Adrien Coulet
75
Documents
Publications
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Representation and comparison of chemotherapy protocols with ChemoKG and graph embeddingsSWAT4HCLS 2024 - 15th International Semantic Web Applications and Tools for Health Care and Life Sciences Conferenc, Feb 2024, Leiden (NL), Netherlands
Communication dans un congrès
hal-04455155v1
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Results of the Ontology Alignment Evaluation Initiative 202318th International Workshop on Ontology Matching (OM 2023), Nov 2023, Athens, Greece. pp.97--139
Communication dans un congrès
hal-04366893v1
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Matching Pharmacogenomic Knowledge: Particularities, Results, and Perspectives17th International Workshop on Ontology Matching : OM-2022, Oct 2022, Virtual, China
Communication dans un congrès
hal-03835712v1
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Portabilité des algorithmes de phénotypage: le cas de la polyarthrite rhumatoïde dans le dossier patient informatisé en françaisJournée d’étude sur la robustesse des systemes de TAL, ATALA, Nov 2022, Paris, France
Communication dans un congrès
hal-04295970v1
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Combiner plongements de graphes et clustering pour l'alignement de connaissances pharmacogénomiquesSanté & IA 2022 - Journée Santé et Intelligence Artificielle (Evènement affilié à PFIA 2022), Jun 2022, Saint-Etienne, France
Communication dans un congrès
hal-03754776v1
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Exploring Analogical Inference in HealthcareIARML@IJCAI-ECAI’2022: Workshop on the Interactions between Analogical Reasoning and Machine Learning, at IJCAI-ECAI’2022, Jul 2022, Vienna, Austria
Communication dans un congrès
hal-03955354v1
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An analogy based framework for patient-stay identification in healthcareATA@ICCBR 2022 - Workshop Analogies: from Theory to Applications, Sep 2022, Nancy, France
Communication dans un congrès
hal-03763772v1
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Using an ontological representation of chemotherapy toxicities for guiding information extraction and integration from EHRsMedinfo 2021 - 18th World Congress on Medical and Health Informatics, Oct 2021, Virtual conference, Australia
Communication dans un congrès
hal-03364585v1
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Expérimentations autour des architectures d'apprentissage par transfert pour l'extraction de relations biomédicalesEGC 2021 - 21ème édition de la conférence "Extraction et Gestion des Connaissances", Jan 2021, Montpellier / Virtuel, France
Communication dans un congrès
hal-03073601v1
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Tackling scalability issues in mining path patterns from knowledge graphs: a preliminary studyALGOS 2020 - 1st International Conference on Algebras, Graphs and Ordered Sets, Aug 2020, Nancy, France
Communication dans un congrès
hal-02913224v1
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Knowledge-Based Matching of $n$-ary TuplesICCS 2020 - 25th International Conference on Conceptual Structures, Sep 2020, Bolzano / Virtual, Italy. pp.48-56, ⟨10.1007/978-3-030-57855-8_4⟩
Communication dans un congrès
hal-02493067v1
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Creating Fair Models of Atherosclerotic Cardiovascular Disease RiskAIES '19 - Proceedings of the 2019 AAAI/ACM Conference on AI, Ethics, and Society, Jan 2019, Honolulu, United States. pp.271-278, ⟨10.1145/3306618.3314278⟩
Communication dans un congrès
hal-02388730v1
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Knowledge Reconciliation with Graph Convolutional Networks: Preliminary ResultsDL4KG2019 - Workshop on Deep Learning for Knowledge Graphs, Jun 2019, Portoroz, Slovenia
Communication dans un congrès
hal-02155546v1
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Combining Concept Annotation and Pattern Structures for Guiding Ontology MappingFCA4AI@IJCAI2018 - 6th International Workshop "What can FCA do for Artificial Intelligence?", Jul 2018, Stockholm, Sweden
Communication dans un congrès
hal-01858391v1
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Syntax-based Transfer Learning for the Task of Biomedical Relation ExtractionLOUHI 2018 - The Ninth International Workshop on Health Text Mining and Information Analysis, Oct 2018, Brussels, Belgium
Communication dans un congrès
hal-01869071v1
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Découverte d'associations entre Evénements Indésirables Médicamenteux par les structures de patrons et les ontologiesJournée I.A. et Santé, Jul 2018, Nancy, France
Communication dans un congrès
hal-01872312v1
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Cooperation of bio-ontologies for the classification of genetic intellectual disabilities : a diseasome approachProceedings of the 11th International Conference on Semantic Web Applications and Tools for Healthcare and Life Sciences (SWAT4HCLS 2018), Dec 2018, Antwerp, Belgium
Communication dans un congrès
hal-01925471v1
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Using formal concept analysis for checking the structure of an ontology in LOD: the example of DBpedia23rd International Symposium on Methodologies for Intelligent Systems, ISMIS 2017, Warsaw university of technology, Jun 2017, Warsaw, Poland. pp.674-683, ⟨10.1007/978-3-319-60438-1_66⟩
Communication dans un congrès
hal-01511909v1
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Tree-LSTM and Cross-Corpus Training for Extracting Biomedical Relationships from TextDLPM2017 Workshop - 2nd International Workshop on Deep Learning for Precision Medicine, Sep 2017, Skopje, Macedonia
Communication dans un congrès
hal-01592802v1
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PGxO: A very lite ontology to reconcile pharmacogenomic knowledge unitsMethods, tools & platforms for Personalized Medicine in the Big Data Era, Oct 2017, Palermo, Italy. ⟨10.7287/peerj.preprints.3140v1⟩
Communication dans un congrès
hal-01593184v2
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Extraction d'association d'EIM à partir de dossiers patients : expérimentation avec les structures de patrons et les ontologiesDeuxième Atelier sur l'Intelligence Artificielle et la Santé, Jun 2016, Montpellier, France
Communication dans un congrès
hal-01391172v1
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Discovering ADE associations from EHRs using pattern structures and ontologiesPhenotype Day, Bio-Ontologies SIG, ISMB, Jul 2016, Orlando, United States
Communication dans un congrès
hal-01369448v1
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Suggesting valid pharmacogenes by mining linked dataSemantic Web Applications and Tools for Life Sciences (SWAT4LS) 2015, Dec 2015, Cambridge, United Kingdom
Communication dans un congrès
hal-01239568v1
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Extracting Disease-Symptom Relationships by Learning Syntactic Patterns from Dependency GraphsBioNLP 15, Association for Computational Linguistics, Jul 2015, Beijing, China. pp.184
Communication dans un congrès
hal-01184655v1
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ILP for Mining Linked Open Data: a biomedical Case StudyThe 24th International Conference on Inductive Logic Programming (ILP 2014), Sep 2014, Nancy, France
Communication dans un congrès
hal-01095597v1
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Mining Linked Open Data: A Case Study with Genes Responsible for Intellectual DisabilityData Integration in the Life Sciences - 10th International Conference, DILS 2014, Jul 2014, Lisbon, Portugal. pp.16 - 31, ⟨10.1007/978-3-319-08590-6_2⟩
Communication dans un congrès
hal-01095591v1
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Learning Subgraph Patterns from text for Extracting Disease–Symptom Relationships1st International Workshop on Interactions between Data Mining and Natural Language Processing, Sep 2014, Nancy, France
Communication dans un congrès
hal-01095595v1
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Using pattern structures for analyzing ontology-based annotations of biomedical dataSeptièmes Journées d'Intelligence Artificielle Fondamentale, Jun 2013, Aix-en-Provence, France. pp.97--106
Communication dans un congrès
hal-00922392v1
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Using Pattern Structures for Analyzing Ontology-Based Annotations of Biomedical DataInternational Conference on Formal Concept Analysis, May 2013, Dresden, Germany
Communication dans un congrès
hal-00880643v1
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Lattice Based Data Access (LBDA): An Approach for Organizing and Accessing Linked Open Data in BiologyDMoLD'13 - Data Mining on Linked Data Workshop (ECML/PKDD, 2013), Sep 2013, Prague, Czech Republic
Communication dans un congrès
hal-00903450v1
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Formal Concept Analysis Applied to Transcriptomic DataThe Ninth International Conference on Concept Lattices and Their Applications - CLA 2012, Oct 2012, Fuengirola (Málaga), Spain
Communication dans un congrès
hal-00761003v1
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Formal Concept Analysis Applied to Transcriptomic DataWhat can FCA do for Artificial Intelligence (FCA4AI) (ECAI 2012), Aug 2012, Montpellier, France
Communication dans un congrès
hal-00760993v1
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Indexation et intégration de ressources textuelles à l'aide d'ontologies : application au domaine biomédical21èmes Journées Francophones d'Ingénierie des Connaissances (IC 2010), Jun 2010, Nimes, France. pp.271-282
Communication dans un congrès
hal-00488419v1
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NCBO Resource Index: Ontology-Based Search and Mining of Biomedical Resources9th International Semantic Web Conference (ISWC 2010), Semantic Web Challenge winner award, Nov 2010, Shangai, China. pp.8
Communication dans un congrès
hal-00557982v1
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Ontology Refinement through Role Assertion Analysis: Example in Pharmacogenomics21st International Workshop on Description Logics - DL2008, May 2008, Dresden, Germany
Communication dans un congrès
inria-00338677v1
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Ontology-guided Data Preparation for Discovering Genotype-Phenotype RelationshipsNetwork Tools and Applications in Biology: A Semantic Web for Bioinformatics - NETTAB 2007, Jun 2007, Pisa, Italy
Communication dans un congrès
inria-00186988v1
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Suggested Ontology for Pharmacogenomics (SO-Pharm): Modular Construction and Preliminary TestingProceedings of International Workshop on Knowledge Systems in Bioinformatics - KSinBIT'06, Oct 2006, Montpellier, France
Communication dans un congrès
inria-00089824v1
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SNP-Ontology for semantic integration of genomic variation data14th Annual International Conference on Intelligent Systems for Molecular Biology - ISMB'06, Aug 2006, Fortaleza/Brésil
Communication dans un congrès
inria-00067863v2
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SNP-Converter: an Ontology-Based solution to Reconcile Heterogeneous SNP Descriptions for Pharmacogenomic Studies3rd International Workshop on Data Integration in the Life Sciences 2006 - DILS'06, Jul 2006, European Bioinformatics Institute (EBI), Hinxton/UK
Communication dans un congrès
inria-00080050v1
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Ontology-driven Data Integration for Pharmacogenomics: Application to Genome VariationsJournées Ouvertes : Biologie, Informatique et Mathématiques - JOBIM'06, Centre de Bioinformatique de Bordeaux (CBiB), Jul 2006, Bordeaux/France
Communication dans un congrès
inria-00080064v1
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Extraction de données pharmacogénomiques à partir d'études cliniques : problématiqueDeuxième atelier sur la "Fouille de données complexes dans un processus d'extraction des connaissances", Jan 2005, Paris/France
Communication dans un congrès
inria-00080156v1
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PGxCorpus and PGxLOD: two shared resources for knowledge management in pharmacogenomicsJOBIM 2022 - Journées Ouvertes en Biologie, Informatique et Mathématiques, Jul 2022, Rennes, France. , JOBIM 2022 Proceedings - Posters, Démos
Poster de conférence
hal-03754888v1
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Discovering Subsumption Axioms with Concept AnnotationBDA 2017 - 33ème Conférence sur la Gestion de Données — Principes, Technologies et Applications, Nov 2017, Nancy, France. Gestion de Données — Principes, Technologies et Applications (BDA 2017)
Poster de conférence
hal-01671454v2
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Mining Linked Open Data: a Case Study with Genes Responsible for Intellectual DisabilityPoster de conférence hal-01092800v1 |
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Ontology-based Web Services for Data Annotation and Integration18th International Conference on Intelligent Systems for Molecular Biology (ISMB 2010), Technology track, Jul 2010, Boston, United States. , TT33, 2010
Poster de conférence
lirmm-01605892v1
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Ontology Web Services for Semantic ApplicationsPoster de conférence hal-04297858v1 |
Ontology-based knowledge discovery in pharmacogenomics.Hamid R. Arabnia and Quoc-Nam Tran. Software Tools and Algorithms for Biological Systems, 696, Springer, pp.357-66, 2011, Advances in Experimental Medicine and Biology, 978-1-4419-7046-6. ⟨10.1007/978-1-4419-7046-6_36⟩
Chapitre d'ouvrage
inria-00585072v1
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Supporting Diagnosis With Next-Generation Artificial Intelligence2022, ⟨10.1001/jama.2022.2303⟩
Autre publication scientifique
hal-03700431v1
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Providing Molecular Characterization for Unexplained Adverse Drug Reactions2019
Pré-publication, Document de travail
hal-02196134v1
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Data-Interlinking: the Seed of Knowledge Reconciliation in Pharmacogenomics2018
Pré-publication, Document de travail
hal-01955262v1
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Construction et utilisation d'une base de connaissances pharmacogénomique pour l'intégration de données et la découverte de connaissancesInterface homme-machine [cs.HC]. Université Henri Poincaré - Nancy 1, 2008. Français. ⟨NNT : 2008NAN10047⟩
Thèse
tel-01748450v2
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Mises en correspondances de données, textes et connaissances pour la découverte de connaissances biomédicalesBase de données [cs.DB]. Université de Lorraine, 2019
HDR
tel-02429926v2
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