FJ

Fred Jean

Fred JEAN - Professeur en écologie marine. Mes recherches
69
Documents
Affiliation actuelle
  • Laboratoire des Sciences de l'Environnement Marin (LEMAR) (LEMAR)
Contact

Présentation

Professeur en écologie marine. Écologie et biophysique des systèmes marins, bioénergétique et écophysiologie des invertébrés benthiques, principalement des mollusques.


Compétences

Expérimentations en écophysiologie

Publications

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Publications

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Effect of starvation on physiological and survival traits of Mimachlamys varia (Linneaus, 1758)

Laure Régnier-Brisson , Aline Blanchet-Aurigny , Philippe Cugier , Florian Breton , Jean-Dominique Gaffet et al.
Journal of Sea Research (JSR), 2024, 198, pp.102467. ⟨10.1016/j.seares.2023.102467⟩
Article dans une revue hal-04516124 v1

Trade-off between growth and reproduction in Argopecten purpuratus (L.) scallops exposed to medium-term hypoxia and acidification

Rosa Cueto-Vega , Jonathan Flye-Sainte-Marie , José Luis García-Corona , Fernando Palacios , Fred Jean et al.
Aquaculture, 2024, 586, pp.740713. ⟨10.1016/j.aquaculture.2024.740713⟩
Article dans une revue hal-04559441 v1
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Inter-species comparison of life traits related to amnesic shellfish toxin kinetic in five pectinid species

Eline Le Moan , Laure Pecquerie , Laure Régnier-Brisson , Hélène Hégaret , Paulo F Lagos et al.
Ecological Modelling, 2024, 499, ⟨10.1016/j.ecolmodel.2024.110921⟩
Article dans une revue hal-04843558 v1

La mesure de la justice environnementale

Mickaël Lavaine , Fred Jean
Revue juridique de l'environnement, 2024, 49 (913-922)
Article dans une revue hal-04987413 v1
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Reproduction patterns of the bloody cockle Senilia senilis (Linnaeus 1758) in the Sine-Saloum inverse estuary

Babacar Sané , Malick Diouf , Frédéric Jean , Jonathan Flye-Sainte-Marie , Malika Kerhervé et al.
Aquatic Living Resources, 2023, 36, pp.33. ⟨10.1051/alr/2023029⟩
Article dans une revue hal-04372964 v1
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High-Resolution Drone Images Show That the Distribution of Mussels Depends on Microhabitat Features of Intertidal Rocky Shores

Romina Vanessa Barbosa , Marion Jaud , Cédric Bacher , Yann Kerjean , Fred Jean et al.
Remote Sensing, 2022, 14 (21), pp.5441. ⟨10.3390/rs14215441⟩
Article dans une revue hal-03836423 v1
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Size‐based survival of cultured Argopecten purpuratus (L, 1819) under severe hypoxia

Rosa Cueto‐vega , Jonathan Flye-Sainte-Marie , Arturo Aguirre‐velarde , Fred Jean , Patricia Gil‐kodaka et al.
Journal of the World Aquaculture Society, 2022, 53 (1), pp.151-173. ⟨10.1111/jwas.12777⟩
Article dans une revue insu-03457249 v1
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Physiological and comparative proteomic analyzes reveal immune defense response of the king scallop Pecten maximus in presence of paralytic shellfish toxin (PST) from Alexandrium minutum

Yasmine Even , Emilien Pousse , Coraline Chapperon , Sébastien Artigaud , Hélène Hégaret et al.
Harmful Algae, 2022, 115, pp.102231. ⟨10.1016/j.hal.2022.102231⟩
Article dans une revue hal-03723474 v1
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Revealing perturbation responses with limited observations of biological communities

Nikolaos Alexandridis , Cédric Bacher , Fred Jean , Jeffrey Dambacher
Ecological Indicators, 2021, 128, pp.107840. ⟨10.1016/j.ecolind.2021.107840⟩
Article dans une revue hal-03323984 v1
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Linking individual and population patterns of rocky-shore mussels

Romina Vanessa Barbosa , Fred Jean , Cédric Bacher , Yoann Thomas
PeerJ, 2021, 9, pp.e12550. ⟨10.7717/peerj.12550⟩
Article dans une revue hal-03836433 v1
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Reconstructing physiological history from growth, a method to invert DEB models

Romain Lavaud , Eric Rannou , Jonathan Flye-Sainte-Marie , Fred Jean
Journal of Sea Research (JSR), 2019, 143, pp.183-192. ⟨10.1016/j.seares.2018.07.007⟩
Article dans une revue hal-02114581 v1
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Chronic and severe hypoxic conditions in Paracas Bay, Pisco, Peru: Consequences on scallop growth, reproduction, and survival

Arturo Aguirre-Velarde , Gérard Thouzeau , Fred Jean , Jaime Mendo , Rosa Cueto-Vega et al.
Aquaculture, 2019, 512, pp.734259. ⟨10.1016/j.aquaculture.2019.734259⟩
Article dans une revue hal-02405983 v1
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Predicting the energy budget of the scallop Argopecten purpuratus in an oxygen–limiting environment

Arturo Aguirre-Velarde , Laure Pecquerie , Fred Jean , Gérard Thouzeau , Jonathan Flye-Sainte-Marie
Journal of Sea Research (JSR), 2019, 143, pp.254-261. ⟨10.1016/j.seares.2018.09.011⟩
Article dans une revue hal-02114544 v1
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What can the shell tell about the scallop? Using growth trajectories along latitudinal and bathymetric gradients to reconstruct physiological history with DEB theory

Romain Lavaud , Aurelie Jolivet , Eric Rannou , Fred Jean , Oivind Strand et al.
Journal of Sea Research (JSR), 2019, 143, pp.193-206. ⟨10.1016/j.seares.2018.04.001⟩
Article dans une revue hal-02871386 v1
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Modelling paralytic shellfish toxins (PST) accumulation in Crassostrea gigas by using Dynamic Energy Budgets (DEB)

Emilien Pousse , Jonathan Flye-Sainte-Marie , Marianne Alunno-Bruscia , Helene Hegaret , Eric Rannou et al.
Journal of Sea Research (JSR), 2019, 143, pp.152-164. ⟨10.1016/j.seares.2018.09.002⟩
Article dans une revue hal-02114653 v1
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Individual-based simulation of the spatial and temporal dynamics of macroinvertebrate functional groups provides insights into benthic community assembly mechanisms

Nikolaos Alexandridis , Cédric Bacher , Nicolas Desroy , Fred Jean
PeerJ, 2018, 6, pp.e5038. ⟨10.7717/peerj.5038⟩
Article dans une revue hal-02614270 v1
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New insights into the seasonal feeding ecology of Pecten maximus using pigments, fatty acids and sterols analyses

Romain Lavaud , Sébastien Artigaud , Fabienne Le Grand , Anne Donval , Philippe Soudant et al.
Marine Ecology Progress Series, 2018, 590, pp.109-129. ⟨10.3354/meps12476⟩
Article dans une revue hal-02324241 v1

Feeding behaviour and growth of the Peruvian scallop ( Argopecten purpuratus ) under daily cyclic hypoxia conditions

Arturo Aguirre-Velarde , Fred Jean , Gérard Thouzeau , Jonathan Flye-Sainte-Marie
Journal of Sea Research (JSR), 2018, 131, pp.85-94. ⟨10.1016/j.seares.2017.11.001⟩
Article dans une revue hal-02405958 v1
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The Impossible Sustainability of the Bay of Brest? Fifty Years of Ecosystem Changes, Interdisciplinary Knowledge Construction and Key Questions at the Science-Policy-Community Interface

Olivier Ragueneau , Mélanie Raimonet , Camille Mazé , Jennifer Coston-Guarini , Laurent Chauvaud et al.
Frontiers in Marine Science, 2018, 5, ⟨10.3389/fmars.2018.00124⟩
Article dans une revue hal-01769744 v1
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Sources of paralytic shellfish toxin accumulation variability in the Pacific oyster Crassostrea gigas

Emilien Pousse , Jonathan Flye-Sainte-Marie , Marianne Alunno-Bruscia , Helene Hegaret , Frédéric Jean
Toxicon, 2018, 144, pp.14-22. ⟨10.1016/j.toxicon.2017.12.050⟩
Article dans une revue hal-02324600 v1
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Building functional groups of marine benthic macroinvertebrates on the basis of general community assembly mechanisms

Nikolaos Alexandridis , Cédric Bacher , Nicolas Desroy , Fred Jean
Journal of Sea Research (JSR), 2017, 121, pp.59-70. ⟨10.1016/j.seares.2017.01.007⟩
Article dans une revue hal-01510353 v1
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A coupled biophysical model for the distribution of the great scallop Pecten maximus in the English Channel

Clément Le Goff , Romain Lavaud , Philippe Cugier , Fred Jean , Jonathan Flye-Sainte-Marie et al.
Journal of Marine Systems, 2017, 167, pp.55-67. ⟨10.1016/j.jmarsys.2016.10.013⟩
Article dans une revue hal-01394278 v1
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Qualitative modelling of functional relationships in marine benthic communities

Nikolaos Alexandridis , Jeffrey M. Dambacher , Fred Jean , Nicolas Desroy , Cédric Bacher
Ecological Modelling, 2017, 360, pp.300-312. ⟨10.1016/j.ecolmodel.2017.07.021⟩
Article dans une revue hal-02571120 v1
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Effects of progressive hypoxia on oxygen uptake in juveniles of the Peruvian scallop, Argopecten purpuratus (Lamarck, 1819)

Arturo Aguirre-Velarde , Fred Jean , Gérard Thouzeau , Jonathan Flye-Sainte-Marie
Aquaculture, 2016, 451, pp.385-389. ⟨10.1016/j.aquaculture.2015.07.030⟩
Article dans une revue hal-01282771 v1
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Reproductive strategy of the invasive green mussel may result in increased competition with native fauna in the southeastern United States

Katherine K Mcfarland , Philippe Soudant , Fred Jean , Aswani K Volety
Aquatic Invasions, 2016, 11 (4), pp.411-423. ⟨10.3391/ai.2016.11.4.06⟩
Article dans une revue hal-01395750 v1
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Potential impacts of blooms of the toxic dinoflagellate Karenia brevis on the growth, survival and juvenile recruitment of the non-native green mussel Perna viridis in southeastern United States

Katherine Mcfarland , Fred Jean , Julien Thébault , Aswani K Volety
Toxicon, 2016, 109, pp.94-102. ⟨10.1016/j.toxicon.2015.11.017⟩
Article dans une revue hal-01239448 v1
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Sclerochronological records and daily microgrowth of the Peruvian scallop (Argopecten purpuratus, Lamarck, 1819) related to environmental conditions in Paracas Bay, Pisco, Peru

Arturo Aguirre-Velarde , Jonathan Flye-Sainte-Marie , Jaime Mendo , Fred Jean
Journal of Sea Research (JSR), 2015, 99, pp.1-8. ⟨10.1016/j.seares.2015.01.002⟩
Article dans une revue hal-01145400 v1
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Coupling experimental and field-based approaches to decipher carbon sources in the shell of the great scallop, Pecten maximus (L.)

V Marchais , J Richard , A Jolivet , Jonathan Flye-Sainte-Marie , Julien Thébault et al.
Geochimica et Cosmochimica Acta, 2015, 168, pp.58-69. ⟨10.1016/j.gca.2015.07.010⟩
Article dans une revue hal-01211666 v1
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Uptake and elimination of brevetoxin in the invasive green mussel, Perna viridis, during natural Karenia brevis blooms in southwest Florida

Katherine Mcfarland , Fred Jean , Philippe Soudant , Aswani K. Volety
Toxicon, 2015, 97, pp.46-52. ⟨10.1016/j.toxicon.2015.02.005⟩
Article dans une revue hal-01145560 v1

Deciphering the molecular adaptation of the king scallop (Pecten maximus) to heat stress using transcriptomics and proteomics

Sébastien Artigaud , Joëlle Richard , Michael As Thorne , Romain Lavaud , Jonathan Flye-Sainte-Marie et al.
BMC Genomics, 2015, 16, pp.988. ⟨10.1186/s12864-015-2132-x⟩
Article dans une revue hal-02552404 v1

Proteomic-based comparison between populations of the Great Scallop, Pecten maximus.

Sébastien Artigaud , Romain Lavaud , Julien Thébault , Fred Jean , Oivind Strand et al.
Journal of Proteomics, 2014, 105, pp.164-73. ⟨10.1016/j.jprot.2014.03.026⟩
Article dans une revue hal-01022851 v1
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A theoretical individual-based model of Brown Ring Disease in Manila clams, <i>Venerupis philippinarum</i>

Christine Paillard , Fred Jean , Susan E. Ford , Eric N. Powell , John Klinck et al.
Journal of Sea Research (JSR), 2014, 91, pp.15-34. ⟨10.1016/j.seares.2014.03.005⟩
Article dans une revue hal-01056541 v1
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Feeding and energetics of the great scallop, Pecten maximus, through a DEB model

Romain Lavaud , Jonathan Flye-Sainte-Marie , Fred Jean , Antoine Emmery , Oivind Strand et al.
Journal of Sea Research (JSR), 2014, 94, pp.5 - 18. ⟨10.1016/j.seares.2013.10.011⟩
Article dans une revue hal-00917710 v1

Deep sequencing of the mantle transcriptome of the great scallop Pecten maximus.

Sébastien Artigaud , Michael a S Thorne , Joëlle Richard , Romain Lavaud , Fred Jean et al.
Marine Genomics, 2014, 15, pp.3-4. ⟨10.1016/j.margen.2014.03.006⟩
Article dans une revue hal-01022918 v1
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Handling enhances the development of brown ring disease signs in Ruditapes philippinarum

Fred Jean , Jonathan Flye-Sainte-Marie , Clémence Oudard , Christine Paillard
Journal of Shellfish Research, 2011, 30 (1), pp.13-15. ⟨10.2983/035.030.0103⟩
Article dans une revue hal-00568169 v2

A quantitative estimation of the energetic cost of brown ring disease in the Manila clam using Dynamic Energy Budget theory

Jonathan Flye-Sainte-Marie , Fred Jean , Christine Paillard , Sebastian, A.L.M. Kooijman
Journal of Sea Research (JSR), 2009, 62 (2-3), pp.114-123. ⟨10.1016/j.seares.2009.01.007⟩
Article dans une revue hal-00461368 v1

Diurnal heterogeneity in silicic acid fluxes in shallow coastal sites: Causes and implications

Sorcha Ni Longphuirt , Olivier Ragueneau , Laurent Chauvaud , Sophie Martin , Fred Jean et al.
Estuarine, Coastal and Shelf Science, 2009, 82 (3), pp.495-502. ⟨10.1016/j.ecss.2009.02.014⟩
Article dans une revue istex hal-00455595 v1
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Variability of the hemocyte parameters of Ruditapes philippinarum in the field during an annual cycle

Jonathan Flye-Sainte-Marie , Philippe Soudant , Christophe Lambert , Nelly Le Goïc , Madeleine Goncalvez et al.
Journal of Experimental Marine Biology and Ecology, 2009, 377 (1), pp.1-11. ⟨10.1016/j.jembe.2009.06.003⟩
Article dans une revue hal-00452255 v1
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Effect of sediment grain-size on development of brown ring disease in the Manila clam Ruditapes philippinarum

Jonathan Flye-Sainte-Marie , Fred Jean , Susan Ford , Christine Paillard
Aquaculture, 2008, 278 (1-4), pp.184-187. ⟨10.1016/j.aquaculture.2008.03.013⟩
Article dans une revue hal-00452260 v1
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Impact of Brown Ring Disease on the energy budget of the Manila clam Ruditapes philippinarum

Jonathan Flye-Sainte-Marie , Stéphane Pouvreau , Christine Paillard , Fred Jean
Journal of Experimental Marine Biology and Ecology, 2007, 349 (2), pp.378-389. ⟨10.1016/j.jembe.2007.05.029⟩
Article dans une revue hal-00452254 v1
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Ecophysiological dynamic model of individual growth of Ruditapes philippinarum

Jonathan Flye-Sainte-Marie , Fred Jean , Christine Paillard , Susan Ford , Eric Powell et al.
Aquaculture, 2007, 266 (1-4), pp.130-143. ⟨10.1016/j.aquaculture.2007.02.017⟩
Article dans une revue hal-00452257 v1

Biological control of trace metal and organometal benthic fluxes in a eutrophic lagoon (Thau Lagoon, Mediterranean Sea, France)

D. Point , Mathilde Monperrus , Emmanuel Tessier , David Amouroux , Laurent Chauvaud et al.
Estuarine, Coastal and Shelf Science, 2007, 72 (3), pp.457-471. ⟨10.1016/j.ecss.2006.11.013⟩
Article dans une revue istex hal-00460083 v1

Benthic O2 distribution and dynamics in a Mediterranean lagoon (Thau, France): An in situ microelectrode study

K. Dedieu , C. Rabouille , Gérard Thouzeau , F. Jean , Laurent Chauvaud et al.
Estuarine, Coastal and Shelf Science, 2007, 72, pp.393-405. ⟨10.1016/j.ecss.2006.11.010⟩
Article dans une revue istex hal-00203159 v1

Grazing-induced changes in cell wall silicification in a marine diatom

Philippe Pondaven , Morgane Gallinari , Sophie Chollet , Eva Bucciarelli , Géraldine Sarthou et al.
Protist, 2007, 158 (1), pp.21-28. ⟨10.1016/j.protis.2006.09.002⟩
Article dans une revue istex hal-00472048 v1

Benthic community respiration in areas impacted by the invasive mollusk, Crepidula fornicata L.

S. Martin , Gérard Thouzeau , Murielle Richard , Laurent Chauvaud , F. Jean et al.
Marine Ecology Progress Series, 2007, 347, pp.51-60
Article dans une revue hal-00524678 v1

Benthic O2 distribution and dynamics in a Mediterranean lagoon: an in situ microelectrode study

K. Dedieu , C. Rabouille , Gérard Thouzeau , F. Jean , Laurent Chauvaud et al.
Estuarine, Coastal and Shelf Science, 2007, 72 (3), pp.393-405
Article dans une revue hal-00524689 v1

Spatial and temporal variability in benthic biogeochemical fluxes in the Thau lagoon associated with macrophytic and macrofaunal distribution

Gérard Thouzeau , J. Grall , Jacques Clavier , Laurent Chauvaud , F. Jean et al.
Estuarine, Coastal and Shelf Science, 2007, 72 (3), pp.432-447
Article dans une revue hal-00524693 v1

Respiration, calcification and excretion of the invasive limpet, Crepidula fornicata L.: implications for carbon carbonate and nitrogen fluxes

S. Martin , Gérard Thouzeau , Laurent Chauvaud , F. Jean , L. Guérin et al.
Limnology and Oceanography, 2006, 51 (5), pp.1996-2007
Article dans une revue hal-00524728 v1

Comparison of Zostera marina and maerl community metabolism

Sophie Martin , Jacques Clavier , Jean-Marc Guarini , Laurent Chauvaud , Christian Hily et al.
Aquatic Botany, 2005, 83, pp.161-174
Article dans une revue hal-00091287 v1
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Hemocyte characteristics in families of oysters, Crassostrea gigas, selected for differential survival during summer and reared in three sites

Christophe Lambert , Philippe Soudant , Lionel Dégremont , Maryse Delaporte , Jeanne Moal et al.
Aquaculture, 2005, 270, pp.276-288
Article dans une revue hal-00616866 v1

Biodeposition by an invasive suspension feeder impacts the biogeochemical cycle of Si in a coastal ecosystem (Bay of Brest, France)

Olivier Ragueneau , Laurent Chauvaud , Brivaëla Moriceau , Aude Leynaert , Gérard Thouzeau et al.
Biogeochemistry, 2005, 75 (1), pp.19-41
Article dans une revue hal-00524731 v1
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The shell of the Great Scallop Pecten maximus as a high frequency archive of paleoenvironmental change

Laurent Chauvaud , Anne Lorrain , Robert B. Dunbar , Yves-Marie Paulet , Gérard Thouzeau et al.
Geochemistry, Geophysics, Geosystems, 2005, 6 (8), pp.1-15. ⟨10.1029/2004GC000890⟩
Article dans une revue hal-00452414 v1

Direct evidence of a biologically active coastal silicate pump: Ecological implications

Olivier Ragueneau , Laurent Chauvaud , Aude Leynaert , Gérard Thouzeau , Yves-Marie Paulet et al.
Limnology and Oceanography, 2002, 47 (6), pp.1849-1854. ⟨10.4319/lo.2002.47.6.1849⟩
Article dans une revue hal-00959802 v1
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Long-term variation of the Bay of Brest ecosystem: benthic-pelagic coupling revisited

Laurent Chauvaud , F. Jean , Olivier Ragueneau , Gérard Thouzeau
Marine Ecology Progress Series, 2000, 200, pp.35-48
Article dans une revue hal-00524757 v1

Estimate of state variables of a trophic web model in the Bay of Brest

F. Jean , Gérard Thouzeau
Comptes rendus de l’Académie des sciences. Série III, Sciences de la vie, 1995, 318, pp.145-154
Article dans une revue hal-00524774 v1

Quantitative sampling of soft-bottom macroepifauna for assessing the benthic system in the Bay of Brest (France)

Frédéric Jean , Christian Hily
Oceanologica Acta, 1994, 17 (3), pp.319-330
Article dans une revue hal-00568533 v1

Linking life traits and Dynamic Energy Budget parameters to better understand domoic acid contamination in five pectinid species.

Eline Le Moan , Laure Pecquerie , Helene Hegaret , Paulo Lagos , Léo Heyer et al.
23rd International Pectinid Workshop, Apr 2024, Douglas, Isle of Man
Communication dans un congrès hal-04668517 v1

Comparing two pectinid species as a fast and a slow depurators of amnesic shellfish toxin through a modelling approach

Eline Le Moan , Laure Régnier-Brisson , Laure Pecquerie , Caroline Fabioux , Fred Jean et al.
Conférence annuelle GdR Phycotox - GIS Cyanobactéries 2023, May 2023, Nantes, France
Communication dans un congrès hal-04180049 v1

Reconstructing the growth and feeding of the scallop Mimachlamys varia: a DEB application

Laure Régnier-Brisson , Eline Le Moan , Thomas Guyondet , Laure Pecquerie , Philippe Cugier et al.
8th International Symposium on Dynamic Energy Budget Theory for Metabolic Organization, Jun 2023, Baton-Rouge, United States
Communication dans un congrès hal-04179984 v1

The impossible sustainability of the Bay of Brest? 40 years of ecosystem evolution, interdisciplinary knowledge construction and key questions at the science-policy-communities interface

Olivier Ragueneau , Mélanie Raimonet , Camille Mazé , Jennifer Coston-Guarini , Anatole Danto et al.
International Long Term Ecological Research Network & LTER-France (Zones Ateliers Network & Critical Zone Observatories) joint conference, LTER-France - Zones Ateliers Network & Critical Zone Observatories, Oct 2017, Nantes, France
Communication dans un congrès hal-02502083 v1

Commande optimale en temps et en énergie d’un procédé biologique d’épuration de l’eau

Walid Bouhafs , Nahla Abdellatif , Frédéric Jean , Jérôme Harmand
International Joint Conference CB-WR-MED Conference/ 2nd AOP’ Tunisia Conference for Sustainable Water Management, Apr 2013, Tunis, Tunisie
Communication dans un congrès hal-02744396 v1

Impact of Measurement geometry on quantitative characterization of sediment with high-resolution sub-bottom profiling systems (kHz-15kHz)

Sandrine Rakotonarivo , Michel Legris , R. Desmare , F. Jean
Caractérisation du milieu marin, address = Brest, France, year = 2006, month = 16-19 October, pdf = 1, nat = 1,, 2006, France. pp.Non renseigne
Communication dans un congrès hal-00518696 v1

Mercury species benthic fluxes measurements in coastal environments as influenced by the biological activity

David Amouroux , Mathilde Monperrus , D. Point , E. Tessier , Laurent Chauvaud et al.
7th International Conference on Mercury as a Global Pollutant, 2004, Ljubljana, France. pp.770-773
Communication dans un congrès hal-00524827 v1

Trophic bioaccumulation of mercury species in macrobenthic organisms from French coastal sites

Mathilde Monperrus , J. Grall , L. Rodriguez , Gérard Thouzeau , F. Jean et al.
7th International Conference on Mercury as a Global Pollutant, 2004, Ljubljana, Slovenia. pp.1226-1230
Communication dans un congrès hal-00524829 v1

Transfer of metallic contaminants at the sediment-water interface in a coastal lagoon: role of the biological and microbial activity

David Amouroux , Mathilde Monperrus , D. Point , Emamnuel Tessier , Gilles Bareille et al.
XIIth international conference on Heavy metals in the environment, ICHMET, May 2003, Grenoble, France. pp.41-44
Communication dans un congrès hal-00524823 v1