Stéphane De Mita
Publications
Publications
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Population genomics of the rice landrace Acuce reveals exceptional dynamics of immune receptors2025 |
Une mutation ponctuelle et une large délétion au locus candidat d’avirulence AvrMlp7 chez la rouille du peuplier sont corrélés avec le contournement de la résistance RMlp7 exprimée par le peuplier13. Journées Jean Chevaugeon - Rencontres de Phytopathologie - Mycologie, Sep 2022, Aussois, France |
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Association of two co-occurring mutations at the AvrMlp7 avirulence locus in poplar rust during the breakdown of RMlp7 resistance geneMolecular Mechanism & Structure— Zooming in on Plant Immunity, Jul 2021, Online, Germany |
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From population genomics to molecular approaches to identify and analyse the first avirulence gene in the poplar rust fungus Melampsora larici-populinaRéunion 2020 du groupe "champignons phytopathogènes", Nov 2020, aucune (visio), France |
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Joint inference of adaptive and demographic history from temporal population genomic dataApproche Interdisciplinaire de l'Evolution Moléculaire, Nov 2019, Toulouse, France |
Towards evolutionary and functional characterization of an avirulence gene in the poplar rust fungusIUFRO Joint Conference: Genetics of Five-Needle Pines & Rusts of Forest Trees, Jul 2019, Invermere, United States |
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Joint inference of demography and selection from genomic temporal data using Approximate Bayesian ComputationALPHY 2019: Bioinformatics and Evolutionary Genomics, Feb 2019, Paris, France |
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Joint inference of demography and selection from genomic temporal data using Approximate Bayesian ComputationMathematical and Computational Evolutionary Biology, May 2019, Porquerolles, France |
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First avirulence gene in the poplar rust fungus Melampsora larici-populina, from genetic characterization to functional validation12th Effectome Meeting, Oct 2019, Lauret, France |
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From mutation to population extinction: The butterfly effect of resistance breakdown in the poplar rust fungus Melampsora larici- populinaXVIII International Congress on Molecular Plant-Microbe Interactions (IS-MPMI), Jul 2019, Glasgow, United Kingdom. pp.S1.1-S1.243 |
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Joint inference of demography and selection from genomic temporal data using Approximate Bayesian ComputationPopGroup Meeting 52, Jan 2019, Oxford, United Kingdom |
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Tracking selection in time-series population genomic data using ABC random forestsMathematical and Computational Evolutionary Biology, Jun 2018, Saint Martin de Londres, France |
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Evolutionary potential of aggressiveness related traits in the poplar rust fungus, Melampsora larici-populina12. Rencontres de Phytopathologie - Mycologie - JJC 2018 Journée Jean Chevaugeon, Jan 2018, Aussois, France |
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Evolutionary potential of aggressiveness traits in the poplar rust fungus, <i>Melampsora larici-populina</i>II Joint Congress on Evolutionary Biology, Aug 2018, Montpellier, France |
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When a plant pathogen runs down a river12. European Foundation for Plant Pathology (EFPP) ; 10. French Society for Plant Pathology (SFP) Conference, May 2017, Dunkerque Malo-les-Bains, France |
Demographic and genomic consequences of a major selective event in the poplar rustInternational Conference on Population Genomics of Fungal and Oomycete Diseases of Animals and Plants, May 2017, Ascona, Switzerland |
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Conséquences génomiques de l’adaptation à l’hôte chez l’agent de la rouille du peuplier38. colloque Le Petit Pois Déridé, réunion du Groupe de Génétique et Biologie des Populations, Jun 2017, Saclay, France. 1 p |
Genome-wide QTL mapping of aggressiveness traits in the poplar rust fungusInternational Conference on Population Genomics of Fungal and Oomycete Diseases of Animals and Plants, May 2017, Monte Verità Conference Center, Ascona, Switzerland |
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Update on Melampsora larici-populina genomics11. Rencontres de Phytopathologie - Mycologie - JJC 2016 Journée Jean Chevaugeon, Jan 2016, Aussois, France |
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Phenotypic and genomic adaptation of the ericoid fungus Oidiodendron maius to heavy metals13th European Conference on Fungal Genetics, Apr 2016, Paris, France |
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Mapping QTL of aggressiveness traits in the poplar rust fungus9eme Colloque de la Société Française de Phytopathologie, Jun 2015, Colmar, France |
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Mapping QTL of aggressiveness traits in the poplar rust fungus5. International Conference on Genetics of Tree-Parasite Interactions : Novel challenges and opportunities for resistance to pests and pathogens, Aug 2015, Orléans, France |
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Identification of candidate effectors in the poplar rust fungus <em>Melampsora larici-populina</em> through a population genomics approach28. Fungal Genetics Conference, Mar 2015, Asilomar, Pacific Grove, CA, United States |
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On the road to mapping QTLs of morphological and aggressiveness traits in the poplar rust fungusRéunion annuelle 2015 du Réseau Ecologie des Interactions Durables, Mar 2015, Lyon, France |
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Étude du déterminisme génétique des traits de vie qualitatifs et quantitatifs de Melampsora larici-populina, agent de la rouille foliaire du peuplier10. Rencontres de Phytopathologie - Mycologie - JJC 2014 Journée Jean Chevaugeon, Jan 2014, Aussois, France |
On the road to mapping QTLs of morphological and aggressiveness traits in the poplar rust fungusIUFRO Joint Meeting on Genetics of Five-Needle Pines and Rusts in Mountain Landscapes, Jun 2014, Fort Collins, United States |
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Patterns of genomic variation in the poplar rust fungus <em>Melampsora larici-populina</em> identify pathogenesis-related factorsMax-Planck-ARBRE inter-departmental workshop on plant-fungus interactions, Nov 2014, Nancy, France |
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Identification d’effecteurs de <em>Melampsora larici-populina</em> par une approche originale : de la génomique des populations à la génomique fonctionnelle10. Rencontres de Phytopathologie - Mycologie - JJC 2014 Journée Jean Chevaugeon, Jan 2014, Aussois, France. 116 p |
Genomics, transcriptomics and effectoromics of the poplar leaf rust fungus <em>Melampsora larici-populina</em>IUFRO Joint Meeting on Genetics of Five-Needle Pines and Rusts in Mountain Landscapes, Jun 2014, Fort Collins, United States |
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Effet des variations climatiques sur la variabilité des gènes déterminant la date de floraison : une étude chez Medicago truncatula34. Réunion annuelle du Groupe d’Etude de Biologie et Génétique des Populations (Petit Pois Déridé 2012), Aug 2012, Avignon, France |
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Natural variation and functional analysis provide evidence for co-evolution between pepper eIF4E and potyviral Vpg5. Solanaceae Genome Workshop, Oct 2008, Cologne, Germany |
Contrasted evolution of eIF4E genes: conservation in Arabidopsis thaliana versus selection in pepper (driven by RNA viruses?)13. International congress on molecular plant-microbe interactions, Jul 2007, Sorrento, Italy |
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Évolution contrastée des gènes eIF4E : conservation chez A. thaliana versus sélection chez le piment (exercée par les virus à ARN ?)11. Rencontres de Virologie Végétale (RVV 2007), Jan 2007, Aussois, France |
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Joint inference of demography and selection from temporal population genomic data via approximate Bayesian computationCold Spring Harbor meeting: Probabilistic Modeling in Genomics (Virtual), Apr 2021, Virtual, United States. ⟨10.6084/m9.figshare.23943312⟩ |
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Association of two co-occurring mutations at the AvrMlp7 avirulence locus in poplar rust during the breakdown of RMlp7 resistance geneIS-MPMI Congress eSymposium, Pathogen-Host Coevolution — Combating Resistance Breaking in Agriculture, Sep 2021, Online, United States. , Molecular Plant-Microbe Interactions, 34, 2021, 2021 IS-MPMI Congress: eSymposia Series Abstracts |
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Joint inference of effective population size and genetic load from temporal population genomic dataAncient Biomolecules of Plants, Animals, and Microbes 2021, Mar 2021, Virtual, United Kingdom. ⟨10.6084/m9.figshare.23943828⟩ |
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Impact of ploidy and pathogen life cycle on resistance durability18th Ecology and Evolution of Infectious Diseases, Jun 2021, (Online), France |
Genomic and phenotypic divergence among heavy metal tolerant and sensitive isolates of the ericoid fungus Oidiodendron maius15th European Conference on Fungal Genetics (ECFG15), Feb 2020, Rome, Italy |
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Evolutionary dynamics of virulence spread: effects of life cycle, genetic determinism and host resistance deploymentSex and Asex: The Genetics of Complex Life-Cycles, Jun 2019, Portland (Oregon), United States |
Genetic architecture of pathogenicity-associated traits in the poplar rust fungus, Melampsora larici-populinaEvolution 2018 Montpellier, Aug 2018, Montpellier, France |
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Genetic architecture of pathogenicity-related life history traits in the poplar rust fungus11. Rencontres de Phytopathologie - Mycologie - JJC 2016 Journée Jean Chevaugeon, Jan 2016, Aussois, France. , 96 p., 2016, 11èmes Journées Jean Chevaugeon. 25–29 janvier 2016. Centre Paul Langevin, Aussois (France) |
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Update on Melampsora larici-populina genomics13th European Conference on Fungal Genertics (ECFG13), Apr 2016, Paris, France |
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Introduction à la génétique et à la génomique des populationsMaster FAGE UE8.16 (Introduction à la génétique des populations), 2017, 68 p |
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EggLib: Evolutionary Genetics and Genomics Library2012 |
Plant Associations with Mycorrhizae and Rhizobium-Evolutionary Origins and Divergence of Strategies in Recruiting Soil MicrobesJoe C. Polacco; Christopher D. Todd. Ecological Aspects of Nitrogen Metabolism in Plants, 2011, 978-0-470-95938-1. ⟨10.1002/9780470959404⟩ |