and exons shuffling during the chordate evolution. An hypothetico-deductive approachThe Major Histocompatibility Complex: Evolution, Structure, and Function, springer verlag japan, pp.561, 2000, 978-4431702764
Chapitre d'ouvrage
hal-00828020
v1
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Physical mapping of human chromosome 6.Human genome analysis., Biomedical and Health Research IOS PRESS, pp.101-115, 1998
Chapitre d'ouvrage
hal-00828081
v1
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Geography and History of the Genes in the Human MHC: Can We Predict MHC Organization in Nonhuman Primates?Molecular Biology and Evolution of Blood Group and MHC Antigens in Primates, Springer-Verlag GmbH, pp.325-338, 1997
Chapitre d'ouvrage
hal-00827530
v1
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Molecular organization and evolution of the chromosomal region containing the human major histocompatibility complexImmunogenetics of the Major Histocompatibility Complex, Verlag Chemic International Publishers, New York, pp.65-99, 1991
Chapitre d'ouvrage
hal-00827645
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Polymorphism and diversity in the murine class I gene family : a study of spontaneous mutantsEvolution and vertebrate immunity :the antigen-receptor and MHC gene families, University of Texas Press, pp.315-323, 1987
Chapitre d'ouvrage
hal-00827604
v1
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Epigenetic and genetic mechanisms of trained adaptation to global warming in coralsEVOLUTION 2018 - 2nd Joint Congress on Evolutionary Biology, Aug 2018, Montellier, France.
Poster de conférence
hal-03969153
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Convergent evolution: concepts, database, roadmap and case studiesAEEB: Evolutionary Biology Meeting, Sep 2017, Marseille, France. pp.189, 2017, 21st Evolutionary Biology Meeting
Poster de conférence
hal-02734433
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The PhyloFish project: an RNA-Seq approach coupled to high throughput phylogenomic analyses to study whole genome duplication impact on teleosts17. Evolutionary Biology Meeting at Marseilles, Sep 2013, Marseille, France. 2013, 17th Evolutionary Biology Meeting at Marseilles
Poster de conférence
hal-02745585
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Gene annotation with evolutionary support in teleosts with a focus on the salmonid lineage1. International Conference on Integrative Salmonid Biology ICISB, Jun 2012, Oslo, Norway. 2012, ICISB 2012
Poster de conférence
hal-02746168
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Histoire évolutive des gènes de la famille <em>Nme</em> chez les vertébrés et implication dans la compétence ovocytaire au développement chez les poissonsJournées des doctorants de l'Ifremer, Oct 2010, Brest, France. 2010
Poster de conférence
hal-02822027
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Analyse phylogénomique des duplications géniques chez les poissons téléostéens : une approche PAR RNASeq[Rapport de recherche] ANR-10-GENM-017, University of Oregon; Centre National de la Recherche Scientifique (CNRS); Aix Marseille Université (AMU); INRA SCRIBE Station Commune de Recherche en Ichtyophysiologie. Biodiversité et Environnement. 2015
Rapport
(rapport de recherche)
hal-02801550
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Interactions ovocyte-cellules somatiques, une étude de génomique comparative chez les vertébrés - Oscile[Contrat] ANR-08-GENM-033, INRA. 2013
Rapport
(rapport contrat/projet)
hal-02808395
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