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Concomitant investigation of crustacean amphipods lipidome and metabolome during the molting cycle by Zeno SWATH data-independent acquisition coupled with electron activated dissociation and machine learning
Thomas Alexandre Brunet
,
Yohann Clément
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Valentina Calabrese
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Jérôme Lemoine
,
Olivier Geffard
et al.
Article dans une revue
hal-04535105
v1
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ToF-SIMS imaging shows specific lipophilic vitamin alterations in chronic reprotoxicity caused by the emerging contaminant Pravastatin in Gammarus fossarum.
Tingting Fu
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Valentina Calabrese
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Anabelle Espeyte
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Sarah Bancel
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Hervé Quéau
et al.
Article dans une revue
hal-04565127
v1
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Editorial trend: adverse outcome pathway (AOP) and computational strategy — towards new perspectives in ecotoxicology
Damien Baudiffier
,
Karine Audouze
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Olivier Armant
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Sandrine Frelon
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Sandrine Charles
et al.
Article dans une revue
hal-04296774
v1
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Electron-activated dissociation (EAD) for the complementary annotation of metabolites and lipids through data-dependent acquisition analysis and feature-based molecular networking, applied to the sentinel amphipod Gammarus fossarum
Valentina Calabrese
,
Thomas Alexandre Brunet
,
Davide Degli-Esposti
,
Arnaud Chaumot
,
Olivier Geffard
et al.
Article dans une revue
hal-04507595
v1
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Proteogenomic reconstruction of organ-specific metabolic networks in an environmental sentinel species, the amphipod Gammarus fossarum
Natacha Koenig
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Patrice Baa-Puyoulet
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Amélie Lafont
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Isis Lorenzo-Colina
,
Vincent Navratil
et al.
Article dans une revue
hal-04704294
v1
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Identification and organ-specific patterns of expression of two metallothioneins in the sentinel species Gammarus fossarum
Davide Degli Esposti
,
Auréline Lalouette
,
Karen Gaget
,
Louveline Lepeule
,
Zineb Chaabi
et al.
Article dans une revue
hal-04704318
v1
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Reproductive Capacity, but not Food Consumption, is Reduced by Continuous Exposure to Typical Genotoxic Stressor γ-Rays in the sentinel species Gammarus fossarum
Sandrine Frelon
,
Rémi Recoura-Massaquant
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Nicolas Dubourg
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Laura Garnero
,
Jean-Marc Bonzom
et al.
Article dans une revue
hal-04867566
v1
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Challenges and perspectives in MS-based omics approaches for ecotoxicology studies: An insight on Gammarids sentinel amphipods
Valentina Calabrese
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Arnaud Salvador
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Yohann Clément
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Thomas Alexandre Brunet
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Anabelle Espeyte
et al.
Article dans une revue
hal-03986050
v1
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Dynamic Multiple Reaction Monitoring of amphipod Gammarus fossarum caeca expands molecular information for understanding the impact of contaminants
Maxime Leprêtre
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Arnaud Chaumot
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Rayan Aboud
,
Nicolas Delorme
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Anabelle Espeyte
et al.
Article dans une revue
hal-04358369
v1
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Acclimation and transgenerational plasticity support increased cadmium tolerance in Gammarus populations exposed to natural metal contamination in headwater streams
Auréline Lalouette
,
Davide Degli Esposti
,
Laura Garnero
,
Maxime Allibert
,
Lysiane Dherret
et al.
Article dans une revue
hal-04371960
v1
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Organ-oriented proteogenomics functional atlas of three aquatic invertebrate sentinel species
Maxime Leprêtre
,
Davide Degli Esposti
,
Kevin Sugier
,
Anabelle Espeyte
,
Jean-Charles Gaillard
et al.
Article dans une revue
(data paper)
hal-04372093
v1
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Development of a multi-omics extraction method for ecotoxicology: investigation of the reproductive cycle of Gammarus fossarum
Julien Faugere
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Thomas Alexandre Brunet
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Yohann Clément
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Anabelle Espeyte
,
Olivier Geffard
et al.
Article dans une revue
hal-03773623
v1
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From Extrapolation to Precision Chemical Hazard Assessment: The Ecdysone Receptor Case Study
Raquel Ruivo
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João Sousa
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Teresa Neuparth
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Olivier Geffard
,
Arnaud Chaumot
et al.
Article dans une revue
hal-03788309
v1
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Multiple reaction monitoring mass spectrometry for the discovery of environmentally modulated proteins in an aquatic invertebrate sentinel species, Gammarus fossarum
Maxime Leprêtre
,
Olivier Geffard
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Anabelle Espeyte
,
Julien Faugere
,
Sophie Ayciriex
et al.
Article dans une revue
hal-04045037
v1
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Determination of biomarkers threshold values and illustration of their use for the diagnostic in large-scale freshwater biomonitoring surveys
Maxime Leprêtre
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Alain Geffard
,
Mélissa Palos Ladeiro
,
Odile Dedourge-Geffard
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Elise David
et al.
Article dans une revue
hal-04047998
v1
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Subcellular Distribution of Dietary Methyl-Mercury in Gammarus fossarum and Its Impact on the Amphipod Proteome
Claudia Cosio
,
Davide Degli-Esposti
,
Christine Almunia
,
Véronique Gaillet
,
Hervé Sartelet
et al.
Article dans une revue
hal-03376460
v1
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Des bioessais écotoxicologiques in situ pour évaluer les impacts biologiques de la contamination chimique des cours d'eau nationaux : l'expérience du gammare
Arnaud Chaumot
,
Olivier Perceval
,
Rémi Recoura-Massaquant
,
Davide Degli Esposti
,
Olivier Geffard
Article dans une revue
hal-03601759
v1
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Shotgun lipidomics and mass spectrometry imaging unveil diversity and dynamics in Gammarus fossarum lipid composition
Tingting Fu
,
Oskar Knittelfelder
,
Yohann Clément
,
Eric Testet
,
Nicolas Elie
et al.
Article dans une revue
hal-03134038
v1
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Co-expression network analysis identifies novel molecular pathways associated with cadmium and pyriproxyfen testicular toxicity in Gammarus fossarum
Natacha Koenig
,
Christine Almunia
,
Aurore Bonnal-Conduzorgues
,
Jean Armengaud
,
Arnaud Chaumot
et al.
Article dans une revue
hal-03487859
v1
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In situ isobaric lipid mapping by MALDI-ion mobility separation-mass spectrometry imaging
Tingting Fu
,
Janina Oetjen
,
Manuel Chapelle
,
Alexandre Verdu
,
Matthias Szesny
et al.
Article dans une revue
hal-03113280
v1
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A “Population Dynamics” Perspective on the Delayed Life-History Effects of Environmental Contaminations: An Illustration with a Preliminary Study of Cadmium Transgenerational Effects over Three Generations in the Crustacean Gammarus
Pauline Cribiu
,
Alain Devaux
,
Laura Garnero
,
Khedidja Abbaci
,
Thérèse Bastide
et al.
Article dans une revue
hal-02921628
v1
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Proteogenomics‐Guided Evaluation of RNA‐Seq Assembly and Protein Database Construction for Emergent Model Organisms
Yannick Cogne
,
Duarte Gouveia
,
Arnaud Chaumot
,
Davide Degli Esposti
,
Olivier Geffard
et al.
Article dans une revue
hal-02922078
v1
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High-multiplexed monitoring of protein biomarkers in the sentinel Gammarus fossarum by targeted scout-MRM assay, a new vision for ecotoxicoproteomics
Julien Faugère
,
Duarte Gouveia
,
Sophie Ayciriex
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Arnaud Chaumot
,
Christine Almunia
et al.
Article dans une revue
hal-02903090
v1
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Combining proteogenomics and metaproteomics for deep taxonomic and functional characterization of microbiomes from a non-sequenced host
Duarte Gouveia
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Olivier Pible
,
Karen Culotta
,
Virginie Jouffret
,
Olivier Geffard
et al.
Article dans une revue
hal-02922047
v1
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De novo transcriptomes of 14 gammarid individuals for proteogenomic analysis of seven taxonomic groups
Yannick Cogne
,
Davide Degli Esposti
,
O. Pible
,
D. Gouveia
,
Adeline François
et al.
Article dans une revue
(data paper)
hal-02610005
v1
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Recommandations d'un collectif franco-suisse d'experts pour une meilleure évaluation de la qualité écotoxicologique des sédiments par l'étude des communautés benthiques
Stéphane Pesce
,
J.D. Ferrari
,
C. Bonnineau
,
C. Casado
,
L. Apotheloz Perret Gentil
et al.
Article dans une revue
hal-02609267
v1
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Comparative proteomics in the wild: Accounting for intrapopulation variability improves describing proteome response in a Gammarus pulex field population exposed to cadmium
Yannick Cogne
,
Christine Almunia
,
Duarte Gouveia
,
Olivier Pible
,
Adeline François
et al.
Article dans une revue
hal-02922064
v1
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In vitro transformation of primary human hepatocytes: Epigenetic changes and stemness properties
Floriane Pez
,
Patricia Gifu
,
Davide Degli-Esposti
,
Nadim Fares
,
Anaïs Lopez
et al.
Article dans une revue
hal-03488431
v1
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The methylome of the celiac intestinal epithelium harbours genotype-independent alterations in the HLA region
Nora Fernandez-Jimenez
,
Koldo Garcia-Etxebarria
,
Leticia Plaza-Izurieta
,
Irati Romero-Garmendia
,
Amaia Jauregi-Miguel
et al.
Article dans une revue
hal-02983598
v1
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Ecotoxicoproteomics: A decade of progress in our understanding of anthropogenic impact on the environment
Duarte Gouveia
,
Christine Almunia
,
Yannick Cogne
,
Olivier Pible
,
Davide Degli Esposti
et al.
Article dans une revue
hal-02109172
v1
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Co-expression network analysis identifies gonad- and embryo- associated protein modules in the sentinel species Gammarus fossarum
Davide Degli Esposti
,
Christine Almunia
,
Marc-Antoine Guery
,
Natacha Koenig
,
J. Armengaud
et al.
Article dans une revue
hal-02622270
v1
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Shotgun proteomics datasets acquired on Gammarus pulex animals sampled from the wild
D. Gouveia
,
Yannick Cogne
,
J.C. Gaillard
,
C. Almunia
,
O. Pible
et al.
Article dans une revue
(data paper)
hal-02610033
v1
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Digging deeper into the pyriproxyfen-response of the amphipod Gammarus fossarum with a next-generation ultra-high-field Orbitrap analyser: new perspectives for environmental toxicoproteomics
J. Trapp
,
D. Gouveia
,
C. Almunia
,
O. Pible
,
Davide Degli Esposti
et al.
Article dans une revue
hal-02074284
v1
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Identification, expression, and endocrine-disruption of three ecdysone-responsive genes in the sentinel species Gammarus fossarum
D. Gouveia
,
F. Bonneton
,
C. Almunia
,
J. Armengaud
,
H. Queau
et al.
Article dans une revue
hal-02073105
v1
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Glycogen synthase kinase 3-mediated voltage-dependent anion channel phosphorylation controls outer mitochondrial membrane permeability during lipid accumulation.
Cecile Martel
,
Maya Allouche
,
Davide Degli Esposti
,
Elena Fanelli
,
Céline Boursier
et al.
Article dans une revue
hal-00734262
v1
|
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First experimental evidence of peritoneal and pleural mesotheliomas induced by fluoro-edenite fibres present in Etnean volcanic material from Biancavilla (Sicily, Italy)
Morando Soffritti
,
Franco Minardi
,
Luciano Bua
,
Davide Degli Esposti
,
Fiorella Belpoggi
European Journal of Oncology, 2004
Article dans une revue
hal-04359150
v1
|