Sebastien Santini

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Documents

Publications

Publications

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Pacmanvirus isolated from the Lost City hydrothermal field extends the concept of transpoviron beyond the family Mimiviridae

Sébastien Santini , Audrey Lartigue , Jean-Marie Alempic , Yohann Couté , Lucid Belmudes et al.

The International Society of Microbiologial Ecology Journal, 2025, 19 (1), ⟨10.1093/ismejo/wraf002/7950992⟩

Article dans une revue hal-04886539v1
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Uncovering enzymatic tools promoting lignocellulose breakdown in the anaerobic bacterium Ruminiclostridium cellulolyticum

Nicolas Vita , Marion Holmière , Felipe Mejia-Otalvaro , Fabian Debard , Lison Degeilh et al.

Communications Biology, 2025, 9, pp.24. ⟨10.1038/s42003-025-09287-y⟩

Article dans une revue hal-05441823v1
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Functional redundancy revealed by the deletion of the mimivirus GMC-oxidoreductase genes

Jean-Marie Alempic , Hugo Bisio , Alejandro Villalta , Sébastien Santini , Audrey Lartigue et al.

microLife, 2024, 5, ⟨10.1093/femsml/uqae006⟩

Article dans une revue hal-04571293v1
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The compact genome of the sponge Oopsacas minuta (Hexactinellida) is lacking key metazoan core genes

Sébastien Santini , Quentin Schenkelaars , Cyril Jourda , Marc Duchesne , Hassiba Belahbib et al.

BMC Biology, 2023, 21 (1), pp.139. ⟨10.1186/s12915-023-01619-w⟩

Article dans une revue hal-03757223v1
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An Update on Eukaryotic Viruses Revived from Ancient Permafrost

Jean-Marie Alempic , Audrey Lartigue , Artemiy E Goncharov , Guido Grosse , Jens Strauss et al.

Viruses, 2023, 15 (2), pp.564. ⟨10.3390/xxxxx⟩

Article dans une revue hal-04207147v1
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Past and present giant viruses diversity explored through permafrost metagenomics

Sofia Rigou , Sébastien Santini , Chantal Abergel , Jean-Michel Claverie , Matthieu Legendre

Nature Communications, 2022, 13 (1), pp.5853. ⟨10.1038/s41467-022-33633-x⟩

Article dans une revue hal-03807788v1
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Metagenomic survey of the microbiome of ancient Siberian permafrost and modern Kamchatkan cryosols

Sofia Rigou , Eugène Christo-Foroux , Sébastien Santini , Artemiy Goncharov , Jens Strauss et al.

microLife, 2022, pp.uqac003. ⟨10.1093/femsml/uqac003⟩

Article dans une revue hal-03640343v1
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Validation of predicted anonymous proteins simply using Fisher’s exact test

Jean-Michel Claverie , Sébastien Santini

Bioinformatics Advances, 2021, ⟨10.1093/bioadv/vbab034⟩

Article dans une revue hal-03463386v1

Characterization of mollivirus Kamchatka, the First modern representative of the proposed molliviridae family of giant viruses

Eugene Christo-Foroux , Jean-Marie Alempic , Audrey Lartigue , Sebastien Santini , Karine Labadie et al.

Journal of Virology, 2020, 94 (8), pp.e01997-19. ⟨10.1128/jvi.01997-19⟩

Article dans une revue hal-04290133v1
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Characterization of Mollivirus kamchatka , the first modern representative of the proposed Molliviridae family of giant viruses.

Eugene Christo-Foroux , Jean-Marie Alempic , Audrey Lartigue , Sébastien Santini , Karine Labadie et al.

Journal of Virology, 2020, ⟨10.1101/844274⟩

Article dans une revue hal-02464533v1
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Exploration of the propagation of transpovirons within Mimiviridae reveals a unique example of commensalism in the viral world

Sandra Jeudy , Lionel Bertaux , Jean-Marie Alempic , Audrey Lartigue , Matthieu Legendre et al.

The International Society of Microbiologial Ecology Journal, 2020, ⟨10.1038/s41396-019-0565-y⟩

Article dans une revue hal-02409597v1
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Unexpected invasion of miniature inverted-repeat transposable elements in viral genomes

Hua-Hao Zhang , Qiu-Zhong Zhou , Ping-Lan Wang , Xiao-Min Xiong , Andréa Luchetti et al.

Mobile DNA, 2018, 9, pp.19. ⟨10.1186/s13100-018-0125-4⟩

Article dans une revue hal-01830342v1
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New genomic data and analyses challenge the traditional vision of animal epithelium evolution

Hassiba Belahbib , Emmanuelle Renard , Sébastien Santini , Cyril Jourda , Jean-Michel Claverie et al.

BMC Genomics, 2018, 19 (1), pp.393. ⟨10.1186/s12864-018-4715-9⟩

Article dans une revue hal-01951941v1
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Noumeavirus replication relies on a transient remote control of the host nucleus

Elisabeth Fabre , Sandra Jeudy , Sébastien Santini , Matthieu Legendre , Mathieu Trauchessec et al.

Nature Communications, 2017, 8, pp.15087. ⟨10.1038/ncomms15087⟩

Article dans une revue hal-01534406v1
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Benthic protists: the under-charted majority

Dominik Forster , Micah Dunthorn , Fréderic Mahé , John R. Dolan , Stéphane Audic et al.

FEMS Microbiology Ecology, 2016, 92 (8), pp.fiw120. ⟨10.1093/femsec/fiw120⟩

Article dans une revue hal-01383722v1

Environmental characteristics of Agulhas rings affect interocean plankton transport

Emilie Villar , Gregory Farrant , Michael J. Follows , Laurence Garczarek , Sabrina Speich et al.

Science, 2015, 348 (6237), pp.1261447 - 1261447. ⟨10.1126/science.1261447⟩

Article dans une revue hal-01893637v1
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In Vivo Evolution of Bacterial Resistance in Two Cases of Enterobacter aerogenes Infections during Treatment with Imipenem

Nadège Philippe , Laure Maigre , Sébastien Santini , Elizabeth Pinet , Jean-Michel Claverie et al.

PLoS ONE, 2015, 10 (e0138828)

Article dans une revue hal-01237665v1
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The 474-Kilobase-Pair Complete Genome Sequence of CeV-01B, a Virus Infecting Haptolina ( Chrysochromulina ) ericina (Prymnesiophyceae)

Lucie Gallot-Lavallée , António Pagarete , Matthieu Legendre , Sebastien Santini , Ruth-Anne Sandaa et al.

Genome Announcements, 2015, 3 (6), ⟨10.1128/genomea.01413-15⟩

Article dans une revue hal-05370823v1
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Mitochondrial Genome Sequence of the Glass Sponge Oopsacas minuta

Cyril Jourda , Sébastien Santini , Caroline Rocher , André Le Bivic , Jean-Michel Claverie

Genome Announcements, 2015, 3 (4), ⟨10.1128/genomea.00823-15⟩

Article dans une revue hal-05370846v1
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Marine protist diversity in European coastal waters and sediments as revealed by high-throughput sequencing

Ramon Massana , Angélique Gobet , Stéphane Audic , David Bass , Lucie Bittner et al.

Environmental Microbiology, 2015, 17 (10), pp.4035-4049. ⟨10.1111/1462-2920.12955⟩

Article dans une revue hal-01191731v1
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Draft Genome Sequence of an Alphaproteobacterium Associated with the Mediterranean Sponge Oscarella lobularis

Cyril Jourda , Sébastien Santini , Caroline Rocher , André Le Bivic , Jean-Michel Claverie

Genome Announcements, 2015, 3 (5), ⟨10.1128/genomeA.00977-15.⟩

Article dans une revue hal-05370830v1
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Patterns of Rare and Abundant Marine Microbial Eukaryotes

Ramiro Logares , Stéphane Audic , David Bass , Lucie Bittner , Christophe Boutte et al.

Current Biology, 2014, 24 (8), pp.813-821. ⟨10.1016/j.cub.2014.02.050⟩

Article dans une revue hal-01149637v1

Vampires in the oceans: predatory cercozoan amoebae in marine habitats

Cédric Berney , Sarah Romac , Frédéric Mahé , Sébastien Santini , Raffaele Siano et al.

The International Society of Microbiologial Ecology Journal, 2013, 7 (12), pp.2387-2399. ⟨10.1038/ismej.2013.116⟩

Article dans une revue hal-01258230v1
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Genome of Phaeocystis globosa virus PgV-16T highlights the common ancestry of the largest known DNA viruses infecting eukaryotes

Sebastien Santini , Sandra Jeudy , Julia Bartoli , Olivier Poirot , Magali Lescot et al.

Proceedings of the National Academy of Sciences of the United States of America, 2013, 110 (26), pp.10800-10805. ⟨10.1073/pnas.1303251110⟩

Article dans une revue hal-05370967v1

Diversity patterns of uncultured Haptophytes unravelled by pyrosequencing in Naples Bay.

Lucie Bittner , Angélique Gobet , Stéphane Audic , Sarah Romac , Elianne S Egge et al.

Molecular Ecology, 2013, 22 (1), pp.87-101. ⟨10.1111/mec.12108⟩

Article dans une revue istex hal-00817857v1
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Reticulamoeba Is a Long-Branched Granofilosean (Cercozoa) That Is Missing from Sequence Databases

David Bass , Akinori Yabuki , Sébastien Santini , Sarah Romac , Cédric Berney

PLoS ONE, 2012, 7 (12), pp.e49090. ⟨10.1371/journal.pone.0049090⟩

Article dans une revue hal-01258242v1
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Diversity patterns and activity of uncultured marine heterotrophic flagellates unveiled with pyrosequencing

Ramiro Logares , Stéphane Audic , Sébastien Santini , Massimo C. Pernice , Colomban de Vargas et al.

The International Society of Microbiologial Ecology Journal, 2012, 6 (10), pp.1823-1833. ⟨10.1038/ismej.2012.36⟩

Article dans une revue hal-01258237v1
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Breaking the 1000-gene barrier for Mimivirus using ultra-deep genome and transcriptome sequencing

Matthieu Legendre , Sébastien Santini , Alain Rico , Chantal Abergel , Jean-Michel Claverie

Virology Journal, 2011, 8 (1), pp.99. ⟨10.1186/1743-422x-8-99⟩

Article dans une revue hal-05370980v1
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The Conserved Candida albicans CA3427 Gene Product Defines a New Family of Proteins Exhibiting the Generic Periplasmic Binding Protein Structural Fold

Sébastien Santini , Jean-Michel Claverie , Nicolas Mouz , Tristan Rousselle , Caroline Maza et al.

PLoS ONE, 2011, 6 (4), pp.e18528. ⟨10.1371/journal.pone.0018528⟩

Article dans une revue hal-05370973v1

Structural features conferring dual Geranyl/Farnesyl diphosphate synthase activity to an aphid prenyltransferase

Sophie Vandermoten , Sébastien Santini , Éric Haubruge , Fabien Heuze , Frédéric Francis et al.

Insect Biochemistry and Molecular Biology, 2009, 39 (10), pp.707 - 716. ⟨10.1016/j.ibmb.2009.08.007⟩

Article dans une revue istex hal-05370989v1
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Ixodes ricinus Tick Lipocalins: Identification, Cloning, Phylogenetic Analysis and Biochemical Characterization

Jérôme Beaufays , Benoît Adam , Yves Decrem , Pierre-Paul Prévôt , Sébastien Santini et al.

PLoS ONE, 2008, 3 (12), pp.e3941. ⟨10.1371/journal.pone.0003941⟩

Article dans une revue hal-05371017v1
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Structural characterization of CA1462, the Candida albicans thiamine pyrophosphokinase

Sébastien Santini , Vincent Monchois , Nicolas Mouz , Cécile Sigoillot , Tristan Rousselle et al.

BMC Structural Biology, 2008, 8 (1), pp.33. ⟨10.1186/1472-6807-8-33⟩

Article dans une revue hal-05371026v1
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Ir-LBP, an Ixodes ricinus Tick Salivary LTB4-Binding Lipocalin, Interferes with Host Neutrophil Function

Jérôme Beaufays , Benoît Adam , Catherine Menten-Dedoyart , Laurence Fievez , Amélie Grosjean et al.

PLoS ONE, 2008, 3 (12), pp.e3987. ⟨10.1371/journal.pone.0003987⟩

Article dans une revue hal-05371013v1

In Silico Assembly of Alzheimer's Aβ<sub>16</sub><sub>-</sub><sub>22</sub> Peptide into β-Sheets

Sébastien Santini , Normand Mousseau , Philippe Derreumaux

Journal of the American Chemical Society, 2004, 126 (37), pp.11509 - 11516. ⟨10.1021/ja047286i⟩

Article dans une revue istex hal-05371053v1

Impact of the Tail and Mutations G131V and M129V on Prion Protein Flexibility

Sébastien Santini , Jean‐baptiste Claude , Stéphane Audic , Philippe Derreumaux

Proteins - Structure, Function and Bioinformatics, 2003, 51 (2), pp.258-265. ⟨10.1002/prot.10348⟩

Article dans une revue istex hal-05371075v1