Simon ROQUES

29
Documents

Publications

Publications

Farm conditions shape microbial communities and their association with methane intensity in dairy cattle: insights from the rumen microbiome at the community level

Simon Roques , Lisanne Koning , Alex Bossers , Sanne van Gastelen , Dirkjan Schokker et al.
Frontiers in Microbiomes, 2025, 4, ⟨10.3389/frmbi.2025.1540197⟩
Article dans une revue hal-05116257 v1
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Recent Advances in Enteric Methane Mitigation and the Long Road to Sustainable Ruminant Production

Simon Roques , Gonzalo Martinez-Fernandez , Yuliaxis Ramayo-Caldas , Milka Popova , Stuart Denman et al.
Annual Review of Animal Biosciences, 2024, 12, pp.321-343. ⟨10.1146/annurev-animal-021022-024931⟩
Article dans une revue hal-04342398 v1
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New alternative ingredients and genetic selection are the next game changers in rainbow trout nutrition: a metabolomics appraisal

Simon Roques , Catherine Deborde , Sandrine Skiba-Cassy , Françoise Médale , Mathilde Dupont-Nivet et al.
Scientific Reports, 2023, 13, pp.19634. ⟨10.1038/s41598-023-46809-2⟩
Article dans une revue hal-04305424 v1
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Influence of agroecology practices on rumen microbiota associated with methane emission in dairy cattle

Simon Roques , Lisanne Koning , Johan van Riel , Alex Bossers , Dirkjan Schokker et al.
Animal Feed Science and Technology, 2023, 303, pp.115716. ⟨10.1016/j.anifeedsci.2023.115716⟩
Article dans une revue hal-04182753 v1
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Effect of Feeding 0.8% Dried Powdered Chlorella vulgaris Biomass on Growth Performance, Immune Response, and Intestinal Morphology during Grower Phase in Broiler Chickens

Simon Roques , Sietse-Jan Koopmans , Annemarie Mens , Jan van Harn , Marinus van Krimpen et al.
Animals, 2022, 12 (9), pp.1114. ⟨10.3390/ani12091114⟩
Article dans une revue hal-04318596 v1
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PeakForest: a multi-platform digital infrastructure for interoperable metabolite spectral data and metadata management

Nils Paulhe , Cécile Canlet , Annelaure Damont , Lindsay Peyriga , Stéphanie Durand et al.
Metabolomics, 2022, 18 (6), pp.40. ⟨10.1007/s11306-022-01899-3⟩
Article dans une revue hal-03695453 v1
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Critical assessment of metabolism and related growth and quality traits in trout fed spirulina-supplemented plant-based diets

Simon Roques , Catherine Deborde , Sandrine Skiba-Cassy , Olivier Cala , Yann Marchand et al.
Article dans une revue hal-03592312 v1

Proton-NMR Metabolomics of Rainbow Trout Fed a Plant-Based Diet Supplemented with Graded Levels of a Protein-Rich Yeast Fraction Reveal Several Metabolic Processes Involved in Growth

Simon Roques , Catherine Deborde , Nadege Richard , Yann Marchand , Laurence Larroquet et al.
Journal of Nutrition, 2020, 150 (9), pp.2268-2277. ⟨10.1093/jn/nxaa206⟩
Article dans une revue hal-02927022 v1
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Integrative Metabolomics for Assessing the Effect of Insect (Hermetia illucens) Protein Extract on Rainbow Trout Metabolism

Simon Roques , Catherine Deborde , Laurence Guimas , Yann Marchand , Nadege Richard et al.
Metabolites, 2020, 10 (3), pp.83. ⟨10.3390/metabo10030083⟩
Article dans une revue hal-02570723 v1
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Metabolomics and fish nutrition: a review in the context of sustainable feed development

Simon Roques , Catherine Deborde , Nadege Richard , Sandrine Skiba-Cassy , Annick Moing et al.
Reviews in Aquaculture, 2020, 112 (1), pp.261-282. ⟨10.1111/raq.12316⟩
Article dans une revue (article de synthèse) hal-02141403 v1
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Characterizing alternative feeds for rainbow trout (O. mykiss) by 1 H NMR metabolomics

Simon Roques , Catherine Deborde , Nadège Richard , Luce Sergent , Francis Kurz et al.
Metabolomics, 2018, 14 (12), pp.155. ⟨10.1007/s11306-018-1454-5⟩
Article dans une revue hal-02141406 v1

Exploration des relations entre les archées méthanogènes et les bactéries du rumen dans la production de méthane chez les ruminants

Charlaine Dechamp , Gérard Xavier Gbenou , Christelle Blavignac , Caroline Vachias , Aurélie Dehornoy et al.
21ème Rencontre des Microbiologistes du Pôle Clermontois, Apr 2025, Clermont-ferrand, France
Communication dans un congrès hal-05116308 v1

Multi-omic investigation to decipher host-microbiota relationships in dairy cattle in the context of methane inhibition

Simon Roques , Jérémy Tournayre , Paul Samir Dou , Hamid Boudra , Benedict Yanibada et al.
14th International Gut Microbiology Symposium, Jun 2025, Clermont-Ferrand, France
Communication dans un congrès hal-05116318 v1

Le microbiote des ruminants tiraillé entre attentes de durabilité et de performance des élevages

Simon Roques
Des microbiotes de l'environnement au microbiote intestinal, Mar 2025, Paris, France
Communication dans un congrès hal-05116310 v1
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Some Advances in Research in Ruminant Nutrition

Pierre Nozière , Donato Andueza , René Baumont , Gonzalo Cantalapiedra-Hijar , Paul Dou et al.
Sommet de l'Elevage 2024, Oct 2024, Cournon d'Auvergne, France
Communication dans un congrès hal-04829762 v1
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RMN métabolomique, aliments & nutrition : quelques exemples de la plateforme Métabolome-MetaboHUB -Bordeaux

Catherine Deborde , Blandine Madji Hounoum , Simon Roques , Daniel Jacob , Mickaël Maucourt et al.
Animation scientifique : La Résonance Magnétique Nucléaire dans tous ses états…., UR370 QuaPA et PF AgroResonance, INRAE, Jun 2021, distanciel, France
Communication dans un congrès hal-03728319 v1
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NMR-based metabolomics workflow for quality and effect assessment of alternative plant-based diets in rainbow trout.

Catherine Deborde , Blandine Madji Hounoum , Daniel Jacob , Mickael Maucourt , Simon Roques et al.
11èmes JS du Réseau Francophone de Métabolomique et Fluxomique, RFMF, May 2018, Liège, Belgium
Communication dans un congrès hal-03058513 v1

NMR-based metabolomics at Bordeaux Metabolome Facility: 4 short stories

Catherine Deborde , Daniel Jacob , Simon Roques , Léa Roch , Anaïs Clave et al.
A Franco-Israeli Symposium in Magnetic Resonance, Jan 2019, Rehovot, Israel
Communication dans un congrès hal-02786826 v1

Exploring the adaptation of rainbow trout metabolome to novel aquafeeds by H-NMR metabolomics

Simon Roques , Catherine Deborde , Nadege Richard , Sandrine Skiba-Cassy , Annick Moing et al.
Metabolomics 2019. 15. Annual Conference of the Metabolomics Society, Jun 2019, La Haye, Netherlands
Communication dans un congrès hal-02154627 v1
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1H-NMR metabolomic investigation of the effect of alternative diets on rainbow trout plasma profiles

Simon Roques , Catherine Deborde , Nadège Richard , Sandrine Skiba-Cassy , Annick Moing et al.
World Aquaculture 2018, European Aquaculture Society (EAS)., Aug 2018, Montpellier, France. 848 p
Communication dans un congrès hal-01913018 v1

Integrative 1H-NMR metabolomic investigation of the effect of alternative diets on rainbow trout plasma

Simon Roques , Catherine Deborde , Nadège Richard , Sandrine Skiba-Cassy , Annick Moing et al.
18. ISFNF International Symposium on Fish Nutrition and Feeding "40 years of research in fish nutrition", Jun 2018, Las Palmas de Gran Canaria, Spain
Communication dans un congrès hal-01831458 v1
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THE RELATIONSHIP BETWEEN BUCCAL MICROBIOTA AND METHANE EMISSION OF HOLSTEIN FRIESIAN DAMS AND THEIR CALVES

Simon Roques , Sanne Van Gastelen , Harmen Van Laar , Soumya Kanti Kar , Alex Bosser et al.
13th International Gut Microbiology Symposium, Jun 2023, Aberdeen (Ecosse), United Kingdom.
Poster de conférence hal-04318618 v1

Apport de la métabolomique par 1H-RMN pour le développement de nouveaux aliments chez la truite arc en ciel

Simon Roques , Catherine Deborde , Nadège Richard , Sandrine Skiba-Cassy , Annick Moing et al.
6. Journées de la Recherche Filière Piscicole, Jul 2019, Paris, France. , 2019, 6èmes Journées de la Recherche Filière Piscicole
Poster de conférence hal-02179541 v1
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Metabolomic application in fish nutrition: profiling novel aquaculture feeds and assessing their impact on rainbow trout plasma

Simon Roques , Catherine Deborde , Nadège Richard , Sandrine Skiba-Cassy , Annick Moing et al.
EUROMAR - European Magnetic Resonance Meeting, Jul 2018, Nantes, France. 2018
Poster de conférence hal-02161578 v1

NMR-based metabolomics workflow for characterization and effect assessment of alternative plant-based diets on plasma and microbiote in rainbow trout

Catherine Deborde , Blandine Madji Hounoum , Daniel Jacob , Mickael Maucourt , Simon Roques et al.
EUROMAR - European Magnetic Resonance Meeting, Jul 2018, Nantes, France. 2018
Poster de conférence hal-02160639 v1

Evaluation of alternative diets for farmed rainbow trout (Oncorhynchus mykiss) by H-NMR metabolomics

Simon Roques , Catherine Deborde , Annick Moing , N. Richard , Y. Marchand et al.
Aquaculture Europe 2017, Oct 2017, Dubrovnik, Croatia. 2017
Poster de conférence hal-01901341 v1

Plant Metabolomics at Bordeaux Metabolome Facility, a member of MetaboHUB and PHENOME IA projects. Tools and Applications

Catherine Deborde , Patricia Ballias , Camille Bénard , Stéphane Bernillon , Thierry Berton et al.
10. journées scientifiques du Réseau Francophone de Métabolomique et Fluxomique RFMF 2016, May 2016, Montpellier, France. 2016
Poster de conférence hal-02743906 v1

Plant Metabolomics at Bordeaux Metabolome Facility, a member of MetaboHUB and PHENOME IA projects. Tools and Applications

Catherine Deborde , Patricia Ballias , Camille Bénard , Stéphane Bernillon , Thierry Berton et al.
Metabolomics 2016. 12. Annual Conference of the Metabolomics Society, Jun 2016, Dublin, Ireland. 2016
Poster de conférence hal-02741696 v1
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Preliminary results of the first NMR ring test inside MetaboHUB IA project on NMR acquisition and annotation of the NIST standard reference material of human plasma (SRM1950)

Catherine Deborde , Mickael Maucourt , Simon Roques , Dominique Rolin , Annick Moing et al.
10. journées scientifiques du Réseau Francophone de Métabolomique et Fluxomique RFMF 2016, May 2016, Montpellier, France. 2016
Poster de conférence hal-01886393 v1