Romain Yvinec
Présentation
Publications
Publications
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Data-driven PINN inference of oocyte dynamics in fish ovaries2026 |
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The insertion of Neomycin cassette impairs maternal and social behaviors in Arc/Arg3.1 knock-out mice2025 |
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Targeting selectively oxytocin receptor signalling efficiently improves social interaction in Fmr1 KO mice2024 |
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Hormone-regulated dynamics of mRNA distribution on ribosomes in Sertoli cells2025 |
β-arrestins and endocrine-related GPCRsCellular Endocrinology in Health and Disease, Elsevier, pp.445-458, 2021, 978-0-12-819801-8. ⟨10.1016/B978-0-12-819801-8.00021-1⟩ |
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The follicle-stimulating hormone signaling network in gonadal cells.Alfredo Ulloa-Aguirre; Ya-Xiong Tao. Cellular endocrinology in health and disease, Second Edition, Academic Press, 486 p., 2021, 9780128198018. ⟨10.1016/B978-0-12-819801-8.00020-X⟩ |
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Workflow description to dynamically model beta-arrestin signaling networksBeta-arrestins- Methods and protocols, 1957, , 2019, Methods in Molecular Biology, ⟨10.1007/978-1-4939-9158-7_13⟩ |
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Follicle-stimulating hormone receptor: Advances and remaining challengesG protein-coupled receptors: emerging paradigms in activation, signaling and regulation- Part A, 338 (1ère ed.), Elsevier, pp.1-58, 2018, International Review of Cell and Molecular Biology, 978-0-12-813772-7. ⟨10.1016/bs.ircmb.2018.02.001⟩ |
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Deterministic and stochastic Becker-Döring equations: Past and recent mathematical developmentsStochastic Processes, Multiscale Modeling, and Numerical Methods for Computational Cellular Biology, Editions Springer, pp.175-204, 2016, ⟨10.1007/978-3-319-62627-7⟩ |
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Probabilistic and Piecewise Deterministic models in BiologyESAIM: Proceedings and Surveys, 60, pp.225-245, 2017, ⟨10.1051/proc/201760225⟩ |
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Some contributions to the study of population dynamics models and coagulation-fragmentationProbability [math.PR]. Université de Tours, 2020 |
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Probabilistic modeling in cellular and molecular biologyGeneral Mathematics [math.GM]. Université Claude Bernard - Lyon I, 2012. English. ⟨NNT : 2012LYO10154⟩ |
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Stochastic Becker-Döring model: large population and large time results for phase transition phenomenaMOME2 2025 - Journée de modélisation mathématique pour l'écologie, Nov 2025, Amiens, France |
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Ovarian follicle population dynamics along lifetimeJMBS 2025 - Journées Math Bio Santé, Nov 2025, Montpellier, France |
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Computational Prediction of Intracellular Signaling Behavior via Machine LearningSIMBig 2025 - 12th International Conference on Information Management and Big Data, Juan Antonio Lossio-Ventura, and Hugo Alatrista-Salas, Oct 2025, Lima, Peru |
GPCR signaling: bias, kinetics and compartmentalizationApports de la modélisation mécaniste et de l'intelligence artificielle à la (recherche en) biologie, Nov 2024, Montpellier, France. 25p |
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Time scale separation in life-long ovarian follicles population dynamics modelBiology and Medicine Through Mathematics Conference, May 2024, Richmond (Virginie), United States. 36p |
Time scale separation in life-long ovarian follicles population dynamics modelBiomath seminar - NCstate, Jan 2024, Raleigh (NC), United States. 59p |
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Some remarks about the well-posedness of lifshitz-slyozov's equations with nucleation kinetics18. International Conference on Hyperbolic Problems: Theory, Numerics, Applications, Jun 2022, Malaga, Spain. pp.181-191, ⟨10.1007/978-3-031-55260-1_12⟩ |
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Comparative dynamics of female germ cell populations : insight from imaging and multiscale modelingJournées INRAE-INRIA 2023, Jul 2023, Nancy, France |
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Time scale separation in life-long ovarian follicles population dynamics modelSéminar EDP/ProbaStat Laboratoire de Mathématiques et Applications (LMA) de Poitiers, Mar 2023, Poitiers, France |
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Time scale separation in life-long ovarian follicles population dynamics modelSeminar Mathematical Biology at Duke University, Oct 2022, online, United States |
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Time scale separation in life-long ovarian follicles population dynamics model12. European Conference on Mathematical and Theoretical Biology - ECMTB 2022, European Society for Mathematical and Theoretical Biology (ESMTB); Society for Mathematical Biology (SMB), Sep 2022, Heidelberg, Germany. pp.110-111 |
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Stochastic Becker-Döring model: Large population and large time results for phase transition phenomenaSeminario de Ecuaciones Diferenciales, University of Granada, Dec 2022, Granada, Spain |
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Stochastic Becker-Döring model: large population and large time results for phase transition phenomenaChemical Reaction Networks Workshop, Jul 2022, Turin, Italy |
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Kinetic biased signaling: towards a system biology definition of drugs selectivityGonadotropins in the Physiopathology: Current advances in the Mechanisms of Action, Le studium, Sep 2022, Online, France |
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Stochastic Becker-Döring model: Large population and large time results for phase transition phenomenaSeminar on the Mathematics of Reaction Networks, Nov 2022, online, Italy |
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Modeling (some aspects of ) the female reproductive systemSéminaire d’analyse appliquée A³, Laboratoire Amiénois de Mathématique Fondamentale et Appliquée, Oct 2021, Amiens, France |
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Dynamical modeling of reaction networks. Application to biased signalingMapping Group Online Symposium, Dec 2021, Online, France |
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Modeling GPCR-induced biased signaling Towards a system biology definition of drugs selectivity9th GDR3545-GPCR international meeting, Nov 2020, Online, France. pp.1-42 |
Ovarian follicle morphogenesisCompuCell3D Multicell Virtual-Tissue Modeling Summer School, Aug 2020, Online, United States |
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Dynamical modeling of reaction networks and biased signaling. Mathematics of system biology8th Workshop of the GDR35 - Bioinformatics and biomathematical approaches to integrate the GPCR signals, Nov 2020, online, France |
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Modeling (some aspects of ) the female reproductive systemThematic Month on Mathematical Issues in Biology - Mathematics of complex systems in biology and medicine, Feb 2020, Luminy, France. pp.1-65 |
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Dynamical modeling of reaction networksMathematics of system biology2020 Workshop - ‘bioinformatics and biomathematical approaches to integrate the GPCR signal, Nov 2020, Online, France. pp.1-70 |
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Kinetic biased signaling: towards a system biology definition of drugs selectivityThematic Month on Mathematical Issues in Biology - Networks and molecular biology, Mar 2020, Luminy, France. pp.1-75 |
Stochastic model of nucleation Becker-Döring Model1ere réunion du GDR MéDynA, Oct 2019, Sainte-Montaine, France |
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Stochastic population dynamics applied to ovarian follicles developmentBioHasard 2019, Aug 2019, Rennes, France |
Dynamique de populations cellulaires structures : morphogenèse des follicules ovariensATMOSPHASE, Mar 2019, Paris, France |
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Modélisation mathématique de processus d’assemblage (protéı̈ques)1ere réunion du GDR MéDynA, Oct 2019, Sainte-Montaine, France. pp.1-35 |
Bursting in gene expression modelReverse mathematical methods for reconstructing molecular dynamics in single cell, Oct 2018, Pise, Italy. pp.1-45 |
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Using dynamical reaction network to infer drugs selectivity in pharmacologyICSB 2018, Oct 2018, Lyon, France. pp.1-66 |
Modeling (some aspects of) the female reproductive system : Gonadotropin and follicular dynamicsCEMRACS 2018, Jul 2018, Luminy, France |
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Dynamiques de populations cellulaires structurées Morphogenèse des follicules ovariensSession du GDR Mamovi 2017, 2017, Villeurbanne, France |
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Biased signaling and L1 penalizationODE Modelling in Systems Biology, Sep 2017, freibourg, Germany |
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Probalistic and piecewise deterministic models in biologyJournées MAS 2016. Phénomènes complexes et hétérogènes, Société de Mathématiques Appliquées et Industrielles (SMAI). FRA., Aug 2016, Grenoble, France. pp.1-19 |
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Time scales in a coagulation-fragmentation model, Nucleation Time in Stochastic Becker-Döring ModelWorkshop on Protein Aggregation: Biophysics and Mathematics, Jun 2017, vienna, Austria |
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Building GPCR signalisation networks. Example of the FSH receptor6.Annual Meeting of the CNRS GDR-3545 G Protein-coupled Receptors: from Physiology to Drugs (RCPG-Physio-Med), Nov 2017, Paris, France |
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Les maths de la biologie des systèmesSeminar at the Groupe de travail Bio-Maths Tours/Orléans, 2016, Tours, France |
Time scales in a coagulation-fragmentation model2. BCAM Workshop on Nonlinear Dynamics in Biological Systems, Basque Center for Applied Mathematics (BCAM). ESP., Sep 2016, Bilbao, Spain |
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Nucleation time in stochastic Becker-Doring model11. AIMS Conference on Dynamical Systems, Differential Equations and Applications, American Institute of Mathematical Science (AIMS). USA., Jul 2016, Orlando, United States. 45 diapositives |
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Stochastic coagulation-fragmentation models for the study of protein aggregation phenomenaStochastic Dynamical Systems in Biology: Numerical Methods and Applications, Isaac Newton Institute. GBR., Jan 2016, Cambridge, United Kingdom. 31 diapositives |
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Bursting in gene expression modelColloque PDMP, Agence Nationale de la Recherche (ANR). FRA., May 2015, Saint Martin de Londres, France |
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From Becker-Doring to Lifshitz-Slyozov: deriving the boundary conditionBIOMAT 2015, Instituto Nacional de Matemática Pura e Aplicada. BRA., Mar 2015, Cabo Frio, Brazil |
Accute parameter optimization leads to predictive dynamical models for systems biologyPerspectives in Environmental and Systems Biology, Structure Fédérative de Recherche (SFR). FRA., Apr 2015, Grenoble, France |
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Accurate parameter optimization leads to predictive dynamical models for systems biologyDesign, Optimization and Control in Systems and Synthetic Biology DOC'15, Ecole Normale Supérieure - Paris (ENS Paris). FRA., Nov 2015, Paris, France |
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Accurate parameter optimization leads to predictive dynamical models for systems biology23. Journée du projet CASCIMODOT, Université d'Orléans (UO). FRA. Université François Rabelais (Tours)., Dec 2015, Tours, France |
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Bursting in gene expressionColloque PDMP, Agence Nationale de la Recherche (ANR). FRA., Nov 2015, Tours, France |
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Nucleation time in coagulation-fragmentation modelsJournées Modélisation Aléatoire et Statistique de la SMAI (Société de Mathématiques Appliquées et Industrielles), Société de Mathématiques Appliquées et Industrielles (SMAI). FRA., Jun 2015, Les Karellis, France |
Stochastic single gene expression model: analytical results on bursting and rate production estimationICB Seminar, Oct 2015, Munich, France |
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Passage du discret au continu pour un modèle d'agrégation fragmentationSéminaire de Probabilités et Théorie Ergodique, ( LMPT ), Oct 2015, Tours, France |
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From Becker-Döring to Lifshitz-Slyozov: deriving the non-local boundary condition of a non-linear transport equationWorkshop on Multiscale and Hybrid Modelling in Cell and Cell Population Biology, Université Pierre et Marie Curie - Paris 6 (UPMC). Paris, FRA., Mar 2015, Paris, France. ⟨10.1051/itmconf/20150500017⟩ |
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Towards nonlinear cell population model structured by molecular content9. European Conference on Mathematical and Theoretical Biology - ECMTB14, Chalmers University of Technology. SWE., Jun 2014, Göteborg, Sweden |
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Towards nonlinear cell population model structured by molecular contentStructured Integro-Differential models in Mathematical Biology, Vienna International Science Conferences and Events Association. AUT., Apr 2014, Vienne, Austria |
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Modèle probabiliste multi-échelle de différentiation cellulaireGroupe de Travail Maths bio et santé, Laboratoire Jacques-Louis Lions, Feb 2013, Paris, France |
Temps de premier passage pour le modèle de nucléation aléatoire de Becker-DoringSéminaire du Laboratoire de Mathématiques Appliquées de Compiègne, Feb 2013, Compiègne, France |
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Modeles probabiliste de nucléationÉcole d'été Modélisation en dynamique des populations et évolution, Probabilité et EDP, Sep 2012, La Londe-Les Maures, France |
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Modeles stochastiques d'expression des genesJournées de probabilités 2012, Jun 2012, Roscoff, France |
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Modeles probabiliste de nucléation-polymérisationJournées Modélisation Mathématiques et Calcul Scientifique, Sep 2012, Villeurbanne, France |
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Stochastic self-regulated gene expression model5th International Conference on Stochastic Analysis and its Applications (ICSAA 2011), Sep 2011, Bonn, Germany |
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Modeles stochastiques d'expression des genesSéminaire des thésards du Centre de Mathématiques Appilquées de Polytechnique (CMAP), Dec 2011, Paris, France |
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Intrinsic and Extrinsic Noise Effects on Molecular Distributions in BacteriaSMB Annual Conference,, Jul 2010, Rio de Janerio, Brazil |
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Intrinsic and Extrinsic Noise Effects on Molecular Distributions in Bacteria11th International Conference on Systems Biology, (ICSB 2010), Oct 2010, Edinburgh, United Kingdom |
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Stochastic self-regulated gene expression modelFirst International workshop on Differential and Integral Equations with Applications in Biology and Medicine (DIEBM 2010), Sep 2010, Mytilène, Samos island, Greece |
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Stochastic Nucleation-Polymerization Model of Prion fibrils formationCAMBAM Seminar Serie, Apr 2010, Montreal, Canada |
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Stochastic Model of Prion's Disease: Nucleation-Polymerisation Model Part IIMathematical Biology Seminar Series at the Center for Mathematical Biology, University of Alberta, Mar 2010, Edmonton, Canada |
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KINETIC BIASED AND COMPARTMENTALIZED SIGNALING : A SYSTEM BIOLOGY APPROACH5th annual meeting of the IRN iGPCRnet, Jul 2025, Barcelone, Spain. 1 p |
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KINETIC BIASED AND COMPARTMENTALIZED SIGNALING : A SYSTEM BIOLOGY APPROACHGordon Research Conference : Phosphorylation and G-Protein Mediated Signaling Networks Mechanistic Understanding of G-Protein and Kinase Signaling Leading to Development of Novel Therapeutics, Jun 2024, Waterville Valley, United States. 1 p |
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Modeling Ovarian Folliculogenesis: Morphogenesis and Population DynamicsREPROSCIENCES 2019, Apr 2019, Toulouse, France |
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KINETIC BIASED SIGNALING : A SYSTEM BIOLOGY DEFINITION OF DRUGS SELECTIVITY8ème conférence internationale GDR3545-GPCR, Oct 2019, Montpellier, France |
The translatome of the FSH receptor reveals tha several FSH-responsive signaling effectors are co-translated in primary rat Sertoli cells2. Journées du GdR 3606 Repro, Apr 2017, Tours, France. 75 p., 2017, 2èmes Journées Scientifiques du GdR Repro |
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Multiscale modeling of the morphogenesis of ovarian follicles: a cell-dynamics based approach2. Journées du GdR 3606 Repro, Apr 2017, Tours, France. 75 p., 2017, 2èmes Journées Scientifiques du GdR Repro |
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Intégration des contraintes spatiales dans la modélisation dynamique d’un système biologique complexe : le réseau de signalisation FSHJournées d’Animation des Crédits Incitatifs du Département de Physiologie Animale et Systèmes d’Elevage (JACI Phase 2016), Apr 2016, Tours, France. , 115 p., 2016, Crédits Incitatifs financés entre 2011 et 2014 |
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Parameter estimation in signaling systemsInternational Conference on Gonadotropins & Receptors, Sep 2014, Tours, France. , 2014, ICGRIII International Conference on Gonadotropins & Receptors |
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Beta-arrestin 2 barcode of phosphorylation: impact on beta-arrestin-dependent signaling3. Annual Meeting of the GDR 3545 RCPG-PhysioMed, Oct 2014, Montpellier, France. 2014 |
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Bursting and division in a nonlinear cell population modelStochastic Biology: from Cells to Populations, May 2014, Vienne, Austria. , 1 p., 2014 |
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Getting to understand more and more a (simple?) model of stochastic gene expression7th International Congress on Industrial and Applied Mathematics (ICIAM 2011), Jul 2011, Vancouver, Canada |
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Dynamics of the prion proliferationPRION 2011, May 2011, Montreal, Canada |
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Stochastic Model of Prion's Disease: Nucleation-Polymerisation Model6th Annual McGill Biophysical Chemistry Symposium, McGill University, 2010, Montreal, Canada |
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Comprendre la signalisation cellulaire à l'aide de modèles mathématiquesMaster. France. 2020 |
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Vocabulaire et formalisme de modélisation de systèmes dynamiques en biologieDoctorat. France. 2019 |
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Chemical Reaction Network Theory, notations and selected results2016 |
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Piecewise deterministic Markov processes, applications in biology3rd cycle. Mini-cours chercheur (Laboratoire Jacques Louis-Lions, Université Paris VI), 2015, 24 p |
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Boundary value for a nonlinear transport equation emerging from a stochastic coagulation-fragmentation type model2015 |
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From a stochastic Becker-Döring model to the Lifschitz-Slyozov equation with boundary value2014 |
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Adiabatic reduction of models of stochastic gene expression with bursting2013 |
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On the bursting of gene products2011 |