Yves Gibon

314

Documents

Publications

	The rates of starch depletion and hydraulic failure both play a role in drought-induced seedling mortality Santiago Trueba , Noelia González Muñoz , Régis Burlett , Laurent J Lamarque , Yves Gibon Annals of Forest Science, 2024, 81 (1), pp.27. ⟨10.1186/s13595-024-01246-7⟩ Journal articles hal-04667578v1
	Genetic control of abiotic stress-related specialized metabolites in sunflower Marco Moroldo , Nicolas Blanchet , Harold Duruflé , Stéphane Bernillon , Thierry Berton BMC Genomics, 2024, 25 (1), pp.199. ⟨10.1186/s12864-024-10104-9⟩ Journal articles hal-04468891v1
	Multi-regulated GDP-l-galactose phosphorylase calls the tune in ascorbate biosynthesis Pierre Baldet , Kentaro Mori , Sylvain Prigent , Guillaume Decros , Bertrand Beauvoit Journal of Experimental Botany, 2024, 75 (9), pp.2631-2643. ⟨10.1093/jxb/erae032/7607105⟩ Journal articles hal-04530669v1
	Ecological and metabolic implications of the nurse effect of Maihueniopsis camachoi in the Atacama Desert Francisca Díaz , Thomas Dussarrat , Gabriela Carrasco-Puga , Sophie Colombie , Sylvain Prigent New Phytologist, 2024, 241 (3), pp.1074-1087. ⟨10.1111/nph.19415⟩ Journal articles hal-04514679v1
	Deciphering molecular events behind Systemin-induced resistance to Botrytis cinerea in tomato plants Julia Pastor-Fernández , Neus Sanmartín , Maria Manresa-Grao , Cédric Cassan , Pierre Pétriacq Journal of Experimental Botany, 2024, ⟨10.1093/jxb/erae146⟩ Journal articles hal-04612162v1
	Different wheat loci are associated to heritable free asparagine content in grain grown under different water and nitrogen availability Mélanie Lavoignat , Cédric Cassan , Pierre Pétriacq , Yves Gibon , Emmanuel Heumez TAG Theoretical and Applied Genetics, 2024, 137 (2), pp.46. ⟨10.1007/s00122-024-04551-x⟩ Journal articles hal-04461297v1
	Enzyme‐based kinetic modelling of ASC–GSH cycle during tomato fruit development reveals the importance of reducing power and ROS availability Guillaume Decros , Thomas Dussarrat , Pierre Baldet , Cédric Cassan , Cécile Cabasson New Phytologist, 2023, ⟨10.1111/nph.19160⟩ Journal articles hal-04178513v1
	Multi-omics quantitative data of tomato fruit unveils regulation modes of least variable metabolites Annick Moing , Thierry Berton , Léa Roch , Salimata Diarrassouba , Stéphane Bernillon BMC Plant Biology, 2023, 23 (365), ⟨10.1186/s12870-023-04370-0⟩ Journal articles hal-04183193v1
	GABA shunt pathway is stimulated in response to early defoliation-induced carbohydrate limitation in Mandarin fruits Radia Lourkisti , Sandrine Antoine , Olivier Pailly , François Luro , Yves Gibon Heliyon, 2023, 9 (4), pp.e15573. ⟨10.1016/j.heliyon.2023.e15573⟩ Journal articles hal-04176065v1
	Blue light promotes ascorbate synthesis by deactivating the PAS/LOV photoreceptor that inhibits GDP- l -galactose phosphorylase Céline Bournonville , Kentaro Mori , Paul Deslous , Guillaume Decros , Tim Blomeier The Plant cell, 2023, 35 (7), pp.2615-2634. ⟨10.1093/plcell/koad108⟩ Journal articles hal-04083263v1
	Détermination des volumes cellulaires et subcellulaires par analyse d’images de microscopie : Comment estimer la vitesse de croissance de cellules du fruit ? Marie-Hélène Andrieu , Catherine Cheniclet , Martine Dieuaide-Noubhani , Bertrand Beauvoit , Yves Gibon NOV'AE, 2023, 14, pp.1-15. ⟨10.17180/novae-2023-NO-art14⟩ Journal articles hal-04575735v1
	Comparative constraint‐based modelling of fruit development across species highlights nitrogen metabolism in the growth‐defence trade‐off Sophie Colombie , Sylvain Prigent , Cédric Cassan , Ghislaine Hilbert‐masson , Christel Renaud The Plant Journal, 2023, ⟨10.1111/tpj.16409⟩ Journal articles hal-04185814v1
	Differences between tree stem CO 2 efflux and O 2 influx rates cannot be explained by internal CO 2 transport or storage in large beech trees Juliane Helm , Roberto L Salomón , Boaz Hilman , Jan Muhr , Alexander Knohl Plant, Cell and Environment, 2023, Online first, ⟨10.1111/pce.14614⟩ Journal articles hal-04121662v1
	Advances in fruit development and ripening Sonia Osorio , Fabrizio Costa , Yves Gibon , Björn Usadel , Ariel Vicente Journal of Experimental Botany, 2023, 74 (20), pp.6205-6206. ⟨10.1093/jxb/erad379⟩ Journal articles hal-04384872v1
	The potential of integrative phenomics to harness underutilized crops for improving stress resilience Dominik K Großkinsky , J.-D. Faure , Yves Gibon , Richard P Haslam , Björn Usadel Frontiers in Plant Science, 2023, 14, pp.1216337. ⟨10.3389/fpls.2023.1216337⟩ Journal articles hal-04215355v1
	A low carbon balance triggers Microvine inflorescence abscission at high temperatures Nathalie Luchaire , Laurent Torregrosa , Yves Gibon , Markus Rienth , Charles Romieu Frontiers in Horticulture, 2023, 2, pp.1267429. ⟨10.3389/fhort.2023.1267429⟩ Journal articles hal-04539592v1
	Predictive metabolomics of multiple Atacama plant species unveils a core set of generic metabolites for extreme climate resilience Thomas Dussarrat , Sylvain Prigent , Claudio Latorre , Stéphane Bernillon , Amélie Flandin New Phytologist, 2022, 234 (5), pp.1614-1628. ⟨10.1111/nph.18095⟩ Journal articles hal-03626433v1
	Comparative Analysis of Antioxidant Accumulation under Cold Acclimation, Deacclimation and Reacclimation in Winter Wheat Gabija Vaitkevičiūtė , Andrius Aleliūnas , Yves Gibon , Rita Armonienė Plants, 2022, 11 (21), pp.2818. ⟨10.3390/plants11212818⟩ Journal articles hal-03915215v1
	Protocole de marquage à l’azote 15N de fruits de tomate issus de plantes cultivées en condition standard Marie-Hélène Andrieu , Isabelle Atienza , Cédric Cassan , Anne Marmagne , Daniel Just NOV'AE, 2022, 05, pp.1-11. ⟨10.17180/novae-2022-NO-art05⟩ Journal articles hal-03766575v1
	High-throughput plant phenotyping: a role for metabolomics? Robert Hall , John D’auria , Antonio Silva Ferreira , Yves Gibon , Dariusz Kruszka Trends in Plant Science, 2022, 27 (6), pp.549-563. ⟨10.1016/j.tplants.2022.02.001⟩ Journal articles hal-03604241v1
	From fruit growth to ripening in plantain: a careful balance between carbohydrate synthesis and breakdown Nadia Campos , Sophie Colombie , Annick Moing , Cedric Cassan , Delphine Amah Journal of Experimental Botany, 2022, 73 (14), pp.4832-4849. ⟨10.1093/jxb/erac187⟩ Journal articles hal-03675840v1
	Impaired cell growth under ammonium stress explained by modeling the energy cost of vacuole expansion in tomato leaves Théo Poucet , Bertrand Beauvoit , María Begoña González-Moro , Cecile Cabasson , Pierre Pétriacq The Plant Journal, 2022, 112 (4), pp.1014-1028. ⟨10.1111/tpj.15991⟩ Journal articles hal-03855200v1
	MetaPhenomics: quantifying the many ways plants respond to their abiotic environment, using light intensity as an example Hendrik Poorter , Xinyou Yin , Nouf Alyami , Yves Gibon , Thijs L Pons Plant and Soil, 2022, online first, ⟨10.1007/s11104-022-05391-8⟩ Journal articles hal-03702403v1
	The effect of cold acclimation, deacclimation and reacclimation on metabolite profiles and freezing tolerance in winter wheat Gabija Vaitkevičiūtė , Andrius Aleliūnas , Yves Gibon , Rita Armonienė Frontiers in Plant Science, 2022, 13, pp.959118. ⟨10.3389/fpls.2022.959118⟩ Journal articles hal-03768019v1
	Plant sugar metabolism, transport and signalling in challenging environments Thomas Nägele , Yves Gibon , Rozenn Le Hir Physiologia Plantarum, 2022, 174 (5), ⟨10.1111/ppl.13768⟩ Journal articles hal-03773295v1
	Integrated multi-omic analysis of fruit maturity identifies biomarkers with drastic abundance shifts spanning the harvest period in ‘Royal Gala’ apple Laurie Favre , Donald Hunter , Erin O’donoghue , Zoe Erridge , Nathanael Napier Postharvest Biology and Technology, 2022, 193, pp.112059. ⟨10.1016/j.postharvbio.2022.112059⟩ Journal articles hal-04181587v1
	Grape ASR Regulates Glucose Transport, Metabolism and Signaling Jonathan Parrilla , Anna Medici , Cécile Gaillard , Jérémy Verbeke , Yves Gibon International Journal of Molecular Sciences, 2022, 23 (11), pp.6194. ⟨10.3390/ijms23116194⟩ Journal articles hal-03702354v1
	The Evolution of Leaf Function during Development Is Reflected in Profound Changes in the Metabolic Composition of the Vacuole Alice Destailleur , Théo Poucet , Cecile Cabasson , Ana Paula Alonso , Jean-Christophe Cocuron Metabolites, 2021, 11 (12), pp.848. ⟨10.3390/metabo11120848⟩ Journal articles hal-03505133v1
	The NAD Kinase Slr0400 Functions as a Growth Repressor in Synechocystis sp. PCC 6803 Yuuma Ishikawa , Cedric Cassan , Aikeranmu Kadeer , Koki Yuasa , Nozomu Sato Plant and Cell Physiology, 2021, 62 (4), pp.668-677. ⟨10.1093/pcp/pcab023⟩ Journal articles hal-03182729v1
	Maize metabolome and proteome responses to controlled cold stress partly mimic early‐sowing effects in the field and differ from those of Arabidopsis Maria Urrutia , Melisande Blein-Nicolas , Sylvain Prigent , Stéphane Bernillon , Catherine Deborde Plant, Cell and Environment, 2021, 44 (5), pp.1504-1521. ⟨10.1111/pce.13993⟩ Journal articles hal-03107184v1
	Metabolic Profile Discriminates and Predicts Arabidopsis Susceptibility to Virus under Field Conditions Bernadette Rubio , Olivier Fernandez , Patrick Cosson , Thierry Berton , Mélodie Caballero Metabolites, 2021, 11 (4), pp.230. ⟨10.3390/metabo11040230⟩ Journal articles hal-03197197v1
	Mitochondrial metabolism supports resistance to IDH mutant inhibitors in acute myeloid leukemia Lucille Stuani , Marie Sabatier , Estelle Saland , Guillaume Cognet , Nathalie Poupin Journal of Experimental Medicine, 2021, 218 (5), pp.e20200924. ⟨10.1084/jem.20200924⟩ Journal articles hal-03563454v1
	Overproduction of ascorbic acid impairs pollen fertility in tomato Paul Deslous , Céline Bournonville , Guillaume Decros , Yoshihiro Okabe , Jean-Philippe Mauxion Journal of Experimental Botany, 2021, 72 (8), pp.3091-3107. ⟨10.1093/jxb/erab040⟩ Journal articles hal-03152478v1
	Thioredoxin m overexpression in chloroplasts alters carbon and nitrogen partitioning in tobacco plants María Ancín , Luis Larraya , Igor Florez-Sarasa , Camille Bénard , Alicia Fernández-San Millán Journal of Experimental Botany, 2021, 72 (13), pp.4949-4964. ⟨10.1093/jxb/erab193⟩ Journal articles hal-03224310v1
	Ammonium supply induces differential metabolic adaptive responses in tomato according to leaf phenological stage Théo Poucet , María Begoña González-Moro , Cecile Cabasson , Bertrand Beauvoit , Yves Gibon Journal of Experimental Botany, 2021, 72 (8), pp.3185-3199. ⟨10.1093/jxb/erab057⟩ Journal articles hal-03179910v1
	Another Tale from the Harsh World: How Plants Adapt to Extreme Environments Thomas Dussarrat , Guillaume Decros , Francisca P , Yves Gibon , Claudio Latorre Annual Plant Reviews Online, 2021, 4 (2), pp.551-603. ⟨10.1002/9781119312994.apr0758⟩ Journal articles hal-03320839v1
	Leaf metabolomic data of eight sunflower lines and their sixteen hybrids under water deficit Thierry Berton , Stéphane Bernillon , Olivier Fernandez , Harold Duruflé , Amélie Flandin OCL Oilseeds and fats crops and lipids, 2021, 28, 42 - 6 p. ⟨10.1051/ocl/2021029⟩ Journal articles hal-03321074v1
	Grapevines under drought do not express esca leaf symptoms Giovanni Bortolami , Gregory Gambetta , Cédric Cassan , Silvina Dayer , Elena Farolfi Proceedings of the National Academy of Sciences of the United States of America, 2021, 118 (43), pp.e2112825118. ⟨10.1073/pnas.2112825118⟩ Journal articles hal-03474970v1
	Modelling predicts tomatoes can be bigger and sweeter if biophysical factors and transmembrane transports are fine‐tuned during fruit development Jinliang Chen , Bertrand Beauvoit , Michel Génard , Sophie Colombie , Annick Moing New Phytologist, 2021, 230, pp.1489-1502. ⟨10.1111/nph.17260⟩ Journal articles hal-03152042v1
	Regulation of carbon metabolism in two maize sister lines contrasted for chilling tolerance Catalina Duran Garzon , Michelle Lequart-Pillon , Carsten Rautengarten , Solène Bassard , Hélène Sellier-Richard Journal of Experimental Botany, 2020, 71 (1), pp.356-369. ⟨10.1093/jxb/erz421⟩ Journal articles hal-02620164v1
	Model-assisted comparison of sugar accumulation patterns in ten fleshy fruits highlights differences between herbaceous and woody species Coffi Belmys Cakpo , Gilles Vercambre , Valentina Baldazzi , Léa Roch , Zhanwu Dai Annals of Botany, 2020, 126 (3), pp.455-470. ⟨10.1093/aob/mcaa082⟩ Journal articles hal-02749663v1
	Transcriptomic and proteomic data in developing tomato fruit Isma Belouah , Camille Bénard , Alisandra Denton , Melisande Blein-Nicolas , Thierry Balliau Data in Brief, 2020, 28, pp.1-8. ⟨10.1016/j.dib.2019.105015⟩ Journal articles hal-02539392v1
	Making experimental data tables in the life sciences more FAIR: a pragmatic approach Daniel Jacob , Romain David , Sophie Aubin , Yves Gibon GigaScience, 2020, 9 (12), pp.giaa144. ⟨10.1093/gigascience/giaa144⟩ Journal articles hal-02883355v4
	Fruit setting rewires central metabolism via gibberellin cascades Yoshihito Shinozaki , Bertrand Beauvoit , Masaru Takahara , Shuhei Hao , Kentaro Ezura Proceedings of the National Academy of Sciences of the United States of America, 2020, 117 (38), pp.23970-23981. ⟨10.1073/pnas.2011859117⟩ Journal articles hal-02946501v1
	Omics data reveal putative regulators of einkorn grain protein composition under sulfur deficiency Titouan Bonnot , Pierre Martre , Victor Hatte , Mireille Dardevet , Philippe Leroy Plant Physiology, 2020, 183 (2), pp.501-516. ⟨10.1104/pp.19.00842⟩ Journal articles hal-02553742v1
	Adenine Nucleotide and Nicotinamide Adenine Dinucleotide Measurements in Plants Youjun Zhang , Ina Krahnert , Antje Bolze , Yves Gibon , Alisdair Fernie Current Protocols in Plant Biology, 2020, 5 (3), pp.e20115. ⟨10.1002/cppb.20115⟩ Journal articles hal-02926938v1
	Biomass composition explains fruit relative growth rate and discriminates climacteric from non-climacteric species Léa Roch , Sylvain Prigent , Holger Klose , Coffi-Belmys Cakpo , Bertrand Beauvoit Journal of Experimental Botany, 2020, 71 (19), pp.5823-5836. ⟨10.1093/jxb/eraa302⟩ Journal articles hal-02904041v1
	Metabolomics to Exploit the Primed Immune System of Tomato Fruit. Estrella Luna , Amélie Flandin , Cédric Cassan , Sylvain Prigent , Chloé Chevanne Metabolites, 2020, 10 (3), pp.96. ⟨10.3390/metabo10030096⟩ Journal articles hal-02629273v1
	Peptide filtering differently affects the performances of XIC-based quantification methods Isma Belouah , Melisande Blein-Nicolas , Thierry Balliau , Yves Gibon , Michel Zivy Journal of Proteomics, 2019, 193, pp.131-141. ⟨10.1016/j.jprot.2018.10.003⟩ Journal articles hal-02327322v1
	Identification of the Arabidopsis calmodulin-dependent NAD+ kinase that sustains the elicitor-induced oxidative burst Elisa Dell'Aglio , Cécile Giustini , Alexandra Kraut , Yohann Couté , Alex Costa Plant Physiology, 2019, 181 (4), pp.1449-1458. ⟨10.1104/pp.19.00912⟩ Journal articles hal-02361156v1
	Modeling Protein Destiny in Developing Fruit Isma Belouah , Christine Nazaret , Pierre Pétriacq , Sylvain Prigent , Camille Bénard Plant Physiology, 2019, 180 (3), pp.1709-1724. ⟨10.1104/pp.19.00086⟩ Journal articles hal-02327302v1
	Metabolomic characterization of sunflower leaf allows discriminating genotype groups or stress levels with a minimal set of metabolic markers Olivier Fernandez , Maria Urrutia , Thierry Berton , Stéphane Bernillon , Catherine Deborde Metabolomics, 2019, 15 (4), pp.56. ⟨10.1007/s11306-019-1515-4⟩ Journal articles hal-02487236v1
	Fruit salad in the lab: comparing botanical species to help deciphering fruit primary metabolism Léa Roch , Zhanwu Dai , Eric Gomes , Stéphane Bernillon , Jiaojiao Wang Frontiers in Plant Science, In press, 10, pp.836. ⟨10.3389/fpls.2019.00836⟩ Journal articles hal-02540096v1
	Regulation of Pyridine Nucleotide Metabolism During Tomato Fruit Development Through Transcript and Protein Profiling. Guillaume Decros , Bertrand Beauvoit , Sophie Colombie , Cecile Cabasson , Stéphane Bernillon Frontiers in Plant Science, 2019, 10, pp.1201. ⟨10.3389/fpls.2019.01201⟩ Journal articles hal-02620533v1
	Get the Balance Right: ROS Homeostasis and Redox Signalling in Fruit Guillaume Decros , Pierre Baldet , Bertrand Beauvoit , Rebecca Stevens , Amélie Flandin Frontiers in Plant Science, 2019, 10, pp.1-16. ⟨10.3389/fpls.2019.01091⟩ Journal articles hal-02619141v1
	Central Metabolism Is Tuned to the Availability of Oxygen in Developing Melon Fruit Kentaro Mori , Bertrand Beauvoit , Benoit Biais , Maxime Chabane , J. William Allwood Frontiers in Plant Science, 2019, 10, pp.594. ⟨10.3389/fpls.2019.00594⟩ Journal articles hal-02621412v1
	Omeprazole Treatment Enhances Nitrogen Use Efficiency Through Increased Nitrogen Uptake and Assimilation in Corn. Michael James van Oosten , Emilia Dell'Aversana , Alessandra Ruggiero , Valerio Cirillo , Yves Gibon Frontiers in Plant Science, 2019, 10, pp.1507. ⟨10.3389/fpls.2019.01507⟩ Journal articles hal-02628214v1
	Wine yeast phenomics: A standardized fermentation method for assessing quantitative traits of Saccharomyces cerevisiae strains in enological conditions Emilien Peltier , Margaux Bernard , Marine Trujillo , Duyên Prodhomme , Jean-Christophe Barbe PLoS ONE, 2018, 13 (1), pp.1-23. ⟨10.1371/journal.pone.0190094⟩ Journal articles hal-02622804v1
	Integrating proteomics and enzymatic profiling to decipher seed metabolism affected by temperature in seed dormancy and germination. Qiong Xia , Ponnaiah Maharajah , Gwendal Cueff , Loic Rajjou , Duyên Prodhomme Plant Science, 2018, 269, pp.118-125. ⟨10.1016/j.plantsci.2018.01.014⟩ Journal articles hal-02623778v1
	CORRECTION: Exploiting the Genetic Diversity of Maize Using a Combined Metabolomic, Enzyme Activity Profiling, and Metabolic Modelling Approach to Link Leaf Physiology to Kernel Yield. Rafael Canas-Pendon Canas , Zhazira Yesbergenova-Cuny , Margaret Simons , Fabien Chardon , Patrick P. Armengaud The Plant cell, 2018, 30, pp.946. ⟨10.1105/tpc.18.00273⟩ Journal articles hal-02624574v1
	Putting primary metabolism into perspective to obtain better fruits Bertrand Beauvoit , Isma Belouah , Nadia Bertin , Coffi Belmys Cakpo , Sophie Colombie Annals of Botany, inPress, 122 (1), pp.1-21. ⟨10.1093/aob/mcy057⟩ Journal articles hal-02539159v1
	Constraint-based modeling highlights cell energy, redox status and α-ketoglutarate availability as metabolic drivers for anthocyanin accumulation in grape cells under nitrogen limitation Eric Soubeyrand , Sophie Colombié , Bertrand Beauvoit , Zhanwu Dai , Stéphanie Cluzet Frontiers in Plant Science, 2018, 9, pp.1-14. ⟨10.3389/fpls.2018.00421⟩ Journal articles hal-02533089v1
	Identification and functional study of a mild allele of SlDELLA gene conferring the potential for improved yield in tomato Yoshihito Shinozaki , Kentaro Ezura , Jianhong Hu , Yoshihiro Okabe , Camille Benard Scientific Reports, inPress, 8 (1), pp.12043. ⟨10.1038/s41598-018-30502-w⟩ Journal articles hal-02536736v1
	Impacts of Paraburkholderia phytofirmans Strain PsJN on Tomato (Lycopersicon esculentum L.) Under High Temperature Alaa Issa , Qassim Esmaeel , Lisa Sanchez , Barbara Courteaux , Jean-Francois Guise Frontiers in Plant Science, 2018, 9, pp.1397. ⟨10.3389/fpls.2018.01397⟩ Journal articles hal-02620887v1
	Comparative metabolomics and glycolysis enzyme profiling of embryogenic and nonembryogenic grape cells Jonathan Parrilla , Cécile Gaillard , Jérémy Verbeke , Mickael Maucourt , Radoslav Aleksandrov FEBS Open Bio, 2018, 8 (5), pp.784 - 798. ⟨10.1002/2211-5463.12415⟩ Journal articles hal-01891843v1
	Metabotyping of 30 maize hybrids under early-sowing conditions reveals potential marker-metabolites for breeding Nadia Lamari , Vanessa Zhendre , Maria Urrutia , Stéphane Bernillon , Mickael Maucourt Metabolomics, 2018, 14 (10), pp.132. ⟨10.1007/s11306-018-1427-8⟩ Journal articles hal-02539641v1
	Differences in Blossom-end Rot Resistance in Tomato Cultivars is Associated with Total Ascorbate rather than Calcium Concentration in the Distal End Part of Fruits per se Rached Moalla , Pierre Baldet , Yves Gibon , Chiaki Matsukura , Toru Ariizumi Horticulture Journal, 2018, 87 (3), pp.372-381. ⟨10.2503/hortj.OKD-150⟩ Journal articles hal-02621909v1
	Corrigendum to "Integrating proteomics and enzymatic profiling to decipher seed metabolism affected by temperature in seed dormancy and germination" [Plant Sci. 269 (2018) 118-125] Qiong Xia , Maharajah Ponnaiah , Gwendal Cueff , Loic Rajjou , Duyên Prodhomme Plant Science, 2018, 269, pp.118-125. ⟨10.1016/j.plantsci.2018.05.002⟩ Journal articles hal-02621883v1
	1H-NMR metabolomic profiling reveals a distinct metabolic recovery response in shoots and roots of temporarily drought-stressed sugar beets. Rita Wedeking , Mickael Maucourt , Catherine Deborde , Annick Moing , Yves Gibon PLoS ONE, 2018, 13 (5), pp.e0196102. ⟨10.1371/journal.pone.0196102⟩ Journal articles hal-02622637v1
	Dissection of the molecular bases of genotype x environment interactions: a study of phenotypic plasticity of Saccharomyces cerevisiae in grape juices Emilien Peltier , Vikas Sharma , Maria Marti Raga , Miguel Roncoroni , Margaux Bernard BMC Genomics, 2018, 19 (1), pp.1-20. ⟨10.1186/s12864-018-5145-4⟩ Journal articles hal-02620975v1
	Exploiting the Genetic Diversity of Maize Using a Combined Metabolomic, Enzyme Activity Profiling, and Metabolic Modeling Approach to Link Leaf Physiology to Kernel Yield. Rafael Canas-Pendon , Zhazira Yesbergenova-Cuny , Margaret Simons , Fabien Chardon , Patrick Armengaud The Plant cell, 2017, 29 (5), pp.919-943. ⟨10.1105/tpc.16.00613⟩ Journal articles hal-01605953v1
	The role of potassium on maize leaf carbon exportation under drought condition Elsa Martineau , Jean-Christophe Domec , Alexandre Bosc , Masako Dannoura , Yves Gibon Acta Physiologiae Plantarum, 2017, 39 (10), pp.1-13. ⟨10.1007/s11738-017-2515-5⟩ Journal articles hal-02625796v1
	Microvine: A New Model to Study Grapevine Growth and Developmental Patterns and their Responses to Elevated Temperature Nathalie Luchaire , Markus Rienth , Charles Romieu , Ajit Nehe , Ratthaphon Chatbanyong American Journal of Enology and Viticulture, 2017, 68 (3), pp.283-292. ⟨10.5344/ajev.2017.16066⟩ Journal articles hal-01602636v1
	QTL Analyses in Multiple Populations Employed for the Fine Mapping and Identification of Candidate Genes at a Locus Affecting Sugar Accumulation in Melon (Cucumis melo L.). Jason M Argyris , Aurora Díaz , Valentino Ruggieri , Marta Fernández , Torben Jahrmann Frontiers in Plant Science, 2017, 8, pp.1679. ⟨10.3389/fpls.2017.01679⟩ Journal articles hal-02628388v1
	Combined Alternaria dauci infection and water stresses impact carotenoid content of carrot leaves and roots Florent Perrin , Sébastien Huet , Cécile Dubois-Laurent , Yves Gibon , Sylvie Citerne Environmental and Experimental Botany, 2017, 143, pp.125-134. ⟨10.1016/j.envexpbot.2017.09.004⟩ Journal articles hal-02053534v1
	Bryophyte gas-exchange dynamics along varying hydration status reveal a significant carbonyl sulphide (COS) sink in the dark and COS source in the light Teresa E. Gimeno , Jérôme Ogée , Jessica Royles , Yves Gibon , Jason B. West New Phytologist, 2017, 215 (3), pp.965-976. ⟨10.1111/nph.14584⟩ Journal articles hal-01606784v1
	Measurement of Tricarboxylic Acid Cycle Enzyme Activities in Plants. Rebeca Patricia Omena-Garcia , Wagner L Araújo , Yves Gibon , Alisdair R Fernie , Adriano Nunes-Nesi Methods in Molecular Biology, 2017, 1670, pp.167-182. ⟨10.1007/978-1-4939-7292-0_14⟩ Journal articles hal-02620390v1
	Correlation-Based Network Analysis of Metabolite and Enzyme Profiles Reveals a Role of Citrate Biosynthesis in Modulating N and C Metabolism in Zea mays. David Toubiana , Wentao Xue , Nengyi Zhang , Karl Kremling , Amit Gur Frontiers in Plant Science, 2016, 7, pp.1022. ⟨10.3389/fpls.2016.01022⟩ Journal articles hal-02632485v1
	A new genomic library of melon introgression lines in a cantaloupe genetic background for dissecting desirable agronomical traits Gorka Perpiñá , Cristina Esteras , Yves Y. Gibon , Antonio J Monforte , Belén Picó BMC Plant Biology, 2016, 16 (1), pp.1-21. ⟨10.1186/s12870-016-0842-0⟩ Journal articles hal-02640341v1
	Respiration climacteric in tomato fruits elucidated by constraint-based modelling. Sophie Colombié , Bertrand Beauvoit , Christine Nazaret , Camille Bénard , Gilles Vercambre New Phytologist, 2016, 213 (4), pp.1726-1739. ⟨10.1111/nph.14301⟩ Journal articles hal-01445653v1
	Fortune telling: metabolic markers of plant performance Olivier Fernandez , Maria Urrutia , Stéphane Bernillon , Catherine Giauffret , Francois F. Tardieu Metabolomics, 2016, 12 (10), ⟨10.1007/s11306-016-1099-1⟩ Journal articles hal-02637624v1
	Is change in ovary carbon status a cause or a consequence of maize ovary abortion in water deficit during flowering? Vincent Oury , Cecilio Frois Caldeira , Duyên D. Prodhomme , Jean-Philippe Pichon , Yves Y. Gibon Plant Physiology, 2016, 71 (2), pp.997-1008. ⟨10.1104/pp.15.01130⟩ Journal articles hal-02631520v1
	Bread wheat (Triticum aestivum L.) grain protein concentration is related to early post-flowering nitrate uptake under putative control of plant satiety level François Taulemesse , Jacques Le Gouis , David Gouache , Yves Y. Gibon , Vincent Allard PLoS ONE, 2016, 11 (2), ⟨10.1371/journal.pone.0149668⟩ Journal articles hal-02637335v1
	A multi-Ievel omic approach of tomato fruit quality Jiaxin Xu , Laura Pascual-Banuls , Nelly Desplat , Mireille Faurobert , Yves Gibon Acta Horticulturae, 2015, 1099, pp.793-800. ⟨10.17660/ActaHortic.2015.1099.100⟩ Journal articles hal-01543456v1
	The intrinsically disordered protein LEA7 from Arabidopsis thaliana protects the isolated enzyme lactate dehydrogenase and enzymes in a soluble leaf proteome during freezing and drying. Antoaneta V Popova , Saskia Rausch , Michaela Hundertmark , Yves Y. Gibon , Dirk K Hincha Biochimica et Biophysica Acta Proteins and Proteomics, 2015, 1854, pp.1517-1525. ⟨10.1016/j.bbapap.2015.05.002⟩ Journal articles hal-02630310v1
	Phenotypic and genetic dissection of component traits for early vigour in rice using plant growth modelling, sugar content analyses and association mapping. M C Rebolledo , M Dingkuhn , Brigitte Courtois , Yves Y. Gibon , Anne Clément-Vidal Journal of Experimental Botany, 2015, 66 (18), pp.5555-66. ⟨10.1093/jxb/erv258⟩ Journal articles hal-02636970v1
	Genome-wide association of carbon and nitrogen metabolism in the maize nested association mapping population. Nengyi Zhang , Yves Y. Gibon , Jason G Wallace , Nicholas Lepak , Pinghua Li Plant Physiology, 2015, 168 (2), pp.575-83. ⟨10.1104/pp.15.00025⟩ Journal articles hal-02635325v1
	Short-and long-term effects of carbohydrate limitation on sugar and organic acid accumulation during mandarin fruit growth Sandrine Antoine , Olivier Pailly , Yves Gibon , Luro François , Jérémie Santini Journal of the Science of Food and Agriculture, 2015, 96 (11), pp.3906-3914. ⟨10.1002/jsfa.7594⟩ Journal articles hal-01291670v1
	Post-flowering nitrate uptake in wheat is controlled by N status at flowering, with a putative major role of root nitrate transporter NRT2.1. François Taulemesse , Jacques Le Gouis , David Gouache , Yves Y. Gibon , Vincent Allard PLoS ONE, 2015, 10 (3), ⟨10.1371/journal.pone.0120291⟩ Journal articles hal-02636975v1
	Biochemical characterization of the primary metabolism and antioxidant defence systems of acidic and acidless citrus genotypes during the major stages of fruit growth Julie Oustric , Sandrine Antoine , Jean Giannettini , Yves Gibon , Luro François Acta Physiologiae Plantarum, 2015, 37 (11), pp.228. ⟨10.1007/s11738-015-1982-9⟩ Journal articles hal-01291656v1
	Non-structural carbohydrates in woody plants compared among laboratories Audrey G. Quentin , Elizabeth A. Pinkard , Michael G. Ryan , David T. Tissue , L. Scott Baggett Tree Physiology, 2015, 35 (11), pp.1146-1165. ⟨10.1093/treephys/tpv073⟩ Journal articles hal-01557364v1
	Comparative transcriptional profiling analysis of developing melon (Cucumis melo L.) fruit from climacteric and non-climacteric varieties. Montserrat Saladié , Joaquin Canizares , Michael A Phillips , Manuel Rodríguez-Concepción , Christian Larrigaudiere BMC Genomics, 2015, 16, pp.440. ⟨10.1186/s12864-015-1649-3⟩ Journal articles hal-02640926v1
	Modelling central metabolic fluxes by constraint-based optimization reveals metabolic reprogramming of developing Solanum lycopersicum (tomato) fruit. Sophie Colombié , Christine Nazaret , Camille Bénard , Benoît Biais , Virginie Mengin The Plant Journal, 2015, 81 (1), pp.24-39. ⟨10.1111/tpj.12685⟩ Journal articles hal-01445680v1
	Transcriptional and metabolic alternations rebalance wheat grain storage protein accumulation under variable nitrogen and sulfur supply Zhanwu Dai , Anne A. Plessis , Jonathan Vincent , Nathalie N. Duchateau , Alicia Besson The Plant Journal, 2015, 83 (2), pp.326-343. ⟨10.1111/tpj.12881⟩ Journal articles hal-02042399v1
	Metabolomic profiling in tomato reveals diel compositional changes in fruit affected by source-sink relationships. Camille Bénard , Stéphane Bernillon , Benoit Biais , Sonia Osorio , Mickael M. Maucourt Journal of Experimental Botany, 2015, 66 (11), pp.3391-404. ⟨10.1093/jxb/erv151⟩ Journal articles hal-02641303v1
	Overexpression of plastid transketolase in tobacco results in a thiamine auxotrophic phenotype. Mahdi Khozaei , Stuart Fisk , Tracy Lawson , Yves Y. Gibon , Ronan Sulpice The Plant cell, 2015, 27 (2), pp.432-47. ⟨10.1105/tpc.114.131011⟩ Journal articles hal-02634460v1
	Model-Assisted Analysis of Sugar Metabolism throughout Tomato Fruit Development Reveals Enzyme and Carrier Properties in Relation to Vacuole Expansion. Bertrand Beauvoit , Sophie Colombié , Antoine Monier , Marie-Hélène Andrieu , Benoit Biais The Plant cell, 2014, 26 (8), pp.3224-3242. ⟨10.1105/tpc.114.127761⟩ Journal articles hal-01058814v1
	Metabolite Profiling and Integrative Modeling Reveal Metabolic Constraints for Carbon Partitioning under Nitrogen-Starvation in the Green Alga Haematococcus pluvialis. Lee Recht , Nadine Töpfer , Albert Batushansky , Noga Sikron , Aliza Zarka Journal of Biological Chemistry, 2014, 289 (44), pp.30387-30403. ⟨10.1074/jbc.M114.555144⟩ Journal articles hal-02639565v1
	Why measure enzyme activities in the era of systems biology? Mark Stitt , Yves Y. Gibon Trends in Plant Science, 2014, 19 (4), pp.256-65. ⟨10.1016/j.tplants.2013.11.003⟩ Journal articles hal-02631238v1
	Association Mapping across Numerous Traits Reveals Patterns of Functional Variation in Maize. Jason G Wallace , Peter J Bradbury , Nengyi Zhang , Yves Y. Gibon , Mark Stitt PLoS Genetics, 2014, 10 (12), pp.e1004845. ⟨10.1371/journal.pgen.1004845⟩ Journal articles hal-02640763v1
	Remarkable reproducibility of enzyme activity profiles in tomato fruits grown under contrasting environments provides a roadmap for studies of fruit metabolism. Benoit Biais , Camille Bénard , Bertrand Beauvoit , Sophie S. Colombie , Duyên D. Prodhomme Plant Physiology, 2014, 164, pp.1204-1221. ⟨10.1104/pp.113.231241⟩ Journal articles hal-02639362v1
	Profiling sugar metabolism during fruit development in a peach progeny with different fructose-to-glucose ratios. Elsa Desnoues , Yves Y. Gibon , Valentina Baldazzi , Veronique Signoret , Michel M. Génard BMC Plant Biology, 2014, 14 (1), pp.336 : 1-12. ⟨10.1186/s12870-014-0336-x⟩ Journal articles hal-02631892v1
	Ozone affects ascorbate and glutathione biosynthesis as well as amino acid contents in three Euramerican poplar genotypes J. Dumont , S. Keski-Saari , M. Keinanen , D. Cohen , N. Ningre Tree Physiology, 2014, 34 (3), pp.253 - 266. ⟨10.1093/treephys/tpu004⟩ Journal articles hal-01555992v1
	Metabolic studies in plant organs: don't forget dilution by growth Michel M. Génard , Valentina Baldazzi , Yves Y. Gibon Frontiers in Plant Science, 2014, 5, pp.1-5. ⟨10.3389/fpls.2014.00085⟩ Journal articles hal-02636620v1
	Silencing of the tomato Sugar Partitioning Affecting protein (SPA) modifies sink strength through a shift in leaf sugar metabolism. Luisa Bermúdez , Fabiana de Godoy , Pierre Baldet , Diego Demarco , Sonia Osorio The Plant Journal, 2014, 77 (5), pp.676-87. ⟨10.1111/tpj.12418⟩ Journal articles hal-02640583v1
	Why bring post-genomics into the phosphorus-impoverished bush? Yves Y. Gibon Plant, Cell and Environment, 2014, 37 (6), pp.1273-5. ⟨10.1111/pce.12265⟩ Journal articles hal-02640750v1
	Resolving the Role of Plant Glutamate Dehydrogenase: II. Physiological Characterization of Plants Overexpressing the Two Enzyme Subunits Individually or Simultaneously. Therese Tercé-Laforgue , Magali Bedu , Céline Dargel-Graffin , Frédéric Dubois , Yves Gibon Plant and Cell Physiology, 2013, 54 (10), ⟨10.1093/pcp/pct108⟩ Journal articles hal-01190621v1
	A fluorometric assay for trehalose in the picomole range Petronia Carillo , Regina Feil , Yves Y. Gibon , Namiko Satoh-Nagasawa , David Jackson Plant Methods, 2013, 9 (1), pp.21. ⟨10.1186/1746-4811-9-21⟩ Journal articles hal-02645455v1
	Deciphering genetic diversity and inheritance of tomato fruit weight and composition through a systems biology approach Laura Pascual-Banuls , Jiaxin Xu , Benoit Biais , Mickael Maucourt , Patricia Ballias Journal of Experimental Botany, 2013, 64 (18), pp.1-16. ⟨10.1093/jxb/ert349⟩ Journal articles hal-01208665v1
	SlARF4, an auxin response factor involved in the control of sugar metabolism during tomato fruit development Maha Sagar , Christian Chervin , Isabelle Mila , Yanwei Hao , Jean-Paul Roustan Plant Physiology, 2013, 161 (3), pp.1362-1374. ⟨10.1104/pp.113.213843⟩ Journal articles hal-02648494v1
	Metabolomic and elemental profiling of melon fruit quality as affected by genotype and environment Stéphane Bernillon , Benoit Biais , Catherine Deborde , Mickael M. Maucourt , Cécile Cabasson Metabolomics, 2013, 9 (1), pp.57-77. ⟨10.1007/s11306-012-0429-1⟩ Journal articles hal-02651407v1
	Impact of the carbon and nitrogen supply on relationships and connectivity between metabolism and biomass in a broad panel of Arabidopsis accessions. Ronan Sulpice , Zoran Nikoloski , Hendrik Tschoep , Carla Antonio , Sabrina Kleessen Plant Physiology, 2013, 162 (1), pp.347-63. ⟨10.1104/pp.112.210104⟩ Journal articles hal-01066953v1
	Stress-induced GSK3 regulates the redox stress response by phosphorylating glucose-6-phosphate dehydrogenase in Arabidopsis Sylvia Dal Santo , Hansjörg Stampfl , Julia Krasensky , Stefan Kempa , Yves Y. Gibon The Plant cell, 2012, 24 (8), pp.3380-3392. ⟨10.1105/tpc.112.101279⟩ Journal articles hal-02647870v1
	Mutagenesis of cysteine 81 prevents dimerization of the APS1 subunit of ADP-glucose pyrophosphorylase and alters diurnal starch turnover in Arabidopsis thaliana leaves Nadja Hädrich , Janneke H.M. Hendriks , Oliver Kötting , Stéphanie Arrivault , Regina Feil The Plant Journal, 2012, 70 (2), pp.231-242. ⟨10.1111/j.1365-313X.2011.04860.x⟩ Journal articles hal-02644594v1
	The art of growing plants for experimental purposes: a practical guide for the plant biologist Hendrik Poorter , Fabio Fiorani , Max Planck , Uli Schurr , Alex Finck Functional Plant Biology, 2012, 39 (10-11), pp.821-838. ⟨10.1071/FP12028⟩ Journal articles hal-02644389v1
	Characterization of a NADH-dependent glutamate dehydrogenase mutant of [i]Arabidopsis[/i] demonstrates the key role of this enzyme in root carbon and nitrogen metabolism Jean-Xavier J.-X. Fontaine , Therese Tercé-Laforgue , Patrick Armengaud , Gilles Clément , Jean-Pierre Renou The Plant cell, 2012, 24 (10), pp.4044-4065. ⟨10.1105/tpc.112.103689⟩ Journal articles hal-01019522v1
	Water deficits uncouple growth from photosynthesis, increase C content, and modify the relationships between C and growth in sink organs Bertrand Muller , Florent Pantin , Michel M. Génard , Olivier Turc , Sandra Freixes Journal of Experimental Botany, 2011, 62 (6), pp.1715-1729. ⟨10.1093/jxb/erq438⟩ Journal articles hal-02650675v1
	Identification of enzyme activity quantitative trait loci in a Solanum lycopersicum x Solanum pennellii introgression line population Marie-Caroline Steinhauser , Dirk Steinhauser , Yves Y. Gibon , Marie Bolger , Stéphanie Arrivault Plant Physiology, 2011, 157 (3), pp.998-1014. ⟨10.1104/pp.111.181594⟩ Journal articles hal-02652389v1
	Use of TILLING and robotised enzyme assays to generate an allelic series of Arabidopsis thaliana mutants with altered ADP-glucose pyrophosphorylase activity Nadja Hädrich , Yves Y. Gibon , Christian Schudoma , Thomas Altmann , John E. Lunn Journal of Plant Physiology, 2011, 168 (12), pp.1395-1405. ⟨10.1016/j.jplph.2011.01.013⟩ Journal articles hal-02646438v1
	Extensive metabolic cross-talk in melon fruit revealed by spatial and developmental combinatorial metabolomics Annick Moing , Asaph Aharoni , Benoit Biais , Ilana Rogachev , Sagit Meir New Phytologist, 2011, 190 (3), pp.683-696. ⟨10.1111/j.1469-8137.2010.03626.x⟩ Journal articles hal-02644457v1
	Modelling temperature-compensated physiological rates, based on the co-ordination of responses to temperature of developmental processes Boris Parent , Olivier Turc , Yves Y. Gibon , Francois F. Tardieu Journal of Experimental Botany, 2010, 61 (8), pp.2057-2069. ⟨10.1093/jxb/erq003⟩ Journal articles hal-02664371v1
	Arabidopsis has a cytosolic fumarase required for the massive allocation of photosynthate into fumaric acid and for rapid plant growth on high nitrogen Itsara Pracharoenwattana , Wenxu Zhou , Olivier Keech , Perigio B. Francisco , Thanikan Udomchalothorn The Plant Journal, 2010, 62 (5), pp.785-795. ⟨10.1111/j.1365-313X.2010.04189.x⟩ Journal articles hal-02663727v1
	Arabidopsis plants acclimate to water deficit at low cost through changes of carbon usage: an integrated perspective using growth, metabolite, enzyme, and gene expression analysis Irène Hummel , Florent Pantin , Ronan Sulpice , Maria Piques , Gaelle Rolland Plant Physiology, 2010, 154 (1), pp.357-372. ⟨10.1104/pp.110.157008⟩ Journal articles hal-02662264v1
	Enzyme activity profiles during fruit development in tomato cultivars and Solanum pennellii Marie-Caroline Steinhauser , Dirk Steinhauser , Karin Koehl , Fernando Carrari , Yves Y. Gibon Plant Physiology, 2010, 153 (1), pp.80-98. ⟨10.1104/pp.110.154336⟩ Journal articles hal-02666951v1
	Functional analysis of the anaphase promoting complex activator CCS52A highlights the crucial role of endo-reduplication for fruit growth in tomato Elodie Mathieu-Rivet , Frederic Gevaudant , Adrien Sicard , Sophie Salar , Phuc Thi Do The Plant Journal, 2010, 62 (5), pp.727 - 741. ⟨10.1111/j.1365-313X.2010.04198.x⟩ Journal articles hal-01848369v1
	Genetic analysis of central carbon metabolism unveils an amino acid substitution that alters maize NAD-dependent isocitrate dehydrogenase activity Nengyi Zhang , Amit Gur , Yves Y. Gibon , Ronan Sulpice , Sherry Flint-Garcia PLoS ONE, 2010, 5 (4), pp.e9991. ⟨10.1371/journal.pone.0009991⟩ Journal articles hal-02656778v1
	Xeml Lab: a tool that supports the design of experiments at a graphical interface and generates computer-readable metadata files, which capture information about genotypes, growth conditions, environmental perturbations and sampling strategy Jan Hannemann , Hendrik Poorter , Björn Usadel , Oliver E. Bläsing , Alex Finck Plant, Cell and Environment, 2009, 32 (9), pp.1185-1200. ⟨10.1111/j.1365-3040.2009.01964.x⟩ Journal articles hal-02666866v1
	Adjustment of growth, starch turnover, protein content and central metabolism to a decrease of the carbon supply when Arabidopsis is grown in very short photoperiods Yves Y. Gibon , Eva Theresa Pyl , Ronan Sulpice , John E. Lunn , Mélanie Höne Plant, Cell and Environment, 2009, 32 (7), pp.859-874. ⟨10.1111/j.1365-3040.2009.01965.x⟩ Journal articles hal-02663846v1
	Adjustment of growth and central metabolism to a mild but sustained nitrogen-limitation in Arabidopsis Hendrik Tschoep , Yves Gibon , Petronia Carillo , Patrick Armengaud , Marek Szecowka Plant, Cell and Environment, 2009, 32 (3), pp.300-318. ⟨10.1111/j.1365-3040.2008.01921.x⟩ Journal articles hal-03321612v1
	Absence of Symbiotic Leghemoglobins Alters Bacteroid and Plant Cell Differentiation During Development of Lotus japonicus Root Nodules Thomas Ott , John Sullivan , Euan James , Emmanouil Flemetakis , Catrin Günther Molecular Plant-Microbe Interactions, 2009, 22 (7), pp.800-808. ⟨10.1094/mpmi-22-7-0800⟩ Journal articles hal-03321616v1
	Starch as a major integrator in the regulation of plant growth R. Sulpice , E.-T. Pyl , H. Ishihara , S. Trenkamp , M. Steinfath Proceedings of the National Academy of Sciences of the United States of America, 2009, 106 (25), pp.10348-10353. ⟨10.1073/pnas.0903478106⟩ Journal articles hal-03321614v1
	Multilevel Analysis of Primary Metabolism Provides New Insights into the Role of Potassium Nutrition for Glycolysis and Nitrogen Assimilation in Arabidopsis Roots Patrick Armengaud , Ronan Sulpice , Anthony Miller , Mark Stitt , Anna Amtmann Plant Physiology, 2009, 150 (2), pp.772-785. ⟨10.1104/pp.108.133629⟩ Journal articles hal-03321613v1
	Ribosome and transcript copy numbers, polysome occupancy and enzyme dynamics in Arabidopsis Maria Piques , Waltraud X. Schulze , Melanie Höhne , Björn Usadel , Yves Y. Gibon Molecular Systems Biology, 2009, 5, pp.314 : 1-17. ⟨10.1038/msb.2009.68⟩ Journal articles hal-02666439v1
	High-throughput functional assessment of polysaccharide-active enzymes using matrix-assisted laser desorption/ionization–time-of-flight mass spectrometry as exemplified on plant cell wall polysaccharides Edouard Leboeuf , Peter Immerzeel , Yves Gibon , Martin Steup , Markus Pauly Analytical Biochemistry, 2008, 373 (1), pp.9-17. ⟨10.1016/j.ab.2007.10.007⟩ Journal articles hal-03321607v1
	Multilevel genomic analysis of the response of transcripts, enzyme activities and metabolites in Arabidopsis rosettes to a progressive decrease of temperature in the non-freezing range Björn Usadel , Oliver Bläsing , Yves Gibon , Fabien Poree , Melanie Höhne Plant, Cell and Environment, 2008, 31 (4), pp.518-547. ⟨10.1111/j.1365-3040.2007.01763.x⟩ Journal articles hal-03321608v1
	Integrative analyses of genetic variation in enzyme activities of primary carbohydrate metabolism reveal distinct modes of regulation in Arabidopsis thaliana Joost Jb Keurentjes , Ronan Sulpice , Yves Gibon , Marie-Caroline Steinhauser , Jingyuan Fu Genome Biology, 2008, 9 (8), pp.R129. ⟨10.1186/gb-2008-9-8-r129⟩ Journal articles hal-03321606v1
	Multilevel genomics analysis of carbon signalling during low carbon availability: coordinating the supply and utilisation of carbon in a fluctuating environment Mark Stitt , Yves Gibon , John Lunn , Maria Piques Functional Plant Biology, 2007, 34 (6), pp.526. ⟨10.1071/fp06249⟩ Journal articles hal-03321597v1
	The enigmatic contribution of mitochondrial function in photosynthesis A. Nunes-Nesi , R. Sulpice , Y. Gibon , A. Fernie Journal of Experimental Botany, 2007, 59 (7), pp.1675-1684. ⟨10.1093/jxb/ern002⟩ Journal articles hal-03321602v1
	Description and applications of a rapid and sensitive non-radioactive microplate-based assay for maximum and initial activity of D-ribulose-1,5-bisphosphate carboxylase/oxygenase Ronan Sulpice , Hendrik Tschoep , Maria von Korff , Dirk Büssis , Björn Usadel Plant, Cell and Environment, 2007, 30 (9), pp.1163-1175. ⟨10.1111/j.1365-3040.2007.01679.x⟩ Journal articles hal-03321604v1
	Genome-wide reprogramming of metabolism and regulatory networks of Arabidopsis in response to phosphorus Rosa Morcuende , Rajendra Bari , Yves Gibon , Wenming Zheng , Bikram Datt Pant Plant, Cell and Environment, 2007, 30 (1), pp.85-112. ⟨10.1111/j.1365-3040.2006.01608.x⟩ Journal articles hal-03321598v1
	Temporal responses of transcripts, enzyme activities and metabolites after adding sucrose to carbon-deprived Arabidopsis seedlings Daniel Osuna , Bjorn Usadel , Rosa Morcuende , Yves Gibon , Oliver Bläsing The Plant Journal, 2007, 49 (3), pp.463-491. ⟨10.1111/j.1365-313x.2006.02979.x⟩ Journal articles hal-03321599v1
	GC-EI-TOF-MS analysis of in vivo carbon-partitioning into soluble metabolite pools of higher plants by monitoring isotope dilution after 13CO2 labelling Jan Huege , Ronan Sulpice , Yves Gibon , Jan Lisec , Karin Koehl Phytochemistry, 2007, 68 (16-18), pp.2258-2272. ⟨10.1016/j.phytochem.2007.03.026⟩ Journal articles hal-03321603v1
	Deficiency of mitochondrial fumarase activity in tomato plants impairs photosynthesis via an effect on stomatal function Adriano Nunes-Nesi , Fernando Carrari , Yves Gibon , Ronan Sulpice , Anna Lytovchenko The Plant Journal, 2007, 50 (6), pp.1093-1106. ⟨10.1111/j.1365-313x.2007.03115.x⟩ Journal articles hal-03321601v1
	Variation of Enzyme Activities and Metabolite Levels in 24 Arabidopsis Accessions Growing in Carbon-Limited Conditions Joanna Cross , Maria von Korff , Thomas Altmann , Linda Bartzetko , Ronan Sulpice Plant Physiology, 2006, 142 (4), pp.1574-1588. ⟨10.1104/pp.106.086629⟩ Journal articles hal-03321593v1
	Integration of metabolite with transcript and enzyme activity profiling during diurnal cycles in Arabidopsis rosettes Yves Gibon , Bjoern Usadel , Oliver Blaesing , Beate Kamlage , Melanie Hoehne Genome Biology, 2006, 7 (8), pp.R76. ⟨10.1186/gb-2006-7-8-r76⟩ Journal articles hal-03321591v1
	Increased C availability at elevated carbon dioxide concentration improves N assimilation in a legume Alistair Rogers , Yves Gibon , Mark Stitt , Patrick Morgan , Carl Bernacchi Plant, Cell and Environment, 2006, 29 (8), pp.1651-1658. ⟨10.1111/j.1365-3040.2006.01549.x⟩ Journal articles hal-03321592v1
	Sugar-induced increases in trehalose 6-phosphate are correlated with redox activation of ADPglucose pyrophosphorylase and higher rates of starch synthesis in Arabidopsis thaliana John E Lunn , Regina Feil , Janneke Hm Hendriks , Yves Gibon , Rosa Morcuende Biochemical Journal, 2006, 397 (1), pp.139-148. ⟨10.1042/BJ20060083⟩ Journal articles hal-00478514v1
	Does elevated atmospheric [CO2] alter diurnal C uptake and the balance of C and N metabolites in growing and fully expanded soybean leaves? E. Ainsworth , A. Rogers , A. Leakey , L. Heady , Y. Gibon Journal of Experimental Botany, 2006, 58 (3), pp.579-591. ⟨10.1093/jxb/erl233⟩ Journal articles hal-03321596v1
	PageMan: An interactive ontology tool to generate, display, and annotate overview graphs for profiling experiments Björn Usadel , Axel Nagel , Dirk Steinhauser , Yves Gibon , Oliver Bläsing BMC Bioinformatics, 2006, 7 (1), ⟨10.1186/1471-2105-7-535⟩ Journal articles hal-03321595v1
	Identification and Characterisation of the α and β Subunits of Succinyl CoA Ligase of Tomato Claudia Studart-Guimarães , Yves Gibon , Nicolás Frankel , Craig Wood , María Inés Zanor Plant Molecular Biology, 2005, 59 (5), pp.781-791. ⟨10.1007/s11103-005-1004-1⟩ Journal articles hal-03321588v1
	GMD@CSB.DB: the Golm Metabolome Database J. Kopka , N. Schauer , S. Krueger , C. Birkemeyer , B. Usadel Bioinformatics, 2005, 21 (8), pp.1635-1638. ⟨10.1093/bioinformatics/bti236⟩ Journal articles hal-03321585v1
	Extension of the Visualization Tool MapMan to Allow Statistical Analysis of Arrays, Display of Coresponding Genes, and Comparison with Known Responses Björn Usadel , Axel Nagel , Oliver Thimm , Henning Redestig , Oliver Blaesing Plant Physiology, 2005, 138 (3), pp.1195-1204. ⟨10.1104/pp.105.060459⟩ Journal articles hal-03321587v1
	Sugars and Circadian Regulation Make Major Contributions to the Global Regulation of Diurnal Gene Expression in Arabidopsis Oliver Bläsing , Yves Gibon , Manuela Günther , Melanie Höhne , Rosa Morcuende The Plant cell, 2005, 17 (12), pp.3257-3281. ⟨10.1105/tpc.105.035261⟩ Journal articles hal-03321589v1
	Expression of a yeast acetyl CoA hydrolase in the mitochondrion Lilia Bender-Machado , Michael Bäuerlein , Fernando Carrari , Nicolas Schauer , Anna Lytovchenko Plant Molecular Biology, 2004, 55 (5), pp.645-662. ⟨10.1007/s11103-004-1557-4⟩ Journal articles hal-03321583v1
	mapman: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes Oliver Thimm , Oliver Bläsing , Yves Gibon , Axel Nagel , Svenja Meyer The Plant Journal, 2004, 37 (6), pp.914-939. ⟨10.1111/j.1365-313x.2004.02016.x⟩ Journal articles hal-03321582v1
	Metabolite profiling in plant biology: platforms and destinations Joachim Kopka , Alisdair Fernie , Wolfram Weckwerth , Yves Gibon , Mark Stitt Genome Biology, 2004, 5 (6), pp.109. ⟨10.1186/gb-2004-5-6-109⟩ Journal articles hal-03321580v1
	A Robot-Based Platform to Measure Multiple Enzyme Activities in Arabidopsis Using a Set of Cycling Assays: Comparison of Changes of Enzyme Activities and Transcript Levels during Diurnal Cycles and in Prolonged Darkness[W] Yves Gibon , Oliver Blaesing , Jan Hannemann , Petronia Carillo , Melanie Höhne The Plant cell, 2004, 16 (12), pp.3304-3325. ⟨10.1105/tpc.104.025973⟩ Journal articles hal-03321584v1
	An assessment of the physiological properties of the so-called compatible solutes using in vitro experiments with leaf discs François Robert Larher , Aziz Aziz , Yves Gibon , Patricia Trotel-Aziz , Ronan Sulpice Plant Physiology and Biochemistry, 2003, 41 (6-7), pp.657-666. ⟨10.1016/s0981-9428(03)00076-7⟩ Journal articles hal-03321575v1
	ADP-Glucose Pyrophosphorylase Is Activated by Posttranslational Redox-Modification in Response to Light and to Sugars in Leaves of Arabidopsis and Other Plant Species Janneke H.M. Hendriks , Anna Kolbe , Yves Gibon , Mark Stitt , Peter Geigenberger Plant Physiology, 2003, 133 (2), pp.838-849. ⟨10.1104/pp.103.024513⟩ Journal articles hal-03321577v1
	Reduced Expression of Aconitase Results in an Enhanced Rate of Photosynthesis and Marked Shifts in Carbon Partitioning in Illuminated Leaves of Wild Species Tomato Fernando Carrari , Adriano Nunes-Nesi , Yves Gibon , Anna Lytovchenko , Marcelo Ehlers Loureiro Plant Physiology, 2003, 133 (3), pp.1322-1335. ⟨10.1104/pp.103.026716⟩ Journal articles hal-03321578v1
	Sensitive and high throughput metabolite assays for inorganic pyrophosphate, ADPGlc, nucleotide phosphates, and glycolytic intermediates based on a novel enzymic cycling system Yves Gibon , Helene Vigeolas , Axel Tiessen , Peter Geigenberger , Mark Stitt The Plant Journal, 2002, 30 (2), pp.221-235. ⟨10.1046/j.1365-313x.2001.01278.x⟩ Journal articles hal-03321314v1
	Starch Synthesis in Potato Tubers Is Regulated by Post-Translational Redox Modification of ADP-Glucose Pyrophosphorylase Axel Tiessen , Janneke Hendriks , Mark Stitt , Anja Branscheid , Yves Gibon The Plant cell, 2002, 14 (9), pp.2191-2213. ⟨10.1105/tpc.003640⟩ Journal articles hal-03321573v1
	Interaction between exogenous glycine betaine and the photorespiratory pathway in canola leaf discs Ronan Sulpice , Yves Gibon , Gabriel Cornic , François Robert Larher Physiologia Plantarum, 2002, 116 (4), pp.460-467. ⟨10.1034/j.1399-3054.2002.1160404.x⟩ Journal articles hal-03321574v1
	Proline accumulation in canola leaf discs subjected to osmotic stress is related to the loss of chlorophylls and to the decrease of mitochondrial activity Yves Gibon , Ronan Sulpice , Francois Larher Physiologia Plantarum, 2000, 110 (4), pp.469-476. ⟨10.1111/j.1399-3054.2000.1100407.x⟩ Journal articles hal-03321313v1
	Metabolic Activity Decreases as an Adaptive Response to Low Internal Oxygen in Growing Potato Tubers P. Geigenberger , A.R. Fernie , Y. Gibon , M. Christ , M. Stitt Biological Chemistry, 2000, 381 (8), ⟨10.1515/bc.2000.093⟩ Journal articles hal-03321303v1
	A Single-Step Purification for Glycine Betaine Determination in Plant Extracts by Isocratic HPLC Marie-Anne Bessieres , Yves Gibon , Jean Claude Lefeuvre , François Larher Journal of Agricultural and Food Chemistry, 1999, 47 (9), pp.3718-3722. ⟨10.1021/jf990031h⟩ Journal articles hal-03321310v1
	Exogenously supplied glycine betaine in spinach and rapeseed leaf discs: compatibility or non-compatibility? R. Sulpice , Y. Gibon , A. Bouchereau , F. Larher Plant, Cell and Environment, 1998, 21 (12), pp.1285-1292. ⟨10.1046/j.1365-3040.1998.00362.x⟩ Journal articles hal-03321309v1
	Is glycine betaine a non-compatible solute in higher plants that do not accumulate it? Y. Gibon , M. Bessieres , F. Larher Plant, Cell and Environment, 1997, 20 (3), pp.329-340. ⟨10.1046/j.1365-3040.1997.d01-82.x⟩ Journal articles hal-03321306v1
	Cycling Assay for Nicotinamide Adenine Dinucleotides: NaCl Precipitation and Ethanol Solubilization of the Reduced Tetrazolium Yves Gibon , François Larher Analytical Biochemistry, 1997, 251 (2), pp.153-157. ⟨10.1006/abio.1997.2283⟩ Journal articles hal-03321307v1

	Insights into physiological responses of different grapevine varieties to Flavescence Dorée infection: an integrated approach Loreen Larroquet , Enora Bodin , Cédric Cassan , Camille Jollard , Marie-Cecile Dufour 6. European Bois Noir workshop and 1st International Pro-AECOGY conference, UMR-1332 Fruit Biology and Pathology, University of Bordeaux and INRAE, May 2024, Bordeaux (France), France Conference papers hal-04650385v1
	Combining phenotypic, metabolome and proteome data to study maize response to a mild nitrogen deficit Maria Urrutia , Melisande Blein-Nicolas , Olivier Fernandez , Stéphane Bernillon , Mickael Maucourt Journées du Protéome Vert, Jun 2022, Gif-sur-Yette, France Conference papers hal-03878405v1
	Effet de la sécheresse sur l'expression des symptômes foliaires de l'esca Giovanni Bortolami , Gregory A. Gambetta , Cédric Cassan , Silvina Dayer , Elena Farolfi Journées Nationales des maladies du bois de la vigne, Nov 2021, Reims, France Conference papers hal-03582553v1
	An overview of NMR applications in metabolite profiling of small molecules for plant metabolism studies Catherine Deborde , Daniel Jacob , Jean-Xavier J.-X. Fontaine , R. Molinie , Léa Roch 2. International Plant Spectroscopy Conference (IPSC), Mar 2019, Berlin, Germany Conference papers hal-02786819v1
	An integrated fruit model toolkit: combining fruit biophysical processes with central carbon metabolism J.L. Chen , Bertrand Beauvoit , Sophie Colombie , Léa Roch , Coffi Belmys Cakpo Symposium on Advanced Technologies and Management for Innovative Greenhouses: GreenSys2019, Jun 2019, Angers, France. pp.401-410, ⟨10.17660/ActaHortic.2020.1296.52⟩ Conference papers hal-03125090v1
	Using metabolomic data to predict Maize yield Sylvain Prigent , Olivier Fernandez , Stéphane Bernillon , Pierre Pétriacq , Annick Moing JOBIM 2019, Jul 2019, Nantes, France. pp.151 Conference papers hal-02565229v1
	Dissecting G×E and QTL×E of maize yield in contrasting scenarios of light, heat and water deficit Emilie J. Millet , Willem Kruijer , Santiago Alvarez Prado , Llorenç Cabrera-Bosquet , Aude Coupel-Ledru XXIVth Eucarpia Maize and Sorghum Conference, TUM School of Life Sciences Weihenstephan, Oct 2019, Freising, Germany Conference papers hal-04154261v1
	Peptide filtering differently affects the performances of XIC-based quantifcation methods Melisande Blein-Nicolas , Isma Belouah , Thierry Balliau , Yves Gibon , Michel Zivy Journées Protéome Vert, Apr 2018, Paris, France Conference papers hal-03879922v1
	Dynamics of bud metabolites during dormancy in sweet cherry genotypes with contrasted chilling requirements Rémi Beauvieux , Bénédicte Wenden , Patricia Ballias , Hélène Christmann , Yves Gibon 8. International Cherry Symposium, Jun 2017, Yamagata, Japan. ⟨10.17660/ActaHortic.2019.1235.56⟩ Conference papers hal-02737043v1
	Integrative and predictive biology outside the plant: linking computational tools to fleshy fruit systems Cecile Cabasson , Sophie Colombie , Bertrand Beauvoit , Christine Nazaret , Camille Benard Colloque Biologie synthétique et systémique, BioSynSys, Jun 2016, Bordeaux, France Conference papers hal-02739719v1
	Integration of “omics” data provides tools for understanding effects of variable nitrogen (N) and sulphur (S) supply during wheat grain development Titouan Bonnot , Emmanuelle Bancel , David Alvarez , Mireille Dardevet , Julie Boudet COST FA1306 meeting, Feb 2016, Versailles, France Conference papers hal-02340464v1
	Flux balance modelling in developing tomato fruit: the respiration climacteric as an emergent property Sophie S. Colombie , Bertrand Beauvoit , Christine Nazaret , Camille Bénard , Cécile Cabasson 10. journées scientifiques du Réseau Francophone de Métabolomique et Fluxomique RFMF 2016, Réseau Francophone de Métabolomique et Fluxomique (RFMF). FRA., May 2016, Montpellier, France Conference papers hal-02740471v1
	Leaf marker metabolites for low nitrogen stress in maize Maria Urrutia Rosauro , Stéphane Bernillon , M. Maucourt , Catherine Deborde , Daniel Jacob Plant Biology Europe EPSO/FESPB 2016, Jun 2016, Prague, Czech Republic Conference papers hal-01605806v1
	Is failure of reproductive development under water or heat stress due to C shortage ? Bertrand Muller , Nathalie Luchaire , Vincent Oury , Francois Tardieu , Yves Gibon SEB Symposium, Jul 2016, Brighton, United Kingdom Conference papers hal-02740765v1
	Consequences of high temperatures and drought on peach fruit production strongly depends on their period of occurence Fatima Adra , Gilles Vercambre , Daniel Plénet , Benedicte Bakan , Agathe Noblet Climate-Smart Agriculture 2015 : Global Science Conference, Mar 2015, Montpellier, France Conference papers hal-01603456v1
	Using metabolomic approaches and modelling of central metabolic to study fleshy fruit quality Sophie S. Colombie , Bertrand Beauvoit , Dominique D. Rolin , Stéphane Bernillon , Camille Bénard 1. International Symposium on Metabolomics in Mexico, Jun 2015, Guadalajara, Mexico. 2 p Conference papers hal-02800371v1
	Investigating plant performance using metabolic phenotyping Yves Gibon COST FA 1306: The quest for tolerant varieties - Phenotyping at plant and cellular level, Jun 2015, IPK Gatersleben, Germany Conference papers hal-01603501v1
	Fruit systems biology Yves Gibon Tsukuba Global Science Week 2015, Sep 2015, Tsukuba, Japan Conference papers hal-01603502v1
	Role of plant carbon status in yield components responses to elevated temperatures in microvine Nathalie Luchaire , Markus Rienth , Charles Romieu , Laurent Torregrosa , Yves Gibon 19. Journées Internationales de Viticulture GiESCO, May 2015, Gruissan, France. 810 p Conference papers hal-01506406v1
	Cellular and subcellular metabolomics reveal changes during tomato leaf development Clémence de Jaham , Benjamin Thiombiano , Camille Bénard , A.P. Alonso , J.C. Cocuron 9. Journées scientifiques du RFMF, Réseau Francophone de Métabolomique et Fluxomique (RFMF). FRA., Jun 2015, Lille, France Conference papers hal-02740382v1
	Association mapping fo quantitative responses to Turnip Mosaic Virus (TuMV) infection trait loci in Arabidopsis thaliana through evaluation of biomass, viral accumulation, and metabolic profiles Anais Graveleau , Bernadette Rubio , Zofia Nehr , Patrick Cosson , Mélodie Caballero GDR Génétique Quantitative dans les Populations Naturelles, Oct 2015, Toulouse, France Conference papers hal-01601534v1
	Fruit systems biology Yves Gibon IPMB 2015 - 11. International Congress of Plant Molecular Biology, Oct 2015, Igauçu Cataratas, Brazil Conference papers hal-01603499v1
	Dynamique de métabolites en relation avec l’état de dormance des bougeons floraux chez le cerisier doux Rémi Beauvieux , Bénédicte B. Wenden , Yves Y. Gibon , Elisabeth Dirlewanger Colloque Francophone Phénologie, Nov 2015, Clermont-Ferrand, France Conference papers hal-02743152v1
	Genomic studies on a highly complex trait in Sweet Cherry: tolerance to rain-induced fruit José Quero-Garcia , José Antonio Campoy-Corbalan , Guillaume Lalanne-Tisne , Jacques Joly , Yves Y. Gibon Plant and Animal Genome XXIII, Jan 2015, San Diego, United States Conference papers hal-02742464v1
	Investigating drought resistance using metabolic phenotyping Yves Gibon DROPS – EUCARPIA Conference : Recent progress in drought tolerance from genetics to modelling, Jun 2015, Montpellier, France Conference papers hal-01603500v1
	Using developmental and diurnal compositional changes of tomato to study metabolism Camille Bénard , Stéphane Bernillon , Benoit Biais , Sonia Osorio-Algar , Mickael M. Maucourt 8. Journées Scientifiques du Réseau Français de Métabolomique et Fluxomique RFMF, May 2014, Lyon, France. 1 p Conference papers hal-02793195v1
	Genetic architecture of quantitative responses to Turnip Mosaic Virus (TuMV) infection trait loci in Arabidopsis thaliana through evaluation of biomass, viral accumulation, and metabolic profiles Anais Graveleau , Bernadette Rubio , Zofia Nehr , Patrick Cosson , Mélodie Caballero Réseau résistances durables, 2014, Lauret, France Conference papers hal-02798441v1
	La métabolomique : un outil de la génomique fonctionnelle au service de la biologie des systèmes Dominique D. Rolin , Bertrand Beauvoit , Stéphane Bernillon , Camille Bénard , Patricia Ballias 8e Congrès Jeunes Chercheurs de la SFBV, Société Française de Biologie Végétale (SFBV). FRA., Jun 2014, Tours, France. 1 p Conference papers hal-02801036v1
	Metabolic Phenotyping, in Quest of Serendipity Yves Y. Gibon Journée Scientifique BAP-INRA, Apr 2014, Pont Royal, France Conference papers hal-02792057v1
	Modelling fluxes and metabolic network analysis of developing tomato fruits Sophie S. Colombie , Bertrand Beauvoit , Christine Nazaret , Martine Dieuaide Noubhani , Jean-Pierre Mazat Bordeaux Computational Biology and Bioinformatics, Nov 2014, Bordeaux, France Conference papers hal-02796388v1
	Fruit quality in sweet cherry: from QTLs to candidate genes Elisabeth Dirlewanger , José Antonio Campoy-Corbalan , Loick Le Dantec , Jacques Joly , Lydie Fouilhaux 7. International Rosaceae Genomics Conference, Jun 2014, Seattle, United States Conference papers hal-02793254v1
	Fruity data, juicy concepts Yves Y. Gibon Institute's days at the MPIMP-Golm, Jun 2013, Potsdam, Germany Conference papers hal-02805469v1
	High or low fructose? Consequences for sugar metabolism in peach fruit Elsa Desnoues , Yves Y. Gibon , Valentina Baldazzi , Veronique Signoret , Michel M. Génard 8. ISHS International Peach Symposium, Jun 2013, Matera, Italy. 1 p Conference papers hal-02740591v1
	Diurnal compositional changes of tomato fruit and leaf Camille Benard , Stéphane Bernillon , Sonia Osorio-Algar , Mickael M. Maucourt , Benoit Biais Metabolomics 2013, Jul 2013, Glasgow, United Kingdom. 1 p Conference papers hal-02803658v1
	Réseaux métaboliques Yves Y. Gibon Colloque AllEnvi - "Modélisation multi-échelle des plantes", Nov 2013, Lyon, France Conference papers hal-02802439v1
	Combining systems biology, genome resequencing and MAGIC population to decipher the genetic variation of tomato fruit quality Laura Pascual , Jiaxin Xu , Nelly Desplat , Yves Y. Gibon , Annick Moing 10. Solanaceae conference (SOL 2013), Oct 2013, Beijing, China Conference papers hal-02750138v1
	Association mapping of quantitative responses to Turnip mosaic virus (TuMV) infection trait loci in Arabidopsis thaliana through evaluation of biomass, viral accumulation, and metabolic profiles Anais Graveleau , Patrick Cosson , Mélodie Caballero , Frederic Revers , Yves Y. Gibon 14. Rencontres de Virologie Végétale, Jan 2013, Aussois, France. p. 12 Conference papers hal-02811083v1
	Old school analytical biochemistry in the era of systems biology Yves Y. Gibon Accliphot, Oct 2013, Zurich, Switzerland Conference papers hal-02802824v1
	Impact of the tomato fruit temperature on its growth and composition Hélène Gautier , Nadia Bertin , Valentina Baldazzi , Béatrice Brunel , Jean-Claude L'Hôtel 2. Symposium on Horticulture in Europe, Jul 2012, Angers, France. 1 p Conference papers hal-02747573v1
	Metabolomics data integration in tomato plant-fruit systems biology Camille Bénard , Dominique D. Rolin , Stéphane Bernillon , Mickael M. Maucourt , Benoit Biais Metabolomics-2012, International Conference and Exhibition on Metabolomics & Systems Biology, Feb 2012, San Francisco, United States Conference papers hal-02803433v1
	Genetic diversity, inheritance and integration of multi-level omic data in tomato fruit Jiaxin Xu , Laura Pascual-Banuls , Nelly Desplat , Jean-Paul Bouchet , Yves Y. Gibon 20. Plant and Animal Genome, Jan 2012, San Diego, United States. pp.W643 Conference papers hal-02810053v1
	Ozone-induced detoxification processes in three populus genotypes: metabolomic and molecular approaches Jennifer Dumont , M. Keski-Saari , M. Keinanen , S. Kontunen Soppela , David Cohen Joint International Conference “Biological Reactions of Forests to Climate Change and Air Pollution”, International Union of Forest Research Organisations (IUFRO). AUT., May 2012, Kaunas, Lithuania Conference papers hal-02745486v1
	Compositional changes of tomato seeds during development and maturation Cécile Cabasson , Ousmane Harouna Kore , Catherine Deborde , Mickael M. Maucourt , Annick Moing 6. Journées Scientifiques du Réseau Français de Métabolomique et Fluxomique (RFMF), May 2012, Nantes, France. p. 60 Conference papers hal-02807332v1
	A multi-Ievel omic approach of tomato fruit quality Jiaxin Xu , Laura Pascual , Nelly Desplat , Mireille Faurobert , Yves Y. Gibon 2. Symposium on Horticulture in Europe, Jul 2012, Angers, France Conference papers hal-02748459v1
	Régulation de la synthèse des protéines de réserve du grain de blé en réponse à la disponibilité en azote et soufre Anne A. Plessis , Zhanwu Z. Dai , Nathalie N. Duchateau , Mireille M. Dardevet , Duyên D. Prodhomme Congrès Grains, Oct 2011, Nantes, France Conference papers hal-00964176v1
	Variation journalière de la composition métabolique de fruit de tomate en cours de maturation Camille Benard , Stéphane Bernillon , Mickael M. Maucourt , Benoit Biais , Sonia Osorio-Algar 5. Journées scientifiques du Réseau Français de Métabolomique et Fluxomique, Labo/service de l'auteur, Ville service., May 2011, Paris, France Conference papers hal-02749748v1
	Tools and applications in plant metabolomics at Bordeaux Metabolome Fluxome Facility (PMFB; http://www.bordeaux.inra.fr/umr619/NMR.htm) Catherine Deborde , Stéphane Bernillon , Mickael M. Maucourt , Cécile Cabasson , Benoit Biais 5. Journées scientifiques du Réseau Français de Métabolomique et Fluxomique, Labo/service de l'auteur, Ville service., May 2011, Paris, France Conference papers hal-02749839v1
	Integrated approaches for deciphering the mechanisms controlling fruit nutritional quality in tomato Christophe Rothan , Nicolas Viron , Louise Gilbert , Virginie V. Garcia , Johann J. Petit Colloque AI Fruit, Apr 2011, Angers, France Conference papers hal-02804064v1
	Fast and cheap metabolic phenotyping in plants using microplate technology Yves Y. Gibon 4. Journées scientifiques du Réseau Français de Métabolomique et Fluxomique, May 2010, Marseille, France Conference papers hal-02752517v1
	A role for carbon metabolism in plant growth response to soil water deficit? An integrated perspective Bertrand Muller , Irène Hummel , Florent Pantin , Ronan Sulpice , Mark Stitt SEB Main Meeting 2010, Jun 2010, Prague, Czech Republic Conference papers hal-02751275v1
	Plant metabolomics at Bordeaux Metabolome-Fluxome Facility. Tools and applications at PMFB Catherine Deborde , Stéphane Bernillon , Mickael M. Maucourt , Cécile Cabasson , Isabelle Quintana 4. Journées scientifiques du Réseau Français de Métabolomique et Fluxomique, May 2010, Marseille, France Conference papers hal-02756773v1
	Fast and cheap metabolic phenotyping for functional genomics Yves Y. Gibon Indo French Symposium, Jan 2010, Lucknow, India Conference papers hal-02752977v1
	Biochemical phenotyping of Vitis by 1H-NMR profiling and targeted enzymatic analysis Nathalie Ollat , Catherine Deborde , Christel Renaud , Mickael M. Maucourt , Stéphanie Doumouya Metabolomics 2010, Jun 2010, Amsterdam, Netherlands Conference papers hal-02753834v1
	C metabolism and plant growth under water deficit: chicken and egg Bertrand Muller , Irène Hummel , Florent Pantin , Ronan Sulpice , Maria Piques Salt & Water Stress in Plants : from molecules to crops, Gordon Research Conferences (GRC). USA., Jun 2010, Les Diablerets, Switzerland Conference papers hal-02756341v1
	Intra and interspecific biochemical phenotyping of Vitis Nathalie Ollat , Catherine Deborde , Christel Renaud , Mickael M. Maucourt , Stéphanie Doumouya 4. Journées scientifiques du Réseau Français de Métabolomique et Fluxomique, May 2010, Marseille, France Conference papers hal-02757382v1
	Applications and tools in plant metabolomics at Bordeaux Metabolome-Fluxome Facility Catherine Deborde , Stéphane Bernillon , Mickael M. Maucourt , Cécile Cabasson , Patricia Ballias Metabolomics 2010, Jun 2010, Amsterdam, Netherlands Conference papers hal-02757642v1
	NMR profiling and more for the characterization of melon genetic resources and melon fruit physiology Annick Moing , Asaph Aharoni , Benoit Biais

Yves Gibon

Publications

The rates of starch depletion and hydraulic failure both play a role in drought-induced seedling mortality

Genetic control of abiotic stress-related specialized metabolites in sunflower

Multi-regulated GDP-l-galactose phosphorylase calls the tune in ascorbate biosynthesis

Ecological and metabolic implications of the nurse effect of Maihueniopsis camachoi in the Atacama Desert

Deciphering molecular events behind Systemin-induced resistance to Botrytis cinerea in tomato plants

Different wheat loci are associated to heritable free asparagine content in grain grown under different water and nitrogen availability

Enzyme‐based kinetic modelling of ASC–GSH cycle during tomato fruit development reveals the importance of reducing power and ROS availability

Multi-omics quantitative data of tomato fruit unveils regulation modes of least variable metabolites

GABA shunt pathway is stimulated in response to early defoliation-induced carbohydrate limitation in Mandarin fruits

Blue light promotes ascorbate synthesis by deactivating the PAS/LOV photoreceptor that inhibits GDP- l -galactose phosphorylase

Détermination des volumes cellulaires et subcellulaires par analyse d’images de microscopie : Comment estimer la vitesse de croissance de cellules du fruit ?

Comparative constraint‐based modelling of fruit development across species highlights nitrogen metabolism in the growth‐defence trade‐off

Differences between tree stem CO 2 efflux and O 2 influx rates cannot be explained by internal CO 2 transport or storage in large beech trees

Advances in fruit development and ripening

The potential of integrative phenomics to harness underutilized crops for improving stress resilience

A low carbon balance triggers Microvine inflorescence abscission at high temperatures

Predictive metabolomics of multiple Atacama plant species unveils a core set of generic metabolites for extreme climate resilience

Comparative Analysis of Antioxidant Accumulation under Cold Acclimation, Deacclimation and Reacclimation in Winter Wheat

Protocole de marquage à l’azote 15N de fruits de tomate issus de plantes cultivées en condition standard

High-throughput plant phenotyping: a role for metabolomics?

From fruit growth to ripening in plantain: a careful balance between carbohydrate synthesis and breakdown

Impaired cell growth under ammonium stress explained by modeling the energy cost of vacuole expansion in tomato leaves

MetaPhenomics: quantifying the many ways plants respond to their abiotic environment, using light intensity as an example

The effect of cold acclimation, deacclimation and reacclimation on metabolite profiles and freezing tolerance in winter wheat

Plant sugar metabolism, transport and signalling in challenging environments

Integrated multi-omic analysis of fruit maturity identifies biomarkers with drastic abundance shifts spanning the harvest period in ‘Royal Gala’ apple

Grape ASR Regulates Glucose Transport, Metabolism and Signaling

The Evolution of Leaf Function during Development Is Reflected in Profound Changes in the Metabolic Composition of the Vacuole

The NAD Kinase Slr0400 Functions as a Growth Repressor in Synechocystis sp. PCC 6803

Maize metabolome and proteome responses to controlled cold stress partly mimic early‐sowing effects in the field and differ from those of Arabidopsis

Metabolic Profile Discriminates and Predicts Arabidopsis Susceptibility to Virus under Field Conditions

Mitochondrial metabolism supports resistance to IDH mutant inhibitors in acute myeloid leukemia

Overproduction of ascorbic acid impairs pollen fertility in tomato

Thioredoxin m overexpression in chloroplasts alters carbon and nitrogen partitioning in tobacco plants

Ammonium supply induces differential metabolic adaptive responses in tomato according to leaf phenological stage

Another Tale from the Harsh World: How Plants Adapt to Extreme Environments

Leaf metabolomic data of eight sunflower lines and their sixteen hybrids under water deficit

Grapevines under drought do not express esca leaf symptoms

Modelling predicts tomatoes can be bigger and sweeter if biophysical factors and transmembrane transports are fine‐tuned during fruit development

Regulation of carbon metabolism in two maize sister lines contrasted for chilling tolerance

Model-assisted comparison of sugar accumulation patterns in ten fleshy fruits highlights differences between herbaceous and woody species

Transcriptomic and proteomic data in developing tomato fruit

Making experimental data tables in the life sciences more FAIR: a pragmatic approach

Fruit setting rewires central metabolism via gibberellin cascades

Omics data reveal putative regulators of einkorn grain protein composition under sulfur deficiency

Adenine Nucleotide and Nicotinamide Adenine Dinucleotide Measurements in Plants

Biomass composition explains fruit relative growth rate and discriminates climacteric from non-climacteric species

Metabolomics to Exploit the Primed Immune System of Tomato Fruit.

Peptide filtering differently affects the performances of XIC-based quantification methods

Identification of the Arabidopsis calmodulin-dependent NAD+ kinase that sustains the elicitor-induced oxidative burst

Modeling Protein Destiny in Developing Fruit

Metabolomic characterization of sunflower leaf allows discriminating genotype groups or stress levels with a minimal set of metabolic markers

Fruit salad in the lab: comparing botanical species to help deciphering fruit primary metabolism

Regulation of Pyridine Nucleotide Metabolism During Tomato Fruit Development Through Transcript and Protein Profiling.

Get the Balance Right: ROS Homeostasis and Redox Signalling in Fruit

Central Metabolism Is Tuned to the Availability of Oxygen in Developing Melon Fruit

Omeprazole Treatment Enhances Nitrogen Use Efficiency Through Increased Nitrogen Uptake and Assimilation in Corn.

Wine yeast phenomics: A standardized fermentation method for assessing quantitative traits of Saccharomyces cerevisiae strains in enological conditions

Integrating proteomics and enzymatic profiling to decipher seed metabolism affected by temperature in seed dormancy and germination.

CORRECTION: Exploiting the Genetic Diversity of Maize Using a Combined Metabolomic, Enzyme Activity Profiling, and Metabolic Modelling Approach to Link Leaf Physiology to Kernel Yield.

Putting primary metabolism into perspective to obtain better fruits

Constraint-based modeling highlights cell energy, redox status and α-ketoglutarate availability as metabolic drivers for anthocyanin accumulation in grape cells under nitrogen limitation

Identification and functional study of a mild allele of SlDELLA gene conferring the potential for improved yield in tomato

Impacts of Paraburkholderia phytofirmans Strain PsJN on Tomato (Lycopersicon esculentum L.) Under High Temperature

Comparative metabolomics and glycolysis enzyme profiling of embryogenic and nonembryogenic grape cells

Metabotyping of 30 maize hybrids under early-sowing conditions reveals potential marker-metabolites for breeding

Differences in Blossom-end Rot Resistance in Tomato Cultivars is Associated with Total Ascorbate rather than Calcium Concentration in the Distal End Part of Fruits per se

Corrigendum to "Integrating proteomics and enzymatic profiling to decipher seed metabolism affected by temperature in seed dormancy and germination" [Plant Sci. 269 (2018) 118-125]

1H-NMR metabolomic profiling reveals a distinct metabolic recovery response in shoots and roots of temporarily drought-stressed sugar beets.

Dissection of the molecular bases of genotype x environment interactions: a study of phenotypic plasticity of Saccharomyces cerevisiae in grape juices

Exploiting the Genetic Diversity of Maize Using a Combined Metabolomic, Enzyme Activity Profiling, and Metabolic Modeling Approach to Link Leaf Physiology to Kernel Yield.

The role of potassium on maize leaf carbon exportation under drought condition

Microvine: A New Model to Study Grapevine Growth and Developmental Patterns and their Responses to Elevated Temperature

QTL Analyses in Multiple Populations Employed for the Fine Mapping and Identification of Candidate Genes at a Locus Affecting Sugar Accumulation in Melon (Cucumis melo L.).

Combined Alternaria dauci infection and water stresses impact carotenoid content of carrot leaves and roots

Bryophyte gas-exchange dynamics along varying hydration status reveal a significant carbonyl sulphide (COS) sink in the dark and COS source in the light

Measurement of Tricarboxylic Acid Cycle Enzyme Activities in Plants.

Correlation-Based Network Analysis of Metabolite and Enzyme Profiles Reveals a Role of Citrate Biosynthesis in Modulating N and C Metabolism in Zea mays.