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30

Emeline Roux


Professional experience

Since 2021: University Rennes1, associate professor
Teaching biochemistry at the Life and Environmental Sciences Training and Research Unit (UFR SVE), co-director of the master Nutrition and Food Science (NSA);
Research at the Nutrition Metabolism and Cancer Institute (NuMeCan) in collaboration with IRISA/Inria Rennes, Study of the intestinal microbiota by MinION sequence analysis and metabolic network reconstruction.
 
2018-2021: IRISA/Inria Rennes, researcher
Identification of bacterial strains with MinION sequences.
 
2005-2018: University of Lorraine, Nancy, associate professor
Teaching biochemistry and molecular biology at the Institute of Technology (IUT) biological engineering;
Research at the research unit Animal and Functionality of Animal Products (UR AFPA), proteolytic system of lactic acid bacteria & bioactive peptides.
 
2004-2005: Kronenbourg Brewery, Strasbourg, researcher
 
2003-2004: University of Paris XII, Créteil, teacher
 
 
Education
 
2003: PhD in food biochemistry, National Agronomy Institute Paris-Grignon (AgroParisTech)
 
2000: Engineer in agricultural and food industries, Massy (AgroParisTech)

 


Journal articles20 documents

  • Emeline Roux, Aurélie Nicolas, Florence Valence, Grégoire Siekaniec, Victoria Chuat, et al.. The genomic basis of the Streptococcus thermophilus health-promoting properties. BMC Genomics, 2022, 23, pp.1-23. ⟨10.1186/s12864-022-08459-y⟩. ⟨hal-03612308⟩
  • Ahoefa Ablavi Awussi, Emeline Roux, Catherine Humeau, Zeeshan Hafeez, Bernard Maigret, et al.. Role of the Sortase A in the Release of Cell-Wall Proteinase PrtS in the Growth Medium of Streptococcus thermophilus 4F44. Microorganisms, MDPI, 2021, 9 (11), pp.2380. ⟨10.3390/microorganisms9112380⟩. ⟨hal-03537548⟩
  • Grégoire Siekaniec, Emeline Roux, Téo Lemane, Eric Guédon, Jacques Nicolas. Identification of isolated or mixed strains from long reads: a challenge met on Streptococcus thermophilus using a MinION sequencer. Microbial Genomics, Society for General Microbiology, 2021, 7 (11), pp.1-14. ⟨10.1099/mgen.0.000654⟩. ⟨hal-03444296⟩
  • Ophélie Uriot, Mounira Kebouchi, Emilie Lorson, Wessam Galia, Sylvain Denis, et al.. Identification of Streptococcus thermophilus Genes Specifically Expressed under Simulated Human Digestive Conditions Using R-IVET Technology. Microorganisms, MDPI, 2021, 9 (6), pp.1-26. ⟨10.3390/microorganisms9061113⟩. ⟨hal-03269961⟩
  • Marie Devaere, Sarrah Boukthir, Séverine Moullec, Emeline Roux, Dominique Lavenier, et al.. Complete Genome Sequences of Two Strains of Streptococcus pyogenes Belonging to an Emergent Clade of the Genotype emm89 in Brittany, France. Microbiology Resource Announcements, American Society for Microbiology, 2020, 9 (11), pp.e00129-20. ⟨10.1128/MRA.00129-20⟩. ⟨hal-02532959⟩
  • Tedj El Moulouk Khaldi, Mounira Kebouchi, Claire Soligot, Mohamed Amine Gomri, Karima Kharroub, et al.. Streptococcus macedonicus strains isolated from traditional fermented milks: resistance to gastrointestinal environment and adhesion ability. Applied Microbiology and Biotechnology, Springer Verlag, 2019, 103 (6), pp.2759-2771. ⟨10.1007/s00253-019-09651-z⟩. ⟨hal-02111693⟩
  • N. Jameh, Wessam Galia, Ahoefa Ablavi Awussi, Emeline Roux, Magali Genay, et al.. Characterization of a new peptide transport system in Streptococcus thermophilus. Food Research International, Elsevier, 2016, 86, pp.34-45. ⟨10.1016/j.foodres.2016.04.039⟩. ⟨hal-01533905⟩
  • Mounira Kebouchi, Wessam Galia, Magali Genay, Claire Soligot, Xavier Lecomte, et al.. Implication of sortase-dependent proteins of [i]Streptococcus thermophilus[/i] in adhesion to human intestinal epithelial cell lines and bile salt tolerance. Applied Microbiology and Biotechnology, Springer Verlag, 2016, 100 (8), pp.3667-79. ⟨10.1007/s00253-016-7322-1⟩. ⟨hal-01329214⟩
  • Maira Junjua, Noura Kechaou, Florian Chain, Ahoefa Ablavi Awussi, Yvonne Roussel, et al.. A large scale in vitro screening of Streptococcus thermophilus strains revealed strains with a high anti-inflammatory potential. LWT - Food Science and Technology, Elsevier, 2016, 70, pp.78-87. ⟨10.1016/j.lwt.2016.02.006⟩. ⟨hal-01329215⟩
  • Zeeshan Hafeez, Céline Cakir-Kiefer, Emeline Roux, Clarisse. Perrin, Laurent Mido, et al.. Strategies of producing bioactive peptides from milk proteins to functionalize fermented milk products. Food Research International, Elsevier, 2014, 63 (A, SI), pp.71-80. ⟨10.1016/j.foodres.2014.06.002⟩. ⟨hal-01562175⟩
  • Oun Ki Chang, Emeline Roux, Ahoefa Ablavi Awussi, Laurent Miclo, Julien Jardin, et al.. Use of a free form of the Streptococcus thermophilus cell envelope protease PrtS as a tool to produce bioactive peptides. International Dairy Journal, Elsevier, 2014, 38, pp.104-115. ⟨10.1016/j.idairyj.2014.01.008⟩. ⟨hal-01209572⟩
  • Oun Ki Chang, Clarisse Perrin, Wessam Galia, Franck Saulnier, Laurent Miclo, et al.. Release of the cell-envelope protease PrtS in the growth medium of Streptococcus thermophilus 4F44. International Dairy Journal, Elsevier, 2012, 23 (2), pp.91-98. ⟨10.1016/j.idairyj.2011.10.014⟩. ⟨hal-02644429⟩
  • Laurent Miclo, Emeline Roux, Magali Genay, Emilie Brusseaux, Chantal Poirson, et al.. Variability of Hydrolysis of beta- alpha(s1)-, and alpha(s2)-Caseins by 10 Strains of Streptococcus thermophilus and Resulting Bioactive Peptides. Journal of Agricultural and Food Chemistry, American Chemical Society, 2012, 60 (2), pp.554-565. ⟨10.1021/jf202176d⟩. ⟨hal-02650135⟩
  • Katerina Mlickova, Emeline Roux, Karin Athenstaedt, Sabine d'Andrea, Günther Daum, et al.. Lipid accumulation, lipid body formation, and acyl coenzyme A oxidases of the yeast Yarrowia lipolytica. Applied and Environmental Microbiology, American Society for Microbiology, 2004, 70 (7), pp.3918-3924. ⟨10.1128/AEM.70.7.3918-3924.2004⟩. ⟨hal-02682134⟩
  • Emeline Roux, Stéphanie S. Baumberger, Monique Axelos M.A.V., Thierry T. Chardot. Oleosins of Arabidopsis thaliana: Expression in Escherichia coli, purification, and functional properties. Journal of Agricultural and Food Chemistry, American Chemical Society, 2004, 52 (16), pp.5245-5249. ⟨10.1021/jf0355046⟩. ⟨hal-02678353⟩
  • Pacale Jolivet, E. Roux, Sabine d'Andrea, Marlène Davanture, Luc Négroni, et al.. Protein composition of oil bodies in Arabidopsis thaliana ecotype WS. Plant Physiology and Biochemistry, Elsevier, 2004, 42 (6), pp.501-509. ⟨10.1016/j.plaphy.204.04.006⟩. ⟨hal-02680055⟩
  • Emeline Roux, Catherine Billaud, Christelle Maraschin, Sophie Brun-Mérimee, Jacques Nicolas. Inhibitory effect of unheated and heated d-glucose, d-fructose and l-cysteine solutions and Maillard reaction product model systems on polyphenoloxidase from apple. II. Kinetic study and mechanism of inhibition. Food Chemistry, Elsevier, 2003, 81 (1), pp.51-60. ⟨10.1016/S0308-8146(02)00377-1⟩. ⟨hal-02990196⟩
  • E. Roux, Michel Canonge, Isabelle Bouchez-Mahiout, Michel Laurière, Thierry T. Chardot. Allergènes alimentaires. Les oléosines. Alim'Inter, 2003, 8 (2), 2 p. ⟨hal-02676402⟩
  • Catherine Billaud, Emeline Roux, Sophie Brun-Mérimee, Christelle Maraschin, Jacques Nicolas. Inhibitory effect of unheated and heated d-glucose, d-fructose and l-cysteine solutions and Maillard reaction product model systems on polyphenoloxidase from apple. I. Enzymatic browning and enzyme activity inhibition using spectrophotometric and polarographic methods. Food Chemistry, Elsevier, 2003, 81 (1), pp.35-50. ⟨10.1016/S0308-8146(02)00376-X⟩. ⟨hal-02990313⟩
  • E. Roux, Stéphanie S. Baumberger, Thierry T. Chardot. Behavior of oleosins at oil/water or air/water interfaces. Chemistry and Physics of Lipids, Elsevier, 2002, 118 (1-2), pp.62. ⟨hal-02671341⟩

Conference papers1 document

  • Zeeshan Hafeez, Céline Cakir-Kiefer, Emeline Roux, Clarisse Perrin, Laurent Mido, et al.. Strategies of producing bioactive peptides from milk proteins to functionalize fermented milk products. 16e Congrès mondial de l'Internationale-Union-de-Food-Science et Technologie (IUFoST), Aug 2012, Foz do Iguaçu, Brazil. pp.10, ⟨10.1016/j.foodres.2014.06.002⟩. ⟨hal-02744261⟩

Conference poster8 documents

  • Gouenou Coatrieux, Chloé Berton, Elsa Dupraz, Belaid Hamoum, Thomas Derrien, et al.. Storing the declaration of human rights on one data DNA molecule. CominLabs day 2022, Oct 2022, Rennes, France. pp.1-1. ⟨hal-03817852⟩
  • Grégoire Siekaniec, Rania Ouazahrou, Gaëlle Boudry, Eric Guédon, Emeline Roux, et al.. Identification of bacterial strains using ORI (Oxford nanopore Reads Identification). Microbes 2021 - Société Française de Microbiologie, Sep 2021, Nantes, France. ⟨hal-03374572⟩
  • Grégoire Siekaniec, Emeline Roux, Eric Guédon, Jacques Nicolas. Bacterial strains identification using Oxford Nanopore sequencing. JOBIM2020, Jun 2020, Montpellier, France. ⟨hal-03121440⟩
  • Laura Conde-Canencia, Belaid Hamoum, Dominique Lavenier, Emeline Roux. Error Correction Schemes for DNA Storage with Nanopore Sequencing. JOBIM 2019 - Journées Ouvertes Biologie, Informatique et Mathématiques, Jul 2019, Nantes, France. ⟨hal-02400744⟩
  • Dominique Lavenier, Emeline Roux, Laura Conde-Canencia, Belaid Hamoum. Advanced Coding Schemes for DNA-Based Data Storage Using Nanopore Sequencing Technologies. Journées CominLabs 2019, Nov 2019, Rennes, France. 2019. ⟨hal-02400656⟩
  • E. Roux, Stéphanie S. Baumberger, Monique Axelos M.A.V., . Le Groupe d'Etude Et de Recherche Sur Les Lipides Et Lipoprotéines. Interactions à une interface des oléosines avec des phospholipides et des triglycérides. 1. Congrès lipidomique. Diversité moléculaire et physiopathologies. Membranes, signalisation, nutrition, biotechnologies, cancer, athérosclérose, diabète et obésité, Sep 2003, Paris, France. 1 p., 2003. ⟨hal-02825005⟩
  • K. Mlickova, E. Roux, K. Athenstadt, Sabine d'Andrea, G. Daum, et al.. Dégradation des lipides et obésité chez la levure Yarrowia lipolytica. 1. Congrès de lipidomique. Diversité moléculaire et physiologies. Membranes, signalisation, nutrition, biotechnologies, cancer, athérosclérose, diabète et obésité, Sep 2003, Paris, France. 1 p., 2003. ⟨hal-02833561⟩
  • E. Roux, V. Arondel, Thierry T. Chardot. Expression d'oléosines d'Arabidopsis thaliana par Escherichia coli. Colloque SFPV Lipides des plantes et oxylipines, Jul 2001, Strasbourg, France. 1 p., 2001. ⟨hal-02831254⟩

Theses1 document

  • Emeline Roux. Les oléosines, de nouveaux émulsifiants d'origine végétale. Comparaison des globules lipidiques extraits de végétaux (A. thaliana) et de levures (Y. lipolytica). Biologie végétale. Institut national agronomique paris-grignon - INA P-G, 2003. Français. ⟨tel-00007548⟩