Ghislain DURIF

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Publications

The fate of a polygenic phenotype within the genomic landscapes of introgression in the European seabass hybrid zone

Maeva Leitwein , G Durif , E Delpuech , P Gagnaire , B Ernande et al.
Molecular Biology and Evolution, 2024, 41 (9), pp.msae194. ⟨10.1093/molbev/msae194⟩
Journal articles hal-04705605 v1
Image document

Kernel-Based Testing for Single-Cell Differential Analysis

Anthony Ozier-Lafontaine , Camille Fourneaux , Ghislain Durif , Céline Vallot , Olivier Gandrillon et al.
Genome Biology, 2024, 114
Journal articles hal-04214858 v2

A median test for functional data

Zaineb Smida , Lionel Cucala , Ali Gannoun , Ghislain Durif
Journal of Nonparametric Statistics, 2022, 34 (2), pp.520-553. ⟨10.1080/10485252.2022.2064997⟩
Journal articles hal-03658578 v1
Image document

A Wilcoxon-Mann-Whitney spatial scan statistic for functional data

Zaineb Smida , Lionel Cucala , Ali Gannoun , Ghislain Durif
Computational Statistics and Data Analysis, 2022, 167, pp.107378. ⟨10.1016/j.csda.2021.107378⟩
Journal articles hal-03412009 v1
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Noninvasive prenatal diagnosis of genetic diseases induced by triplet repeat expansion by linked read haplotyping and Bayesian approach

Cathy Liautard-Haag , Ghislain Durif , Charles Vangoethem , David Baux , Anaïs Louis et al.
Scientific Reports, 2022, 12 (1), pp.11423. ⟨10.1038/s41598-022-15307-2⟩
Journal articles hal-03716132 v2
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Extending Approximate Bayesian Computation with Supervised Machine Learning to infer demographic history from genetic polymorphisms using DIYABC Random Forest

François‐david Collin , Ghislain Durif , Louis Raynal , Eric Lombaert , Mathieu Gautier et al.
Molecular Ecology Resources, 2021, 21 (8), pp.2598-2613. ⟨10.1111/1755-0998.13413⟩
Journal articles hal-03229207 v1
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Kernel Operations on the GPU, with Autodiff,without Memory Overflows

Benjamin Charlier , Jean Feydy , Joan Glaunès , François-David Collin , Ghislain Durif
Journal of Machine Learning Research, 2021, 22 (74), pp.1-6. ⟨10.48550/arXiv.2004.11127⟩
Journal articles hal-02517462 v2
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Divergent clonal differentiation trajectories establish CD8+ memory T cell heterogeneity during acute viral infections in humans

Jeff Mold , Laurent Modolo , Joanna Hård , Margherita Zamboni , Anton J.M. Larsson et al.
Cell Reports, 2021, 35 (8), pp.109174. ⟨10.1016/j.celrep.2021.109174⟩
Journal articles hal-03345357 v1
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Probabilistic Count Matrix Factorization for Single Cell Expression Data Analysis

Ghislain Durif , Laurent Modolo , Jeff E Mold , Sophie Lambert-Lacroix , Franck Picard
Bioinformatics, 2019, 35, 20, pp.4011-4019. ⟨10.1093/bioinformatics/btz177⟩
Journal articles hal-01649275 v3
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High Dimensional Classification with combined Adaptive Sparse PLS and Logistic Regression

Ghislain Durif , Laurent Modolo , Jakob Michaelsson , Jeff E. Mold , Sophie Lambert-Lacroix et al.
Bioinformatics, 2018, 34 (3), pp.485-493. ⟨10.1093/bioinformatics/btx571⟩
Journal articles hal-01587360 v1
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Nonparametric tests and funStatTest R package for functional data

Zaineb Smida , Lionel Cucala , Ali Gannoun , Ghislain Durif
JDS 2024, Bordeaux, May 2024, Bordeaux, France
Conference papers hal-04579217 v1
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Benchopt: Reproducible, efficient and collaborative optimization benchmarks

Thomas Moreau , Mathurin Massias , Alexandre Gramfort , Pierre Ablin , Pierre-Antoine Bannier et al.
NeurIPS 2022 - 36th Conference on Neural Information Processing Systems, Nov 2022, New Orleans, United States
Conference papers hal-03830604 v1

Using genome-wide ancestry pattern in European sea bass to assess phenotypic variation and ensure sustainable aquaculture

Maeva Leitwein , Ghislain Durif , Pierre-Alexandre Gagnaire , Alain Vergnet , Frédéric Clota et al.
6th Symposium on Genomics in Aquaculture, May 2022, Grenade, Spain
Conference papers hal-04185352 v1
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Statistique de balayage spatial non paramétrique pour données fonctionnelles

Zaineb Smida , Lionel Cucala , Ali Gannoun , Ghislain Durif
forum de jeunes mathématicien.ne.s, Dec 2021, Besançon, France
Conference papers hal-03476841 v1
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Probabilistic Count Matrix Factorization for Single Cell Expression Data Analysis

Ghislain Durif , Laurent Modolo , Jeff E. Mold , Sophie Lambert-Lacroix , Franck Picard
RECOMB 2018 - 22nd Annual International Conference on Research in Computational Molecular Biology, Ecole Polytechnique, Apr 2018, Paris, France. pp.254-255
Conference papers hal-01962030 v1