Sebastien Santini

31
Documents

Publications

Publications

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Pacmanvirus isolated from the Lost City hydrothermal field extends the concept of transpoviron beyond the family Mimiviridae

Sébastien Santini , Audrey Lartigue , Jean-Marie Alempic , Yohann Couté , Lucid Belmudes et al.
The International Society of Microbiologial Ecology Journal, 2025, 19 (1), ⟨10.1093/ismejo/wraf002/7950992⟩
Article dans une revue hal-04886539 v1
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Functional redundancy revealed by the deletion of the mimivirus GMC-oxidoreductase genes

Jean-Marie Alempic , Hugo Bisio , Alejandro Villalta , Sébastien Santini , Audrey Lartigue et al.
microLife, 2024, 5, ⟨10.1093/femsml/uqae006⟩
Article dans une revue hal-04571293 v1
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The compact genome of the sponge Oopsacas minuta (Hexactinellida) is lacking key metazoan core genes

Sébastien Santini , Quentin Schenkelaars , Cyril Jourda , Marc Duchesne , Hassiba Belahbib et al.
BMC Biology, 2023, 21 (1), pp.139. ⟨10.1186/s12915-023-01619-w⟩
Article dans une revue hal-03757223 v1
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An Update on Eukaryotic Viruses Revived from Ancient Permafrost

Jean-Marie Alempic , Audrey Lartigue , Artemiy E Goncharov , Guido Grosse , Jens Strauss et al.
Viruses, 2023, 15 (2), pp.564. ⟨10.3390/xxxxx⟩
Article dans une revue hal-04207147 v1
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Past and present giant viruses diversity explored through permafrost metagenomics

Sofia Rigou , Sébastien Santini , Chantal Abergel , Jean-Michel Claverie , Matthieu Legendre
Nature Communications, 2022, 13 (1), pp.5853. ⟨10.1038/s41467-022-33633-x⟩
Article dans une revue hal-03807788 v1
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Metagenomic survey of the microbiome of ancient Siberian permafrost and modern Kamchatkan cryosols

Sofia Rigou , Eugène Christo-Foroux , Sébastien Santini , Artemiy Goncharov , Jens Strauss et al.
microLife, 2022, pp.uqac003. ⟨10.1093/femsml/uqac003⟩
Article dans une revue hal-03640343 v1
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Validation of predicted anonymous proteins simply using Fisher’s exact test

Jean-Michel Claverie , Sébastien Santini
Bioinformatics Advances, 2021, ⟨10.1093/bioadv/vbab034⟩
Article dans une revue hal-03463386 v1

Characterization of mollivirus Kamchatka, the First modern representative of the proposed molliviridae family of giant viruses

Eugene Christo-Foroux , Jean-Marie Alempic , Audrey Lartigue , Sebastien Santini , Karine Labadie et al.
Journal of Virology, 2020, 94 (8), pp.e01997-19. ⟨10.1128/jvi.01997-19⟩
Article dans une revue hal-04290133 v1
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Exploration of the propagation of transpovirons within Mimiviridae reveals a unique example of commensalism in the viral world

Sandra Jeudy , Lionel Bertaux , Jean-Marie Alempic , Audrey Lartigue , Matthieu Legendre et al.
The International Society of Microbiologial Ecology Journal, 2020, ⟨10.1038/s41396-019-0565-y⟩
Article dans une revue hal-02409597 v1
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Characterization of Mollivirus kamchatka , the first modern representative of the proposed Molliviridae family of giant viruses.

Eugene Christo-Foroux , Jean-Marie Alempic , Audrey Lartigue , Sébastien Santini , Karine Labadie et al.
Journal of Virology, 2020, ⟨10.1101/844274⟩
Article dans une revue hal-02464533 v1
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Unexpected invasion of miniature inverted-repeat transposable elements in viral genomes

Hua-Hao Zhang , Qiu-Zhong Zhou , Ping-Lan Wang , Xiao-Min Xiong , Andréa Luchetti et al.
Mobile DNA, 2018, 9, pp.19. ⟨10.1186/s13100-018-0125-4⟩
Article dans une revue hal-01830342 v1
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New genomic data and analyses challenge the traditional vision of animal epithelium evolution

Hassiba Belahbib , Emmanuelle Renard , Sébastien Santini , Cyril Jourda , Jean-Michel Claverie et al.
BMC Genomics, 2018, 19 (1), pp.393. ⟨10.1186/s12864-018-4715-9⟩
Article dans une revue hal-01951941 v1
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Noumeavirus replication relies on a transient remote control of the host nucleus

Elisabeth Fabre , Sandra Jeudy , Sébastien Santini , Matthieu Legendre , Mathieu Trauchessec et al.
Nature Communications, 2017, 8, pp.15087. ⟨10.1038/ncomms15087⟩
Article dans une revue hal-01534406 v1
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Benthic protists: the under-charted majority

Dominik Forster , Micah Dunthorn , Fréderic Mahé , John R. Dolan , Stéphane Audic et al.
FEMS Microbiology Ecology, 2016, 92 (8), pp.fiw120. ⟨10.1093/femsec/fiw120⟩
Article dans une revue hal-01383722 v1
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In Vivo Evolution of Bacterial Resistance in Two Cases of Enterobacter aerogenes Infections during Treatment with Imipenem

Nadège Philippe , Laure Maigre , Sébastien Santini , Elizabeth Pinet , Jean-Michel Claverie et al.
PLoS ONE, 2015, 10 (e0138828)
Article dans une revue hal-01237665 v1

Environmental characteristics of Agulhas rings affect interocean plankton transport

Emilie Villar , Gregory Farrant , Michael Follows , Laurence Garczarek , Sabrina Speich et al.
Science, 2015, 348 (6237), pp.1261447 - 1261447. ⟨10.1126/science.1261447⟩
Article dans une revue hal-01893637 v1
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Mitochondrial Genome Sequence of the Glass Sponge Oopsacas minuta

Cyril Jourda , Sébastien Santini , Caroline Rocher , André Le Bivic , Jean-Michel Claverie
Genome Announcements, 2015, 3 (4), ⟨10.1128/genomea.00823-15⟩
Article dans une revue hal-05370846 v1
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Marine protist diversity in European coastal waters and sediments as revealed by high-throughput sequencing

Ramon Massana , Angélique Gobet , Stéphane Audic , David Bass , Lucie Bittner et al.
Environmental Microbiology, 2015, 17 (10), pp.4035-4049. ⟨10.1111/1462-2920.12955⟩
Article dans une revue hal-01191731 v1
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Patterns of Rare and Abundant Marine Microbial Eukaryotes

Ramiro Logares , Stéphane Audic , David Bass , Lucie Bittner , Christophe Boutte et al.
Current Biology, 2014, 24 (8), pp.813-821. ⟨10.1016/j.cub.2014.02.050⟩
Article dans une revue hal-01149637 v1

Diversity patterns of uncultured Haptophytes unravelled by pyrosequencing in Naples Bay.

Lucie Bittner , Angélique Gobet , Stéphane Audic , Sarah Romac , Elianne S Egge et al.
Molecular Ecology, 2013, 22 (1), pp.87-101. ⟨10.1111/mec.12108⟩
Article dans une revue istex hal-00817857 v1
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Genome of Phaeocystis globosa virus PgV-16T highlights the common ancestry of the largest known DNA viruses infecting eukaryotes

Sebastien Santini , Sandra Jeudy , Julia Bartoli , Olivier Poirot , Magali Lescot et al.
Proceedings of the National Academy of Sciences of the United States of America, 2013, 110 (26), pp.10800-10805. ⟨10.1073/pnas.1303251110⟩
Article dans une revue hal-05370967 v1

Vampires in the oceans: predatory cercozoan amoebae in marine habitats

Cédric Berney , Sarah Romac , Frédéric Mahé , Sébastien Santini , Raffaele Siano et al.
The International Society of Microbiologial Ecology Journal, 2013, 7 (12), pp.2387-2399. ⟨10.1038/ismej.2013.116⟩
Article dans une revue hal-01258230 v1
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Reticulamoeba Is a Long-Branched Granofilosean (Cercozoa) That Is Missing from Sequence Databases

David Bass , Akinori Yabuki , Sébastien Santini , Sarah Romac , Cédric Berney
PLoS ONE, 2012, 7 (12), pp.e49090. ⟨10.1371/journal.pone.0049090⟩
Article dans une revue hal-01258242 v1
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Diversity patterns and activity of uncultured marine heterotrophic flagellates unveiled with pyrosequencing

Ramiro Logares , Stéphane Audic , Sébastien Santini , Massimo C. Pernice , Colomban de Vargas et al.
The International Society of Microbiologial Ecology Journal, 2012, 6 (10), pp.1823-1833. ⟨10.1038/ismej.2012.36⟩
Article dans une revue hal-01258237 v1
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The Conserved Candida albicans CA3427 Gene Product Defines a New Family of Proteins Exhibiting the Generic Periplasmic Binding Protein Structural Fold

Sébastien Santini , Jean-Michel Claverie , Nicolas Mouz , Tristan Rousselle , Caroline Maza et al.
PLoS ONE, 2011, 6 (4), pp.e18528. ⟨10.1371/journal.pone.0018528⟩
Article dans une revue hal-05370973 v1
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Structural characterization of CA1462, the Candida albicans thiamine pyrophosphokinase

Sébastien Santini , Vincent Monchois , Nicolas Mouz , Cécile Sigoillot , Tristan Rousselle et al.
BMC Structural Biology, 2008, 8 (1), pp.33. ⟨10.1186/1472-6807-8-33⟩
Article dans une revue hal-05371026 v1
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Ir-LBP, an Ixodes ricinus Tick Salivary LTB4-Binding Lipocalin, Interferes with Host Neutrophil Function

Jérôme Beaufays , Benoît Adam , Catherine Menten-Dedoyart , Laurence Fievez , Amélie Grosjean et al.
PLoS ONE, 2008, 3 (12), pp.e3987. ⟨10.1371/journal.pone.0003987⟩
Article dans une revue hal-05371013 v1
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Ixodes ricinus Tick Lipocalins: Identification, Cloning, Phylogenetic Analysis and Biochemical Characterization

Jérôme Beaufays , Benoît Adam , Yves Decrem , Pierre-Paul Prévôt , Sébastien Santini et al.
PLoS ONE, 2008, 3 (12), pp.e3941. ⟨10.1371/journal.pone.0003941⟩
Article dans une revue hal-05371017 v1

In Silico Assembly of Alzheimer's Aβ<sub>16</sub><sub>-</sub><sub>22</sub> Peptide into β-Sheets

Sébastien Santini , Normand Mousseau , Philippe Derreumaux
Journal of the American Chemical Society, 2004, 126 (37), pp.11509 - 11516. ⟨10.1021/ja047286i⟩
Article dans une revue istex hal-05371053 v1