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Veronique Brunaud

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RNAseq based variant dataset in a black poplar association panel

Odile Rogier , Aurélien Chateigner , Marie-Claude Lesage-Descauses , Claire Mandin , Véronique Brunaud
BMC Research Notes, 2023, 16, pp.248. ⟨10.1186/s13104-023-06521-w⟩
Journal articles hal-04225417v1

An mTRAN-mRNA interaction mediates mitochondrial translation initiation in plants

Huy Cuong Tran , Vivian Schmitt , Sbatie Lama , Chuande Wang , Alexandra Launay-Avon
Science, 2023, 381 (6661), ⟨10.1126/science.adg0995⟩
Journal articles hal-04194228v1
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Evolutionary analyses and expression patterns of TCP genes in Ranunculales

Catherine Damerval , Carmine Claudot , Martine Le Guilloux , Natalia Conde e Silva , Véronique Brunaud
Frontiers in Plant Science, 2022, 13, pp.1055196. ⟨10.3389/fpls.2022.1055196⟩
Journal articles hal-04174202v1
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Apical dominance control by TAR-YUC-mediated auxin biosynthesis is a deep homology of land plants

Mattias Thelander , Katarina Landberg , Arthur Muller , Gladys Cloarec , Nik Cunniffe
Current Biology - CB, 2022, 32 (17), pp.P3838-3846.E5. ⟨10.1016/j.cub.2022.06.064⟩
Journal articles hal-03766725v1
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Strive or thrive: Trends in Phytophthora capsici gene expression in partially resistant pepper

Gaëtan Maillot , Emmanuel Szadkowski , Anne Massire , Véronique Brunaud , Guillem Rigaill
Frontiers in Plant Science, 2022, 13 (980587), pp.1-19. ⟨10.3389/fpls.2022.980587⟩
Journal articles hal-03908269v1
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A comprehensive map of preferentially located motifs reveals distinct proximal cis -regulatory elements in plants

Julien Rozière , Cécile Guichard , Véronique Brunaud , Marie-Laure Martin , Sylvie Coursol
Frontiers in Plant Science, 2022, 13, pp.976371. ⟨10.3389/fpls.2022.976371⟩
Journal articles hal-04400803v1
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Transcriptome Analysis Reveals Putative Target Genes of APETALA3-3 During Early Floral Development in Nigella damascena L.

Yves Deveaux , Natalia Conde E Silva , Domenica Manicacci , Martine Le Guilloux , Véronique Brunaud
Frontiers in Plant Science, 2021, 12, ⟨10.3389/fpls.2021.660803⟩
Journal articles hal-03312790v1

A case of gene fragmentation in plant mitochondria fixed by the selection of a compensatory restorer of fertility-like PPR gene

Tan-Trung Nguyen , Noelya Planchard , Jennifer Dahan , Nadège Arnal , Sandrine Balzergue
Molecular Biology and Evolution, 2021, 38 (8), pp.3445-3458. ⟨10.1093/molbev/msab115⟩
Journal articles hal-03236517v1
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RNAi suppression of DNA methylation affects the drought stress response and genome integrity in transgenic poplar

Mamadou-Dia Sow , Anne‐laure Le Gac , Régis Fichot , Sophie Lanciano , Alain Delaunay
New Phytologist, 2021, 232 (1), pp.80-97. ⟨10.1111/nph.17555⟩
Journal articles hal-03292338v1

Root Silicon Treatment Modulates the Shoot Transcriptome in Brassica napus L. and in Particular Upregulates Genes Related to Ribosomes and Photosynthesis

Philippe Etienne , Jacques Trouverie , Cylia Haddad , Mustapha Arkoun , Jean-Claude Yvin
Journal articles hal-03150377v1
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Gene expression predictions and networks in natural populations supports the omnigenic theory

Aurélien Chateigner , Marie-Claude Lesage-Descauses , Odile Rogier , Véronique Jorge , Jean-Charles Leplé
BMC Genomics, 2020, 21 (1), pp.1-16. ⟨10.1186/s12864-020-06809-2⟩
Journal articles hal-02902844v1
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Plant nitrogen supply affects the Botrytis cinerea infection process and modulates known and novel virulence factors

Marie‐christine Soulie , Shamsuddin Mia Koka , Kévin Floch , Baptiste Vancostenoble , Deborah Barbe
Molecular Plant Pathology, 2020, 21, pp.1436-1450. ⟨10.1111/mpp.12984⟩
Journal articles hal-02946967v1
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Transcriptomics at Maize Embryo/Endosperm Interfaces Identifies a Transcriptionally Distinct Endosperm Subdomain Adjacent to the Embryo Scutellum

Nicolas Doll , Jérémy Just , Véronique Brunaud , José Caïus , Aurélie Grimault
The Plant cell, 2020, 32 (4), pp.833-852. ⟨10.1105/tpc.19.00756⟩
Journal articles hal-03065555v1

Silicon supply affects the root transcriptome of Brassica napus L.

Cylia Haddad , Jacques Trouverie , Mustapha Arkoun , Jean-Claude Yvin , José Caius
Planta, 2019, 249 (5), pp.1645-1651. ⟨10.1007/s00425-019-03120-7⟩
Journal articles hal-02184363v1
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A systems biology approach uncovers a gene co-expression network associated with cell wall degradability in maize

Clément Cuello , Aurélie Baldy , Véronique Brunaud , Johann Joets , Etienne Delannoy
PLoS ONE, 2019, 14 (12), pp.e0227011. ⟨10.1371/journal.pone.0227011⟩
Journal articles hal-02429157v1
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Extensive nuclear reprogramming and endoreduplication in mature leaf during floral induction

Stefania del Prete , Anne Molitor , Delphine Charif , Nadia Bessoltane-Bentahar , Ludivine Soubigou-Taconnat
BMC Plant Biology, 2019, 19, pp.135. ⟨10.1186/s12870-019-1738-6⟩
Journal articles hal-02618994v1
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Accuracy of RNAseq based SNP discovery and genotyping in Populus nigra

Odile Rogier , Aurélien Chateigner , Souhila Amanzougarene , Marie-Claude Lesage Descauses , Sandrine Balzergue
BMC Genomics, 2018, 19, pp.909. ⟨10.1186/s12864-018-5239-z⟩
Journal articles hal-02622249v1
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Combining laser-assisted microdissection (LAM) and RNA-seq allows to perform a comprehensive transcriptomic analysis of epidermal cells of Arabidopsis embryo

Kaori Sakai , Ludivine Taconnat , Néro Borrega , Jennifer Yansouni , Véronique Brunaud
Plant Methods, 2018, 14, pp.10. ⟨10.1186/s13007-018-0275-x⟩
Journal articles hal-02625394v1
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Transcriptome reprogramming due to the introduction of a barley telosome into bread wheat affects more barley genes than wheat

Elodie Rey , Michaël M. Abrouk , Gabriel Keeble-Gagnère , Miroslava Karafiatova , Jan Vrána
Plant Biotechnology Journal, 2018, 16 (10), pp.1767-1777. ⟨10.1111/pbi.12913⟩
Journal articles hal-02621747v1
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AgroDataRing: Une infrastructure partagée et mutualisée pour le stockage longue durée

Pierre Adenot , Stéphane Bansard , David Benaben , Veronique Brunaud , Christophe Caron
Cahier des Techniques de l'INRA, 2018, pp.1-7
Journal articles hal-02097192v1
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Nod Factor Effects on Root Hair-Specific Transcriptome of Medicago truncatula: Focus on Plasma Membrane Transport Systems and Reactive Oxygen Species Networks.

Isabelle Damiani , Alice Drain , Marjorie Guichard , Sandrine Balzergue , Alexandre Boscari
Frontiers in Plant Science, 2016, 7, pp.794. ⟨10.3389/fpls.2016.00794⟩
Journal articles hal-01354648v1

Synthetic data sets for the identification of key ingredients for RNA-seq differential analysis

Guillem Rigaill , Sandrine Balzergue , Véronique Brunaud , Eddy Blondet , Andrea Rau
Briefings in Bioinformatics, 2016, 19 (1), pp.65-76. ⟨10.1093/bib/bbw092⟩
Journal articles hal-01595551v1

A Conserved Cytochrome P450 Evolved in Seed Plants Regulates Flower Maturation

Zhenhua Liu , Benoit Boachon , Raphaël Lugan , Raquel Tavares , Mathieu Erhardt
Molecular Plant, 2015, 8 (12), pp.1751-1765. ⟨10.1016/j.molp.2015.09.002⟩
Journal articles hal-02437969v1
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GEM2Net: from gene expression modeling to -omics networks, a new CATdb module to investigate Arabidopsis thaliana genes involved in stress response

Rim Zaag , Jean-Philippe Tamby , Cecile Guichard , Zakia Tariq , Guillem Rigaill
Nucleic Acids Research, 2015, 43 (Database issue), pp.D1010-D1017. ⟨10.1093/nar/gku1155⟩
Journal articles hal-01137554v1

A conserved cytochrome P450 evolved in seed plants regulates flower development

Z. Liu , B. Boachon , R. Lugan , R. Tavares , M. Erhardt
Molecular Plant, 2015, 8, pp.1751-1765
Journal articles hal-01252970v1
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The RNA helicases AtMTR4 and HEN2 target specific subsets of nuclear transcripts for degradation by the nuclear exosome in Arabidopsis thaliana

Heike Lange , Hélène Zuber , François M. Sement , Johanna Chicher , Lauriane Kuhn
PLoS Genetics, 2014, 10 (8), pp.e1004564. ⟨10.1371/journal.pgen.1004564⟩
Journal articles hal-01197631v1
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Functional analysis of Arabidopsis immune-related MAPKs uncovers a role for MPK3 as negative regulator of inducible defences

Nicolas Frei Dit Frey , Anna Victoria Garcia , Jean Bigeard , Rim Zaag , Eduardo Bueso
Genome Biology, 2014, 15 (6), pp.R87. ⟨10.1186/gb-2014-15-6-r87⟩
Journal articles hal-02631808v1

MYB118 Represses Endosperm Maturation in Seeds of Arabidopsis

Guillaume Barthole , Alexandra To , Chloé Marchive , Veronique Brunaud , Ludivine Soubigou-Taconnat
The Plant cell, 2014, 26 (9), pp.3519 - 3537. ⟨10.1105/tpc.114.130021⟩
Journal articles hal-01204153v1
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A TILLING platform for functional genomics in [i]Brachypodium distachyon[/i]

Marion Dalmais , Sébastien Antelme , Marie-Séverine Ho-Yue-Kuang , Yin Wang , Olivier Darracq
PLoS ONE, 2013, 8 (6), ⟨10.1371/journal.pone.0065503⟩
Journal articles hal-01190604v1
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PT-Flax (phenotyping and TILLinG of flax): development of a flax (Linum usitatissimum L.) mutant population and TILLinG platform for forward and reverse genetics.

M. Chantreau , S. Grec , L. Gutierrez , M. Dalmais , Christophe Pineau
BMC Plant Biology, 2013, 13 (159), pp.159. ⟨10.1186/1471-2229-13-159⟩
Journal articles hal-01093161v1

Unsupervised Classification for Tiling Arrays: ChIP-chip and Transcriptome

Caroline Berard , Marie-Laure Magniette , Veronique Brunaud , Sebastien Aubourg , Stephane Robin
Statistical Applications in Genetics and Molecular Biology, 2011, 10 (1), pp.50. ⟨10.2202/1544-6115.1692⟩
Journal articles hal-01190201v1

Integrative epigenomic mapping defines four main chromatin states in Arabidopsis

François Roudier , Ikhlak Ahmed , Caroline Bérard , Alexis Sarazin , Tristan Mary-Huard
The EMBO Journal, 2011, 30 (10), pp.1928-1938. ⟨10.1038/emboj.2011.103⟩
Journal articles hal-04383147v1

Integrative epigenomic mapping defines four main chromatin states in Arabidopsis

François Roudier , Ikhlak I. Ahmed , Caroline C. Berard , Alexis A. Sarazin , Tristan Mary-Huard
EMBO Journal, 2011, 30 (10), pp.1928 - 1938. ⟨10.1038/emboj.2011.103⟩
Journal articles hal-00999846v1
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Exploration of plant genomes in the FLAGdb++ environment

Sandra S. Derozier , Franck F. Samson , Jean-Philippe Tamby , Cecile C. Guichard , Veronique V. Brunaud
Plant Methods, 2011, 7 (8), 10 p. ⟨10.1186/1746-4811-7-8⟩
Journal articles hal-02652189v1

Hight throughput identification of Pisum sativum mutant lines by TILLING: a tool for crop improvement using either forward of reverse genetics approaches

Christine Lesignor , Marion M. Dalmais , Veronique V. Brunaud , Richard Thompson , Abdelhafid A. Bendahmane
Grain Légumes, 2009, pp.18-19
Journal articles hal-02655984v1
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A physical map of the heterozygous grapevine 'Cabernet Sauvignon' allows mapping candidate genes for disease resistance

Marco Moroldo , Sophie Paillard , Raffaella Marconi , Fabrice Legeai , Aurélie Canaguier
BMC Plant Biology, 2008, 8 (66), pp.1-14. ⟨10.1186/1471-2229-8-66⟩
Journal articles inria-00329169v1
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CATdb: a public access to Arabidopsis transcriptome data from the URGV-CATMA platform

Séverine Gagnot , Jean-Philippe Tamby , Marie-Laure Magniette , Frederique Bitton , Ludivine Taconnat
Nucleic Acids Research, 2008, 36, pp.D986-D990. ⟨10.1093/nar/gkm757⟩
Journal articles hal-01203869v1
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UTILLdb, a Pisum sativum in silico forward and reverse genetics tool

Marion M. Dalmais , Julien Schmidt , Christine Le Signor , Francoise Moussy , Judith Burstin
Genome Biology, 2008, 9 (2), R43, 12p. ⟨10.1186/gb-2008-9-2-r43⟩
Journal articles hal-02666957v1
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Analysis of CATMA transcriptome data identifies hundreds of novel functional genes and improves gene models in the Arabidopsis genome

Sebastien S. Aubourg , Marie-Laure Martin-Magniette , Veronique V. Brunaud , Ludivine Taconnat , Frederique Bitton
BMC Genomics, 2007, 8 (401), pp.1-9. ⟨10.1186/1471-2164-8-401⟩
Journal articles hal-02668276v1
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GeneFarm, structural and functional annotation of Arabidopsis gene and protein families by a network of experts

Sebastien Aubourg , Veronique Brunaud , Clémence Bruyère , J. Mark Cock , Richard Cooke
Nucleic Acids Research, 2005, 33, pp.D641-D646. ⟨10.1093/nar/gki115⟩
Journal articles hal-01189162v1

GeneFarm, structural and functional annotation of Arabidopsis gene and protein families by a network of experts.

S. Aubourg , V. Brunaud , C. Bruyere , M. Cock , R. Cooke
Nucleic Acids Research, 2005, 33, pp.D641-D646
Journal articles hal-00313737v1
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FLAGdb++: a database for the functional analysis of the Arabidopsis genome

Franck Samson , Véronique Brunaud , S. Duchêne , Y. de Oliveira , Michel M. Caboche
Nucleic Acids Research, 2004, 32 (1), pp.347-350. ⟨10.1093/nar/gkh134⟩
Journal articles hal-02682811v1

DEAD-box RNA helicases in Arabidopsis thaliana: establishing a link between quantitative expression, gene structure and evolution of a family of genes

A. Mingam , Claire Toffano-Nioche , Véronique Brunaud , Nathalie Boudet , M. Kreis
Plant Biotechnology Journal, 2004, 2 (5), pp.401-405. ⟨10.1111/j.1467-7652.2004.00084.x⟩
Journal articles hal-02682507v1
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FLAGdb/FST: a database of mapped flanking insersion sites (FSTs) of Arabidopsis thaliana T-DNA transformants

Franck Samson , Véronique Brunaud , Sandrine Balzergue , Bertrand B. Dubreucq , Loic L. Lepiniec
Nucleic Acids Research, 2002, 30 (1), pp.94-97
Journal articles hal-02678939v1

T-DNA integration into Arabidopsis genome depends on sequences of pre-insertion sites

Véronique Brunaud , Sandrine Balzergue , Bertrand B. Dubreucq , Sebastien Aubourg , Franck Samson
EMBO Reports, 2002, 3 (12), pp.1152-1157. ⟨10.1093/embo-reports/kvf237⟩
Journal articles hal-02682810v1

Improved PCR-walking for large-scale isolation of plant T-DNA borders

Sandrine Balzergue , Bertrand B. Dubreucq , Sylvie Chauvin , I. Le-Clainche , F. Le Boulaire
Biotechniques, 2001, 30 (3), 3 p
Journal articles hal-02670631v1
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Normes et standards dans le processus de traitement du document numérique en biologie moléculaire

Gabriel Gallezot , Franck Samson , Véronique Brunaud , Shahinaz Gas , Philippe Bessières
Solaris, 2000, 6
Journal articles sic_00000055v2

Orientation specificity of the Lactococcus lactis Chi site

Meriem El Karoui , M. Schaeffer , Veronique Biaudet , A. Bolotin , A. Sorokin
Genes to Cells, 2000, 5, pp.453-461
Journal articles hal-02690978v1

Characteristics of Chi distribution on different bacterial genomes

Meriem El Karoui , Veronique Biaudet , Sophie Schbath , Alexandra A. Gruss
Research in Microbiology, 1999, 150, pp.579-587
Journal articles hal-02697692v1

Codon usage can explain GT-rich islands surrounding Chi sites on the Escherichia coli genome

Veronique Biaudet , Meriem El Karoui , Alexandra A. Gruss
Molecular Microbiology, 1998, 29, pp.666-668
Journal articles hal-02684952v1

Analysis of the Bacillus subtilis genome sequence reveals nine new T-box leaders

Alain Chopin , Veronique Biaudet , S.D. Ehrlich
Molecular Microbiology, 1998, 29, pp.662-664
Journal articles hal-02689739v1

Shiga-like toxin I is a polynucleotide: adenosine glycosidase

Alain Chopin , Veronique Biaudet , S.D. Ehrlich
Molecular Microbiology, 1998, 29 (2), pp.661-664
Journal articles hal-02692246v1

Identification of the Chi site of Haemophilus influenzae as several sequences related to the Escherichia coli Chi site

Sophie Sourice , Veronique Biaudet , Meriem El Karoui , S.D. Ehrlich , Alexandra A. Gruss
Molecular Microbiology, 1998, 27 (5), pp.1021-1029
Journal articles hal-02691790v1

A five-nucleotide sequence protects DNA from exonucleolytic degradation by AddAB, the RecBCD analogue of Bacillus subtilis

Frédéric Chédin , Philippe Noirot , Veronique Biaudet , S.D. Ehrlich
Molecular Microbiology, 1998, 29 (6), pp.1369-1377
Journal articles hal-02684405v1

Computerized genetic map of Bacillus subtilis

Veronique Biaudet , Franck Samson , C. Anagnostopoulos , S.D. Ehrlich , Philippe Bessières
Microbiology, 1996, 142, pp.2669-2729
Journal articles hal-02684956v1

Characteristic of the Endosperm Adjacent to the Embryo Scutellum (EAS) of Maize

Nicolas Doll , Yannick Fierlej , Jérémy Just , Veronique Brunaud , José Caius
4th European Maize Meeting, Sep 2021, Regensburg, Germany
Conference papers hal-03354711v1

Plant nitrogen supply affects Arabidopsis thaliana susceptibility to Botrytis cinerea and reveals novel virulence functions

Marie-Christine Soulie , Antoine Davière , Veronique Brunaud , Ludivine Soubigou-Taconnat , Mathilde Fagard
18th Congress of International-Society-for-Molecular-Plant-Microbe-Interactions (IS-MPMI), International Society for Molecular Plant-Microbe Interactions, Jul 2019, Glasgow, United Kingdom. pp.49-49
Conference papers hal-02612362v1

PLMdetect: a bioinformatic approach to identify cis-regulatory motifs in promoters of Plant genomes.

Julien Rozière , Cecile C. Guichard , Margot Correa , Sylvie Coursol , Marie-Laure Martin-Magniette
2nd International Conference on Plant & Molecular Biology, Oct 2019, Amsterdam, Netherlands
Conference papers hal-02955246v1

Genome-wide hypermethylation of TEs following low temperature exposure in maize

Zeineb Achour , Johann Joets , Martine Leguilloux , Hélène Sellier , Jean-Philippe Pichon
Plant and Animal Genomes XXVII, Jan 2019, San Diego (California), United States
Conference papers hal-04353481v1
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Découverte de variants (SNPs) et génotypage à partir de données RNA-seq chez le peuplier noir

Odile Rogier , Souhila Amanzougarene , Marie-Claude Lesage Descauses , Sandrine Balzergue , Veronique Brunaud
Colloque EPGV 2016 "Détection, Gestion et Analyse du Polymorphisme des Génomes Végétaux", Oct 2016, Angers, France
Conference papers hal-01603542v1
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Toward a characterization of the pepper host resistance effect on the gene expression of the pathogenic Phytophthora capsici

Gaëtan Maillot , Anne Massire , Jean-Paul Bouchet , Véronique Brunaud , Marie-Laure Martin-Magniette
12. Solanaceae Conference, Oct 2015, Bordeaux, France
Conference papers hal-02795452v1
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RNA-Seq study of host resistance and isolate aggressiveness on gene expression in [i]Phytophthora capsici[/i]

Gaëtan Maillot , Anne Massire , Jean-Paul Bouchet , Veronique Brunaud , Marie-Laure Magniette
8. Effectome Meeting, Sep 2015, Lauret, France
Conference papers hal-01210021v1

Diversity and Evolution of the Molecular Mechanisms Involved in Nickel Hyperaccumulation in Plants

Sylvain Merlot , Vanesa Sanchez Garcia de La Torre , Bruno Fogliani , Louis-Charles Brinon , Valérie Burtet-Sarramegna
13th SGA Biennial Meeting on Mineral Resources in a Sustainable World, Centre National de la Recherche Scientifique (CNRS). Nancy, FRA., Aug 2015, Nancy, France. pp.3
Conference papers hal-02741948v1

Physical mapping and re-sequencing of a set of resistance related genes in grapevine

Marco Moroldo , Sophie Paillard , R. Marconi , Fabrice Legeai , Aurelie Canaguier
17. Conference Plant and Animal Genomes, Labo/service de l'auteur, Ville service, Pays service., Jan 2009, San Diego, United States. 1 p
Conference papers hal-01462667v1

Genomic ressources for pea

Marion M. Dalmais , Julien Schmidt , Christine Le Signor , Francoise Moussy , Judith Burstin
6. European Conference on Grain Legumes "Integrating legume biology for sustainable agriculture", Nov 2007, Lisbon, Portugal. 199 p
Conference papers hal-02754438v1

Transcriptome analysis reveals putative target genes of APETALA3-3 during early floral development in Nigella damascena L.

Yves Deveaux , Natalia Conde e Silva , Martine Le Guilloux , Harry Belcram , Etienne Delannoy
Workshop on Molecular Mechanisms Controlling Flower Development, May 2022, Alicante (SPAIN), Spain
Conference poster hal-04336815v1
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Impact de la résistance partielle du piment sur l'expression des gènes de Phytophthora capsici : conséquences pour la création variétale

Véronique Lefebvre , Anne Massire , Gaëtan Maillot , Emmanuel Szadkowski , Bernard Caromel
13e Rencontres de Phytopathologie - Mycologie, Journées Jean Chevaugeon, Sep 2022, Aussois (France), France
Conference poster hal-04133322v1

Transcriptome analysis of a chilling tolerance strategy in European maize dent germplasm.

Catalina Durand Garzon , Hélène Sellier-Richard , Jan Drouaud , Ludivine Soubigou-Taconnat , Veronique Brunaud
XXIVth EUCARPIA Maize and Sorghum Conference. Integrating quantitative and molecular genetics to develop new breeding methods in maize and sorghum., Oct 2019, Freising, Germany
Conference poster hal-02955226v1

Genome-wide hypermethylation of TEs and centromeres following low temperature exposure in B73

Zeineb Achour , Johann Joets , Martine Leguilloux , Hélène Sellier , Jean-Philippe Pichon
61st Annual Maize Genetics Conference, Mar 2019, Saint Louis (Missouri), United States
Conference poster hal-04353514v1
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Deciphering molecular origin and functional impact of structural variation in maize through genome sequences comparison and integrative analysis of genetic variation, transcriptome and phenotype data

Johann Joets , Sylvie Coursol , Olivier Turc , Llorenç Cabrera Bosquet , Marie-Laure Martin-Magniette
60. Maize Genetics Conference, Mar 2018, Saint-Malo, France. , 2018
Conference poster hal-02738241v1
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Deciphering molecular origin and functional impact of structural variation in maize through genome sequences comparison and integrative analysis of genetic variation, transcriptome and phenotype data

Johann J. Joets , Sylvie Coursol , Olivier Turc , Llorenç Cabrera-Bosquet , Marie-Laure Magniette Martin-Magniette
First International Plant Systems Biology meeting, Sep 2018, Roscoff, France
Conference poster hal-02955192v1

Prediction of black poplar biofuel production: disentangling omnigenics with transcriptomics

Aurélien Chateigner , Odile Rogier , Véronique Jorge , Jean-Charles Leplé , Veronique Brunaud
Detecting the Genomic Signal of Polygenic Adaptation and the Role of Epistasis in Evolution, Aug 2017, Zurich, Switzerland. , 45 p., 2017, Symposium: Detecting the Genomic Signal of Polygenic Adaptation and the Role of Epistasis in Evolution
Conference poster hal-01607166v1
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SNP discovery and validation from RNA-seq data in black poplar

Odile Rogier , Souhila Amanzougarene , Marie-Claude Lesage Descauses , Sandrine Balzergue , Véronique Brunaud
JOBIM 2017 - Journées Ouvertes Biologie Informatique Mathématiques, Jul 2017, Lille, France. 2017, JOBIM 2017 Journées Ouvertes Biologie Informatique Mathématiques. Actes
Conference poster hal-02737565v1

CORGI : Co-regulated gene investigator.

Sandra Pelletier , Sylvain Gaillard , Sebastien Aubourg , Martin-Magniette Marie-Laure , Veronique Brunaud
Journées Ouvertes Biologie Informatique et Mathématiques (JOBIM’2016), Jun 2016, Lyon, France
Conference poster hal-03104271v1

Transcriptomic regulation in pepper during the interaction with Phytophthora capsici.

Gaëtan Maillot , Emmanuel Szadkowski , Anne Massire , Jean-Paul Bouchet , Veronique Brunaud
16th Eucarpia Capsicum and Eggplant Meeting, Sep 2016, Kecskemét, Hungary
Conference poster hal-03551784v1
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A systems biology approach for identifying candidate genes involved in the natural variability of biomass yield and chemical properties in black poplar

Vincent Segura , Marie-Claude Lesage Descauses , Jean-Paul Charpentier , Kévin Kinkel , Claire Mandin
IUFRO Genomics and Forest Tree Genetics, May 2016, Arcachon, France. , 2016, IUFRO Genomics and Forest Tree Genetics. Book of Abstract
Conference poster hal-01456004v1
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Nucleotide diversity of Populus nigra transcriptomes

Odile Rogier , Souhila Amanzougarene , Marie-Claude Lesage Descauses , Sandrine Balzergue , Veronique Brunaud
IUFRO Genomics and Forest Tree Genetics, May 2016, Arcachon, France. 2016, IUFRO Genomics and Forest Tree Genetics. Book of Abstracts
Conference poster hal-01456005v1
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Transcriptomic regulation in pepper during the interaction with Phytophthora capsici

Gaëtan Maillot , Emmanuel Szadkowski , Anne Massire , Jean-Paul Bouchet , Veronique Brunaud
16. Eucarpia Capsicum and Eggplant Meeting, Sep 2016, Kecskemét, Hungary. 2016
Conference poster hal-02799453v1

CATMA: a new resource for transcription profiling in Arabidopsis thaliana

Frédérique Bitton , Ludivine Taconnat , K. Boivin , Séverine Gagnot , Veronique Brunaud
2001, 2001
Conference poster hal-02826453v1

Pea TILLING platform

Marion M. Dalmais , Julien Schmidt , Christine Le Signor , Francoise Moussy , Judith Burstin
6. European Conference on Grain Legumes "Integrating legume biology for sustainable agriculture", Nov 2007, Lisbon, Portugal. European Conference on Grain Legumes, 199 p., 2007
Proceedings hal-02822350v1

Bioinformatic analysis of chloroplast gene expression and RNA posttranscriptional maturations using RNA Sequencing

Bastien Malbert , Guillem Rigaill , Véronique Brunaud , Claire Lurin , Etienne Delannoy
Plastids, 1829, Humana Press Inc., pp.16, 2018, Methods in Molecular Biology, 978-1-4939-8654-5; 978-1-4939-8653-8. ⟨10.1007/978-1-4939-8654-5_19⟩
Book sections hal-02788517v1

FLAGdb(++): A Bioinformatic Environment to Study and Compare Plant Genomes

Jean-Philippe Tamby , Véronique Brunaud
Plant Genomics Databases, 1533, SPRINGER, pp.23, 2017, Methods in Molecular Biology, 978-1-4939-6658-5; 978-1-4939-6656-1. ⟨10.1007/978-1-4939-6658-5_4⟩
Book sections hal-02790413v1

Micado, an integrative database for systematic functional analysis of Bacillus subtilis and microbial genomics

Etienne Dervyn , Franck Samson , Véronique Brunaud , S. Dusko Ehrlich , Philippe Bessieres
Functional Analysis of Bacterial Genes : A Practical Manual, John Wiley and Sons Ltd, 404 p., 2001, 978-0-471-49008-1
Book sections hal-02828496v1

List of Bacillus subtilis unknown genes with a phenotype determined by the functional analysis project

Etienne Dervyn , Véronique Brunaud , Franck Samson , Shahinaz Gas , Gabriel Gallezot
Functional Analysis of Bacterial Genes : A Practical Manual, John Wiley and Sons Ltd, 404 p., 2001, 978-0-471-49008-1
Book sections hal-02828656v1

Phenotype responses and reporter gene activity from the systematic functional analysis of Bacillus subtilis unknown genes

Etienne Dervyn , Véronique Brunaud , Franck Samson , Shahinaz Gas , Gabriel Gallezot
Functional Analysis of Bacterial Genes : A Practical Manual, John Wiley and Sons Ltd, 404 p., 2001, 978-0-471-49008-1
Book sections hal-02829100v1